##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM2598456v1 #!genome-build-accession NCBI_Assembly:GCF_025984565.1 #!annotation-date 11/04/2022 08:16:08 #!annotation-source NCBI RefSeq ##sequence-region NZ_CP087814.1 1 2812574 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=476 NZ_CP087814.1 RefSeq region 1 2812574 . + . ID=NZ_CP087814.1:1..2812574;Dbxref=taxon:476;Is_circular=true;Name=ANONYMOUS;collection-date=2015;country=USA: Nebraska;gbkey=Src;genome=chromosome;mol_type=genomic DNA;nat-host=Bovine;strain=SAM109238 NZ_CP087814.1 RefSeq gene 772 906 . + . ID=gene-LP088_RS00005;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=LP088_RS00005;old_locus_tag=LP088_00005 NZ_CP087814.1 Protein Homology CDS 772 906 . + 0 ID=cds-WP_029103370.1;Parent=gene-LP088_RS00005;Dbxref=Genbank:WP_029103370.1;Name=WP_029103370.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000831329.1;locus_tag=LP088_RS00005;product=50S ribosomal protein L34;protein_id=WP_029103370.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1065 1454 . + . ID=gene-LP088_RS00010;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=LP088_RS00010;old_locus_tag=LP088_00010 NZ_CP087814.1 Protein Homology CDS 1065 1454 . + 0 ID=cds-WP_112742761.1;Parent=gene-LP088_RS00010;Dbxref=Genbank:WP_112742761.1;Name=WP_112742761.1;Ontology_term=GO:0006396,GO:0004526;gbkey=CDS;gene=rnpA;go_function=ribonuclease P activity|0004526||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010197169.1;locus_tag=LP088_RS00010;product=ribonuclease P protein component;protein_id=WP_112742761.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1464 1793 . + . ID=gene-LP088_RS00015;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=LP088_RS00015;old_locus_tag=LP088_00015 NZ_CP087814.1 Protein Homology CDS 1464 1793 . + 0 ID=cds-WP_112742760.1;Parent=gene-LP088_RS00015;Dbxref=Genbank:WP_112742760.1;Name=WP_112742760.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013108284.1;locus_tag=LP088_RS00015;product=membrane protein insertion efficiency factor YidD;protein_id=WP_112742760.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1957 3600 . + . ID=gene-LP088_RS00020;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=LP088_RS00020;old_locus_tag=LP088_00020 NZ_CP087814.1 Protein Homology CDS 1957 3600 . + 0 ID=cds-WP_112742759.1;Parent=gene-LP088_RS00020;Dbxref=Genbank:WP_112742759.1;Name=WP_112742759.1;Ontology_term=GO:0032977,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_function=membrane insertase activity|0032977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011281397.1;locus_tag=LP088_RS00020;product=membrane protein insertase YidC;protein_id=WP_112742759.1;transl_table=11 NZ_CP087814.1 RefSeq gene 3702 5186 . + . ID=gene-LP088_RS00025;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=LP088_RS00025;old_locus_tag=LP088_00025 NZ_CP087814.1 Protein Homology CDS 3702 5186 . + 0 ID=cds-WP_112742850.1;Parent=gene-LP088_RS00025;Dbxref=Genbank:WP_112742850.1;Name=WP_112742850.1;Ontology_term=GO:0006400,GO:0003924,GO:0005515,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,protein binding|0005515||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019672116.1;locus_tag=LP088_RS00025;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_112742850.1;transl_table=11 NZ_CP087814.1 RefSeq gene 5196 5684 . + . ID=gene-LP088_RS00030;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=LP088_RS00030;old_locus_tag=LP088_00030 NZ_CP087814.1 Protein Homology CDS 5196 5684 . + 0 ID=cds-WP_078275083.1;Parent=gene-LP088_RS00030;Dbxref=Genbank:WP_078275083.1;Name=WP_078275083.1;Ontology_term=GO:0006355,GO:0140110;gbkey=CDS;gene=nrdR;go_function=transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011961597.1;locus_tag=LP088_RS00030;product=transcriptional regulator NrdR;protein_id=WP_078275083.1;transl_table=11 NZ_CP087814.1 RefSeq gene 5701 6795 . + . ID=gene-LP088_RS00035;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=LP088_RS00035;old_locus_tag=LP088_00035 NZ_CP087814.1 Protein Homology CDS 5701 6795 . + 0 ID=cds-WP_112742849.1;Parent=gene-LP088_RS00035;Dbxref=Genbank:WP_112742849.1;Name=WP_112742849.1;Ontology_term=GO:0008703,GO:0008835;gbkey=CDS;gene=ribD;go_function=5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519129.1;locus_tag=LP088_RS00035;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_112742849.1;transl_table=11 NZ_CP087814.1 RefSeq gene 7176 7838 . + . ID=gene-LP088_RS00040;Name=LP088_RS00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00040;old_locus_tag=LP088_00040 NZ_CP087814.1 Protein Homology CDS 7176 7838 . + 0 ID=cds-WP_264676057.1;Parent=gene-LP088_RS00040;Dbxref=Genbank:WP_264676057.1;Name=WP_264676057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004997404.1;locus_tag=LP088_RS00040;product=riboflavin synthase;protein_id=WP_264676057.1;transl_table=11 NZ_CP087814.1 RefSeq gene 8008 9009 . + . ID=gene-LP088_RS00045;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=LP088_RS00045;old_locus_tag=LP088_00045 NZ_CP087814.1 Protein Homology CDS 8008 9009 . + 0 ID=cds-WP_078275086.1;Parent=gene-LP088_RS00045;Dbxref=Genbank:WP_078275086.1;Name=WP_078275086.1;Ontology_term=GO:0006431,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519808.1;locus_tag=LP088_RS00045;product=methionyl-tRNA formyltransferase;protein_id=WP_078275086.1;transl_table=11 NZ_CP087814.1 RefSeq gene 9011 10339 . + . ID=gene-LP088_RS00050;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=LP088_RS00050;old_locus_tag=LP088_00050 NZ_CP087814.1 Protein Homology CDS 9011 10339 . + 0 ID=cds-WP_228157730.1;Parent=gene-LP088_RS00050;Dbxref=Genbank:WP_228157730.1;Name=WP_228157730.1;Ontology_term=GO:0001510,GO:0006355,GO:0006364,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003673449.1;locus_tag=LP088_RS00050;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_228157730.1;transl_table=11 NZ_CP087814.1 RefSeq gene 10492 10722 . + . ID=gene-LP088_RS00055;Name=LP088_RS00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00055;old_locus_tag=LP088_00055 NZ_CP087814.1 GeneMarkS-2+ CDS 10492 10722 . + 0 ID=cds-WP_078275087.1;Parent=gene-LP088_RS00055;Dbxref=Genbank:WP_078275087.1;Name=WP_078275087.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS00055;product=hypothetical protein;protein_id=WP_078275087.1;transl_table=11 NZ_CP087814.1 RefSeq gene 10724 11128 . + . ID=gene-LP088_RS00060;Name=LP088_RS00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00060;old_locus_tag=LP088_00060 NZ_CP087814.1 Protein Homology CDS 10724 11128 . + 0 ID=cds-WP_112742757.1;Parent=gene-LP088_RS00060;Dbxref=Genbank:WP_112742757.1;Name=WP_112742757.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013970.2;locus_tag=LP088_RS00060;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_112742757.1;transl_table=11 NZ_CP087814.1 RefSeq gene 11153 12565 . + . ID=gene-LP088_RS00065;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=LP088_RS00065;old_locus_tag=LP088_00065 NZ_CP087814.1 Protein Homology CDS 11153 12565 . + 0 ID=cds-WP_078275089.1;Parent=gene-LP088_RS00065;Dbxref=Genbank:WP_078275089.1;Name=WP_078275089.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003666747.1;locus_tag=LP088_RS00065;product=threonine synthase;protein_id=WP_078275089.1;transl_table=11 NZ_CP087814.1 RefSeq gene 12624 13121 . + . ID=gene-LP088_RS00070;Name=LP088_RS00070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00070;old_locus_tag=LP088_00070 NZ_CP087814.1 GeneMarkS-2+ CDS 12624 13121 . + 0 ID=cds-WP_078275090.1;Parent=gene-LP088_RS00070;Dbxref=Genbank:WP_078275090.1;Name=WP_078275090.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS00070;product=hypothetical protein;protein_id=WP_078275090.1;transl_table=11 NZ_CP087814.1 RefSeq gene 13248 13544 . + . ID=gene-LP088_RS00075;Name=LP088_RS00075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00075;old_locus_tag=LP088_00075 NZ_CP087814.1 GeneMarkS-2+ CDS 13248 13544 . + 0 ID=cds-WP_112742756.1;Parent=gene-LP088_RS00075;Dbxref=Genbank:WP_112742756.1;Name=WP_112742756.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS00075;product=hypothetical protein;protein_id=WP_112742756.1;transl_table=11 NZ_CP087814.1 RefSeq gene 14007 15095 . + . ID=gene-LP088_RS00080;Name=LP088_RS00080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00080;old_locus_tag=LP088_00080 NZ_CP087814.1 Protein Homology CDS 14007 15095 . + 0 ID=cds-WP_078275092.1;Parent=gene-LP088_RS00080;Dbxref=Genbank:WP_078275092.1;Name=WP_078275092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010197181.1;locus_tag=LP088_RS00080;product=LysM peptidoglycan-binding domain-containing protein;protein_id=WP_078275092.1;transl_table=11 NZ_CP087814.1 RefSeq gene 15227 16384 . + . ID=gene-LP088_RS00085;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=LP088_RS00085;old_locus_tag=LP088_00085 NZ_CP087814.1 Protein Homology CDS 15227 16384 . + 0 ID=cds-WP_112742755.1;Parent=gene-LP088_RS00085;Dbxref=Genbank:WP_112742755.1;Name=WP_112742755.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013108277.1;locus_tag=LP088_RS00085;product=DNA-processing protein DprA;protein_id=WP_112742755.1;transl_table=11 NZ_CP087814.1 RefSeq gene 16371 16979 . + . ID=gene-LP088_RS00090;Name=LP088_RS00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00090;old_locus_tag=LP088_00090 NZ_CP087814.1 Protein Homology CDS 16371 16979 . + 0 ID=cds-WP_112742754.1;Parent=gene-LP088_RS00090;Dbxref=Genbank:WP_112742754.1;Name=WP_112742754.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013468.2;locus_tag=LP088_RS00090;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_112742754.1;transl_table=11 NZ_CP087814.1 RefSeq gene 17045 17227 . - . ID=gene-LP088_RS00095;Name=LP088_RS00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00095;old_locus_tag=LP088_00095 NZ_CP087814.1 Protein Homology CDS 17045 17227 . - 0 ID=cds-WP_078275095.1;Parent=gene-LP088_RS00095;Dbxref=Genbank:WP_078275095.1;Name=WP_078275095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007115860.1;locus_tag=LP088_RS00095;product=hypothetical protein;protein_id=WP_078275095.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 17963 18753 . - . ID=gene-LP088_RS00100;Name=LP088_RS00100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS00100;old_locus_tag=LP088_00100;pseudo=true NZ_CP087814.1 Protein Homology CDS 17963 18753 . - 0 ID=cds-LP088_RS00100;Parent=gene-LP088_RS00100;Note=programmed frameshift%3B internal stop;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105201.1;locus_tag=LP088_RS00100;product=transposase;pseudo=true;transl_table=11 NZ_CP087814.1 RefSeq gene 19022 20593 . + . ID=gene-LP088_RS00105;Name=LP088_RS00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00105;old_locus_tag=LP088_00105 NZ_CP087814.1 Protein Homology CDS 19022 20593 . + 0 ID=cds-WP_112742753.1;Parent=gene-LP088_RS00105;Dbxref=Genbank:WP_112742753.1;Name=WP_112742753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657756.1;locus_tag=LP088_RS00105;product=AbgT family transporter;protein_id=WP_112742753.1;transl_table=11 NZ_CP087814.1 RefSeq gene 20912 21001 . + . ID=gene-LP088_RS00110;Name=LP088_RS00110;gbkey=Gene;gene_biotype=tRNA;locus_tag=LP088_RS00110;old_locus_tag=LP088_00110 NZ_CP087814.1 tRNAscan-SE tRNA 20912 21001 . + . ID=rna-LP088_RS00110;Parent=gene-LP088_RS00110;anticodon=(pos:20946..20948);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS00110;product=tRNA-Ser NZ_CP087814.1 tRNAscan-SE exon 20912 21001 . + . ID=exon-LP088_RS00110-1;Parent=rna-LP088_RS00110;anticodon=(pos:20946..20948);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS00110;product=tRNA-Ser NZ_CP087814.1 RefSeq gene 21105 21181 . + . ID=gene-LP088_RS00115;Name=LP088_RS00115;gbkey=Gene;gene_biotype=tRNA;locus_tag=LP088_RS00115;old_locus_tag=LP088_00115 NZ_CP087814.1 tRNAscan-SE tRNA 21105 21181 . + . ID=rna-LP088_RS00115;Parent=gene-LP088_RS00115;anticodon=(pos:21139..21141);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS00115;product=tRNA-Arg NZ_CP087814.1 tRNAscan-SE exon 21105 21181 . + . ID=exon-LP088_RS00115-1;Parent=rna-LP088_RS00115;anticodon=(pos:21139..21141);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS00115;product=tRNA-Arg NZ_CP087814.1 RefSeq gene 21620 22291 . + . ID=gene-LP088_RS00120;Name=LP088_RS00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00120;old_locus_tag=LP088_00120 NZ_CP087814.1 Protein Homology CDS 21620 22291 . + 0 ID=cds-WP_162860457.1;Parent=gene-LP088_RS00120;Dbxref=Genbank:WP_162860457.1;Name=WP_162860457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007117144.1;locus_tag=LP088_RS00120;product=RDD family protein;protein_id=WP_162860457.1;transl_table=11 NZ_CP087814.1 RefSeq gene 22452 22859 . - . ID=gene-LP088_RS00125;Name=LP088_RS00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00125;old_locus_tag=LP088_00125 NZ_CP087814.1 Protein Homology CDS 22452 22859 . - 0 ID=cds-WP_078274233.1;Parent=gene-LP088_RS00125;Dbxref=Genbank:WP_078274233.1;Name=WP_078274233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279648.1;locus_tag=LP088_RS00125;product=hypothetical protein;protein_id=WP_078274233.1;transl_table=11 NZ_CP087814.1 RefSeq gene 23056 23895 . - . ID=gene-LP088_RS00130;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=LP088_RS00130;old_locus_tag=LP088_00130 NZ_CP087814.1 Protein Homology CDS 23056 23895 . - 0 ID=cds-WP_078274234.1;Parent=gene-LP088_RS00130;Dbxref=Genbank:WP_078274234.1;Name=WP_078274234.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011959670.1;locus_tag=LP088_RS00130;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WP_078274234.1;transl_table=11 NZ_CP087814.1 RefSeq gene 24150 24296 . + . ID=gene-LP088_RS00135;Name=LP088_RS00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00135;old_locus_tag=LP088_00135 NZ_CP087814.1 GeneMarkS-2+ CDS 24150 24296 . + 0 ID=cds-WP_158079655.1;Parent=gene-LP088_RS00135;Dbxref=Genbank:WP_158079655.1;Name=WP_158079655.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS00135;product=hypothetical protein;protein_id=WP_158079655.1;transl_table=11 NZ_CP087814.1 RefSeq gene 24302 24571 . + . ID=gene-LP088_RS00140;Name=LP088_RS00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00140;old_locus_tag=LP088_00140 NZ_CP087814.1 GeneMarkS-2+ CDS 24302 24571 . + 0 ID=cds-WP_147287300.1;Parent=gene-LP088_RS00140;Dbxref=Genbank:WP_147287300.1;Name=WP_147287300.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS00140;product=hypothetical protein;protein_id=WP_147287300.1;transl_table=11 NZ_CP087814.1 RefSeq gene 24721 25179 . + . ID=gene-LP088_RS00145;Name=LP088_RS00145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00145;old_locus_tag=LP088_00145 NZ_CP087814.1 GeneMarkS-2+ CDS 24721 25179 . + 0 ID=cds-WP_115368856.1;Parent=gene-LP088_RS00145;Dbxref=Genbank:WP_115368856.1;Name=WP_115368856.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS00145;product=hypothetical protein;protein_id=WP_115368856.1;transl_table=11 NZ_CP087814.1 RefSeq gene 25282 26943 . + . ID=gene-LP088_RS00150;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=LP088_RS00150;old_locus_tag=LP088_00150 NZ_CP087814.1 Protein Homology CDS 25282 26943 . + 0 ID=cds-WP_078274237.1;Parent=gene-LP088_RS00150;Dbxref=Genbank:WP_078274237.1;Name=WP_078274237.1;Ontology_term=GO:0045900,GO:0005524;gbkey=CDS;gene=ettA;go_function=ATP binding|0005524||IEA;go_process=negative regulation of translational elongation|0045900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004974427.1;locus_tag=LP088_RS00150;product=energy-dependent translational throttle protein EttA;protein_id=WP_078274237.1;transl_table=11 NZ_CP087814.1 RefSeq gene 27013 28164 . + . ID=gene-LP088_RS00155;Name=LP088_RS00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00155;old_locus_tag=LP088_00155 NZ_CP087814.1 GeneMarkS-2+ CDS 27013 28164 . + 0 ID=cds-WP_078274238.1;Parent=gene-LP088_RS00155;Dbxref=Genbank:WP_078274238.1;Name=WP_078274238.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS00155;product=hypothetical protein;protein_id=WP_078274238.1;transl_table=11 NZ_CP087814.1 RefSeq gene 28344 28856 . + . ID=gene-LP088_RS00160;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=LP088_RS00160;old_locus_tag=LP088_00160 NZ_CP087814.1 Protein Homology CDS 28344 28856 . + 0 ID=cds-WP_078274260.1;Parent=gene-LP088_RS00160;Dbxref=Genbank:WP_078274260.1;Name=WP_078274260.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005094528.1;locus_tag=LP088_RS00160;product=peptide deformylase;protein_id=WP_078274260.1;transl_table=11 NZ_CP087814.1 RefSeq gene 28939 29685 . - . ID=gene-LP088_RS00165;Name=ompR;gbkey=Gene;gene=ompR;gene_biotype=protein_coding;locus_tag=LP088_RS00165;old_locus_tag=LP088_00165 NZ_CP087814.1 Protein Homology CDS 28939 29685 . - 0 ID=cds-WP_078274239.1;Parent=gene-LP088_RS00165;Dbxref=Genbank:WP_078274239.1;Name=WP_078274239.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=ompR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003096259.1;locus_tag=LP088_RS00165;product=two-component system response regulator OmpR;protein_id=WP_078274239.1;transl_table=11 NZ_CP087814.1 RefSeq gene 30023 30298 . + . ID=gene-LP088_RS00170;Name=LP088_RS00170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00170;old_locus_tag=LP088_00170 NZ_CP087814.1 Protein Homology CDS 30023 30298 . + 0 ID=cds-WP_078274240.1;Parent=gene-LP088_RS00170;Dbxref=Genbank:WP_078274240.1;Name=WP_078274240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007117347.1;locus_tag=LP088_RS00170;product=N-acetyltransferase;protein_id=WP_078274240.1;transl_table=11 NZ_CP087814.1 RefSeq gene 30421 30723 . + . ID=gene-LP088_RS00175;Name=LP088_RS00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00175;old_locus_tag=LP088_00175 NZ_CP087814.1 Protein Homology CDS 30421 30723 . + 0 ID=cds-WP_078274241.1;Parent=gene-LP088_RS00175;Dbxref=Genbank:WP_078274241.1;Name=WP_078274241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657103.1;locus_tag=LP088_RS00175;product=4a-hydroxytetrahydrobiopterin dehydratase;protein_id=WP_078274241.1;transl_table=11 NZ_CP087814.1 RefSeq gene 31057 32166 . + . ID=gene-LP088_RS00180;Name=LP088_RS00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00180;old_locus_tag=LP088_00180 NZ_CP087814.1 Protein Homology CDS 31057 32166 . + 0 ID=cds-WP_078274242.1;Parent=gene-LP088_RS00180;Dbxref=Genbank:WP_078274242.1;Name=WP_078274242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279392.1;locus_tag=LP088_RS00180;product=hypothetical protein;protein_id=WP_078274242.1;transl_table=11 NZ_CP087814.1 RefSeq gene 32299 33375 . + . ID=gene-LP088_RS00185;Name=mltG;gbkey=Gene;gene=mltG;gene_biotype=protein_coding;locus_tag=LP088_RS00185;old_locus_tag=LP088_00185 NZ_CP087814.1 Protein Homology CDS 32299 33375 . + 0 ID=cds-WP_078274243.1;Parent=gene-LP088_RS00185;Dbxref=Genbank:WP_078274243.1;Name=WP_078274243.1;Ontology_term=GO:0009252,GO:0071555,GO:0008932;gbkey=CDS;gene=mltG;go_function=lytic endotransglycosylase activity|0008932||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003665870.1;locus_tag=LP088_RS00185;product=endolytic transglycosylase MltG;protein_id=WP_078274243.1;transl_table=11 NZ_CP087814.1 RefSeq gene 33378 34013 . + . ID=gene-LP088_RS00190;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=LP088_RS00190;old_locus_tag=LP088_00190 NZ_CP087814.1 Protein Homology CDS 33378 34013 . + 0 ID=cds-WP_078274244.1;Parent=gene-LP088_RS00190;Dbxref=Genbank:WP_078274244.1;Name=WP_078274244.1;Ontology_term=GO:0015949,GO:0004798;gbkey=CDS;gene=tmk;go_function=thymidylate kinase activity|0004798||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442531.1;locus_tag=LP088_RS00190;product=dTMP kinase;protein_id=WP_078274244.1;transl_table=11 NZ_CP087814.1 RefSeq gene 34090 34521 . + . ID=gene-LP088_RS00195;Name=LP088_RS00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00195;old_locus_tag=LP088_00195 NZ_CP087814.1 GeneMarkS-2+ CDS 34090 34521 . + 0 ID=cds-WP_078274245.1;Parent=gene-LP088_RS00195;Dbxref=Genbank:WP_078274245.1;Name=WP_078274245.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS00195;product=hypothetical protein;protein_id=WP_078274245.1;transl_table=11 NZ_CP087814.1 RefSeq gene 34534 34908 . + . ID=gene-LP088_RS00200;Name=LP088_RS00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00200;old_locus_tag=LP088_00200 NZ_CP087814.1 GeneMarkS-2+ CDS 34534 34908 . + 0 ID=cds-WP_143821687.1;Parent=gene-LP088_RS00200;Dbxref=Genbank:WP_143821687.1;Name=WP_143821687.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS00200;product=hypothetical protein;protein_id=WP_143821687.1;transl_table=11 NZ_CP087814.1 RefSeq gene 35040 36422 . + . ID=gene-LP088_RS00205;Name=LP088_RS00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00205;old_locus_tag=LP088_00205 NZ_CP087814.1 Protein Homology CDS 35040 36422 . + 0 ID=cds-WP_078274247.1;Parent=gene-LP088_RS00205;Dbxref=Genbank:WP_078274247.1;Name=WP_078274247.1;Ontology_term=GO:0006508,GO:0006950,GO:0004252,GO:0005515,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA,response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011959424.1;locus_tag=LP088_RS00205;product=Do family serine endopeptidase;protein_id=WP_078274247.1;transl_table=11 NZ_CP087814.1 RefSeq gene 36462 36800 . - . ID=gene-LP088_RS00210;Name=LP088_RS00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00210;old_locus_tag=LP088_00210 NZ_CP087814.1 GeneMarkS-2+ CDS 36462 36800 . - 0 ID=cds-WP_078274248.1;Parent=gene-LP088_RS00210;Dbxref=Genbank:WP_078274248.1;Name=WP_078274248.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS00210;product=hypothetical protein;protein_id=WP_078274248.1;transl_table=11 NZ_CP087814.1 RefSeq gene 36775 36906 . - . ID=gene-LP088_RS00215;Name=LP088_RS00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00215 NZ_CP087814.1 GeneMarkS-2+ CDS 36775 36906 . - 0 ID=cds-WP_264676058.1;Parent=gene-LP088_RS00215;Dbxref=Genbank:WP_264676058.1;Name=WP_264676058.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS00215;product=hypothetical protein;protein_id=WP_264676058.1;transl_table=11 NZ_CP087814.1 RefSeq gene 37241 37579 . - . ID=gene-LP088_RS00220;Name=LP088_RS00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00220;old_locus_tag=LP088_00215 NZ_CP087814.1 GeneMarkS-2+ CDS 37241 37579 . - 0 ID=cds-WP_078274249.1;Parent=gene-LP088_RS00220;Dbxref=Genbank:WP_078274249.1;Name=WP_078274249.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS00220;product=hypothetical protein;protein_id=WP_078274249.1;transl_table=11 NZ_CP087814.1 RefSeq gene 38226 39128 . + . ID=gene-LP088_RS00225;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=LP088_RS00225;old_locus_tag=LP088_00220 NZ_CP087814.1 Protein Homology CDS 38226 39128 . + 0 ID=cds-WP_078274250.1;Parent=gene-LP088_RS00225;Dbxref=Genbank:WP_078274250.1;Name=WP_078274250.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196115.1;locus_tag=LP088_RS00225;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_078274250.1;transl_table=11 NZ_CP087814.1 RefSeq gene 39152 39436 . + . ID=gene-LP088_RS00230;Name=LP088_RS00230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00230;old_locus_tag=LP088_00225 NZ_CP087814.1 Protein Homology CDS 39152 39436 . + 0 ID=cds-WP_078274251.1;Parent=gene-LP088_RS00230;Dbxref=Genbank:WP_078274251.1;Name=WP_078274251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003656261.1;locus_tag=LP088_RS00230;product=hypothetical protein;protein_id=WP_078274251.1;transl_table=11 NZ_CP087814.1 RefSeq gene 39531 40244 . + . ID=gene-LP088_RS00235;Name=LP088_RS00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00235;old_locus_tag=LP088_00230 NZ_CP087814.1 Protein Homology CDS 39531 40244 . + 0 ID=cds-WP_078274252.1;Parent=gene-LP088_RS00235;Dbxref=Genbank:WP_078274252.1;Name=WP_078274252.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519239.1;locus_tag=LP088_RS00235;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_078274252.1;transl_table=11 NZ_CP087814.1 RefSeq gene 40614 41564 . + . ID=gene-LP088_RS00240;Name=cas1f;gbkey=Gene;gene=cas1f;gene_biotype=protein_coding;locus_tag=LP088_RS00240;old_locus_tag=LP088_00235 NZ_CP087814.1 Protein Homology CDS 40614 41564 . + 0 ID=cds-WP_078274253.1;Parent=gene-LP088_RS00240;Dbxref=Genbank:WP_078274253.1;Name=WP_078274253.1;Ontology_term=GO:0043571,GO:0004520;gbkey=CDS;gene=cas1f;go_function=endodeoxyribonuclease activity|0004520||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004670426.1;locus_tag=LP088_RS00240;product=type I-F CRISPR-associated endonuclease Cas1f;protein_id=WP_078274253.1;transl_table=11 NZ_CP087814.1 RefSeq gene 41578 44886 . + . ID=gene-LP088_RS00245;Name=cas3f;gbkey=Gene;gene=cas3f;gene_biotype=protein_coding;locus_tag=LP088_RS00245;old_locus_tag=LP088_00240 NZ_CP087814.1 Protein Homology CDS 41578 44886 . + 0 ID=cds-WP_078274254.1;Parent=gene-LP088_RS00245;Dbxref=Genbank:WP_078274254.1;Name=WP_078274254.1;Ontology_term=GO:0043571,GO:0004386;gbkey=CDS;gene=cas3f;go_function=helicase activity|0004386||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: protein motif:HMM:TIGR02562.1;locus_tag=LP088_RS00245;product=type I-F CRISPR-associated helicase Cas3f;protein_id=WP_078274254.1;transl_table=11 NZ_CP087814.1 RefSeq gene 45185 46582 . + . ID=gene-LP088_RS00250;Name=csy1;gbkey=Gene;gene=csy1;gene_biotype=protein_coding;locus_tag=LP088_RS00250;old_locus_tag=LP088_00245 NZ_CP087814.1 Protein Homology CDS 45185 46582 . + 0 ID=cds-WP_078274255.1;Parent=gene-LP088_RS00250;Dbxref=Genbank:WP_078274255.1;Name=WP_078274255.1;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;gene=csy1;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: protein motif:HMM:TIGR02564.1;locus_tag=LP088_RS00250;product=type I-F CRISPR-associated protein Csy1;protein_id=WP_078274255.1;transl_table=11 NZ_CP087814.1 RefSeq gene 46579 47514 . + . ID=gene-LP088_RS00255;Name=csy2;gbkey=Gene;gene=csy2;gene_biotype=protein_coding;locus_tag=LP088_RS00255;old_locus_tag=LP088_00250 NZ_CP087814.1 Protein Homology CDS 46579 47514 . + 0 ID=cds-WP_078274256.1;Parent=gene-LP088_RS00255;Dbxref=Genbank:WP_078274256.1;Name=WP_078274256.1;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;gene=csy2;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201102.1;locus_tag=LP088_RS00255;product=type I-F CRISPR-associated protein Csy2;protein_id=WP_078274256.1;transl_table=11 NZ_CP087814.1 RefSeq gene 47557 48549 . + . ID=gene-LP088_RS00260;Name=csy3;gbkey=Gene;gene=csy3;gene_biotype=protein_coding;locus_tag=LP088_RS00260;old_locus_tag=LP088_00255 NZ_CP087814.1 Protein Homology CDS 47557 48549 . + 0 ID=cds-WP_078274257.1;Parent=gene-LP088_RS00260;Dbxref=Genbank:WP_078274257.1;Name=WP_078274257.1;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;gene=csy3;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003662184.1;locus_tag=LP088_RS00260;product=type I-F CRISPR-associated protein Csy3;protein_id=WP_078274257.1;transl_table=11 NZ_CP087814.1 RefSeq gene 48552 49151 . + . ID=gene-LP088_RS00265;Name=cas6f;gbkey=Gene;gene=cas6f;gene_biotype=protein_coding;locus_tag=LP088_RS00265;old_locus_tag=LP088_00260 NZ_CP087814.1 Protein Homology CDS 48552 49151 . + 0 ID=cds-WP_228157729.1;Parent=gene-LP088_RS00265;Dbxref=Genbank:WP_228157729.1;Name=WP_228157729.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas6f;go_function=endoribonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201099.1;locus_tag=LP088_RS00265;product=type I-F CRISPR-associated endoribonuclease Cas6/Csy4;protein_id=WP_228157729.1;transl_table=11 NZ_CP087814.1 RefSeq direct_repeat 49329 52058 . + . ID=id-NZ_CP087814.1:49329..52058;gbkey=repeat_region;inference=COORDINATES: alignment:pilercr:v1.02;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=49544..49571;rpt_unit_seq=attccacatcgcatagatgacttagaaa NZ_CP087814.1 RefSeq gene 52292 53266 . + . ID=gene-LP088_RS00270;Name=LP088_RS00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00270;old_locus_tag=LP088_00265 NZ_CP087814.1 Protein Homology CDS 52292 53266 . + 0 ID=cds-WP_264676059.1;Parent=gene-LP088_RS00270;Dbxref=Genbank:WP_264676059.1;Name=WP_264676059.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002337518.1;locus_tag=LP088_RS00270;product=IS30 family transposase;protein_id=WP_264676059.1;transl_table=11 NZ_CP087814.1 RefSeq gene 53486 54136 . + . ID=gene-LP088_RS00275;Name=LP088_RS00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00275;old_locus_tag=LP088_00270 NZ_CP087814.1 Protein Homology CDS 53486 54136 . + 0 ID=cds-WP_078274903.1;Parent=gene-LP088_RS00275;Dbxref=Genbank:WP_078274903.1;Name=WP_078274903.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012521.2;locus_tag=LP088_RS00275;product=phosphoglycerate mutase family protein;protein_id=WP_078274903.1;transl_table=11 NZ_CP087814.1 RefSeq gene 54686 57121 . + . ID=gene-LP088_RS00280;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=LP088_RS00280;old_locus_tag=LP088_00275 NZ_CP087814.1 Protein Homology CDS 54686 57121 . + 0 ID=cds-WP_078274901.1;Parent=gene-LP088_RS00280;Dbxref=Genbank:WP_078274901.1;Name=WP_078274901.1;Ontology_term=GO:0006265,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrB;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519092.1;locus_tag=LP088_RS00280;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_078274901.1;transl_table=11 NZ_CP087814.1 RefSeq gene 57240 57800 . + . ID=gene-LP088_RS00285;Name=LP088_RS00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00285;old_locus_tag=LP088_00280 NZ_CP087814.1 GeneMarkS-2+ CDS 57240 57800 . + 0 ID=cds-WP_078274900.1;Parent=gene-LP088_RS00285;Dbxref=Genbank:WP_078274900.1;Name=WP_078274900.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS00285;product=hypothetical protein;protein_id=WP_078274900.1;transl_table=11 NZ_CP087814.1 RefSeq gene 57901 58638 . + . ID=gene-LP088_RS00290;Name=LP088_RS00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00290;old_locus_tag=LP088_00285 NZ_CP087814.1 Protein Homology CDS 57901 58638 . + 0 ID=cds-WP_078274899.1;Parent=gene-LP088_RS00290;Dbxref=Genbank:WP_078274899.1;Name=WP_078274899.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019542.2;locus_tag=LP088_RS00290;product=hypothetical protein;protein_id=WP_078274899.1;transl_table=11 NZ_CP087814.1 RefSeq gene 58679 59284 . + . ID=gene-LP088_RS00295;Name=LP088_RS00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00295;old_locus_tag=LP088_00290 NZ_CP087814.1 Protein Homology CDS 58679 59284 . + 0 ID=cds-WP_078274898.1;Parent=gene-LP088_RS00295;Dbxref=Genbank:WP_078274898.1;Name=WP_078274898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004462542.1;locus_tag=LP088_RS00295;product=2OG-Fe(II) oxygenase;protein_id=WP_078274898.1;transl_table=11 NZ_CP087814.1 RefSeq gene 59316 60185 . + . ID=gene-LP088_RS00300;Name=LP088_RS00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00300;old_locus_tag=LP088_00295 NZ_CP087814.1 Protein Homology CDS 59316 60185 . + 0 ID=cds-WP_078274897.1;Parent=gene-LP088_RS00300;Dbxref=Genbank:WP_078274897.1;Name=WP_078274897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009766935.1;locus_tag=LP088_RS00300;product=DMT family transporter;protein_id=WP_078274897.1;transl_table=11 NZ_CP087814.1 RefSeq gene 60222 61400 . + . ID=gene-LP088_RS00305;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=LP088_RS00305;old_locus_tag=LP088_00300 NZ_CP087814.1 Protein Homology CDS 60222 61400 . + 0 ID=cds-WP_078274896.1;Parent=gene-LP088_RS00305;Dbxref=Genbank:WP_078274896.1;Name=WP_078274896.1;Ontology_term=GO:0009089,GO:0009014;gbkey=CDS;gene=dapE;go_function=succinyl-diaminopimelate desuccinylase activity|0009014||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003656420.1;locus_tag=LP088_RS00305;product=succinyl-diaminopimelate desuccinylase;protein_id=WP_078274896.1;transl_table=11 NZ_CP087814.1 RefSeq gene 61472 63154 . - . ID=gene-LP088_RS00310;Name=LP088_RS00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00310;old_locus_tag=LP088_00305 NZ_CP087814.1 Protein Homology CDS 61472 63154 . - 0 ID=cds-WP_078274895.1;Parent=gene-LP088_RS00310;Dbxref=Genbank:WP_078274895.1;Name=WP_078274895.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012706.2;locus_tag=LP088_RS00310;product=peptide ABC transporter substrate-binding protein;protein_id=WP_078274895.1;transl_table=11 NZ_CP087814.1 RefSeq gene 63288 63599 . - . ID=gene-LP088_RS00315;Name=LP088_RS00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00315;old_locus_tag=LP088_00310 NZ_CP087814.1 Protein Homology CDS 63288 63599 . - 0 ID=cds-WP_078274894.1;Parent=gene-LP088_RS00315;Dbxref=Genbank:WP_078274894.1;Name=WP_078274894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004693851.1;locus_tag=LP088_RS00315;product=NGG1p interacting factor NIF3;protein_id=WP_078274894.1;transl_table=11 NZ_CP087814.1 RefSeq gene 64105 65124 . + . ID=gene-LP088_RS00320;Name=LP088_RS00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00320;old_locus_tag=LP088_00315 NZ_CP087814.1 Protein Homology CDS 64105 65124 . + 0 ID=cds-WP_228157728.1;Parent=gene-LP088_RS00320;Dbxref=Genbank:WP_228157728.1;Name=WP_228157728.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611093.1;locus_tag=LP088_RS00320;product=transposase;protein_id=WP_228157728.1;transl_table=11 NZ_CP087814.1 RefSeq gene 65187 65333 . - . ID=gene-LP088_RS00325;Name=LP088_RS00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00325;old_locus_tag=LP088_00320 NZ_CP087814.1 Protein Homology CDS 65187 65333 . - 0 ID=cds-WP_208624058.1;Parent=gene-LP088_RS00325;Dbxref=Genbank:WP_208624058.1;Name=WP_208624058.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012955.2;locus_tag=LP088_RS00325;product=MBL fold metallo-hydrolase;protein_id=WP_208624058.1;transl_table=11 NZ_CP087814.1 RefSeq gene 65343 65567 . - . ID=gene-LP088_RS00330;Name=LP088_RS00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00330;old_locus_tag=LP088_00325 NZ_CP087814.1 GeneMarkS-2+ CDS 65343 65567 . - 0 ID=cds-WP_208624057.1;Parent=gene-LP088_RS00330;Dbxref=Genbank:WP_208624057.1;Name=WP_208624057.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS00330;product=hypothetical protein;protein_id=WP_208624057.1;transl_table=11 NZ_CP087814.1 RefSeq gene 65712 65996 . + . ID=gene-LP088_RS00335;Name=LP088_RS00335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00335;old_locus_tag=LP088_00330 NZ_CP087814.1 Protein Homology CDS 65712 65996 . + 0 ID=cds-WP_078274892.1;Parent=gene-LP088_RS00335;Dbxref=Genbank:WP_078274892.1;Name=WP_078274892.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022019.2;locus_tag=LP088_RS00335;product=GIY-YIG nuclease family protein;protein_id=WP_078274892.1;transl_table=11 NZ_CP087814.1 RefSeq gene 65993 66553 . + . ID=gene-LP088_RS00340;Name=LP088_RS00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00340;old_locus_tag=LP088_00335 NZ_CP087814.1 GeneMarkS-2+ CDS 65993 66553 . + 0 ID=cds-WP_078274891.1;Parent=gene-LP088_RS00340;Dbxref=Genbank:WP_078274891.1;Name=WP_078274891.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS00340;product=hypothetical protein;protein_id=WP_078274891.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 66712 66903 . - . ID=gene-LP088_RS00345;Name=LP088_RS00345;end_range=66903,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS00345;old_locus_tag=LP088_00340;partial=true;pseudo=true NZ_CP087814.1 Protein Homology CDS 66712 66903 . - 0 ID=cds-LP088_RS00345;Parent=gene-LP088_RS00345;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=66903,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004577240.1;locus_tag=LP088_RS00345;partial=true;product=IS30 family transposase;pseudo=true;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 67147 67275 . - . ID=gene-LP088_RS00350;Name=LP088_RS00350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS00350;partial=true;pseudo=true;start_range=.,67147 NZ_CP087814.1 Protein Homology CDS 67147 67275 . - 0 ID=cds-LP088_RS00350;Parent=gene-LP088_RS00350;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025304.2;locus_tag=LP088_RS00350;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,67147;transl_table=11 NZ_CP087814.1 RefSeq gene 67381 67830 . - . ID=gene-LP088_RS00355;Name=LP088_RS00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00355;old_locus_tag=LP088_00350 NZ_CP087814.1 GeneMarkS-2+ CDS 67381 67830 . - 0 ID=cds-WP_078274889.1;Parent=gene-LP088_RS00355;Dbxref=Genbank:WP_078274889.1;Name=WP_078274889.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS00355;product=hypothetical protein;protein_id=WP_078274889.1;transl_table=11 NZ_CP087814.1 RefSeq gene 68069 70894 . - . ID=gene-LP088_RS00360;Name=LP088_RS00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00360;old_locus_tag=LP088_00355 NZ_CP087814.1 Protein Homology CDS 68069 70894 . - 0 ID=cds-WP_078274888.1;Parent=gene-LP088_RS00360;Dbxref=Genbank:WP_078274888.1;Name=WP_078274888.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01776.1;locus_tag=LP088_RS00360;product=lactoferrin/transferrin family TonB-dependent receptor;protein_id=WP_078274888.1;transl_table=11 NZ_CP087814.1 RefSeq gene 71003 72847 . - . ID=gene-LP088_RS00365;Name=LP088_RS00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00365;old_locus_tag=LP088_00360 NZ_CP087814.1 Protein Homology CDS 71003 72847 . - 0 ID=cds-WP_158079695.1;Parent=gene-LP088_RS00365;Dbxref=Genbank:WP_158079695.1;Name=WP_158079695.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013466.2;locus_tag=LP088_RS00365;product=transferrin-binding protein-like solute binding protein;protein_id=WP_158079695.1;transl_table=11 NZ_CP087814.1 RefSeq gene 73180 73518 . - . ID=gene-LP088_RS00370;Name=LP088_RS00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00370;old_locus_tag=LP088_00365 NZ_CP087814.1 Protein Homology CDS 73180 73518 . - 0 ID=cds-WP_264676060.1;Parent=gene-LP088_RS00370;Dbxref=Genbank:WP_264676060.1;Name=WP_264676060.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017538.2;locus_tag=LP088_RS00370;product=hypothetical protein;protein_id=WP_264676060.1;transl_table=11 NZ_CP087814.1 cmsearch riboswitch 73627 73735 . + . ID=id-NZ_CP087814.1:73627..73735;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP087814.1 RefSeq gene 73993 75168 . - . ID=gene-LP088_RS00375;Name=LP088_RS00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00375;old_locus_tag=LP088_00370 NZ_CP087814.1 Protein Homology CDS 73993 75168 . - 0 ID=cds-WP_078273673.1;Parent=gene-LP088_RS00375;Dbxref=Genbank:WP_078273673.1;Name=WP_078273673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005402020.1;locus_tag=LP088_RS00375;product=RNA-guided endonuclease TnpB family protein;protein_id=WP_078273673.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 75165 75777 . - . ID=gene-LP088_RS00380;Name=LP088_RS00380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS00380;old_locus_tag=LP088_00375;pseudo=true NZ_CP087814.1 Protein Homology CDS 75165 75777 . - 0 ID=cds-LP088_RS00380;Parent=gene-LP088_RS00380;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850926.1;locus_tag=LP088_RS00380;product=IS607 family transposase;pseudo=true;transl_table=11 NZ_CP087814.1 RefSeq gene 75832 78066 . - . ID=gene-LP088_RS00385;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=LP088_RS00385;old_locus_tag=LP088_00380 NZ_CP087814.1 Protein Homology CDS 75832 78066 . - 0 ID=cds-WP_112742747.1;Parent=gene-LP088_RS00385;Dbxref=Genbank:WP_112742747.1;Name=WP_112742747.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parC;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019673621.1;locus_tag=LP088_RS00385;product=DNA topoisomerase IV subunit A;protein_id=WP_112742747.1;transl_table=11 NZ_CP087814.1 RefSeq gene 78215 78541 . + . ID=gene-LP088_RS00390;Name=LP088_RS00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00390;old_locus_tag=LP088_00385 NZ_CP087814.1 Protein Homology CDS 78215 78541 . + 0 ID=cds-WP_112742746.1;Parent=gene-LP088_RS00390;Dbxref=Genbank:WP_112742746.1;Name=WP_112742746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519972.1;locus_tag=LP088_RS00390;product=TraR/DksA family transcriptional regulator;protein_id=WP_112742746.1;transl_table=11 NZ_CP087814.1 RefSeq gene 78606 80972 . - . ID=gene-LP088_RS00395;Name=LP088_RS00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00395;old_locus_tag=LP088_00390 NZ_CP087814.1 Protein Homology CDS 78606 80972 . - 0 ID=cds-WP_112742745.1;Parent=gene-LP088_RS00395;Dbxref=Genbank:WP_112742745.1;Name=WP_112742745.1;Ontology_term=GO:0015968,GO:0015969,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=stringent response|0015968||IEA,guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520381.1;locus_tag=LP088_RS00395;product=RelA/SpoT family protein;protein_id=WP_112742745.1;transl_table=11 NZ_CP087814.1 RefSeq gene 81676 81834 . - . ID=gene-LP088_RS00400;Name=LP088_RS00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00400;old_locus_tag=LP088_00395 NZ_CP087814.1 GeneMarkS-2+ CDS 81676 81834 . - 0 ID=cds-WP_156892333.1;Parent=gene-LP088_RS00400;Dbxref=Genbank:WP_156892333.1;Name=WP_156892333.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS00400;product=hypothetical protein;protein_id=WP_156892333.1;transl_table=11 NZ_CP087814.1 RefSeq gene 81929 83590 . + . ID=gene-LP088_RS00405;Name=LP088_RS00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00405;old_locus_tag=LP088_00400 NZ_CP087814.1 Protein Homology CDS 81929 83590 . + 0 ID=cds-WP_228157727.1;Parent=gene-LP088_RS00405;Dbxref=Genbank:WP_228157727.1;Name=WP_228157727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003666619.1;locus_tag=LP088_RS00405;product=DEAD/DEAH box helicase;protein_id=WP_228157727.1;transl_table=11 NZ_CP087814.1 RefSeq gene 83689 84741 . + . ID=gene-LP088_RS00410;Name=LP088_RS00410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00410;old_locus_tag=LP088_00405 NZ_CP087814.1 GeneMarkS-2+ CDS 83689 84741 . + 0 ID=cds-WP_112742743.1;Parent=gene-LP088_RS00410;Dbxref=Genbank:WP_112742743.1;Name=WP_112742743.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS00410;product=hypothetical protein;protein_id=WP_112742743.1;transl_table=11 NZ_CP087814.1 RefSeq gene 84805 85092 . - . ID=gene-LP088_RS00415;Name=LP088_RS00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00415;old_locus_tag=LP088_00410 NZ_CP087814.1 Protein Homology CDS 84805 85092 . - 0 ID=cds-WP_078273667.1;Parent=gene-LP088_RS00415;Dbxref=Genbank:WP_078273667.1;Name=WP_078273667.1;Ontology_term=GO:0006310,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011281249.1;locus_tag=LP088_RS00415;product=integration host factor subunit alpha;protein_id=WP_078273667.1;transl_table=11 NZ_CP087814.1 RefSeq gene 85168 87555 . - . ID=gene-LP088_RS00420;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=LP088_RS00420;old_locus_tag=LP088_00415 NZ_CP087814.1 Protein Homology CDS 85168 87555 . - 0 ID=cds-WP_112742742.1;Parent=gene-LP088_RS00420;Dbxref=Genbank:WP_112742742.1;Name=WP_112742742.1;Ontology_term=GO:0006432,GO:0004826,GO:0009328;gbkey=CDS;gene=pheT;go_component=phenylalanine-tRNA ligase complex|0009328||IEA;go_function=phenylalanine-tRNA ligase activity|0004826||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005016173.1;locus_tag=LP088_RS00420;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_112742742.1;transl_table=11 NZ_CP087814.1 RefSeq gene 87981 88211 . - . ID=gene-LP088_RS00425;Name=LP088_RS00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00425;old_locus_tag=LP088_00420 NZ_CP087814.1 GeneMarkS-2+ CDS 87981 88211 . - 0 ID=cds-WP_112742741.1;Parent=gene-LP088_RS00425;Dbxref=Genbank:WP_112742741.1;Name=WP_112742741.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS00425;product=hypothetical protein;protein_id=WP_112742741.1;transl_table=11 NZ_CP087814.1 RefSeq gene 88221 89279 . - . ID=gene-LP088_RS00430;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=LP088_RS00430;old_locus_tag=LP088_00425 NZ_CP087814.1 Protein Homology CDS 88221 89279 . - 0 ID=cds-WP_112742740.1;Parent=gene-LP088_RS00430;Dbxref=Genbank:WP_112742740.1;Name=WP_112742740.1;Ontology_term=GO:0006432,GO:0004826,GO:0009328;gbkey=CDS;gene=pheS;go_component=phenylalanine-tRNA ligase complex|0009328||IEA;go_function=phenylalanine-tRNA ligase activity|0004826||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003666615.1;locus_tag=LP088_RS00430;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_112742740.1;transl_table=11 NZ_CP087814.1 RefSeq gene 89752 90975 . + . ID=gene-LP088_RS00435;Name=LP088_RS00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00435;old_locus_tag=LP088_00430 NZ_CP087814.1 GeneMarkS-2+ CDS 89752 90975 . + 0 ID=cds-WP_264676061.1;Parent=gene-LP088_RS00435;Dbxref=Genbank:WP_264676061.1;Name=WP_264676061.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS00435;product=porin;protein_id=WP_264676061.1;transl_table=11 NZ_CP087814.1 RefSeq gene 90996 92288 . + . ID=gene-LP088_RS00440;Name=LP088_RS00440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00440;old_locus_tag=LP088_00435 NZ_CP087814.1 GeneMarkS-2+ CDS 90996 92288 . + 0 ID=cds-WP_112742738.1;Parent=gene-LP088_RS00440;Dbxref=Genbank:WP_112742738.1;Name=WP_112742738.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS00440;product=hypothetical protein;protein_id=WP_112742738.1;transl_table=11 NZ_CP087814.1 RefSeq gene 92391 94988 . + . ID=gene-LP088_RS00445;Name=LP088_RS00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00445;old_locus_tag=LP088_00440 NZ_CP087814.1 Protein Homology CDS 92391 94988 . + 0 ID=cds-WP_112742737.1;Parent=gene-LP088_RS00445;Dbxref=Genbank:WP_112742737.1;Name=WP_112742737.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF014896.2;locus_tag=LP088_RS00445;product=prolyl oligopeptidase family serine peptidase;protein_id=WP_112742737.1;transl_table=11 NZ_CP087814.1 RefSeq gene 95195 96238 . + . ID=gene-LP088_RS00450;Name=LP088_RS00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00450;old_locus_tag=LP088_00445 NZ_CP087814.1 Protein Homology CDS 95195 96238 . + 0 ID=cds-WP_078273659.1;Parent=gene-LP088_RS00450;Dbxref=Genbank:WP_078273659.1;Name=WP_078273659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520327.1;locus_tag=LP088_RS00450;product=siderophore ABC transporter substrate-binding protein;protein_id=WP_078273659.1;transl_table=11 NZ_CP087814.1 RefSeq gene 96660 97649 . + . ID=gene-LP088_RS00455;Name=LP088_RS00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00455;old_locus_tag=LP088_00450 NZ_CP087814.1 Protein Homology CDS 96660 97649 . + 0 ID=cds-WP_078273658.1;Parent=gene-LP088_RS00455;Dbxref=Genbank:WP_078273658.1;Name=WP_078273658.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019673241.1;locus_tag=LP088_RS00455;product=iron chelate uptake ABC transporter family permease subunit;protein_id=WP_078273658.1;transl_table=11 NZ_CP087814.1 RefSeq gene 97659 98633 . + . ID=gene-LP088_RS00460;Name=LP088_RS00460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00460;old_locus_tag=LP088_00455 NZ_CP087814.1 Protein Homology CDS 97659 98633 . + 0 ID=cds-WP_078273657.1;Parent=gene-LP088_RS00460;Dbxref=Genbank:WP_078273657.1;Name=WP_078273657.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520329.1;locus_tag=LP088_RS00460;product=iron chelate uptake ABC transporter family permease subunit;protein_id=WP_078273657.1;transl_table=11 NZ_CP087814.1 RefSeq gene 98676 99374 . + . ID=gene-LP088_RS00465;Name=LP088_RS00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00465;old_locus_tag=LP088_00460 NZ_CP087814.1 Protein Homology CDS 98676 99374 . + 0 ID=cds-WP_078273656.1;Parent=gene-LP088_RS00465;Dbxref=Genbank:WP_078273656.1;Name=WP_078273656.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014566.2;locus_tag=LP088_RS00465;product=CPBP family intramembrane metalloprotease;protein_id=WP_078273656.1;transl_table=11 NZ_CP087814.1 RefSeq gene 99386 100147 . + . ID=gene-LP088_RS00470;Name=LP088_RS00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00470;old_locus_tag=LP088_00465 NZ_CP087814.1 Protein Homology CDS 99386 100147 . + 0 ID=cds-WP_078273655.1;Parent=gene-LP088_RS00470;Dbxref=Genbank:WP_078273655.1;Name=WP_078273655.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196265.1;locus_tag=LP088_RS00470;product=ATP-binding cassette domain-containing protein;protein_id=WP_078273655.1;transl_table=11 NZ_CP087814.1 RefSeq gene 100238 100993 . + . ID=gene-LP088_RS00475;Name=LP088_RS00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00475;old_locus_tag=LP088_00470 NZ_CP087814.1 GeneMarkS-2+ CDS 100238 100993 . + 0 ID=cds-WP_112742735.1;Parent=gene-LP088_RS00475;Dbxref=Genbank:WP_112742735.1;Name=WP_112742735.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS00475;product=hypothetical protein;protein_id=WP_112742735.1;transl_table=11 NZ_CP087814.1 RefSeq gene 100990 101460 . + . ID=gene-LP088_RS00480;Name=LP088_RS00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00480;old_locus_tag=LP088_00475 NZ_CP087814.1 GeneMarkS-2+ CDS 100990 101460 . + 0 ID=cds-WP_147287298.1;Parent=gene-LP088_RS00480;Dbxref=Genbank:WP_147287298.1;Name=WP_147287298.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS00480;product=hypothetical protein;protein_id=WP_147287298.1;transl_table=11 NZ_CP087814.1 RefSeq gene 101608 102789 . - . ID=gene-LP088_RS00485;Name=LP088_RS00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00485;old_locus_tag=LP088_00480 NZ_CP087814.1 Protein Homology CDS 101608 102789 . - 0 ID=cds-WP_078273652.1;Parent=gene-LP088_RS00485;Dbxref=Genbank:WP_078273652.1;Name=WP_078273652.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003672593.1;locus_tag=LP088_RS00485;product=MFS transporter;protein_id=WP_078273652.1;transl_table=11 NZ_CP087814.1 RefSeq gene 103035 103301 . - . ID=gene-LP088_RS00490;Name=nqrM;gbkey=Gene;gene=nqrM;gene_biotype=protein_coding;locus_tag=LP088_RS00490;old_locus_tag=LP088_00485 NZ_CP087814.1 Protein Homology CDS 103035 103301 . - 0 ID=cds-WP_078273651.1;Parent=gene-LP088_RS00490;Dbxref=Genbank:WP_078273651.1;Name=WP_078273651.1;gbkey=CDS;gene=nqrM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003662198.1;locus_tag=LP088_RS00490;product=(Na+)-NQR maturation NqrM;protein_id=WP_078273651.1;transl_table=11 NZ_CP087814.1 RefSeq gene 103508 103678 . - . ID=gene-LP088_RS00495;Name=LP088_RS00495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00495;old_locus_tag=LP088_00490 NZ_CP087814.1 GeneMarkS-2+ CDS 103508 103678 . - 0 ID=cds-WP_158079615.1;Parent=gene-LP088_RS00495;Dbxref=Genbank:WP_158079615.1;Name=WP_158079615.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS00495;product=hypothetical protein;protein_id=WP_158079615.1;transl_table=11 NZ_CP087814.1 RefSeq gene 103671 105236 . - . ID=gene-LP088_RS00500;Name=creD;gbkey=Gene;gene=creD;gene_biotype=protein_coding;locus_tag=LP088_RS00500;old_locus_tag=LP088_00495 NZ_CP087814.1 Protein Homology CDS 103671 105236 . - 0 ID=cds-WP_112742734.1;Parent=gene-LP088_RS00500;Dbxref=Genbank:WP_112742734.1;Name=WP_112742734.1;gbkey=CDS;gene=creD;inference=COORDINATES: protein motif:HMM:NF008712.1;locus_tag=LP088_RS00500;product=cell envelope integrity protein CreD;protein_id=WP_112742734.1;transl_table=11 NZ_CP087814.1 RefSeq gene 105335 105793 . - . ID=gene-LP088_RS00505;Name=LP088_RS00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00505;old_locus_tag=LP088_00500 NZ_CP087814.1 GeneMarkS-2+ CDS 105335 105793 . - 0 ID=cds-WP_078273649.1;Parent=gene-LP088_RS00505;Dbxref=Genbank:WP_078273649.1;Name=WP_078273649.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS00505;product=hypothetical protein;protein_id=WP_078273649.1;transl_table=11 NZ_CP087814.1 RefSeq gene 105790 106263 . - . ID=gene-LP088_RS00510;Name=LP088_RS00510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00510;old_locus_tag=LP088_00505 NZ_CP087814.1 Protein Homology CDS 105790 106263 . - 0 ID=cds-WP_078273648.1;Parent=gene-LP088_RS00510;Dbxref=Genbank:WP_078273648.1;Name=WP_078273648.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017885.2;locus_tag=LP088_RS00510;product=ImmA/IrrE family metallo-endopeptidase;protein_id=WP_078273648.1;transl_table=11 NZ_CP087814.1 RefSeq gene 106519 107982 . - . ID=gene-LP088_RS00515;Name=creC;gbkey=Gene;gene=creC;gene_biotype=protein_coding;locus_tag=LP088_RS00515;old_locus_tag=LP088_00510 NZ_CP087814.1 Protein Homology CDS 106519 107982 . - 0 ID=cds-WP_162860453.1;Parent=gene-LP088_RS00515;Dbxref=Genbank:WP_162860453.1;Name=WP_162860453.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=creC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: protein motif:HMM:NF008312.0;locus_tag=LP088_RS00515;product=two-component system sensor histidine kinase CreC;protein_id=WP_162860453.1;transl_table=11 NZ_CP087814.1 RefSeq gene 107976 108695 . - . ID=gene-LP088_RS00520;Name=LP088_RS00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00520;old_locus_tag=LP088_00515 NZ_CP087814.1 Protein Homology CDS 107976 108695 . - 0 ID=cds-WP_112742732.1;Parent=gene-LP088_RS00520;Dbxref=Genbank:WP_112742732.1;Name=WP_112742732.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: protein motif:HMM:NF012301.2;locus_tag=LP088_RS00520;product=response regulator;protein_id=WP_112742732.1;transl_table=11 NZ_CP087814.1 RefSeq gene 108780 111569 . - . ID=gene-LP088_RS00525;Name=LP088_RS00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00525;old_locus_tag=LP088_00520 NZ_CP087814.1 Protein Homology CDS 108780 111569 . - 0 ID=cds-WP_228157726.1;Parent=gene-LP088_RS00525;Dbxref=Genbank:WP_228157726.1;Name=WP_228157726.1;Ontology_term=GO:0003677,GO:0005524,GO:0016787;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017402834.1;locus_tag=LP088_RS00525;product=DEAD/DEAH box helicase family protein;protein_id=WP_228157726.1;transl_table=11 NZ_CP087814.1 RefSeq gene 111572 112948 . - . ID=gene-LP088_RS00530;Name=LP088_RS00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00530;old_locus_tag=LP088_00525 NZ_CP087814.1 Protein Homology CDS 111572 112948 . - 0 ID=cds-WP_244893643.1;Parent=gene-LP088_RS00530;Dbxref=Genbank:WP_244893643.1;Name=WP_244893643.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013704.2;locus_tag=LP088_RS00530;product=DNA methyltransferase;protein_id=WP_244893643.1;transl_table=11 NZ_CP087814.1 RefSeq gene 113082 113153 . - . ID=gene-LP088_RS00535;Name=LP088_RS00535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00535;old_locus_tag=LP088_00530 NZ_CP087814.1 Protein Homology CDS 113082 113153 . - 0 ID=cds-WP_264676320.1;Parent=gene-LP088_RS00535;Dbxref=Genbank:WP_264676320.1;Name=WP_264676320.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016757.2;locus_tag=LP088_RS00535;product=PT domain-containing protein;protein_id=WP_264676320.1;transl_table=11 NZ_CP087814.1 RefSeq gene 113542 115458 . - . ID=gene-LP088_RS00540;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=LP088_RS00540;old_locus_tag=LP088_00535 NZ_CP087814.1 Protein Homology CDS 113542 115458 . - 0 ID=cds-WP_078273644.1;Parent=gene-LP088_RS00540;Dbxref=Genbank:WP_078273644.1;Name=WP_078273644.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000034699.1;locus_tag=LP088_RS00540;product=molecular chaperone DnaK;protein_id=WP_078273644.1;transl_table=11 NZ_CP087814.1 RefSeq gene 115749 116267 . - . ID=gene-LP088_RS00545;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=LP088_RS00545;old_locus_tag=LP088_00540 NZ_CP087814.1 Protein Homology CDS 115749 116267 . - 0 ID=cds-WP_078273643.1;Parent=gene-LP088_RS00545;Dbxref=Genbank:WP_078273643.1;Name=WP_078273643.1;Ontology_term=GO:0006457,GO:0000774,GO:0042803,GO:0051087;gbkey=CDS;gene=grpE;go_function=adenyl-nucleotide exchange factor activity|0000774||IEA,protein homodimerization activity|0042803||IEA,chaperone binding|0051087||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003672290.1;locus_tag=LP088_RS00545;product=nucleotide exchange factor GrpE;protein_id=WP_078273643.1;transl_table=11 NZ_CP087814.1 RefSeq gene 116392 116649 . + . ID=gene-LP088_RS00550;Name=LP088_RS00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00550;old_locus_tag=LP088_00545 NZ_CP087814.1 GeneMarkS-2+ CDS 116392 116649 . + 0 ID=cds-WP_078273642.1;Parent=gene-LP088_RS00550;Dbxref=Genbank:WP_078273642.1;Name=WP_078273642.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS00550;product=hypothetical protein;protein_id=WP_078273642.1;transl_table=11 NZ_CP087814.1 RefSeq gene 116630 117031 . + . ID=gene-LP088_RS00555;Name=LP088_RS00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00555;old_locus_tag=LP088_00550 NZ_CP087814.1 Protein Homology CDS 116630 117031 . + 0 ID=cds-WP_158079613.1;Parent=gene-LP088_RS00555;Dbxref=Genbank:WP_158079613.1;Name=WP_158079613.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013970.2;locus_tag=LP088_RS00555;product=PIN domain-containing protein;protein_id=WP_158079613.1;transl_table=11 NZ_CP087814.1 RefSeq gene 117048 117884 . + . ID=gene-LP088_RS00560;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=LP088_RS00560;old_locus_tag=LP088_00555 NZ_CP087814.1 Protein Homology CDS 117048 117884 . + 0 ID=cds-WP_112742729.1;Parent=gene-LP088_RS00560;Dbxref=Genbank:WP_112742729.1;Name=WP_112742729.1;Ontology_term=GO:0009451,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003662200.1;locus_tag=LP088_RS00560;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_112742729.1;transl_table=11 NZ_CP087814.1 RefSeq gene 118347 119207 . + . ID=gene-LP088_RS00565;Name=LP088_RS00565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00565;old_locus_tag=LP088_00560 NZ_CP087814.1 Protein Homology CDS 118347 119207 . + 0 ID=cds-WP_112742728.1;Parent=gene-LP088_RS00565;Dbxref=Genbank:WP_112742728.1;Name=WP_112742728.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013509.2;locus_tag=LP088_RS00565;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_112742728.1;transl_table=11 NZ_CP087814.1 RefSeq gene 119323 120303 . + . ID=gene-LP088_RS00570;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=LP088_RS00570;old_locus_tag=LP088_00565 NZ_CP087814.1 Protein Homology CDS 119323 120303 . + 0 ID=cds-WP_112742727.1;Parent=gene-LP088_RS00570;Dbxref=Genbank:WP_112742727.1;Name=WP_112742727.1;Ontology_term=GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011281310.1;locus_tag=LP088_RS00570;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_112742727.1;transl_table=11 NZ_CP087814.1 RefSeq gene 120379 120759 . + . ID=gene-LP088_RS00575;Name=LP088_RS00575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00575;old_locus_tag=LP088_00570 NZ_CP087814.1 Protein Homology CDS 120379 120759 . + 0 ID=cds-WP_228157725.1;Parent=gene-LP088_RS00575;Dbxref=Genbank:WP_228157725.1;Name=WP_228157725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657301.1;locus_tag=LP088_RS00575;product=cell division protein FtsL;protein_id=WP_228157725.1;transl_table=11 NZ_CP087814.1 RefSeq gene 120752 122809 . + . ID=gene-LP088_RS00580;Name=LP088_RS00580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00580;old_locus_tag=LP088_00575 NZ_CP087814.1 Protein Homology CDS 120752 122809 . + 0 ID=cds-WP_112742726.1;Parent=gene-LP088_RS00580;Dbxref=Genbank:WP_112742726.1;Name=WP_112742726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519074.1;locus_tag=LP088_RS00580;product=penicillin-binding protein 2;protein_id=WP_112742726.1;transl_table=11 NZ_CP087814.1 RefSeq gene 122852 124363 . + . ID=gene-LP088_RS00585;Name=LP088_RS00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00585;old_locus_tag=LP088_00580 NZ_CP087814.1 Protein Homology CDS 122852 124363 . + 0 ID=cds-WP_078273634.1;Parent=gene-LP088_RS00585;Dbxref=Genbank:WP_078273634.1;Name=WP_078273634.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016874;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003672628.1;locus_tag=LP088_RS00585;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=WP_078273634.1;transl_table=11 NZ_CP087814.1 RefSeq gene 124360 124734 . + . ID=gene-LP088_RS00590;Name=LP088_RS00590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00590;old_locus_tag=LP088_00585 NZ_CP087814.1 GeneMarkS-2+ CDS 124360 124734 . + 0 ID=cds-WP_078273633.1;Parent=gene-LP088_RS00590;Dbxref=Genbank:WP_078273633.1;Name=WP_078273633.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS00590;product=hypothetical protein;protein_id=WP_078273633.1;transl_table=11 NZ_CP087814.1 RefSeq gene 124734 125174 . + . ID=gene-LP088_RS00595;Name=LP088_RS00595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00595;old_locus_tag=LP088_00590 NZ_CP087814.1 GeneMarkS-2+ CDS 124734 125174 . + 0 ID=cds-WP_112742725.1;Parent=gene-LP088_RS00595;Dbxref=Genbank:WP_112742725.1;Name=WP_112742725.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS00595;product=hypothetical protein;protein_id=WP_112742725.1;transl_table=11 NZ_CP087814.1 RefSeq gene 125222 126733 . + . ID=gene-LP088_RS00600;Name=LP088_RS00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00600;old_locus_tag=LP088_00595 NZ_CP087814.1 Protein Homology CDS 125222 126733 . + 0 ID=cds-WP_078273631.1;Parent=gene-LP088_RS00600;Dbxref=Genbank:WP_078273631.1;Name=WP_078273631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519337.1;locus_tag=LP088_RS00600;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_078273631.1;transl_table=11 NZ_CP087814.1 RefSeq gene 126737 127846 . + . ID=gene-LP088_RS00605;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=LP088_RS00605;old_locus_tag=LP088_00600 NZ_CP087814.1 Protein Homology CDS 126737 127846 . + 0 ID=cds-WP_078273630.1;Parent=gene-LP088_RS00605;Dbxref=Genbank:WP_078273630.1;Name=WP_078273630.1;Ontology_term=GO:0009252,GO:0008963;gbkey=CDS;gene=mraY;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011959433.1;locus_tag=LP088_RS00605;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_078273630.1;transl_table=11 NZ_CP087814.1 RefSeq gene 127938 129164 . - . ID=gene-LP088_RS00610;Name=LP088_RS00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00610;old_locus_tag=LP088_00605 NZ_CP087814.1 Protein Homology CDS 127938 129164 . - 0 ID=cds-WP_078273629.1;Parent=gene-LP088_RS00610;Dbxref=Genbank:WP_078273629.1;Name=WP_078273629.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: protein motif:HMM:NF015197.2;locus_tag=LP088_RS00610;product=aromatic amino acid transporter;protein_id=WP_078273629.1;transl_table=11 NZ_CP087814.1 RefSeq gene 129362 129748 . + . ID=gene-LP088_RS00615;Name=LP088_RS00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00615;old_locus_tag=LP088_00610 NZ_CP087814.1 Protein Homology CDS 129362 129748 . + 0 ID=cds-WP_228157724.1;Parent=gene-LP088_RS00615;Dbxref=Genbank:WP_228157724.1;Name=WP_228157724.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019612.2;locus_tag=LP088_RS00615;product=PH domain-containing protein;protein_id=WP_228157724.1;transl_table=11 NZ_CP087814.1 RefSeq gene 129724 129984 . + . ID=gene-LP088_RS00620;Name=LP088_RS00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00620;old_locus_tag=LP088_00615 NZ_CP087814.1 GeneMarkS-2+ CDS 129724 129984 . + 0 ID=cds-WP_078273628.1;Parent=gene-LP088_RS00620;Dbxref=Genbank:WP_078273628.1;Name=WP_078273628.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS00620;product=hypothetical protein;protein_id=WP_078273628.1;transl_table=11 NZ_CP087814.1 RefSeq gene 130048 131244 . - . ID=gene-LP088_RS00625;Name=LP088_RS00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00625;old_locus_tag=LP088_00620 NZ_CP087814.1 Protein Homology CDS 130048 131244 . - 0 ID=cds-WP_112742724.1;Parent=gene-LP088_RS00625;Dbxref=Genbank:WP_112742724.1;Name=WP_112742724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657248.1;locus_tag=LP088_RS00625;product=aspartate/tyrosine/aromatic aminotransferase;protein_id=WP_112742724.1;transl_table=11 NZ_CP087814.1 RefSeq gene 131342 131638 . - . ID=gene-LP088_RS00630;Name=LP088_RS00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00630;old_locus_tag=LP088_00625 NZ_CP087814.1 Protein Homology CDS 131342 131638 . - 0 ID=cds-WP_112742723.1;Parent=gene-LP088_RS00630;Dbxref=Genbank:WP_112742723.1;Name=WP_112742723.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024252.2;locus_tag=LP088_RS00630;product=helix-turn-helix domain-containing protein;protein_id=WP_112742723.1;transl_table=11 NZ_CP087814.1 RefSeq gene 131580 131768 . - . ID=gene-LP088_RS00635;Name=LP088_RS00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00635;old_locus_tag=LP088_00630 NZ_CP087814.1 Protein Homology CDS 131580 131768 . - 0 ID=cds-WP_112742722.1;Parent=gene-LP088_RS00635;Dbxref=Genbank:WP_112742722.1;Name=WP_112742722.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017757.2;locus_tag=LP088_RS00635;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_112742722.1;transl_table=11 NZ_CP087814.1 RefSeq gene 131896 132813 . - . ID=gene-LP088_RS00640;Name=LP088_RS00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00640;old_locus_tag=LP088_00635 NZ_CP087814.1 Protein Homology CDS 131896 132813 . - 0 ID=cds-WP_078273625.1;Parent=gene-LP088_RS00640;Dbxref=Genbank:WP_078273625.1;Name=WP_078273625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657246.1;locus_tag=LP088_RS00640;product=LysR family transcriptional regulator;protein_id=WP_078273625.1;transl_table=11 NZ_CP087814.1 RefSeq gene 132984 134663 . + . ID=gene-LP088_RS00645;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=LP088_RS00645;old_locus_tag=LP088_00640 NZ_CP087814.1 Protein Homology CDS 132984 134663 . + 0 ID=cds-WP_115368806.1;Parent=gene-LP088_RS00645;Dbxref=Genbank:WP_115368806.1;Name=WP_115368806.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007394579.1;locus_tag=LP088_RS00645;product=DNA repair protein RecN;protein_id=WP_115368806.1;transl_table=11 NZ_CP087814.1 RefSeq gene 134874 135458 . - . ID=gene-LP088_RS00650;Name=LP088_RS00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00650;old_locus_tag=LP088_00645 NZ_CP087814.1 GeneMarkS-2+ CDS 134874 135458 . - 0 ID=cds-WP_143821655.1;Parent=gene-LP088_RS00650;Dbxref=Genbank:WP_143821655.1;Name=WP_143821655.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS00650;product=hypothetical protein;protein_id=WP_143821655.1;transl_table=11 NZ_CP087814.1 RefSeq gene 135923 136429 . + . ID=gene-LP088_RS00655;Name=LP088_RS00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00655;old_locus_tag=LP088_00650 NZ_CP087814.1 Protein Homology CDS 135923 136429 . + 0 ID=cds-WP_228157862.1;Parent=gene-LP088_RS00655;Dbxref=Genbank:WP_228157862.1;Name=WP_228157862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657190.1;locus_tag=LP088_RS00655;product=YqgE/AlgH family protein;protein_id=WP_228157862.1;transl_table=11 NZ_CP087814.1 RefSeq gene 136519 137004 . + . ID=gene-LP088_RS00660;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=LP088_RS00660;old_locus_tag=LP088_00655 NZ_CP087814.1 Protein Homology CDS 136519 137004 . + 0 ID=cds-WP_078273621.1;Parent=gene-LP088_RS00660;Dbxref=Genbank:WP_078273621.1;Name=WP_078273621.1;Ontology_term=GO:0008150,GO:0003674,GO:0005737;gbkey=CDS;gene=ruvX;go_component=cytoplasm|0005737||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011959439.1;locus_tag=LP088_RS00660;product=Holliday junction resolvase RuvX;protein_id=WP_078273621.1;transl_table=11 NZ_CP087814.1 RefSeq gene 137076 137591 . + . ID=gene-LP088_RS00665;Name=LP088_RS00665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00665;old_locus_tag=LP088_00660 NZ_CP087814.1 Protein Homology CDS 137076 137591 . + 0 ID=cds-WP_228157723.1;Parent=gene-LP088_RS00665;Dbxref=Genbank:WP_228157723.1;Name=WP_228157723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003660403.1;locus_tag=LP088_RS00665;product=hypothetical protein;protein_id=WP_228157723.1;transl_table=11 NZ_CP087814.1 RefSeq gene 137647 138525 . + . ID=gene-LP088_RS00670;Name=rlmJ;gbkey=Gene;gene=rlmJ;gene_biotype=protein_coding;locus_tag=LP088_RS00670;old_locus_tag=LP088_00665 NZ_CP087814.1 Protein Homology CDS 137647 138525 . + 0 ID=cds-WP_112742718.1;Parent=gene-LP088_RS00670;Dbxref=Genbank:WP_112742718.1;Name=WP_112742718.1;Ontology_term=GO:0070475,GO:0008649;gbkey=CDS;gene=rlmJ;go_function=rRNA methyltransferase activity|0008649||IEA;go_process=rRNA base methylation|0070475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004462544.1;locus_tag=LP088_RS00670;product=23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ;protein_id=WP_112742718.1;transl_table=11 NZ_CP087814.1 RefSeq gene 138642 139445 . + . ID=gene-LP088_RS00675;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=LP088_RS00675;old_locus_tag=LP088_00670 NZ_CP087814.1 Protein Homology CDS 138642 139445 . + 0 ID=cds-WP_112742717.1;Parent=gene-LP088_RS00675;Dbxref=Genbank:WP_112742717.1;Name=WP_112742717.1;Ontology_term=GO:0008654,GO:0003882;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-serine O-phosphatidyltransferase activity|0003882||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004899430.1;locus_tag=LP088_RS00675;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=WP_112742717.1;transl_table=11 NZ_CP087814.1 RefSeq gene 139508 139645 . + . ID=gene-LP088_RS00680;Name=LP088_RS00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00680;old_locus_tag=LP088_00675 NZ_CP087814.1 GeneMarkS-2+ CDS 139508 139645 . + 0 ID=cds-WP_162860451.1;Parent=gene-LP088_RS00680;Dbxref=Genbank:WP_162860451.1;Name=WP_162860451.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS00680;product=hypothetical protein;protein_id=WP_162860451.1;transl_table=11 NZ_CP087814.1 RefSeq gene 139655 139972 . + . ID=gene-LP088_RS00685;Name=LP088_RS00685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00685;old_locus_tag=LP088_00680 NZ_CP087814.1 GeneMarkS-2+ CDS 139655 139972 . + 0 ID=cds-WP_162860450.1;Parent=gene-LP088_RS00685;Dbxref=Genbank:WP_162860450.1;Name=WP_162860450.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS00685;product=hypothetical protein;protein_id=WP_162860450.1;transl_table=11 NZ_CP087814.1 RefSeq gene 139905 140411 . + . ID=gene-LP088_RS00690;Name=menA;gbkey=Gene;gene=menA;gene_biotype=protein_coding;locus_tag=LP088_RS00690;old_locus_tag=LP088_00685 NZ_CP087814.1 Protein Homology CDS 139905 140411 . + 0 ID=cds-WP_264676063.1;Parent=gene-LP088_RS00690;Dbxref=Genbank:WP_264676063.1;Name=WP_264676063.1;Ontology_term=GO:0009234,GO:0046428;gbkey=CDS;gene=menA;go_function=1%2C4-dihydroxy-2-naphthoate octaprenyltransferase activity|0046428||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: protein motif:HMM:TIGR00751.1;locus_tag=LP088_RS00690;product=1%2C4-dihydroxy-2-naphthoate octaprenyltransferase;protein_id=WP_264676063.1;transl_table=11 NZ_CP087814.1 RefSeq gene 140929 142459 . + . ID=gene-LP088_RS00695;Name=LP088_RS00695;gbkey=Gene;gene_biotype=rRNA;locus_tag=LP088_RS00695;old_locus_tag=LP088_00690 NZ_CP087814.1 cmsearch rRNA 140929 142459 . + . ID=rna-LP088_RS00695;Parent=gene-LP088_RS00695;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LP088_RS00695;product=16S ribosomal RNA NZ_CP087814.1 cmsearch exon 140929 142459 . + . ID=exon-LP088_RS00695-1;Parent=rna-LP088_RS00695;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LP088_RS00695;product=16S ribosomal RNA NZ_CP087814.1 RefSeq gene 142521 142597 . + . ID=gene-LP088_RS00700;Name=LP088_RS00700;gbkey=Gene;gene_biotype=tRNA;locus_tag=LP088_RS00700;old_locus_tag=LP088_00695 NZ_CP087814.1 tRNAscan-SE tRNA 142521 142597 . + . ID=rna-LP088_RS00700;Parent=gene-LP088_RS00700;anticodon=(pos:142555..142557);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS00700;product=tRNA-Ile NZ_CP087814.1 tRNAscan-SE exon 142521 142597 . + . ID=exon-LP088_RS00700-1;Parent=rna-LP088_RS00700;anticodon=(pos:142555..142557);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS00700;product=tRNA-Ile NZ_CP087814.1 RefSeq gene 142603 142678 . + . ID=gene-LP088_RS00705;Name=LP088_RS00705;gbkey=Gene;gene_biotype=tRNA;locus_tag=LP088_RS00705;old_locus_tag=LP088_00700 NZ_CP087814.1 tRNAscan-SE tRNA 142603 142678 . + . ID=rna-LP088_RS00705;Parent=gene-LP088_RS00705;anticodon=(pos:142636..142638);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS00705;product=tRNA-Ala NZ_CP087814.1 tRNAscan-SE exon 142603 142678 . + . ID=exon-LP088_RS00705-1;Parent=rna-LP088_RS00705;anticodon=(pos:142636..142638);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS00705;product=tRNA-Ala NZ_CP087814.1 RefSeq gene 142995 146220 . + . ID=gene-LP088_RS00710;Name=LP088_RS00710;gbkey=Gene;gene_biotype=rRNA;locus_tag=LP088_RS00710;old_locus_tag=LP088_00705 NZ_CP087814.1 cmsearch rRNA 142995 146220 . + . ID=rna-LP088_RS00710;Parent=gene-LP088_RS00710;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LP088_RS00710;product=23S ribosomal RNA NZ_CP087814.1 cmsearch exon 142995 146220 . + . ID=exon-LP088_RS00710-1;Parent=rna-LP088_RS00710;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LP088_RS00710;product=23S ribosomal RNA NZ_CP087814.1 RefSeq gene 146383 146496 . + . ID=gene-LP088_RS00715;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=LP088_RS00715;old_locus_tag=LP088_00710 NZ_CP087814.1 cmsearch rRNA 146383 146496 . + . ID=rna-LP088_RS00715;Parent=gene-LP088_RS00715;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LP088_RS00715;product=5S ribosomal RNA NZ_CP087814.1 cmsearch exon 146383 146496 . + . ID=exon-LP088_RS00715-1;Parent=rna-LP088_RS00715;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LP088_RS00715;product=5S ribosomal RNA NZ_CP087814.1 RefSeq gene 146631 146753 . + . ID=gene-LP088_RS00720;Name=LP088_RS00720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00720;old_locus_tag=LP088_00715 NZ_CP087814.1 Protein Homology CDS 146631 146753 . + 0 ID=cds-WP_112742715.1;Parent=gene-LP088_RS00720;Dbxref=Genbank:WP_112742715.1;Name=WP_112742715.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019575.2;locus_tag=LP088_RS00720;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_112742715.1;transl_table=11 NZ_CP087814.1 RefSeq gene 146746 147558 . + . ID=gene-LP088_RS00725;Name=LP088_RS00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00725;old_locus_tag=LP088_00720 NZ_CP087814.1 Protein Homology CDS 146746 147558 . + 0 ID=cds-WP_078274347.1;Parent=gene-LP088_RS00725;Dbxref=Genbank:WP_078274347.1;Name=WP_078274347.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: protein motif:HMM:NF013530.2;locus_tag=LP088_RS00725;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_078274347.1;transl_table=11 NZ_CP087814.1 RefSeq gene 147621 149081 . - . ID=gene-LP088_RS00730;Name=LP088_RS00730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00730;old_locus_tag=LP088_00725 NZ_CP087814.1 Protein Homology CDS 147621 149081 . - 0 ID=cds-WP_078274348.1;Parent=gene-LP088_RS00730;Dbxref=Genbank:WP_078274348.1;Name=WP_078274348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011281209.1;locus_tag=LP088_RS00730;product=lytic murein transglycosylase;protein_id=WP_078274348.1;transl_table=11 NZ_CP087814.1 RefSeq gene 149697 150155 . - . ID=gene-LP088_RS00735;Name=LP088_RS00735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00735;old_locus_tag=LP088_00730 NZ_CP087814.1 Protein Homology CDS 149697 150155 . - 0 ID=cds-WP_078274350.1;Parent=gene-LP088_RS00735;Dbxref=Genbank:WP_078274350.1;Name=WP_078274350.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021098.2;locus_tag=LP088_RS00735;product=YsnF/AvaK domain-containing protein;protein_id=WP_078274350.1;transl_table=11 NZ_CP087814.1 RefSeq gene 150372 151220 . - . ID=gene-LP088_RS00740;Name=LP088_RS00740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00740;old_locus_tag=LP088_00735 NZ_CP087814.1 Protein Homology CDS 150372 151220 . - 0 ID=cds-WP_078274351.1;Parent=gene-LP088_RS00740;Dbxref=Genbank:WP_078274351.1;Name=WP_078274351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010195780.1;locus_tag=LP088_RS00740;product=PRC and DUF2382 domain-containing protein;protein_id=WP_078274351.1;transl_table=11 NZ_CP087814.1 RefSeq gene 151970 152383 . + . ID=gene-LP088_RS00745;Name=LP088_RS00745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00745;old_locus_tag=LP088_00740 NZ_CP087814.1 Protein Homology CDS 151970 152383 . + 0 ID=cds-WP_078274353.1;Parent=gene-LP088_RS00745;Dbxref=Genbank:WP_078274353.1;Name=WP_078274353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279383.1;locus_tag=LP088_RS00745;product=ribosome-binding factor A;protein_id=WP_078274353.1;transl_table=11 NZ_CP087814.1 RefSeq gene 152383 153303 . + . ID=gene-LP088_RS00750;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=LP088_RS00750;old_locus_tag=LP088_00745 NZ_CP087814.1 Protein Homology CDS 152383 153303 . + 0 ID=cds-WP_115368800.1;Parent=gene-LP088_RS00750;Dbxref=Genbank:WP_115368800.1;Name=WP_115368800.1;Ontology_term=GO:0006400,GO:0004730;gbkey=CDS;gene=truB;go_function=pseudouridylate synthase activity|0004730||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009767507.1;locus_tag=LP088_RS00750;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_115368800.1;transl_table=11 NZ_CP087814.1 RefSeq gene 153485 154087 . + . ID=gene-LP088_RS00755;Name=LP088_RS00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00755;old_locus_tag=LP088_00750 NZ_CP087814.1 Protein Homology CDS 153485 154087 . + 0 ID=cds-WP_115368799.1;Parent=gene-LP088_RS00755;Dbxref=Genbank:WP_115368799.1;Name=WP_115368799.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024895.2;locus_tag=LP088_RS00755;product=outer membrane beta-barrel protein;protein_id=WP_115368799.1;transl_table=11 NZ_CP087814.1 RefSeq gene 154263 154529 . + . ID=gene-LP088_RS00760;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=LP088_RS00760;old_locus_tag=LP088_00755 NZ_CP087814.1 Protein Homology CDS 154263 154529 . + 0 ID=cds-WP_078274359.1;Parent=gene-LP088_RS00760;Dbxref=Genbank:WP_078274359.1;Name=WP_078274359.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsO;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512454.1;locus_tag=LP088_RS00760;product=30S ribosomal protein S15;protein_id=WP_078274359.1;transl_table=11 NZ_CP087814.1 RefSeq gene 154839 156929 . + . ID=gene-LP088_RS00765;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=LP088_RS00765;old_locus_tag=LP088_00760 NZ_CP087814.1 Protein Homology CDS 154839 156929 . + 0 ID=cds-WP_078274361.1;Parent=gene-LP088_RS00765;Dbxref=Genbank:WP_078274361.1;Name=WP_078274361.1;Ontology_term=GO:0006402,GO:0004654;gbkey=CDS;gene=pnp;go_function=polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003669886.1;locus_tag=LP088_RS00765;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_078274361.1;transl_table=11 NZ_CP087814.1 RefSeq gene 157058 157774 . - . ID=gene-LP088_RS00770;Name=LP088_RS00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00770;old_locus_tag=LP088_00765 NZ_CP087814.1 GeneMarkS-2+ CDS 157058 157774 . - 0 ID=cds-WP_078274363.1;Parent=gene-LP088_RS00770;Dbxref=Genbank:WP_078274363.1;Name=WP_078274363.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS00770;product=hypothetical protein;protein_id=WP_078274363.1;transl_table=11 NZ_CP087814.1 RefSeq gene 157805 157951 . - . ID=gene-LP088_RS00775;Name=LP088_RS00775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00775;old_locus_tag=LP088_00770 NZ_CP087814.1 GeneMarkS-2+ CDS 157805 157951 . - 0 ID=cds-WP_158079660.1;Parent=gene-LP088_RS00775;Dbxref=Genbank:WP_158079660.1;Name=WP_158079660.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS00775;product=hypothetical protein;protein_id=WP_158079660.1;transl_table=11 NZ_CP087814.1 RefSeq gene 158010 158387 . - . ID=gene-LP088_RS00780;Name=LP088_RS00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00780;old_locus_tag=LP088_00775 NZ_CP087814.1 GeneMarkS-2+ CDS 158010 158387 . - 0 ID=cds-WP_078274367.1;Parent=gene-LP088_RS00780;Dbxref=Genbank:WP_078274367.1;Name=WP_078274367.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS00780;product=hypothetical protein;protein_id=WP_078274367.1;transl_table=11 NZ_CP087814.1 RefSeq gene 158528 158938 . + . ID=gene-LP088_RS00785;Name=LP088_RS00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00785;old_locus_tag=LP088_00780 NZ_CP087814.1 Protein Homology CDS 158528 158938 . + 0 ID=cds-WP_078274369.1;Parent=gene-LP088_RS00785;Dbxref=Genbank:WP_078274369.1;Name=WP_078274369.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024252.2;locus_tag=LP088_RS00785;product=helix-turn-helix transcriptional regulator;protein_id=WP_078274369.1;transl_table=11 NZ_CP087814.1 RefSeq gene 158954 159559 . - . ID=gene-LP088_RS00790;Name=LP088_RS00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00790;old_locus_tag=LP088_00785 NZ_CP087814.1 GeneMarkS-2+ CDS 158954 159559 . - 0 ID=cds-WP_078274371.1;Parent=gene-LP088_RS00790;Dbxref=Genbank:WP_078274371.1;Name=WP_078274371.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS00790;product=hypothetical protein;protein_id=WP_078274371.1;transl_table=11 NZ_CP087814.1 RefSeq gene 159615 160190 . - . ID=gene-LP088_RS00795;Name=LP088_RS00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00795;old_locus_tag=LP088_00790 NZ_CP087814.1 Protein Homology CDS 159615 160190 . - 0 ID=cds-WP_078274373.1;Parent=gene-LP088_RS00795;Dbxref=Genbank:WP_078274373.1;Name=WP_078274373.1;Ontology_term=GO:0006788,GO:0004392;gbkey=CDS;go_function=heme oxygenase (decyclizing) activity|0004392||IEA;go_process=heme oxidation|0006788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001052939.1;locus_tag=LP088_RS00795;product=biliverdin-producing heme oxygenase;protein_id=WP_078274373.1;transl_table=11 NZ_CP087814.1 RefSeq gene 160462 160911 . + . ID=gene-LP088_RS00800;Name=LP088_RS00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00800;old_locus_tag=LP088_00795 NZ_CP087814.1 Protein Homology CDS 160462 160911 . + 0 ID=cds-WP_078274375.1;Parent=gene-LP088_RS00800;Dbxref=Genbank:WP_078274375.1;Name=WP_078274375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003656837.1;locus_tag=LP088_RS00800;product=YbaN family protein;protein_id=WP_078274375.1;transl_table=11 NZ_CP087814.1 RefSeq gene 160985 162793 . + . ID=gene-LP088_RS00805;Name=LP088_RS00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00805;old_locus_tag=LP088_00800 NZ_CP087814.1 Protein Homology CDS 160985 162793 . + 0 ID=cds-WP_078274376.1;Parent=gene-LP088_RS00805;Dbxref=Genbank:WP_078274376.1;Name=WP_078274376.1;Ontology_term=GO:0008773;gbkey=CDS;go_function=[protein-PII] uridylyltransferase activity|0008773||IEA;inference=COORDINATES: protein motif:HMM:NF021824.2;locus_tag=LP088_RS00805;product=DUF294 nucleotidyltransferase-like domain-containing protein;protein_id=WP_078274376.1;transl_table=11 NZ_CP087814.1 RefSeq gene 162904 163491 . - . ID=gene-LP088_RS00810;Name=LP088_RS00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00810;old_locus_tag=LP088_00805 NZ_CP087814.1 GeneMarkS-2+ CDS 162904 163491 . - 0 ID=cds-WP_078274378.1;Parent=gene-LP088_RS00810;Dbxref=Genbank:WP_078274378.1;Name=WP_078274378.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS00810;product=hypothetical protein;protein_id=WP_078274378.1;transl_table=11 NZ_CP087814.1 RefSeq gene 163558 163680 . - . ID=gene-LP088_RS00815;Name=LP088_RS00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00815 NZ_CP087814.1 Protein Homology CDS 163558 163680 . - 0 ID=cds-WP_264676064.1;Parent=gene-LP088_RS00815;Dbxref=Genbank:WP_264676064.1;Name=WP_264676064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519441.1;locus_tag=LP088_RS00815;product=hypothetical protein;protein_id=WP_264676064.1;transl_table=11 NZ_CP087814.1 RefSeq gene 163713 164177 . - . ID=gene-LP088_RS00820;Name=LP088_RS00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00820;old_locus_tag=LP088_00810 NZ_CP087814.1 Protein Homology CDS 163713 164177 . - 0 ID=cds-WP_112742845.1;Parent=gene-LP088_RS00820;Dbxref=Genbank:WP_112742845.1;Name=WP_112742845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512726.1;locus_tag=LP088_RS00820;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_112742845.1;transl_table=11 NZ_CP087814.1 RefSeq gene 164317 165231 . + . ID=gene-LP088_RS00825;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=LP088_RS00825;old_locus_tag=LP088_00815 NZ_CP087814.1 Protein Homology CDS 164317 165231 . + 0 ID=cds-WP_078274380.1;Parent=gene-LP088_RS00825;Dbxref=Genbank:WP_078274380.1;Name=WP_078274380.1;Ontology_term=GO:0006810,GO:0005215,GO:0005886;gbkey=CDS;gene=rarD;go_component=plasma membrane|0005886||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: protein motif:HMM:TIGR00688.1;locus_tag=LP088_RS00825;product=EamA family transporter RarD;protein_id=WP_078274380.1;transl_table=11 NZ_CP087814.1 RefSeq gene 165239 166531 . - . ID=gene-LP088_RS00830;Name=argA;gbkey=Gene;gene=argA;gene_biotype=protein_coding;locus_tag=LP088_RS00830;old_locus_tag=LP088_00820 NZ_CP087814.1 Protein Homology CDS 165239 166531 . - 0 ID=cds-WP_078274382.1;Parent=gene-LP088_RS00830;Dbxref=Genbank:WP_078274382.1;Name=WP_078274382.1;Ontology_term=GO:0006526,GO:0004042;gbkey=CDS;gene=argA;go_function=acetyl-CoA:L-glutamate N-acetyltransferase activity|0004042||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201299.1;locus_tag=LP088_RS00830;product=amino-acid N-acetyltransferase;protein_id=WP_078274382.1;transl_table=11 NZ_CP087814.1 RefSeq gene 166774 167508 . + . ID=gene-LP088_RS00835;Name=LP088_RS00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00835;old_locus_tag=LP088_00825 NZ_CP087814.1 GeneMarkS-2+ CDS 166774 167508 . + 0 ID=cds-WP_228157722.1;Parent=gene-LP088_RS00835;Dbxref=Genbank:WP_228157722.1;Name=WP_228157722.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS00835;product=hypothetical protein;protein_id=WP_228157722.1;transl_table=11 NZ_CP087814.1 RefSeq gene 167766 169043 . + . ID=gene-LP088_RS00840;Name=LP088_RS00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00840;old_locus_tag=LP088_00830 NZ_CP087814.1 Protein Homology CDS 167766 169043 . + 0 ID=cds-WP_078274385.1;Parent=gene-LP088_RS00840;Dbxref=Genbank:WP_078274385.1;Name=WP_078274385.1;Ontology_term=GO:0006561,GO:0004350,GO:0016620;gbkey=CDS;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512692.1;locus_tag=LP088_RS00840;product=glutamate-5-semialdehyde dehydrogenase;protein_id=WP_078274385.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 169080 169882 . - . ID=gene-LP088_RS00845;Name=LP088_RS00845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS00845;old_locus_tag=LP088_00835;pseudo=true NZ_CP087814.1 Protein Homology CDS 169080 169882 . - 0 ID=cds-LP088_RS00845;Parent=gene-LP088_RS00845;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005228613.1;locus_tag=LP088_RS00845;product=NAD-dependent deacetylase;pseudo=true;transl_table=11 NZ_CP087814.1 RefSeq gene 169837 170178 . - . ID=gene-LP088_RS00850;Name=LP088_RS00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00850;old_locus_tag=LP088_00840 NZ_CP087814.1 GeneMarkS-2+ CDS 169837 170178 . - 0 ID=cds-WP_078274387.1;Parent=gene-LP088_RS00850;Dbxref=Genbank:WP_078274387.1;Name=WP_078274387.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS00850;product=hypothetical protein;protein_id=WP_078274387.1;transl_table=11 NZ_CP087814.1 RefSeq gene 170286 170660 . - . ID=gene-LP088_RS00855;Name=LP088_RS00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00855;old_locus_tag=LP088_00845 NZ_CP087814.1 GeneMarkS-2+ CDS 170286 170660 . - 0 ID=cds-WP_078274388.1;Parent=gene-LP088_RS00855;Dbxref=Genbank:WP_078274388.1;Name=WP_078274388.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS00855;product=hypothetical protein;protein_id=WP_078274388.1;transl_table=11 NZ_CP087814.1 RefSeq gene 170713 171240 . - . ID=gene-LP088_RS00860;Name=LP088_RS00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00860;old_locus_tag=LP088_00850 NZ_CP087814.1 GeneMarkS-2+ CDS 170713 171240 . - 0 ID=cds-WP_264676065.1;Parent=gene-LP088_RS00860;Dbxref=Genbank:WP_264676065.1;Name=WP_264676065.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS00860;product=hypothetical protein;protein_id=WP_264676065.1;transl_table=11 NZ_CP087814.1 RefSeq gene 171296 172765 . - . ID=gene-LP088_RS00865;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=LP088_RS00865;old_locus_tag=LP088_00855 NZ_CP087814.1 Protein Homology CDS 171296 172765 . - 0 ID=cds-WP_264676066.1;Parent=gene-LP088_RS00865;Dbxref=Genbank:WP_264676066.1;Name=WP_264676066.1;Ontology_term=GO:0016884;gbkey=CDS;gene=gatB;go_function=carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003668060.1;locus_tag=LP088_RS00865;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB;protein_id=WP_264676066.1;transl_table=11 NZ_CP087814.1 RefSeq gene 172799 173740 . - . ID=gene-LP088_RS00870;Name=bla;gbkey=Gene;gene=bla;gene_biotype=protein_coding;locus_tag=LP088_RS00870;old_locus_tag=LP088_00860 NZ_CP087814.1 Protein Homology CDS 172799 173740 . - 0 ID=cds-WP_036364342.1;Parent=gene-LP088_RS00870;Dbxref=Genbank:WP_036364342.1;Name=WP_036364342.1;Ontology_term=GO:0030655,GO:0046677,GO:0008800;gbkey=CDS;gene=bla;go_function=beta-lactamase activity|0008800||IEA;go_process=beta-lactam antibiotic catabolic process|0030655||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657002.1;locus_tag=LP088_RS00870;product=class A beta-lactamase;protein_id=WP_036364342.1;transl_table=11 NZ_CP087814.1 RefSeq gene 173795 175273 . - . ID=gene-LP088_RS00875;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=LP088_RS00875;old_locus_tag=LP088_00865 NZ_CP087814.1 Protein Homology CDS 173795 175273 . - 0 ID=cds-WP_264676067.1;Parent=gene-LP088_RS00875;Dbxref=Genbank:WP_264676067.1;Name=WP_264676067.1;Ontology_term=GO:0006424,GO:0050567,GO:0030956;gbkey=CDS;gene=gatA;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003668058.1;locus_tag=LP088_RS00875;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA;protein_id=WP_264676067.1;transl_table=11 NZ_CP087814.1 RefSeq gene 175407 175694 . - . ID=gene-LP088_RS00880;Name=gatC;gbkey=Gene;gene=gatC;gene_biotype=protein_coding;locus_tag=LP088_RS00880;old_locus_tag=LP088_00870 NZ_CP087814.1 Protein Homology CDS 175407 175694 . - 0 ID=cds-WP_112742709.1;Parent=gene-LP088_RS00880;Dbxref=Genbank:WP_112742709.1;Name=WP_112742709.1;Ontology_term=GO:0006424,GO:0050567,GO:0030956;gbkey=CDS;gene=gatC;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003663160.1;locus_tag=LP088_RS00880;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC;protein_id=WP_112742709.1;transl_table=11 NZ_CP087814.1 RefSeq gene 176061 177092 . + . ID=gene-LP088_RS00885;Name=LP088_RS00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00885;old_locus_tag=LP088_00875 NZ_CP087814.1 Protein Homology CDS 176061 177092 . + 0 ID=cds-WP_078274397.1;Parent=gene-LP088_RS00885;Dbxref=Genbank:WP_078274397.1;Name=WP_078274397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196659.1;locus_tag=LP088_RS00885;product=rod shape-determining protein;protein_id=WP_078274397.1;transl_table=11 NZ_CP087814.1 RefSeq gene 177186 178037 . + . ID=gene-LP088_RS00890;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=LP088_RS00890;old_locus_tag=LP088_00880 NZ_CP087814.1 Protein Homology CDS 177186 178037 . + 0 ID=cds-WP_112742708.1;Parent=gene-LP088_RS00890;Dbxref=Genbank:WP_112742708.1;Name=WP_112742708.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512847.1;locus_tag=LP088_RS00890;product=rod shape-determining protein MreC;protein_id=WP_112742708.1;transl_table=11 NZ_CP087814.1 RefSeq gene 178069 178557 . + . ID=gene-LP088_RS00895;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=LP088_RS00895;old_locus_tag=LP088_00885 NZ_CP087814.1 Protein Homology CDS 178069 178557 . + 0 ID=cds-WP_029102626.1;Parent=gene-LP088_RS00895;Dbxref=Genbank:WP_029102626.1;Name=WP_029102626.1;Ontology_term=GO:0008360,GO:0003674;gbkey=CDS;gene=mreD;go_function=molecular_function|0003674||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: protein motif:HMM:TIGR03426.1;locus_tag=LP088_RS00895;product=rod shape-determining protein MreD;protein_id=WP_029102626.1;transl_table=11 NZ_CP087814.1 RefSeq gene 178557 179144 . + . ID=gene-LP088_RS00900;Name=LP088_RS00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00900;old_locus_tag=LP088_00890 NZ_CP087814.1 Protein Homology CDS 178557 179144 . + 0 ID=cds-WP_112742707.1;Parent=gene-LP088_RS00900;Dbxref=Genbank:WP_112742707.1;Name=WP_112742707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196663.1;locus_tag=LP088_RS00900;product=Maf family protein;protein_id=WP_112742707.1;transl_table=11 NZ_CP087814.1 RefSeq gene 179296 180954 . + . ID=gene-LP088_RS00905;Name=LP088_RS00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS00905;old_locus_tag=LP088_00895 NZ_CP087814.1 Protein Homology CDS 179296 180954 . + 0 ID=cds-WP_112742706.1;Parent=gene-LP088_RS00905;Dbxref=Genbank:WP_112742706.1;Name=WP_112742706.1;Ontology_term=GO:0006401,GO:0004540;gbkey=CDS;go_function=ribonuclease activity|0004540||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: protein motif:HMM:TIGR00757.1;locus_tag=LP088_RS00905;product=Rne/Rng family ribonuclease;protein_id=WP_112742706.1;transl_table=11 NZ_CP087814.1 RefSeq gene 181433 181744 . + . ID=gene-LP088_RS00910;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=LP088_RS00910;old_locus_tag=LP088_00900 NZ_CP087814.1 Protein Homology CDS 181433 181744 . + 0 ID=cds-WP_003656991.1;Parent=gene-LP088_RS00910;Dbxref=Genbank:WP_003656991.1;Name=WP_003656991.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014268624.1;locus_tag=LP088_RS00910;product=30S ribosomal protein S10;protein_id=WP_003656991.1;transl_table=11 NZ_CP087814.1 RefSeq gene 181789 182427 . + . ID=gene-LP088_RS00915;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=LP088_RS00915;old_locus_tag=LP088_00905 NZ_CP087814.1 Protein Homology CDS 181789 182427 . + 0 ID=cds-WP_029102628.1;Parent=gene-LP088_RS00915;Dbxref=Genbank:WP_029102628.1;Name=WP_029102628.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004996809.1;locus_tag=LP088_RS00915;product=50S ribosomal protein L3;protein_id=WP_029102628.1;transl_table=11 NZ_CP087814.1 RefSeq gene 182442 183044 . + . ID=gene-LP088_RS00920;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=LP088_RS00920;old_locus_tag=LP088_00910 NZ_CP087814.1 Protein Homology CDS 182442 183044 . + 0 ID=cds-WP_078274407.1;Parent=gene-LP088_RS00920;Dbxref=Genbank:WP_078274407.1;Name=WP_078274407.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003656988.1;locus_tag=LP088_RS00920;product=50S ribosomal protein L4;protein_id=WP_078274407.1;transl_table=11 NZ_CP087814.1 RefSeq gene 183041 183370 . + . ID=gene-LP088_RS00925;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=LP088_RS00925;old_locus_tag=LP088_00915 NZ_CP087814.1 Protein Homology CDS 183041 183370 . + 0 ID=cds-WP_029102630.1;Parent=gene-LP088_RS00925;Dbxref=Genbank:WP_029102630.1;Name=WP_029102630.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplW;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003656987.1;locus_tag=LP088_RS00925;product=50S ribosomal protein L23;protein_id=WP_029102630.1;transl_table=11 NZ_CP087814.1 RefSeq gene 183382 184209 . + . ID=gene-LP088_RS00930;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=LP088_RS00930;old_locus_tag=LP088_00920 NZ_CP087814.1 Protein Homology CDS 183382 184209 . + 0 ID=cds-WP_029102631.1;Parent=gene-LP088_RS00930;Dbxref=Genbank:WP_029102631.1;Name=WP_029102631.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplB;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003674247.1;locus_tag=LP088_RS00930;product=50S ribosomal protein L2;protein_id=WP_029102631.1;transl_table=11 NZ_CP087814.1 RefSeq gene 184222 184497 . + . ID=gene-LP088_RS00935;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=LP088_RS00935;old_locus_tag=LP088_00925 NZ_CP087814.1 Protein Homology CDS 184222 184497 . + 0 ID=cds-WP_062498708.1;Parent=gene-LP088_RS00935;Dbxref=Genbank:WP_062498708.1;Name=WP_062498708.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsS;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004996805.1;locus_tag=LP088_RS00935;product=30S ribosomal protein S19;protein_id=WP_062498708.1;transl_table=11 NZ_CP087814.1 RefSeq gene 184507 184836 . + . ID=gene-LP088_RS00940;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=LP088_RS00940;old_locus_tag=LP088_00930 NZ_CP087814.1 Protein Homology CDS 184507 184836 . + 0 ID=cds-WP_029102633.1;Parent=gene-LP088_RS00940;Dbxref=Genbank:WP_029102633.1;Name=WP_029102633.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplV;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007115550.1;locus_tag=LP088_RS00940;product=50S ribosomal protein L22;protein_id=WP_029102633.1;transl_table=11 NZ_CP087814.1 RefSeq gene 184839 185564 . + . ID=gene-LP088_RS00945;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=LP088_RS00945;old_locus_tag=LP088_00935 NZ_CP087814.1 Protein Homology CDS 184839 185564 . + 0 ID=cds-WP_029102634.1;Parent=gene-LP088_RS00945;Dbxref=Genbank:WP_029102634.1;Name=WP_029102634.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsC;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512854.1;locus_tag=LP088_RS00945;product=30S ribosomal protein S3;protein_id=WP_029102634.1;transl_table=11 NZ_CP087814.1 RefSeq gene 185568 185981 . + . ID=gene-LP088_RS00950;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=LP088_RS00950;old_locus_tag=LP088_00940 NZ_CP087814.1 Protein Homology CDS 185568 185981 . + 0 ID=cds-WP_029102635.1;Parent=gene-LP088_RS00950;Dbxref=Genbank:WP_029102635.1;Name=WP_029102635.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplP;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017805229.1;locus_tag=LP088_RS00950;product=50S ribosomal protein L16;protein_id=WP_029102635.1;transl_table=11 NZ_CP087814.1 RefSeq gene 185981 186178 . + . ID=gene-LP088_RS00955;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=LP088_RS00955;old_locus_tag=LP088_00945 NZ_CP087814.1 Protein Homology CDS 185981 186178 . + 0 ID=cds-WP_029102636.1;Parent=gene-LP088_RS00955;Dbxref=Genbank:WP_029102636.1;Name=WP_029102636.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmC;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003656979.1;locus_tag=LP088_RS00955;product=50S ribosomal protein L29;protein_id=WP_029102636.1;transl_table=11 NZ_CP087814.1 RefSeq gene 186175 186447 . + . ID=gene-LP088_RS00960;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=LP088_RS00960;old_locus_tag=LP088_00950 NZ_CP087814.1 Protein Homology CDS 186175 186447 . + 0 ID=cds-WP_029102637.1;Parent=gene-LP088_RS00960;Dbxref=Genbank:WP_029102637.1;Name=WP_029102637.1;Ontology_term=GO:0006412,GO:0003735,GO:0022627;gbkey=CDS;gene=rpsQ;go_component=cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512856.1;locus_tag=LP088_RS00960;product=30S ribosomal protein S17;protein_id=WP_029102637.1;transl_table=11 NZ_CP087814.1 RefSeq gene 186579 186947 . + . ID=gene-LP088_RS00965;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=LP088_RS00965;old_locus_tag=LP088_00955 NZ_CP087814.1 Protein Homology CDS 186579 186947 . + 0 ID=cds-WP_029102638.1;Parent=gene-LP088_RS00965;Dbxref=Genbank:WP_029102638.1;Name=WP_029102638.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplN;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012728338.1;locus_tag=LP088_RS00965;product=50S ribosomal protein L14;protein_id=WP_029102638.1;transl_table=11 NZ_CP087814.1 RefSeq gene 186966 187283 . + . ID=gene-LP088_RS00970;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=LP088_RS00970;old_locus_tag=LP088_00960 NZ_CP087814.1 Protein Homology CDS 186966 187283 . + 0 ID=cds-WP_029102639.1;Parent=gene-LP088_RS00970;Dbxref=Genbank:WP_029102639.1;Name=WP_029102639.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplX;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512857.1;locus_tag=LP088_RS00970;product=50S ribosomal protein L24;protein_id=WP_029102639.1;transl_table=11 NZ_CP087814.1 RefSeq gene 187304 187840 . + . ID=gene-LP088_RS00975;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=LP088_RS00975;old_locus_tag=LP088_00965 NZ_CP087814.1 Protein Homology CDS 187304 187840 . + 0 ID=cds-WP_029102640.1;Parent=gene-LP088_RS00975;Dbxref=Genbank:WP_029102640.1;Name=WP_029102640.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004996797.1;locus_tag=LP088_RS00975;product=50S ribosomal protein L5;protein_id=WP_029102640.1;transl_table=11 NZ_CP087814.1 RefSeq gene 187851 188156 . + . ID=gene-LP088_RS00980;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=LP088_RS00980;old_locus_tag=LP088_00970 NZ_CP087814.1 Protein Homology CDS 187851 188156 . + 0 ID=cds-WP_029102641.1;Parent=gene-LP088_RS00980;Dbxref=Genbank:WP_029102641.1;Name=WP_029102641.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004924130.1;locus_tag=LP088_RS00980;product=30S ribosomal protein S14;protein_id=WP_029102641.1;transl_table=11 NZ_CP087814.1 RefSeq gene 188168 188566 . + . ID=gene-LP088_RS00985;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=LP088_RS00985;old_locus_tag=LP088_00975 NZ_CP087814.1 Protein Homology CDS 188168 188566 . + 0 ID=cds-WP_078274408.1;Parent=gene-LP088_RS00985;Dbxref=Genbank:WP_078274408.1;Name=WP_078274408.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011201192.1;locus_tag=LP088_RS00985;product=30S ribosomal protein S8;protein_id=WP_078274408.1;transl_table=11 NZ_CP087814.1 RefSeq gene 188750 189283 . + . ID=gene-LP088_RS00990;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=LP088_RS00990;old_locus_tag=LP088_00980 NZ_CP087814.1 Protein Homology CDS 188750 189283 . + 0 ID=cds-WP_065255090.1;Parent=gene-LP088_RS00990;Dbxref=Genbank:WP_065255090.1;Name=WP_065255090.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0022625;gbkey=CDS;gene=rplF;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003031129.1;locus_tag=LP088_RS00990;product=50S ribosomal protein L6;protein_id=WP_065255090.1;transl_table=11 NZ_CP087814.1 RefSeq gene 189302 189649 . + . ID=gene-LP088_RS00995;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=LP088_RS00995;old_locus_tag=LP088_00985 NZ_CP087814.1 Protein Homology CDS 189302 189649 . + 0 ID=cds-WP_029102644.1;Parent=gene-LP088_RS00995;Dbxref=Genbank:WP_029102644.1;Name=WP_029102644.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplR;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970258.1;locus_tag=LP088_RS00995;product=50S ribosomal protein L18;protein_id=WP_029102644.1;transl_table=11 NZ_CP087814.1 RefSeq gene 189652 190149 . + . ID=gene-LP088_RS01000;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=LP088_RS01000;old_locus_tag=LP088_00990 NZ_CP087814.1 Protein Homology CDS 189652 190149 . + 0 ID=cds-WP_029102645.1;Parent=gene-LP088_RS01000;Dbxref=Genbank:WP_029102645.1;Name=WP_029102645.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsE;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004996792.1;locus_tag=LP088_RS01000;product=30S ribosomal protein S5;protein_id=WP_029102645.1;transl_table=11 NZ_CP087814.1 RefSeq gene 190165 190344 . + . ID=gene-LP088_RS01005;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=LP088_RS01005;old_locus_tag=LP088_00995 NZ_CP087814.1 Protein Homology CDS 190165 190344 . + 0 ID=cds-WP_078274409.1;Parent=gene-LP088_RS01005;Dbxref=Genbank:WP_078274409.1;Name=WP_078274409.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmD;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279802.1;locus_tag=LP088_RS01005;product=50S ribosomal protein L30;protein_id=WP_078274409.1;transl_table=11 NZ_CP087814.1 RefSeq gene 190344 190784 . + . ID=gene-LP088_RS01010;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=LP088_RS01010;old_locus_tag=LP088_01000 NZ_CP087814.1 Protein Homology CDS 190344 190784 . + 0 ID=cds-WP_078274410.1;Parent=gene-LP088_RS01010;Dbxref=Genbank:WP_078274410.1;Name=WP_078274410.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplO;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005012960.1;locus_tag=LP088_RS01010;product=50S ribosomal protein L15;protein_id=WP_078274410.1;transl_table=11 NZ_CP087814.1 RefSeq gene 190788 192110 . + . ID=gene-LP088_RS01015;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=LP088_RS01015;old_locus_tag=LP088_01005 NZ_CP087814.1 Protein Homology CDS 190788 192110 . + 0 ID=cds-WP_078274411.1;Parent=gene-LP088_RS01015;Dbxref=Genbank:WP_078274411.1;Name=WP_078274411.1;Ontology_term=GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secY;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442813.1;locus_tag=LP088_RS01015;product=preprotein translocase subunit SecY;protein_id=WP_078274411.1;transl_table=11 NZ_CP087814.1 RefSeq gene 192125 192241 . + . ID=gene-LP088_RS01020;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=LP088_RS01020;old_locus_tag=LP088_01010 NZ_CP087814.1 Protein Homology CDS 192125 192241 . + 0 ID=cds-WP_036364264.1;Parent=gene-LP088_RS01020;Dbxref=Genbank:WP_036364264.1;Name=WP_036364264.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322760.1;locus_tag=LP088_RS01020;product=50S ribosomal protein L36;protein_id=WP_036364264.1;transl_table=11 NZ_CP087814.1 RefSeq gene 192370 192726 . + . ID=gene-LP088_RS01025;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=LP088_RS01025;old_locus_tag=LP088_01015 NZ_CP087814.1 Protein Homology CDS 192370 192726 . + 0 ID=cds-WP_029102649.1;Parent=gene-LP088_RS01025;Dbxref=Genbank:WP_029102649.1;Name=WP_029102649.1;Ontology_term=GO:0006412,GO:0003735,GO:0022627;gbkey=CDS;gene=rpsM;go_component=cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004996787.1;locus_tag=LP088_RS01025;product=30S ribosomal protein S13;protein_id=WP_029102649.1;transl_table=11 NZ_CP087814.1 RefSeq gene 192747 193139 . + . ID=gene-LP088_RS01030;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=LP088_RS01030;old_locus_tag=LP088_01020 NZ_CP087814.1 Protein Homology CDS 192747 193139 . + 0 ID=cds-WP_003656963.1;Parent=gene-LP088_RS01030;Dbxref=Genbank:WP_003656963.1;Name=WP_003656963.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1;locus_tag=LP088_RS01030;product=30S ribosomal protein S11;protein_id=WP_003656963.1;transl_table=11 NZ_CP087814.1 RefSeq gene 193150 193791 . + . ID=gene-LP088_RS01035;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=LP088_RS01035;old_locus_tag=LP088_01025 NZ_CP087814.1 Protein Homology CDS 193150 193791 . + 0 ID=cds-WP_029102650.1;Parent=gene-LP088_RS01035;Dbxref=Genbank:WP_029102650.1;Name=WP_029102650.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004924159.1;locus_tag=LP088_RS01035;product=30S ribosomal protein S4;protein_id=WP_029102650.1;transl_table=11 NZ_CP087814.1 RefSeq gene 193814 194818 . + . ID=gene-LP088_RS01040;Name=rpoA;gbkey=Gene;gene=rpoA;gene_biotype=protein_coding;locus_tag=LP088_RS01040;old_locus_tag=LP088_01030 NZ_CP087814.1 Protein Homology CDS 193814 194818 . + 0 ID=cds-WP_078274412.1;Parent=gene-LP088_RS01040;Dbxref=Genbank:WP_078274412.1;Name=WP_078274412.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899,GO:0046983;gbkey=CDS;gene=rpoA;go_function=DNA binding|0003677||IEA,DNA-directed 5'-3' RNA polymerase activity|0003899||IEA,protein dimerization activity|0046983||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003656959.1;locus_tag=LP088_RS01040;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_078274412.1;transl_table=11 NZ_CP087814.1 RefSeq gene 194837 195196 . + . ID=gene-LP088_RS01045;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=LP088_RS01045;old_locus_tag=LP088_01035 NZ_CP087814.1 Protein Homology CDS 194837 195196 . + 0 ID=cds-WP_029102652.1;Parent=gene-LP088_RS01045;Dbxref=Genbank:WP_029102652.1;Name=WP_029102652.1;Ontology_term=GO:0006412,GO:0003735,GO:0005762,GO:0022625;gbkey=CDS;gene=rplQ;go_component=mitochondrial large ribosomal subunit|0005762||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003656958.1;locus_tag=LP088_RS01045;product=50S ribosomal protein L17;protein_id=WP_029102652.1;transl_table=11 NZ_CP087814.1 RefSeq gene 195772 197298 . + . ID=gene-LP088_RS01050;Name=LP088_RS01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01050;old_locus_tag=LP088_01040 NZ_CP087814.1 Protein Homology CDS 195772 197298 . + 0 ID=cds-WP_078274413.1;Parent=gene-LP088_RS01050;Dbxref=Genbank:WP_078274413.1;Name=WP_078274413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657350.1;locus_tag=LP088_RS01050;product=fumarate hydratase;protein_id=WP_078274413.1;transl_table=11 NZ_CP087814.1 RefSeq gene 197382 198032 . - . ID=gene-LP088_RS01055;Name=LP088_RS01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01055;old_locus_tag=LP088_01045 NZ_CP087814.1 Protein Homology CDS 197382 198032 . - 0 ID=cds-WP_078274414.1;Parent=gene-LP088_RS01055;Dbxref=Genbank:WP_078274414.1;Name=WP_078274414.1;Ontology_term=GO:0005975,GO:0008967;gbkey=CDS;go_function=phosphoglycolate phosphatase activity|0008967||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010197259.1;locus_tag=LP088_RS01055;product=phosphoglycolate phosphatase;protein_id=WP_078274414.1;transl_table=11 NZ_CP087814.1 RefSeq gene 198531 199085 . + . ID=gene-LP088_RS01060;Name=LP088_RS01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01060;old_locus_tag=LP088_01050 NZ_CP087814.1 Protein Homology CDS 198531 199085 . + 0 ID=cds-WP_078274416.1;Parent=gene-LP088_RS01060;Dbxref=Genbank:WP_078274416.1;Name=WP_078274416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003671363.1;locus_tag=LP088_RS01060;product=porin family protein;protein_id=WP_078274416.1;transl_table=11 NZ_CP087814.1 RefSeq gene 199342 200454 . - . ID=gene-LP088_RS01065;Name=LP088_RS01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01065;old_locus_tag=LP088_01055 NZ_CP087814.1 Protein Homology CDS 199342 200454 . - 0 ID=cds-WP_228157860.1;Parent=gene-LP088_RS01065;Dbxref=Genbank:WP_228157860.1;Name=WP_228157860.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF019604.2;locus_tag=LP088_RS01065;product=FAD-dependent oxidoreductase;protein_id=WP_228157860.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 200515 200697 . - . ID=gene-LP088_RS01070;Name=LP088_RS01070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS01070;old_locus_tag=LP088_01060;partial=true;pseudo=true;start_range=.,200515 NZ_CP087814.1 Protein Homology CDS 200515 200697 . - 0 ID=cds-LP088_RS01070;Parent=gene-LP088_RS01070;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003417044.1;locus_tag=LP088_RS01070;partial=true;product=rubredoxin;pseudo=true;start_range=.,200515;transl_table=11 NZ_CP087814.1 RefSeq gene 200716 201834 . - . ID=gene-LP088_RS01075;Name=LP088_RS01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01075;old_locus_tag=LP088_01065 NZ_CP087814.1 Protein Homology CDS 200716 201834 . - 0 ID=cds-WP_078274418.1;Parent=gene-LP088_RS01075;Dbxref=Genbank:WP_078274418.1;Name=WP_078274418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519696.1;locus_tag=LP088_RS01075;product=acyl-CoA/acyl-ACP dehydrogenase;protein_id=WP_078274418.1;transl_table=11 NZ_CP087814.1 RefSeq gene 201944 203299 . - . ID=gene-LP088_RS01080;Name=LP088_RS01080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01080;old_locus_tag=LP088_01070 NZ_CP087814.1 Protein Homology CDS 201944 203299 . - 0 ID=cds-WP_078274419.1;Parent=gene-LP088_RS01080;Dbxref=Genbank:WP_078274419.1;Name=WP_078274419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004463205.1;locus_tag=LP088_RS01080;product=anthranilate synthase component I family protein;protein_id=WP_078274419.1;transl_table=11 NZ_CP087814.1 RefSeq gene 203365 203574 . - . ID=gene-LP088_RS01085;Name=LP088_RS01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01085;old_locus_tag=LP088_01075 NZ_CP087814.1 GeneMarkS-2+ CDS 203365 203574 . - 0 ID=cds-WP_078274420.1;Parent=gene-LP088_RS01085;Dbxref=Genbank:WP_078274420.1;Name=WP_078274420.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS01085;product=hypothetical protein;protein_id=WP_078274420.1;transl_table=11 NZ_CP087814.1 RefSeq gene 203879 205111 . - . ID=gene-LP088_RS01090;Name=LP088_RS01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01090;old_locus_tag=LP088_01080 NZ_CP087814.1 Protein Homology CDS 203879 205111 . - 0 ID=cds-WP_112742705.1;Parent=gene-LP088_RS01090;Dbxref=Genbank:WP_112742705.1;Name=WP_112742705.1;Note=FabB%2C beta-Ketoacyl-ACP synthase I%2C KASI%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005400178.1;locus_tag=LP088_RS01090;product=beta-ketoacyl-ACP synthase I;protein_id=WP_112742705.1;transl_table=11 NZ_CP087814.1 RefSeq gene 205417 206157 . - . ID=gene-LP088_RS01095;Name=ssb;gbkey=Gene;gene=ssb;gene_biotype=protein_coding;locus_tag=LP088_RS01095;old_locus_tag=LP088_01085 NZ_CP087814.1 Protein Homology CDS 205417 206157 . - 0 ID=cds-WP_112742704.1;Parent=gene-LP088_RS01095;Dbxref=Genbank:WP_112742704.1;Name=WP_112742704.1;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0006351,GO:0003697;gbkey=CDS;gene=ssb;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005095120.1;locus_tag=LP088_RS01095;product=single-stranded DNA-binding protein;protein_id=WP_112742704.1;transl_table=11 NZ_CP087814.1 RefSeq gene 206617 206934 . - . ID=gene-LP088_RS01100;Name=LP088_RS01100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01100;old_locus_tag=LP088_01090 NZ_CP087814.1 Protein Homology CDS 206617 206934 . - 0 ID=cds-WP_078274423.1;Parent=gene-LP088_RS01100;Dbxref=Genbank:WP_078274423.1;Name=WP_078274423.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013014.2;locus_tag=LP088_RS01100;product=H-NS histone family protein;protein_id=WP_078274423.1;transl_table=11 NZ_CP087814.1 RefSeq gene 207143 208213 . - . ID=gene-LP088_RS01105;Name=LP088_RS01105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01105;old_locus_tag=LP088_01095 NZ_CP087814.1 Protein Homology CDS 207143 208213 . - 0 ID=cds-WP_078274424.1;Parent=gene-LP088_RS01105;Dbxref=Genbank:WP_078274424.1;Name=WP_078274424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520691.1;locus_tag=LP088_RS01105;product=5'-nucleotidase;protein_id=WP_078274424.1;transl_table=11 NZ_CP087814.1 RefSeq gene 208500 208925 . - . ID=gene-LP088_RS01110;Name=LP088_RS01110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01110;old_locus_tag=LP088_01100 NZ_CP087814.1 Protein Homology CDS 208500 208925 . - 0 ID=cds-WP_078274425.1;Parent=gene-LP088_RS01110;Dbxref=Genbank:WP_078274425.1;Name=WP_078274425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019672687.1;locus_tag=LP088_RS01110;product=MAPEG family protein;protein_id=WP_078274425.1;transl_table=11 NZ_CP087814.1 RefSeq gene 208928 209341 . - . ID=gene-LP088_RS01115;Name=LP088_RS01115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01115;old_locus_tag=LP088_01105 NZ_CP087814.1 Protein Homology CDS 208928 209341 . - 0 ID=cds-WP_078274435.1;Parent=gene-LP088_RS01115;Dbxref=Genbank:WP_078274435.1;Name=WP_078274435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010111287.1;locus_tag=LP088_RS01115;product=OsmC family protein;protein_id=WP_078274435.1;transl_table=11 NZ_CP087814.1 RefSeq gene 209374 209559 . - . ID=gene-LP088_RS01120;Name=LP088_RS01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01120;old_locus_tag=LP088_01110 NZ_CP087814.1 GeneMarkS-2+ CDS 209374 209559 . - 0 ID=cds-WP_181879547.1;Parent=gene-LP088_RS01120;Dbxref=Genbank:WP_181879547.1;Name=WP_181879547.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS01120;product=hypothetical protein;protein_id=WP_181879547.1;transl_table=11 NZ_CP087814.1 RefSeq gene 209883 210374 . + . ID=gene-LP088_RS01125;Name=LP088_RS01125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01125;old_locus_tag=LP088_01115 NZ_CP087814.1 Protein Homology CDS 209883 210374 . + 0 ID=cds-WP_078274427.1;Parent=gene-LP088_RS01125;Dbxref=Genbank:WP_078274427.1;Name=WP_078274427.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019672691.1;locus_tag=LP088_RS01125;product=RNA pyrophosphohydrolase;protein_id=WP_078274427.1;transl_table=11 NZ_CP087814.1 RefSeq gene 210487 210807 . - . ID=gene-LP088_RS01130;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=LP088_RS01130;old_locus_tag=LP088_01120 NZ_CP087814.1 Protein Homology CDS 210487 210807 . - 0 ID=cds-WP_078274428.1;Parent=gene-LP088_RS01130;Dbxref=Genbank:WP_078274428.1;Name=WP_078274428.1;Ontology_term=GO:0015036,GO:0005737;gbkey=CDS;gene=trxA;go_component=cytoplasm|0005737||IEA;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020808024.1;locus_tag=LP088_RS01130;product=thioredoxin;protein_id=WP_078274428.1;transl_table=11 NZ_CP087814.1 RefSeq gene 211036 211779 . + . ID=gene-LP088_RS01135;Name=LP088_RS01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01135;old_locus_tag=LP088_01125 NZ_CP087814.1 Protein Homology CDS 211036 211779 . + 0 ID=cds-WP_078274429.1;Parent=gene-LP088_RS01135;Dbxref=Genbank:WP_078274429.1;Name=WP_078274429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003663606.1;locus_tag=LP088_RS01135;product=RluA family pseudouridine synthase;protein_id=WP_078274429.1;transl_table=11 NZ_CP087814.1 RefSeq gene 211795 213030 . - . ID=gene-LP088_RS01140;Name=LP088_RS01140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01140;old_locus_tag=LP088_01130 NZ_CP087814.1 GeneMarkS-2+ CDS 211795 213030 . - 0 ID=cds-WP_264676068.1;Parent=gene-LP088_RS01140;Dbxref=Genbank:WP_264676068.1;Name=WP_264676068.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS01140;product=hypothetical protein;protein_id=WP_264676068.1;transl_table=11 NZ_CP087814.1 RefSeq gene 213116 214054 . - . ID=gene-LP088_RS01145;Name=LP088_RS01145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01145;old_locus_tag=LP088_01135 NZ_CP087814.1 Protein Homology CDS 213116 214054 . - 0 ID=cds-WP_078274431.1;Parent=gene-LP088_RS01145;Dbxref=Genbank:WP_078274431.1;Name=WP_078274431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010197847.1;locus_tag=LP088_RS01145;product=D-2-hydroxyacid dehydrogenase;protein_id=WP_078274431.1;transl_table=11 NZ_CP087814.1 RefSeq gene 214133 215101 . - . ID=gene-LP088_RS01150;Name=LP088_RS01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01150;old_locus_tag=LP088_01140 NZ_CP087814.1 Protein Homology CDS 214133 215101 . - 0 ID=cds-WP_078274432.1;Parent=gene-LP088_RS01150;Dbxref=Genbank:WP_078274432.1;Name=WP_078274432.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025224.2;locus_tag=LP088_RS01150;product=leucine-rich repeat domain-containing protein;protein_id=WP_078274432.1;transl_table=11 NZ_CP087814.1 RefSeq gene 215652 215960 . + . ID=gene-LP088_RS01155;Name=LP088_RS01155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01155;old_locus_tag=LP088_01145 NZ_CP087814.1 Protein Homology CDS 215652 215960 . + 0 ID=cds-WP_112742399.1;Parent=gene-LP088_RS01155;Dbxref=Genbank:WP_112742399.1;Name=WP_112742399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004703692.1;locus_tag=LP088_RS01155;product=IS630 transposase-related protein;protein_id=WP_112742399.1;transl_table=11 NZ_CP087814.1 RefSeq gene 215922 216566 . - . ID=gene-LP088_RS01160;Name=LP088_RS01160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01160;old_locus_tag=LP088_01150 NZ_CP087814.1 Protein Homology CDS 215922 216566 . - 0 ID=cds-WP_264676069.1;Parent=gene-LP088_RS01160;Dbxref=Genbank:WP_264676069.1;Name=WP_264676069.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013584.2;locus_tag=LP088_RS01160;product=amidase family protein;protein_id=WP_264676069.1;transl_table=11 NZ_CP087814.1 RefSeq gene 216732 216854 . - . ID=gene-LP088_RS01165;Name=LP088_RS01165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01165 NZ_CP087814.1 Protein Homology CDS 216732 216854 . - 0 ID=cds-WP_264676070.1;Parent=gene-LP088_RS01165;Dbxref=Genbank:WP_264676070.1;Name=WP_264676070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519441.1;locus_tag=LP088_RS01165;product=hypothetical protein;protein_id=WP_264676070.1;transl_table=11 NZ_CP087814.1 RefSeq gene 216931 217356 . - . ID=gene-LP088_RS01170;Name=hemJ;gbkey=Gene;gene=hemJ;gene_biotype=protein_coding;locus_tag=LP088_RS01170;old_locus_tag=LP088_01155 NZ_CP087814.1 Protein Homology CDS 216931 217356 . - 0 ID=cds-WP_078274281.1;Parent=gene-LP088_RS01170;Dbxref=Genbank:WP_078274281.1;Name=WP_078274281.1;gbkey=CDS;gene=hemJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019673522.1;locus_tag=LP088_RS01170;product=protoporphyrinogen oxidase HemJ;protein_id=WP_078274281.1;transl_table=11 NZ_CP087814.1 RefSeq gene 217413 219263 . - . ID=gene-LP088_RS01175;Name=LP088_RS01175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01175;old_locus_tag=LP088_01160 NZ_CP087814.1 Protein Homology CDS 217413 219263 . - 0 ID=cds-WP_264676071.1;Parent=gene-LP088_RS01175;Dbxref=Genbank:WP_264676071.1;Name=WP_264676071.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012863.2;locus_tag=LP088_RS01175;product=autotransporter domain-containing protein;protein_id=WP_264676071.1;transl_table=11 NZ_CP087814.1 RefSeq gene 219421 220248 . - . ID=gene-LP088_RS01180;Name=LP088_RS01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01180;old_locus_tag=LP088_01165 NZ_CP087814.1 Protein Homology CDS 219421 220248 . - 0 ID=cds-WP_079326087.1;Parent=gene-LP088_RS01180;Dbxref=Genbank:WP_079326087.1;Name=WP_079326087.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012707.2;locus_tag=LP088_RS01180;product=transporter substrate-binding domain-containing protein;protein_id=WP_079326087.1;transl_table=11 NZ_CP087814.1 RefSeq gene 220390 221439 . - . ID=gene-LP088_RS01185;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=LP088_RS01185;old_locus_tag=LP088_01170 NZ_CP087814.1 Protein Homology CDS 220390 221439 . - 0 ID=cds-WP_112742701.1;Parent=gene-LP088_RS01185;Dbxref=Genbank:WP_112742701.1;Name=WP_112742701.1;Ontology_term=GO:0009102,GO:0004076,GO:0051537,GO:0051539,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003673627.1;locus_tag=LP088_RS01185;product=biotin synthase BioB;protein_id=WP_112742701.1;transl_table=11 NZ_CP087814.1 RefSeq gene 221562 221939 . - . ID=gene-LP088_RS01190;Name=LP088_RS01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01190;old_locus_tag=LP088_01175 NZ_CP087814.1 Protein Homology CDS 221562 221939 . - 0 ID=cds-WP_078274277.1;Parent=gene-LP088_RS01190;Dbxref=Genbank:WP_078274277.1;Name=WP_078274277.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015232.2;locus_tag=LP088_RS01190;product=roadblock/LC7 domain-containing protein;protein_id=WP_078274277.1;transl_table=11 NZ_CP087814.1 RefSeq gene 222308 224548 . - . ID=gene-LP088_RS01195;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=LP088_RS01195;old_locus_tag=LP088_01180 NZ_CP087814.1 Protein Homology CDS 222308 224548 . - 0 ID=cds-WP_112742700.1;Parent=gene-LP088_RS01195;Dbxref=Genbank:WP_112742700.1;Name=WP_112742700.1;Ontology_term=GO:0006401,GO:0008997;gbkey=CDS;gene=rnr;go_function=ribonuclease R activity|0008997||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010197318.1;locus_tag=LP088_RS01195;product=ribonuclease R;protein_id=WP_112742700.1;transl_table=11 NZ_CP087814.1 RefSeq gene 224631 225110 . + . ID=gene-LP088_RS01200;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=LP088_RS01200;old_locus_tag=LP088_01185 NZ_CP087814.1 Protein Homology CDS 224631 225110 . + 0 ID=cds-WP_112742699.1;Parent=gene-LP088_RS01200;Dbxref=Genbank:WP_112742699.1;Name=WP_112742699.1;Ontology_term=GO:0036211,GO:0042254,GO:0008999;gbkey=CDS;gene=rimI;go_function=peptide-alanine-alpha-N-acetyltransferase activity|0008999||IEA;go_process=protein modification process|0036211||IEA,ribosome biogenesis|0042254||IEA;inference=COORDINATES: protein motif:HMM:TIGR01575.1;locus_tag=LP088_RS01200;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_112742699.1;transl_table=11 NZ_CP087814.1 RefSeq gene 225253 225816 . - . ID=gene-LP088_RS01205;Name=LP088_RS01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01205;old_locus_tag=LP088_01190 NZ_CP087814.1 Protein Homology CDS 225253 225816 . - 0 ID=cds-WP_112742698.1;Parent=gene-LP088_RS01205;Dbxref=Genbank:WP_112742698.1;Name=WP_112742698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003673515.1;locus_tag=LP088_RS01205;product=NUDIX hydrolase;protein_id=WP_112742698.1;transl_table=11 NZ_CP087814.1 RefSeq gene 225865 226605 . + . ID=gene-LP088_RS01210;Name=LP088_RS01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01210;old_locus_tag=LP088_01195 NZ_CP087814.1 Protein Homology CDS 225865 226605 . + 0 ID=cds-WP_228157721.1;Parent=gene-LP088_RS01210;Dbxref=Genbank:WP_228157721.1;Name=WP_228157721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013107670.1;locus_tag=LP088_RS01210;product=NUDIX domain-containing protein;protein_id=WP_228157721.1;transl_table=11 NZ_CP087814.1 RefSeq gene 226635 227006 . - . ID=gene-LP088_RS01215;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=LP088_RS01215;old_locus_tag=LP088_01200 NZ_CP087814.1 Protein Homology CDS 226635 227006 . - 0 ID=cds-WP_078274271.1;Parent=gene-LP088_RS01215;Dbxref=Genbank:WP_078274271.1;Name=WP_078274271.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003656829.1;locus_tag=LP088_RS01215;product=ribosome silencing factor;protein_id=WP_078274271.1;transl_table=11 NZ_CP087814.1 RefSeq gene 227039 227722 . - . ID=gene-LP088_RS01220;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=LP088_RS01220;old_locus_tag=LP088_01205 NZ_CP087814.1 Protein Homology CDS 227039 227722 . - 0 ID=cds-WP_078274270.1;Parent=gene-LP088_RS01220;Dbxref=Genbank:WP_078274270.1;Name=WP_078274270.1;Ontology_term=GO:0009435,GO:0000309,GO:0004515,GO:0005737;gbkey=CDS;gene=nadD;go_component=cytoplasm|0005737||IEA;go_function=nicotinamide-nucleotide adenylyltransferase activity|0000309||IEA,nicotinate-nucleotide adenylyltransferase activity|0004515||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: protein motif:HMM:TIGR00482.1;locus_tag=LP088_RS01220;product=nicotinate (nicotinamide) nucleotide adenylyltransferase;protein_id=WP_078274270.1;transl_table=11 NZ_CP087814.1 RefSeq gene 227722 228543 . - . ID=gene-LP088_RS01225;Name=LP088_RS01225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01225;old_locus_tag=LP088_01210 NZ_CP087814.1 Protein Homology CDS 227722 228543 . - 0 ID=cds-WP_264676072.1;Parent=gene-LP088_RS01225;Dbxref=Genbank:WP_264676072.1;Name=WP_264676072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007115203.1;locus_tag=LP088_RS01225;product=NYN domain-containing protein;protein_id=WP_264676072.1;transl_table=11 NZ_CP087814.1 RefSeq gene 228627 229577 . + . ID=gene-LP088_RS01230;Name=LP088_RS01230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01230;old_locus_tag=LP088_01215 NZ_CP087814.1 GeneMarkS-2+ CDS 228627 229577 . + 0 ID=cds-WP_115368758.1;Parent=gene-LP088_RS01230;Dbxref=Genbank:WP_115368758.1;Name=WP_115368758.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS01230;product=hypothetical protein;protein_id=WP_115368758.1;transl_table=11 NZ_CP087814.1 RefSeq gene 229697 230734 . + . ID=gene-LP088_RS01235;Name=LP088_RS01235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01235;old_locus_tag=LP088_01220 NZ_CP087814.1 GeneMarkS-2+ CDS 229697 230734 . + 0 ID=cds-WP_264676073.1;Parent=gene-LP088_RS01235;Dbxref=Genbank:WP_264676073.1;Name=WP_264676073.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS01235;product=hypothetical protein;protein_id=WP_264676073.1;transl_table=11 NZ_CP087814.1 RefSeq gene 230745 231140 . + . ID=gene-LP088_RS01240;Name=LP088_RS01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01240;old_locus_tag=LP088_01225 NZ_CP087814.1 Protein Homology CDS 230745 231140 . + 0 ID=cds-WP_158079657.1;Parent=gene-LP088_RS01240;Dbxref=Genbank:WP_158079657.1;Name=WP_158079657.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018684.2;locus_tag=LP088_RS01240;product=DUF1311 domain-containing protein;protein_id=WP_158079657.1;transl_table=11 NZ_CP087814.1 RefSeq gene 231316 231759 . + . ID=gene-LP088_RS01245;Name=LP088_RS01245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01245;old_locus_tag=LP088_01230 NZ_CP087814.1 GeneMarkS-2+ CDS 231316 231759 . + 0 ID=cds-WP_158079656.1;Parent=gene-LP088_RS01245;Dbxref=Genbank:WP_158079656.1;Name=WP_158079656.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS01245;product=hypothetical protein;protein_id=WP_158079656.1;transl_table=11 NZ_CP087814.1 RefSeq gene 231737 232228 . + . ID=gene-LP088_RS01250;Name=LP088_RS01250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01250;old_locus_tag=LP088_01235 NZ_CP087814.1 GeneMarkS-2+ CDS 231737 232228 . + 0 ID=cds-WP_078274265.1;Parent=gene-LP088_RS01250;Dbxref=Genbank:WP_078274265.1;Name=WP_078274265.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS01250;product=hypothetical protein;protein_id=WP_078274265.1;transl_table=11 NZ_CP087814.1 RefSeq gene 232291 232494 . + . ID=gene-LP088_RS01255;Name=LP088_RS01255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01255;old_locus_tag=LP088_01240 NZ_CP087814.1 GeneMarkS-2+ CDS 232291 232494 . + 0 ID=cds-WP_143821688.1;Parent=gene-LP088_RS01255;Dbxref=Genbank:WP_143821688.1;Name=WP_143821688.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS01255;product=hypothetical protein;protein_id=WP_143821688.1;transl_table=11 NZ_CP087814.1 RefSeq gene 232491 232718 . + . ID=gene-LP088_RS01260;Name=LP088_RS01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01260;old_locus_tag=LP088_01245 NZ_CP087814.1 GeneMarkS-2+ CDS 232491 232718 . + 0 ID=cds-WP_078274263.1;Parent=gene-LP088_RS01260;Dbxref=Genbank:WP_078274263.1;Name=WP_078274263.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS01260;product=hypothetical protein;protein_id=WP_078274263.1;transl_table=11 NZ_CP087814.1 RefSeq gene 232871 233245 . + . ID=gene-LP088_RS01265;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=LP088_RS01265;old_locus_tag=LP088_01250 NZ_CP087814.1 Protein Homology CDS 232871 233245 . + 0 ID=cds-WP_029102685.1;Parent=gene-LP088_RS01265;Dbxref=Genbank:WP_029102685.1;Name=WP_029102685.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsL;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005306278.1;locus_tag=LP088_RS01265;product=30S ribosomal protein S12;protein_id=WP_029102685.1;transl_table=11 NZ_CP087814.1 RefSeq gene 233399 233872 . + . ID=gene-LP088_RS01270;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=LP088_RS01270;old_locus_tag=LP088_01255 NZ_CP087814.1 Protein Homology CDS 233399 233872 . + 0 ID=cds-WP_078274262.1;Parent=gene-LP088_RS01270;Dbxref=Genbank:WP_078274262.1;Name=WP_078274262.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsG;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742319.1;locus_tag=LP088_RS01270;product=30S ribosomal protein S7;protein_id=WP_078274262.1;transl_table=11 NZ_CP087814.1 RefSeq gene 233994 236120 . + . ID=gene-LP088_RS01275;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=LP088_RS01275;old_locus_tag=LP088_01260 NZ_CP087814.1 Protein Homology CDS 233994 236120 . + 0 ID=cds-WP_078274261.1;Parent=gene-LP088_RS01275;Dbxref=Genbank:WP_078274261.1;Name=WP_078274261.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004994399.1;locus_tag=LP088_RS01275;product=elongation factor G;protein_id=WP_078274261.1;transl_table=11 NZ_CP087814.1 RefSeq gene 236229 237419 . + . ID=gene-LP088_RS01280;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=LP088_RS01280;old_locus_tag=LP088_01265 NZ_CP087814.1 Protein Homology CDS 236229 237419 . + 0 ID=cds-WP_029102688.1;Parent=gene-LP088_RS01280;Dbxref=Genbank:WP_029102688.1;Name=WP_029102688.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011961077.1;locus_tag=LP088_RS01280;product=elongation factor Tu;protein_id=WP_029102688.1;transl_table=11 NZ_CP087814.1 RefSeq gene 237556 238395 . - . ID=gene-LP088_RS01285;Name=LP088_RS01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01285;old_locus_tag=LP088_01270 NZ_CP087814.1 Protein Homology CDS 237556 238395 . - 0 ID=cds-WP_078275290.1;Parent=gene-LP088_RS01285;Dbxref=Genbank:WP_078275290.1;Name=WP_078275290.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF012312.2;locus_tag=LP088_RS01285;product=MFS transporter;protein_id=WP_078275290.1;transl_table=11 NZ_CP087814.1 RefSeq gene 238663 239895 . + . ID=gene-LP088_RS01290;Name=LP088_RS01290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01290;old_locus_tag=LP088_01275 NZ_CP087814.1 Protein Homology CDS 238663 239895 . + 0 ID=cds-WP_228157719.1;Parent=gene-LP088_RS01290;Dbxref=Genbank:WP_228157719.1;Name=WP_228157719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003661097.1;locus_tag=LP088_RS01290;product=multidrug effflux MFS transporter;protein_id=WP_228157719.1;transl_table=11 NZ_CP087814.1 RefSeq gene 240201 240277 . + . ID=gene-LP088_RS01295;Name=LP088_RS01295;gbkey=Gene;gene_biotype=tRNA;locus_tag=LP088_RS01295;old_locus_tag=LP088_01280 NZ_CP087814.1 tRNAscan-SE tRNA 240201 240277 . + . ID=rna-LP088_RS01295;Parent=gene-LP088_RS01295;anticodon=(pos:240235..240237);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS01295;product=tRNA-Met NZ_CP087814.1 tRNAscan-SE exon 240201 240277 . + . ID=exon-LP088_RS01295-1;Parent=rna-LP088_RS01295;anticodon=(pos:240235..240237);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS01295;product=tRNA-Met NZ_CP087814.1 RefSeq gene 240485 240607 . + . ID=gene-LP088_RS01300;Name=LP088_RS01300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01300 NZ_CP087814.1 Protein Homology CDS 240485 240607 . + 0 ID=cds-WP_264676074.1;Parent=gene-LP088_RS01300;Dbxref=Genbank:WP_264676074.1;Name=WP_264676074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519441.1;locus_tag=LP088_RS01300;product=hypothetical protein;protein_id=WP_264676074.1;transl_table=11 NZ_CP087814.1 RefSeq gene 240714 241211 . + . ID=gene-LP088_RS01305;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=LP088_RS01305;old_locus_tag=LP088_01285 NZ_CP087814.1 Protein Homology CDS 240714 241211 . + 0 ID=cds-WP_078275289.1;Parent=gene-LP088_RS01305;Dbxref=Genbank:WP_078275289.1;Name=WP_078275289.1;gbkey=CDS;gene=rimP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003662890.1;locus_tag=LP088_RS01305;product=ribosome maturation factor RimP;protein_id=WP_078275289.1;transl_table=11 NZ_CP087814.1 RefSeq gene 241236 242717 . + . ID=gene-LP088_RS01310;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=LP088_RS01310;old_locus_tag=LP088_01290 NZ_CP087814.1 Protein Homology CDS 241236 242717 . + 0 ID=cds-WP_078275288.1;Parent=gene-LP088_RS01310;Dbxref=Genbank:WP_078275288.1;Name=WP_078275288.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657312.1;locus_tag=LP088_RS01310;product=transcription termination factor NusA;protein_id=WP_078275288.1;transl_table=11 NZ_CP087814.1 RefSeq gene 242916 245723 . + . ID=gene-LP088_RS01315;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=LP088_RS01315;old_locus_tag=LP088_01295 NZ_CP087814.1 Protein Homology CDS 242916 245723 . + 0 ID=cds-WP_078275287.1;Parent=gene-LP088_RS01315;Dbxref=Genbank:WP_078275287.1;Name=WP_078275287.1;Ontology_term=GO:0006413,GO:0003743,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011959452.1;locus_tag=LP088_RS01315;product=translation initiation factor IF-2;protein_id=WP_078275287.1;transl_table=11 NZ_CP087814.1 RefSeq gene 245797 246636 . + . ID=gene-LP088_RS01320;Name=LP088_RS01320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01320;old_locus_tag=LP088_01300 NZ_CP087814.1 Protein Homology CDS 245797 246636 . + 0 ID=cds-WP_158079716.1;Parent=gene-LP088_RS01320;Dbxref=Genbank:WP_158079716.1;Name=WP_158079716.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF025024.2;locus_tag=LP088_RS01320;product=2OG-Fe(II) oxygenase;protein_id=WP_158079716.1;transl_table=11 NZ_CP087814.1 RefSeq gene 246725 246976 . - . ID=gene-LP088_RS01325;Name=LP088_RS01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01325;old_locus_tag=LP088_01305 NZ_CP087814.1 Protein Homology CDS 246725 246976 . - 0 ID=cds-WP_078275285.1;Parent=gene-LP088_RS01325;Dbxref=Genbank:WP_078275285.1;Name=WP_078275285.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024252.2;locus_tag=LP088_RS01325;product=helix-turn-helix transcriptional regulator;protein_id=WP_078275285.1;transl_table=11 NZ_CP087814.1 RefSeq gene 247141 247308 . + . ID=gene-LP088_RS01330;Name=LP088_RS01330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01330;old_locus_tag=LP088_01310 NZ_CP087814.1 GeneMarkS-2+ CDS 247141 247308 . + 0 ID=cds-WP_158079715.1;Parent=gene-LP088_RS01330;Dbxref=Genbank:WP_158079715.1;Name=WP_158079715.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS01330;product=hypothetical protein;protein_id=WP_158079715.1;transl_table=11 NZ_CP087814.1 RefSeq gene 247271 247837 . + . ID=gene-LP088_RS01335;Name=LP088_RS01335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01335;old_locus_tag=LP088_01315 NZ_CP087814.1 GeneMarkS-2+ CDS 247271 247837 . + 0 ID=cds-WP_078275284.1;Parent=gene-LP088_RS01335;Dbxref=Genbank:WP_078275284.1;Name=WP_078275284.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS01335;product=hypothetical protein;protein_id=WP_078275284.1;transl_table=11 NZ_CP087814.1 RefSeq gene 247834 247983 . + . ID=gene-LP088_RS01340;Name=LP088_RS01340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01340;old_locus_tag=LP088_01320 NZ_CP087814.1 GeneMarkS-2+ CDS 247834 247983 . + 0 ID=cds-WP_158079714.1;Parent=gene-LP088_RS01340;Dbxref=Genbank:WP_158079714.1;Name=WP_158079714.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS01340;product=hypothetical protein;protein_id=WP_158079714.1;transl_table=11 NZ_CP087814.1 RefSeq gene 248048 248755 . + . ID=gene-LP088_RS01345;Name=LP088_RS01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01345;old_locus_tag=LP088_01325 NZ_CP087814.1 Protein Homology CDS 248048 248755 . + 0 ID=cds-WP_078275283.1;Parent=gene-LP088_RS01345;Dbxref=Genbank:WP_078275283.1;Name=WP_078275283.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025910.2;locus_tag=LP088_RS01345;product=tetratricopeptide repeat protein;protein_id=WP_078275283.1;transl_table=11 NZ_CP087814.1 RefSeq gene 248762 249085 . + . ID=gene-LP088_RS01350;Name=LP088_RS01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01350 NZ_CP087814.1 Protein Homology CDS 248762 249085 . + 0 ID=cds-WP_264676321.1;Parent=gene-LP088_RS01350;Dbxref=Genbank:WP_264676321.1;Name=WP_264676321.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016462.2;locus_tag=LP088_RS01350;product=surface lipoprotein assembly modifier;protein_id=WP_264676321.1;transl_table=11 NZ_CP087814.1 RefSeq gene 249082 249456 . + . ID=gene-LP088_RS01355;Name=LP088_RS01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01355 NZ_CP087814.1 Protein Homology CDS 249082 249456 . + 0 ID=cds-WP_112742695.1;Parent=gene-LP088_RS01355;Dbxref=Genbank:WP_112742695.1;Name=WP_112742695.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016462.2;locus_tag=LP088_RS01355;product=surface lipoprotein assembly modifier;protein_id=WP_112742695.1;transl_table=11 NZ_CP087814.1 RefSeq gene 249453 251144 . - . ID=gene-LP088_RS01360;Name=LP088_RS01360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01360;old_locus_tag=LP088_01335 NZ_CP087814.1 Protein Homology CDS 249453 251144 . - 0 ID=cds-WP_078274809.1;Parent=gene-LP088_RS01360;Dbxref=Genbank:WP_078274809.1;Name=WP_078274809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007395864.1;locus_tag=LP088_RS01360;product=hybrid sensor histidine kinase/response regulator;protein_id=WP_078274809.1;transl_table=11 NZ_CP087814.1 RefSeq gene 251272 251994 . - . ID=gene-LP088_RS01365;Name=LP088_RS01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01365;old_locus_tag=LP088_01340 NZ_CP087814.1 Protein Homology CDS 251272 251994 . - 0 ID=cds-WP_029103939.1;Parent=gene-LP088_RS01365;Dbxref=Genbank:WP_029103939.1;Name=WP_029103939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003656306.1;locus_tag=LP088_RS01365;product=response regulator transcription factor;protein_id=WP_029103939.1;transl_table=11 NZ_CP087814.1 RefSeq gene 252226 253503 . - . ID=gene-LP088_RS01370;Name=LP088_RS01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01370;old_locus_tag=LP088_01345 NZ_CP087814.1 GeneMarkS-2+ CDS 252226 253503 . - 0 ID=cds-WP_162860448.1;Parent=gene-LP088_RS01370;Dbxref=Genbank:WP_162860448.1;Name=WP_162860448.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS01370;product=hypothetical protein;protein_id=WP_162860448.1;transl_table=11 NZ_CP087814.1 RefSeq gene 253738 254085 . + . ID=gene-LP088_RS01375;Name=LP088_RS01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01375;old_locus_tag=LP088_01350 NZ_CP087814.1 Protein Homology CDS 253738 254085 . + 0 ID=cds-WP_036388546.1;Parent=gene-LP088_RS01375;Dbxref=Genbank:WP_036388546.1;Name=WP_036388546.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519386.1;locus_tag=LP088_RS01375;product=response regulator;protein_id=WP_036388546.1;transl_table=11 NZ_CP087814.1 RefSeq gene 254149 254523 . + . ID=gene-LP088_RS01380;Name=LP088_RS01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01380;old_locus_tag=LP088_01355 NZ_CP087814.1 Protein Homology CDS 254149 254523 . + 0 ID=cds-WP_078274806.1;Parent=gene-LP088_RS01380;Dbxref=Genbank:WP_078274806.1;Name=WP_078274806.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004994951.1;locus_tag=LP088_RS01380;product=response regulator;protein_id=WP_078274806.1;transl_table=11 NZ_CP087814.1 RefSeq gene 254527 255057 . + . ID=gene-LP088_RS01385;Name=LP088_RS01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01385;old_locus_tag=LP088_01360 NZ_CP087814.1 Protein Homology CDS 254527 255057 . + 0 ID=cds-WP_112742693.1;Parent=gene-LP088_RS01385;Dbxref=Genbank:WP_112742693.1;Name=WP_112742693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011281075.1;locus_tag=LP088_RS01385;product=chemotaxis protein CheW;protein_id=WP_112742693.1;transl_table=11 NZ_CP087814.1 RefSeq gene 255338 257401 . + . ID=gene-LP088_RS01390;Name=LP088_RS01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01390;old_locus_tag=LP088_01365 NZ_CP087814.1 Protein Homology CDS 255338 257401 . + 0 ID=cds-WP_228157718.1;Parent=gene-LP088_RS01390;Dbxref=Genbank:WP_228157718.1;Name=WP_228157718.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: protein motif:HMM:NF012245.2;locus_tag=LP088_RS01390;product=methyl-accepting chemotaxis protein;protein_id=WP_228157718.1;transl_table=11 NZ_CP087814.1 RefSeq gene 257421 258290 . + . ID=gene-LP088_RS01395;Name=LP088_RS01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01395;old_locus_tag=LP088_01370 NZ_CP087814.1 Protein Homology CDS 257421 258290 . + 0 ID=cds-WP_078274804.1;Parent=gene-LP088_RS01395;Dbxref=Genbank:WP_078274804.1;Name=WP_078274804.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013867.2;locus_tag=LP088_RS01395;product=hypothetical protein;protein_id=WP_078274804.1;transl_table=11 NZ_CP087814.1 RefSeq gene 258367 266520 . + . ID=gene-LP088_RS01400;Name=LP088_RS01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01400;old_locus_tag=LP088_01375 NZ_CP087814.1 Protein Homology CDS 258367 266520 . + 0 ID=cds-WP_264676075.1;Parent=gene-LP088_RS01400;Dbxref=Genbank:WP_264676075.1;Name=WP_264676075.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: protein motif:HMM:NF014567.2;locus_tag=LP088_RS01400;product=Hpt domain-containing protein;protein_id=WP_264676075.1;transl_table=11 NZ_CP087814.1 RefSeq gene 266551 267660 . + . ID=gene-LP088_RS01405;Name=LP088_RS01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01405;old_locus_tag=LP088_01380 NZ_CP087814.1 Protein Homology CDS 266551 267660 . + 0 ID=cds-WP_244893677.1;Parent=gene-LP088_RS01405;Dbxref=Genbank:WP_244893677.1;Name=WP_244893677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444248.1;locus_tag=LP088_RS01405;product=chemotaxis protein CheB;protein_id=WP_244893677.1;transl_table=11 NZ_CP087814.1 RefSeq gene 267787 268287 . + . ID=gene-LP088_RS01410;Name=LP088_RS01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01410;old_locus_tag=LP088_01385 NZ_CP087814.1 Protein Homology CDS 267787 268287 . + 0 ID=cds-WP_029103932.1;Parent=gene-LP088_RS01410;Dbxref=Genbank:WP_029103932.1;Name=WP_029103932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201616.1;locus_tag=LP088_RS01410;product=hypothetical protein;protein_id=WP_029103932.1;transl_table=11 NZ_CP087814.1 RefSeq gene 268372 268899 . + . ID=gene-LP088_RS01415;Name=LP088_RS01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01415;old_locus_tag=LP088_01390 NZ_CP087814.1 Protein Homology CDS 268372 268899 . + 0 ID=cds-WP_078274802.1;Parent=gene-LP088_RS01415;Dbxref=Genbank:WP_078274802.1;Name=WP_078274802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003656312.1;locus_tag=LP088_RS01415;product=cytochrome b;protein_id=WP_078274802.1;transl_table=11 NZ_CP087814.1 RefSeq gene 269473 272160 . + . ID=gene-LP088_RS01420;Name=LP088_RS01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01420;old_locus_tag=LP088_01395 NZ_CP087814.1 Protein Homology CDS 269473 272160 . + 0 ID=cds-WP_158079687.1;Parent=gene-LP088_RS01420;Dbxref=Genbank:WP_158079687.1;Name=WP_158079687.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01414.1;locus_tag=LP088_RS01420;product=autotransporter domain-containing protein;protein_id=WP_158079687.1;transl_table=11 NZ_CP087814.1 RefSeq gene 272415 273971 . - . ID=gene-LP088_RS01425;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=LP088_RS01425;old_locus_tag=LP088_01400 NZ_CP087814.1 Protein Homology CDS 272415 273971 . - 0 ID=cds-WP_078274800.1;Parent=gene-LP088_RS01425;Dbxref=Genbank:WP_078274800.1;Name=WP_078274800.1;Ontology_term=GO:0006805,GO:0009398,GO:0016668;gbkey=CDS;gene=ahpF;go_function=oxidoreductase activity%2C acting on a sulfur group of donors%2C NAD(P) as acceptor|0016668||IEA;go_process=xenobiotic metabolic process|0006805||IEA,FMN biosynthetic process|0009398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003656434.1;locus_tag=LP088_RS01425;product=alkyl hydroperoxide reductase subunit F;protein_id=WP_078274800.1;transl_table=11 NZ_CP087814.1 RefSeq gene 274079 274261 . - . ID=gene-LP088_RS01430;Name=LP088_RS01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01430;old_locus_tag=LP088_01405 NZ_CP087814.1 GeneMarkS-2+ CDS 274079 274261 . - 0 ID=cds-WP_078274799.1;Parent=gene-LP088_RS01430;Dbxref=Genbank:WP_078274799.1;Name=WP_078274799.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS01430;product=hypothetical protein;protein_id=WP_078274799.1;transl_table=11 NZ_CP087814.1 RefSeq gene 274260 274481 . + . ID=gene-LP088_RS01435;Name=LP088_RS01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01435;old_locus_tag=LP088_01410 NZ_CP087814.1 Protein Homology CDS 274260 274481 . + 0 ID=cds-WP_078274798.1;Parent=gene-LP088_RS01435;Dbxref=Genbank:WP_078274798.1;Name=WP_078274798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004902383.1;locus_tag=LP088_RS01435;product=YdcH family protein;protein_id=WP_078274798.1;transl_table=11 NZ_CP087814.1 RefSeq gene 274574 275275 . - . ID=gene-LP088_RS01440;Name=LP088_RS01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01440;old_locus_tag=LP088_01415 NZ_CP087814.1 Protein Homology CDS 274574 275275 . - 0 ID=cds-WP_264676051.1;Parent=gene-LP088_RS01440;Dbxref=Genbank:WP_264676051.1;Name=WP_264676051.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015586042.1;locus_tag=LP088_RS01440;product=IS1 family transposase;protein_id=WP_264676051.1;transl_table=11 NZ_CP087814.1 RefSeq gene 275401 276009 . - . ID=gene-LP088_RS01445;Name=LP088_RS01445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01445;old_locus_tag=LP088_01420 NZ_CP087814.1 GeneMarkS-2+ CDS 275401 276009 . - 0 ID=cds-WP_078275223.1;Parent=gene-LP088_RS01445;Dbxref=Genbank:WP_078275223.1;Name=WP_078275223.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS01445;product=hypothetical protein;protein_id=WP_078275223.1;transl_table=11 NZ_CP087814.1 RefSeq gene 276174 276740 . - . ID=gene-LP088_RS01450;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=LP088_RS01450;old_locus_tag=LP088_01425 NZ_CP087814.1 Protein Homology CDS 276174 276740 . - 0 ID=cds-WP_078275222.1;Parent=gene-LP088_RS01450;Dbxref=Genbank:WP_078275222.1;Name=WP_078275222.1;Ontology_term=GO:0006979,GO:0102039;gbkey=CDS;gene=ahpC;go_function=NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003656441.1;locus_tag=LP088_RS01450;product=alkyl hydroperoxide reductase subunit C;protein_id=WP_078275222.1;transl_table=11 NZ_CP087814.1 RefSeq gene 276944 277840 . + . ID=gene-LP088_RS01455;Name=LP088_RS01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01455;old_locus_tag=LP088_01430 NZ_CP087814.1 Protein Homology CDS 276944 277840 . + 0 ID=cds-WP_078275221.1;Parent=gene-LP088_RS01455;Dbxref=Genbank:WP_078275221.1;Name=WP_078275221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007395850.1;locus_tag=LP088_RS01455;product=hydrogen peroxide-inducible genes activator;protein_id=WP_078275221.1;transl_table=11 NZ_CP087814.1 RefSeq gene 277846 278514 . - . ID=gene-LP088_RS01460;Name=LP088_RS01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01460;old_locus_tag=LP088_01435 NZ_CP087814.1 Protein Homology CDS 277846 278514 . - 0 ID=cds-WP_078275220.1;Parent=gene-LP088_RS01460;Dbxref=Genbank:WP_078275220.1;Name=WP_078275220.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013980.2;locus_tag=LP088_RS01460;product=DUF45 domain-containing protein;protein_id=WP_078275220.1;transl_table=11 NZ_CP087814.1 RefSeq gene 278632 279276 . - . ID=gene-LP088_RS01465;Name=LP088_RS01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01465;old_locus_tag=LP088_01440 NZ_CP087814.1 Protein Homology CDS 278632 279276 . - 0 ID=cds-WP_078275219.1;Parent=gene-LP088_RS01465;Dbxref=Genbank:WP_078275219.1;Name=WP_078275219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011961359.1;locus_tag=LP088_RS01465;product=OmpA family protein;protein_id=WP_078275219.1;transl_table=11 NZ_CP087814.1 RefSeq gene 280009 280968 . + . ID=gene-LP088_RS01470;Name=LP088_RS01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01470;old_locus_tag=LP088_01445 NZ_CP087814.1 Protein Homology CDS 280009 280968 . + 0 ID=cds-WP_078275228.1;Parent=gene-LP088_RS01470;Dbxref=Genbank:WP_078275228.1;Name=WP_078275228.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199077.1;locus_tag=LP088_RS01470;product=acetyltransferase;protein_id=WP_078275228.1;transl_table=11 NZ_CP087814.1 RefSeq gene 281275 282381 . + . ID=gene-LP088_RS01475;Name=LP088_RS01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01475;old_locus_tag=LP088_01450 NZ_CP087814.1 GeneMarkS-2+ CDS 281275 282381 . + 0 ID=cds-WP_078275218.1;Parent=gene-LP088_RS01475;Dbxref=Genbank:WP_078275218.1;Name=WP_078275218.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS01475;product=hypothetical protein;protein_id=WP_078275218.1;transl_table=11 NZ_CP087814.1 RefSeq gene 282644 283477 . + . ID=gene-LP088_RS01480;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=LP088_RS01480;old_locus_tag=LP088_01455 NZ_CP087814.1 Protein Homology CDS 282644 283477 . + 0 ID=cds-WP_078275227.1;Parent=gene-LP088_RS01480;Dbxref=Genbank:WP_078275227.1;Name=WP_078275227.1;Ontology_term=GO:0000918,GO:0004857;gbkey=CDS;gene=minC;go_function=enzyme inhibitor activity|0004857||IEA;go_process=division septum site selection|0000918||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657011.1;locus_tag=LP088_RS01480;product=septum site-determining protein MinC;protein_id=WP_078275227.1;transl_table=11 NZ_CP087814.1 RefSeq gene 283927 284742 . + . ID=gene-LP088_RS01485;Name=minD;gbkey=Gene;gene=minD;gene_biotype=protein_coding;locus_tag=LP088_RS01485;old_locus_tag=LP088_01460 NZ_CP087814.1 Protein Homology CDS 283927 284742 . + 0 ID=cds-WP_078275217.1;Parent=gene-LP088_RS01485;Dbxref=Genbank:WP_078275217.1;Name=WP_078275217.1;Ontology_term=GO:0000918,GO:0016887;gbkey=CDS;gene=minD;go_function=ATP hydrolysis activity|0016887||IEA;go_process=division septum site selection|0000918||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657013.1;locus_tag=LP088_RS01485;product=septum site-determining protein MinD;protein_id=WP_078275217.1;transl_table=11 NZ_CP087814.1 RefSeq gene 284744 285019 . + . ID=gene-LP088_RS01490;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=LP088_RS01490;old_locus_tag=LP088_01465 NZ_CP087814.1 Protein Homology CDS 284744 285019 . + 0 ID=cds-WP_029103917.1;Parent=gene-LP088_RS01490;Dbxref=Genbank:WP_029103917.1;Name=WP_029103917.1;Ontology_term=GO:0032955;gbkey=CDS;gene=minE;go_process=regulation of division septum assembly|0032955||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657015.1;locus_tag=LP088_RS01490;product=cell division topological specificity factor MinE;protein_id=WP_029103917.1;transl_table=11 NZ_CP087814.1 RefSeq gene 285114 285662 . - . ID=gene-LP088_RS01495;Name=LP088_RS01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01495;old_locus_tag=LP088_01470 NZ_CP087814.1 Protein Homology CDS 285114 285662 . - 0 ID=cds-WP_078275216.1;Parent=gene-LP088_RS01495;Dbxref=Genbank:WP_078275216.1;Name=WP_078275216.1;Ontology_term=GO:0003725;gbkey=CDS;go_function=double-stranded RNA binding|0003725||IEA;inference=COORDINATES: protein motif:HMM:NF013468.2;locus_tag=LP088_RS01495;product=Sua5/YciO/YrdC/YwlC family protein;protein_id=WP_078275216.1;transl_table=11 NZ_CP087814.1 RefSeq gene 285732 286412 . - . ID=gene-LP088_RS01500;Name=LP088_RS01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01500;old_locus_tag=LP088_01475 NZ_CP087814.1 Protein Homology CDS 285732 286412 . - 0 ID=cds-WP_078275215.1;Parent=gene-LP088_RS01500;Dbxref=Genbank:WP_078275215.1;Name=WP_078275215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003656955.1;locus_tag=LP088_RS01500;product=elongation factor P hydroxylase;protein_id=WP_078275215.1;transl_table=11 NZ_CP087814.1 RefSeq gene 286523 287074 . + . ID=gene-LP088_RS01505;Name=LP088_RS01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01505;old_locus_tag=LP088_01480 NZ_CP087814.1 Protein Homology CDS 286523 287074 . + 0 ID=cds-WP_078275214.1;Parent=gene-LP088_RS01505;Dbxref=Genbank:WP_078275214.1;Name=WP_078275214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003656953.1;locus_tag=LP088_RS01505;product=YceD family protein;protein_id=WP_078275214.1;transl_table=11 NZ_CP087814.1 RefSeq gene 287249 287431 . + . ID=gene-LP088_RS01510;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=LP088_RS01510;old_locus_tag=LP088_01485 NZ_CP087814.1 Protein Homology CDS 287249 287431 . + 0 ID=cds-WP_029103914.1;Parent=gene-LP088_RS01510;Dbxref=Genbank:WP_029103914.1;Name=WP_029103914.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmF;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003656952.1;locus_tag=LP088_RS01510;product=50S ribosomal protein L32;protein_id=WP_029103914.1;transl_table=11 NZ_CP087814.1 RefSeq gene 287718 288665 . + . ID=gene-LP088_RS01515;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=LP088_RS01515;old_locus_tag=LP088_01490 NZ_CP087814.1 Protein Homology CDS 287718 288665 . + 0 ID=cds-WP_078275226.1;Parent=gene-LP088_RS01515;Dbxref=Genbank:WP_078275226.1;Name=WP_078275226.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019671663.1;locus_tag=LP088_RS01515;product=ACP S-malonyltransferase;protein_id=WP_078275226.1;transl_table=11 NZ_CP087814.1 RefSeq gene 288655 289383 . + . ID=gene-LP088_RS01520;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=LP088_RS01520;old_locus_tag=LP088_01495 NZ_CP087814.1 Protein Homology CDS 288655 289383 . + 0 ID=cds-WP_029103912.1;Parent=gene-LP088_RS01520;Dbxref=Genbank:WP_029103912.1;Name=WP_029103912.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003665563.1;locus_tag=LP088_RS01520;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_029103912.1;transl_table=11 NZ_CP087814.1 RefSeq gene 289541 289774 . + . ID=gene-LP088_RS01525;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=LP088_RS01525;old_locus_tag=LP088_01500 NZ_CP087814.1 Protein Homology CDS 289541 289774 . + 0 ID=cds-WP_029103911.1;Parent=gene-LP088_RS01525;Dbxref=Genbank:WP_029103911.1;Name=WP_029103911.1;Ontology_term=GO:0006633;gbkey=CDS;gene=acpP;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004922143.1;locus_tag=LP088_RS01525;product=acyl carrier protein;protein_id=WP_029103911.1;transl_table=11 NZ_CP087814.1 RefSeq gene 290181 290672 . + . ID=gene-LP088_RS01530;Name=lysM;gbkey=Gene;gene=lysM;gene_biotype=protein_coding;locus_tag=LP088_RS01530;old_locus_tag=LP088_01505 NZ_CP087814.1 Protein Homology CDS 290181 290672 . + 0 ID=cds-WP_078275213.1;Parent=gene-LP088_RS01530;Dbxref=Genbank:WP_078275213.1;Name=WP_078275213.1;gbkey=CDS;gene=lysM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004972325.1;locus_tag=LP088_RS01530;product=peptidoglycan-binding protein LysM;protein_id=WP_078275213.1;transl_table=11 NZ_CP087814.1 RefSeq gene 290985 291632 . - . ID=gene-LP088_RS01535;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=LP088_RS01535;old_locus_tag=LP088_01510 NZ_CP087814.1 Protein Homology CDS 290985 291632 . - 0 ID=cds-WP_115369352.1;Parent=gene-LP088_RS01535;Dbxref=Genbank:WP_115369352.1;Name=WP_115369352.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003661086.1;locus_tag=LP088_RS01535;product=dephospho-CoA kinase;protein_id=WP_115369352.1;transl_table=11 NZ_CP087814.1 RefSeq gene 291853 292902 . + . ID=gene-LP088_RS01540;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=LP088_RS01540;old_locus_tag=LP088_01515 NZ_CP087814.1 Protein Homology CDS 291853 292902 . + 0 ID=cds-WP_078275212.1;Parent=gene-LP088_RS01540;Dbxref=Genbank:WP_078275212.1;Name=WP_078275212.1;Ontology_term=GO:0006400;gbkey=CDS;gene=tsaD;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003663506.1;locus_tag=LP088_RS01540;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_078275212.1;transl_table=11 NZ_CP087814.1 RefSeq gene 292954 296151 . + . ID=gene-LP088_RS01545;Name=LP088_RS01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01545;old_locus_tag=LP088_01520 NZ_CP087814.1 Protein Homology CDS 292954 296151 . + 0 ID=cds-WP_264676322.1;Parent=gene-LP088_RS01545;Dbxref=Genbank:WP_264676322.1;Name=WP_264676322.1;Ontology_term=GO:0006306,GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;go_process=DNA methylation|0006306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000615758.1;locus_tag=LP088_RS01545;product=N-6 DNA methylase;protein_id=WP_264676322.1;transl_table=11 NZ_CP087814.1 RefSeq gene 296182 296841 . - . ID=gene-LP088_RS01550;Name=LP088_RS01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01550;old_locus_tag=LP088_01525 NZ_CP087814.1 Protein Homology CDS 296182 296841 . - 0 ID=cds-WP_264676076.1;Parent=gene-LP088_RS01550;Dbxref=Genbank:WP_264676076.1;Name=WP_264676076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011961378.1;locus_tag=LP088_RS01550;product=heme exporter protein CcmB;protein_id=WP_264676076.1;transl_table=11 NZ_CP087814.1 RefSeq gene 296838 297440 . - . ID=gene-LP088_RS01555;Name=ccmA;gbkey=Gene;gene=ccmA;gene_biotype=protein_coding;locus_tag=LP088_RS01555;old_locus_tag=LP088_01530 NZ_CP087814.1 Protein Homology CDS 296838 297440 . - 0 ID=cds-WP_078275209.1;Parent=gene-LP088_RS01555;Dbxref=Genbank:WP_078275209.1;Name=WP_078275209.1;Ontology_term=GO:0015886,GO:0015439,GO:0043190;gbkey=CDS;gene=ccmA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type heme transporter activity|0015439||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444262.1;locus_tag=LP088_RS01555;product=heme ABC exporter ATP-binding protein CcmA;protein_id=WP_078275209.1;transl_table=11 NZ_CP087814.1 RefSeq gene 297605 297844 . + . ID=gene-LP088_RS01560;Name=LP088_RS01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01560;old_locus_tag=LP088_01535 NZ_CP087814.1 GeneMarkS-2+ CDS 297605 297844 . + 0 ID=cds-WP_078275208.1;Parent=gene-LP088_RS01560;Dbxref=Genbank:WP_078275208.1;Name=WP_078275208.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS01560;product=hypothetical protein;protein_id=WP_078275208.1;transl_table=11 NZ_CP087814.1 RefSeq gene 297889 298287 . + . ID=gene-LP088_RS01565;Name=LP088_RS01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01565;old_locus_tag=LP088_01540 NZ_CP087814.1 GeneMarkS-2+ CDS 297889 298287 . + 0 ID=cds-WP_078275207.1;Parent=gene-LP088_RS01565;Dbxref=Genbank:WP_078275207.1;Name=WP_078275207.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS01565;product=hypothetical protein;protein_id=WP_078275207.1;transl_table=11 NZ_CP087814.1 RefSeq gene 298572 299246 . + . ID=gene-LP088_RS01570;Name=LP088_RS01570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01570;old_locus_tag=LP088_01545 NZ_CP087814.1 GeneMarkS-2+ CDS 298572 299246 . + 0 ID=cds-WP_078275205.1;Parent=gene-LP088_RS01570;Dbxref=Genbank:WP_078275205.1;Name=WP_078275205.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS01570;product=hypothetical protein;protein_id=WP_078275205.1;transl_table=11 NZ_CP087814.1 RefSeq gene 299252 300166 . + . ID=gene-LP088_RS01575;Name=LP088_RS01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01575;old_locus_tag=LP088_01550 NZ_CP087814.1 Protein Homology CDS 299252 300166 . + 0 ID=cds-WP_264676077.1;Parent=gene-LP088_RS01575;Dbxref=Genbank:WP_264676077.1;Name=WP_264676077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520629.1;locus_tag=LP088_RS01575;product=histone deacetylase;protein_id=WP_264676077.1;transl_table=11 NZ_CP087814.1 RefSeq gene 300150 301061 . - . ID=gene-LP088_RS01580;Name=LP088_RS01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01580;old_locus_tag=LP088_01555 NZ_CP087814.1 Protein Homology CDS 300150 301061 . - 0 ID=cds-WP_078275224.1;Parent=gene-LP088_RS01580;Dbxref=Genbank:WP_078275224.1;Name=WP_078275224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005093710.1;locus_tag=LP088_RS01580;product=DUF5655 domain-containing protein;protein_id=WP_078275224.1;transl_table=11 NZ_CP087814.1 RefSeq gene 301078 302196 . - . ID=gene-LP088_RS01585;Name=LP088_RS01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01585;old_locus_tag=LP088_01560 NZ_CP087814.1 Protein Homology CDS 301078 302196 . - 0 ID=cds-WP_078275203.1;Parent=gene-LP088_RS01585;Dbxref=Genbank:WP_078275203.1;Name=WP_078275203.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033543.1;locus_tag=LP088_RS01585;product=IS256 family transposase;protein_id=WP_078275203.1;transl_table=11 NZ_CP087814.1 RefSeq gene 302294 302995 . + . ID=gene-LP088_RS01590;Name=LP088_RS01590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01590;old_locus_tag=LP088_01565 NZ_CP087814.1 Protein Homology CDS 302294 302995 . + 0 ID=cds-WP_264676051.1-2;Parent=gene-LP088_RS01590;Dbxref=Genbank:WP_264676051.1;Name=WP_264676051.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015586042.1;locus_tag=LP088_RS01590;product=IS1 family transposase;protein_id=WP_264676051.1;transl_table=11 NZ_CP087814.1 RefSeq gene 303148 303969 . - . ID=gene-LP088_RS01595;Name=LP088_RS01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01595;old_locus_tag=LP088_01570 NZ_CP087814.1 Protein Homology CDS 303148 303969 . - 0 ID=cds-WP_078274861.1;Parent=gene-LP088_RS01595;Dbxref=Genbank:WP_078274861.1;Name=WP_078274861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003659193.1;locus_tag=LP088_RS01595;product=site-specific DNA-methyltransferase;protein_id=WP_078274861.1;transl_table=11 NZ_CP087814.1 RefSeq gene 303971 304813 . - . ID=gene-LP088_RS01600;Name=LP088_RS01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01600;old_locus_tag=LP088_01575 NZ_CP087814.1 Protein Homology CDS 303971 304813 . - 0 ID=cds-WP_078274860.1;Parent=gene-LP088_RS01600;Dbxref=Genbank:WP_078274860.1;Name=WP_078274860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003659192.1;locus_tag=LP088_RS01600;product=type II restriction endonuclease;protein_id=WP_078274860.1;transl_table=11 NZ_CP087814.1 RefSeq gene 304815 305699 . - . ID=gene-LP088_RS01605;Name=LP088_RS01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01605;old_locus_tag=LP088_01580 NZ_CP087814.1 Protein Homology CDS 304815 305699 . - 0 ID=cds-WP_078274859.1;Parent=gene-LP088_RS01605;Dbxref=Genbank:WP_078274859.1;Name=WP_078274859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003659191.1;locus_tag=LP088_RS01605;product=DNA adenine methylase;protein_id=WP_078274859.1;transl_table=11 NZ_CP087814.1 RefSeq gene 305753 308605 . - . ID=gene-LP088_RS01610;Name=LP088_RS01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01610;old_locus_tag=LP088_01585 NZ_CP087814.1 Protein Homology CDS 305753 308605 . - 0 ID=cds-WP_115368724.1;Parent=gene-LP088_RS01610;Dbxref=Genbank:WP_115368724.1;Name=WP_115368724.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017389755.1;locus_tag=LP088_RS01610;product=valine--tRNA ligase;protein_id=WP_115368724.1;transl_table=11 NZ_CP087814.1 RefSeq gene 308806 310437 . + . ID=gene-LP088_RS01615;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=LP088_RS01615;old_locus_tag=LP088_01590 NZ_CP087814.1 Protein Homology CDS 308806 310437 . + 0 ID=cds-WP_078274864.1;Parent=gene-LP088_RS01615;Dbxref=Genbank:WP_078274864.1;Name=WP_078274864.1;Ontology_term=GO:0006497,GO:0042158,GO:0016410,GO:0016020;gbkey=CDS;gene=lnt;go_component=membrane|0016020||IEA;go_function=N-acyltransferase activity|0016410||IEA;go_process=protein lipidation|0006497||IEA,lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514585.1;locus_tag=LP088_RS01615;product=apolipoprotein N-acyltransferase;protein_id=WP_078274864.1;transl_table=11 NZ_CP087814.1 RefSeq gene 310635 311123 . + . ID=gene-LP088_RS01620;Name=LP088_RS01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01620;old_locus_tag=LP088_01595 NZ_CP087814.1 GeneMarkS-2+ CDS 310635 311123 . + 0 ID=cds-WP_112742679.1;Parent=gene-LP088_RS01620;Dbxref=Genbank:WP_112742679.1;Name=WP_112742679.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS01620;product=hypothetical protein;protein_id=WP_112742679.1;transl_table=11 NZ_CP087814.1 RefSeq gene 311603 313150 . + . ID=gene-LP088_RS01625;Name=LP088_RS01625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01625;old_locus_tag=LP088_01600 NZ_CP087814.1 Protein Homology CDS 311603 313150 . + 0 ID=cds-WP_078274856.1;Parent=gene-LP088_RS01625;Dbxref=Genbank:WP_078274856.1;Name=WP_078274856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520241.1;locus_tag=LP088_RS01625;product=TolC family protein;protein_id=WP_078274856.1;transl_table=11 NZ_CP087814.1 RefSeq gene 313368 315581 . + . ID=gene-LP088_RS01630;Name=LP088_RS01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01630;old_locus_tag=LP088_01605 NZ_CP087814.1 Protein Homology CDS 313368 315581 . + 0 ID=cds-WP_264676078.1;Parent=gene-LP088_RS01630;Dbxref=Genbank:WP_264676078.1;Name=WP_264676078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011960035.1;locus_tag=LP088_RS01630;product=peptidase domain-containing ABC transporter;protein_id=WP_264676078.1;transl_table=11 NZ_CP087814.1 RefSeq gene 315593 316759 . + . ID=gene-LP088_RS01635;Name=LP088_RS01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01635;old_locus_tag=LP088_01610 NZ_CP087814.1 Protein Homology CDS 315593 316759 . + 0 ID=cds-WP_115368719.1;Parent=gene-LP088_RS01635;Dbxref=Genbank:WP_115368719.1;Name=WP_115368719.1;Ontology_term=GO:0030253;gbkey=CDS;go_process=protein secretion by the type I secretion system|0030253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011960036.1;locus_tag=LP088_RS01635;product=HlyD family type I secretion periplasmic adaptor subunit;protein_id=WP_115368719.1;transl_table=11 NZ_CP087814.1 RefSeq gene 316875 317576 . - . ID=gene-LP088_RS01640;Name=LP088_RS01640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01640;old_locus_tag=LP088_01615 NZ_CP087814.1 Protein Homology CDS 316875 317576 . - 0 ID=cds-WP_228157715.1;Parent=gene-LP088_RS01640;Dbxref=Genbank:WP_228157715.1;Name=WP_228157715.1;Ontology_term=GO:0005525;gbkey=CDS;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005155891.1;locus_tag=LP088_RS01640;product=50S ribosome-binding GTPase;protein_id=WP_228157715.1;transl_table=11 NZ_CP087814.1 RefSeq gene 317573 318565 . - . ID=gene-LP088_RS01645;Name=LP088_RS01645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01645;old_locus_tag=LP088_01620 NZ_CP087814.1 Protein Homology CDS 317573 318565 . - 0 ID=cds-WP_078274852.1;Parent=gene-LP088_RS01645;Dbxref=Genbank:WP_078274852.1;Name=WP_078274852.1;Ontology_term=GO:0005525;gbkey=CDS;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005155899.1;locus_tag=LP088_RS01645;product=50S ribosome-binding GTPase;protein_id=WP_078274852.1;transl_table=11 NZ_CP087814.1 RefSeq gene 319162 319998 . - . ID=gene-LP088_RS01650;Name=LP088_RS01650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01650;old_locus_tag=LP088_01625 NZ_CP087814.1 Protein Homology CDS 319162 319998 . - 0 ID=cds-WP_078274863.1;Parent=gene-LP088_RS01650;Dbxref=Genbank:WP_078274863.1;Name=WP_078274863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005250301.1;locus_tag=LP088_RS01650;product=exodeoxyribonuclease III;protein_id=WP_078274863.1;transl_table=11 NZ_CP087814.1 RefSeq gene 320413 322233 . - . ID=gene-LP088_RS01655;Name=LP088_RS01655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01655;old_locus_tag=LP088_01630 NZ_CP087814.1 Protein Homology CDS 320413 322233 . - 0 ID=cds-WP_078274849.1;Parent=gene-LP088_RS01655;Dbxref=Genbank:WP_078274849.1;Name=WP_078274849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003656236.1;locus_tag=LP088_RS01655;product=acyl-CoA dehydrogenase C-terminal domain-containing protein;protein_id=WP_078274849.1;transl_table=11 NZ_CP087814.1 RefSeq gene 322386 323177 . - . ID=gene-LP088_RS01660;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=LP088_RS01660;old_locus_tag=LP088_01635 NZ_CP087814.1 Protein Homology CDS 322386 323177 . - 0 ID=cds-WP_078274848.1;Parent=gene-LP088_RS01660;Dbxref=Genbank:WP_078274848.1;Name=WP_078274848.1;Ontology_term=GO:0019632,GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003670925.1;locus_tag=LP088_RS01660;product=shikimate dehydrogenase;protein_id=WP_078274848.1;transl_table=11 NZ_CP087814.1 RefSeq gene 323448 324044 . + . ID=gene-LP088_RS01665;Name=LP088_RS01665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01665;old_locus_tag=LP088_01640 NZ_CP087814.1 GeneMarkS-2+ CDS 323448 324044 . + 0 ID=cds-WP_078274847.1;Parent=gene-LP088_RS01665;Dbxref=Genbank:WP_078274847.1;Name=WP_078274847.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS01665;product=hypothetical protein;protein_id=WP_078274847.1;transl_table=11 NZ_CP087814.1 RefSeq gene 324254 324715 . - . ID=gene-LP088_RS01670;Name=LP088_RS01670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01670;old_locus_tag=LP088_01645 NZ_CP087814.1 Protein Homology CDS 324254 324715 . - 0 ID=cds-WP_158079690.1;Parent=gene-LP088_RS01670;Dbxref=Genbank:WP_158079690.1;Name=WP_158079690.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022426.2;locus_tag=LP088_RS01670;product=DUF2799 domain-containing protein;protein_id=WP_158079690.1;transl_table=11 NZ_CP087814.1 RefSeq gene 324816 325289 . - . ID=gene-LP088_RS01675;Name=LP088_RS01675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01675;old_locus_tag=LP088_01650 NZ_CP087814.1 Protein Homology CDS 324816 325289 . - 0 ID=cds-WP_078274845.1;Parent=gene-LP088_RS01675;Dbxref=Genbank:WP_078274845.1;Name=WP_078274845.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021390.2;locus_tag=LP088_RS01675;product=MliC family protein;protein_id=WP_078274845.1;transl_table=11 NZ_CP087814.1 RefSeq gene 325565 325702 . + . ID=gene-LP088_RS01680;Name=LP088_RS01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01680;old_locus_tag=LP088_01655 NZ_CP087814.1 GeneMarkS-2+ CDS 325565 325702 . + 0 ID=cds-WP_158079689.1;Parent=gene-LP088_RS01680;Dbxref=Genbank:WP_158079689.1;Name=WP_158079689.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS01680;product=hypothetical protein;protein_id=WP_158079689.1;transl_table=11 NZ_CP087814.1 RefSeq gene 325699 326031 . - . ID=gene-LP088_RS01685;Name=LP088_RS01685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01685;old_locus_tag=LP088_01660 NZ_CP087814.1 GeneMarkS-2+ CDS 325699 326031 . - 0 ID=cds-WP_078274844.1;Parent=gene-LP088_RS01685;Dbxref=Genbank:WP_078274844.1;Name=WP_078274844.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS01685;product=hypothetical protein;protein_id=WP_078274844.1;transl_table=11 NZ_CP087814.1 RefSeq gene 326181 327410 . - . ID=gene-LP088_RS01690;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=LP088_RS01690;old_locus_tag=LP088_01665 NZ_CP087814.1 Protein Homology CDS 326181 327410 . - 0 ID=cds-WP_078274843.1;Parent=gene-LP088_RS01690;Dbxref=Genbank:WP_078274843.1;Name=WP_078274843.1;Ontology_term=GO:0006814,GO:1902600,GO:0015385;gbkey=CDS;gene=nhaA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007394307.1;locus_tag=LP088_RS01690;product=Na+/H+ antiporter NhaA;protein_id=WP_078274843.1;transl_table=11 NZ_CP087814.1 RefSeq gene 328813 331938 . + . ID=gene-LP088_RS01695;Name=LP088_RS01695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01695;old_locus_tag=LP088_01670 NZ_CP087814.1 Protein Homology CDS 328813 331938 . + 0 ID=cds-WP_162860444.1;Parent=gene-LP088_RS01695;Dbxref=Genbank:WP_162860444.1;Name=WP_162860444.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF012311.2;locus_tag=LP088_RS01695;product=S8 family serine peptidase;protein_id=WP_162860444.1;transl_table=11 NZ_CP087814.1 RefSeq gene 332073 332603 . - . ID=gene-LP088_RS01700;Name=LP088_RS01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01700;old_locus_tag=LP088_01675 NZ_CP087814.1 Protein Homology CDS 332073 332603 . - 0 ID=cds-WP_112742677.1;Parent=gene-LP088_RS01700;Dbxref=Genbank:WP_112742677.1;Name=WP_112742677.1;Ontology_term=GO:0009058,GO:0016742;gbkey=CDS;go_function=hydroxymethyl-%2C formyl- and related transferase activity|0016742||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003671037.1;locus_tag=LP088_RS01700;product=formyltransferase family protein;protein_id=WP_112742677.1;transl_table=11 NZ_CP087814.1 RefSeq gene 332593 333753 . - . ID=gene-LP088_RS01705;Name=LP088_RS01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01705;old_locus_tag=LP088_01680 NZ_CP087814.1 Protein Homology CDS 332593 333753 . - 0 ID=cds-WP_078274841.1;Parent=gene-LP088_RS01705;Dbxref=Genbank:WP_078274841.1;Name=WP_078274841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003671038.1;locus_tag=LP088_RS01705;product=ABC transporter ATP-binding protein;protein_id=WP_078274841.1;transl_table=11 NZ_CP087814.1 RefSeq gene 333750 333917 . - . ID=gene-LP088_RS01710;Name=LP088_RS01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01710;old_locus_tag=LP088_01685 NZ_CP087814.1 Protein Homology CDS 333750 333917 . - 0 ID=cds-WP_162860443.1;Parent=gene-LP088_RS01710;Dbxref=Genbank:WP_162860443.1;Name=WP_162860443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005259493.1;locus_tag=LP088_RS01710;product=hypothetical protein;protein_id=WP_162860443.1;transl_table=11 NZ_CP087814.1 RefSeq gene 334239 334787 . - . ID=gene-LP088_RS01715;Name=LP088_RS01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01715;old_locus_tag=LP088_01690 NZ_CP087814.1 GeneMarkS-2+ CDS 334239 334787 . - 0 ID=cds-WP_078274839.1;Parent=gene-LP088_RS01715;Dbxref=Genbank:WP_078274839.1;Name=WP_078274839.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS01715;product=hypothetical protein;protein_id=WP_078274839.1;transl_table=11 NZ_CP087814.1 RefSeq gene 334796 334993 . - . ID=gene-LP088_RS01720;Name=LP088_RS01720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01720;old_locus_tag=LP088_01695 NZ_CP087814.1 GeneMarkS-2+ CDS 334796 334993 . - 0 ID=cds-WP_078274838.1;Parent=gene-LP088_RS01720;Dbxref=Genbank:WP_078274838.1;Name=WP_078274838.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS01720;product=hypothetical protein;protein_id=WP_078274838.1;transl_table=11 NZ_CP087814.1 RefSeq gene 334984 335589 . - . ID=gene-LP088_RS01725;Name=LP088_RS01725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01725;old_locus_tag=LP088_01700 NZ_CP087814.1 Protein Homology CDS 334984 335589 . - 0 ID=cds-WP_078274837.1;Parent=gene-LP088_RS01725;Dbxref=Genbank:WP_078274837.1;Name=WP_078274837.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021220.2;locus_tag=LP088_RS01725;product=phage tail protein;protein_id=WP_078274837.1;transl_table=11 NZ_CP087814.1 RefSeq gene 335582 336409 . - . ID=gene-LP088_RS01730;Name=LP088_RS01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01730;old_locus_tag=LP088_01705 NZ_CP087814.1 Protein Homology CDS 335582 336409 . - 0 ID=cds-WP_078274836.1;Parent=gene-LP088_RS01730;Dbxref=Genbank:WP_078274836.1;Name=WP_078274836.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016736.2;locus_tag=LP088_RS01730;product=baseplate J/gp47 family protein;protein_id=WP_078274836.1;transl_table=11 NZ_CP087814.1 RefSeq gene 336429 336812 . - . ID=gene-LP088_RS01735;Name=LP088_RS01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01735;old_locus_tag=LP088_01710 NZ_CP087814.1 Protein Homology CDS 336429 336812 . - 0 ID=cds-WP_078274835.1;Parent=gene-LP088_RS01735;Dbxref=Genbank:WP_078274835.1;Name=WP_078274835.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016829.2;locus_tag=LP088_RS01735;product=GPW/gp25 family protein;protein_id=WP_078274835.1;transl_table=11 NZ_CP087814.1 RefSeq gene 336874 337443 . - . ID=gene-LP088_RS01740;Name=LP088_RS01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01740;old_locus_tag=LP088_01715 NZ_CP087814.1 Protein Homology CDS 336874 337443 . - 0 ID=cds-WP_112742676.1;Parent=gene-LP088_RS01740;Dbxref=Genbank:WP_112742676.1;Name=WP_112742676.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: protein motif:HMM:TIGR01644.1;locus_tag=LP088_RS01740;product=phage baseplate assembly protein V;protein_id=WP_112742676.1;transl_table=11 NZ_CP087814.1 RefSeq gene 337459 337689 . - . ID=gene-LP088_RS01745;Name=LP088_RS01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01745;old_locus_tag=LP088_01720 NZ_CP087814.1 Protein Homology CDS 337459 337689 . - 0 ID=cds-WP_112742675.1;Parent=gene-LP088_RS01745;Dbxref=Genbank:WP_112742675.1;Name=WP_112742675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019672316.1;locus_tag=LP088_RS01745;product=tail protein X;protein_id=WP_112742675.1;transl_table=11 NZ_CP087814.1 RefSeq gene 337692 339368 . - . ID=gene-LP088_RS01750;Name=LP088_RS01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01750;old_locus_tag=LP088_01725 NZ_CP087814.1 Protein Homology CDS 337692 339368 . - 0 ID=cds-WP_264676079.1;Parent=gene-LP088_RS01750;Dbxref=Genbank:WP_264676079.1;Name=WP_264676079.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: protein motif:HMM:TIGR01760.1;locus_tag=LP088_RS01750;product=phage tail tape measure protein;protein_id=WP_264676079.1;transl_table=11 NZ_CP087814.1 RefSeq gene 339361 339516 . - . ID=gene-LP088_RS01755;Name=LP088_RS01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01755;old_locus_tag=LP088_01730 NZ_CP087814.1 GeneMarkS-2+ CDS 339361 339516 . - 0 ID=cds-WP_078274829.1;Parent=gene-LP088_RS01755;Dbxref=Genbank:WP_078274829.1;Name=WP_078274829.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS01755;product=GpE family phage tail protein;protein_id=WP_078274829.1;transl_table=11 NZ_CP087814.1 RefSeq gene 339479 339793 . - . ID=gene-LP088_RS01760;Name=LP088_RS01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01760;old_locus_tag=LP088_01735 NZ_CP087814.1 Protein Homology CDS 339479 339793 . - 0 ID=cds-WP_078274828.1;Parent=gene-LP088_RS01760;Dbxref=Genbank:WP_078274828.1;Name=WP_078274828.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021614.2;locus_tag=LP088_RS01760;product=phage tail assembly protein;protein_id=WP_078274828.1;transl_table=11 NZ_CP087814.1 RefSeq gene 339876 340394 . - . ID=gene-LP088_RS01765;Name=LP088_RS01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01765;old_locus_tag=LP088_01740 NZ_CP087814.1 Protein Homology CDS 339876 340394 . - 0 ID=cds-WP_078274827.1;Parent=gene-LP088_RS01765;Dbxref=Genbank:WP_078274827.1;Name=WP_078274827.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000034292.1;locus_tag=LP088_RS01765;product=phage major tail tube protein;protein_id=WP_078274827.1;transl_table=11 NZ_CP087814.1 RefSeq gene 340395 340688 . - . ID=gene-LP088_RS01770;Name=LP088_RS01770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01770;old_locus_tag=LP088_01745 NZ_CP087814.1 GeneMarkS-2+ CDS 340395 340688 . - 0 ID=cds-WP_112742672.1;Parent=gene-LP088_RS01770;Dbxref=Genbank:WP_112742672.1;Name=WP_112742672.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS01770;product=hypothetical protein;protein_id=WP_112742672.1;transl_table=11 NZ_CP087814.1 RefSeq gene 340719 341075 . - . ID=gene-LP088_RS01775;Name=LP088_RS01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01775;old_locus_tag=LP088_01750 NZ_CP087814.1 Protein Homology CDS 340719 341075 . - 0 ID=cds-WP_112742671.1;Parent=gene-LP088_RS01775;Dbxref=Genbank:WP_112742671.1;Name=WP_112742671.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021473.2;locus_tag=LP088_RS01775;product=DUF2190 family protein;protein_id=WP_112742671.1;transl_table=11 NZ_CP087814.1 RefSeq gene 341098 342249 . - . ID=gene-LP088_RS01780;Name=LP088_RS01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01780;old_locus_tag=LP088_01755 NZ_CP087814.1 GeneMarkS-2+ CDS 341098 342249 . - 0 ID=cds-WP_112742670.1;Parent=gene-LP088_RS01780;Dbxref=Genbank:WP_112742670.1;Name=WP_112742670.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS01780;product=hypothetical protein;protein_id=WP_112742670.1;transl_table=11 NZ_CP087814.1 RefSeq gene 342450 342974 . + . ID=gene-LP088_RS01785;Name=LP088_RS01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01785;old_locus_tag=LP088_01760 NZ_CP087814.1 Protein Homology CDS 342450 342974 . + 0 ID=cds-WP_112742669.1;Parent=gene-LP088_RS01785;Dbxref=Genbank:WP_112742669.1;Name=WP_112742669.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024671.2;locus_tag=LP088_RS01785;product=DUF4065 domain-containing protein;protein_id=WP_112742669.1;transl_table=11 NZ_CP087814.1 RefSeq gene 342934 343362 . + . ID=gene-LP088_RS01790;Name=LP088_RS01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01790;old_locus_tag=LP088_01765 NZ_CP087814.1 GeneMarkS-2+ CDS 342934 343362 . + 0 ID=cds-WP_112742668.1;Parent=gene-LP088_RS01790;Dbxref=Genbank:WP_112742668.1;Name=WP_112742668.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS01790;product=hypothetical protein;protein_id=WP_112742668.1;transl_table=11 NZ_CP087814.1 RefSeq gene 343534 343962 . - . ID=gene-LP088_RS01795;Name=LP088_RS01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01795;old_locus_tag=LP088_01770 NZ_CP087814.1 Protein Homology CDS 343534 343962 . - 0 ID=cds-WP_112742667.1;Parent=gene-LP088_RS01795;Dbxref=Genbank:WP_112742667.1;Name=WP_112742667.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016927.2;locus_tag=LP088_RS01795;product=phage virion morphogenesis protein;protein_id=WP_112742667.1;transl_table=11 NZ_CP087814.1 RefSeq gene 344118 344660 . - . ID=gene-LP088_RS01800;Name=LP088_RS01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01800;old_locus_tag=LP088_01775 NZ_CP087814.1 GeneMarkS-2+ CDS 344118 344660 . - 0 ID=cds-WP_162860442.1;Parent=gene-LP088_RS01800;Dbxref=Genbank:WP_162860442.1;Name=WP_162860442.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS01800;product=hypothetical protein;protein_id=WP_162860442.1;transl_table=11 NZ_CP087814.1 RefSeq gene 344676 344897 . + . ID=gene-LP088_RS01805;Name=LP088_RS01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01805;old_locus_tag=LP088_01780 NZ_CP087814.1 GeneMarkS-2+ CDS 344676 344897 . + 0 ID=cds-WP_112742665.1;Parent=gene-LP088_RS01805;Dbxref=Genbank:WP_112742665.1;Name=WP_112742665.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS01805;product=hypothetical protein;protein_id=WP_112742665.1;transl_table=11 NZ_CP087814.1 RefSeq gene 344921 345544 . + . ID=gene-LP088_RS01810;Name=LP088_RS01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01810;old_locus_tag=LP088_01785 NZ_CP087814.1 Protein Homology CDS 344921 345544 . + 0 ID=cds-WP_078274821.1;Parent=gene-LP088_RS01810;Dbxref=Genbank:WP_078274821.1;Name=WP_078274821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005153705.1;locus_tag=LP088_RS01810;product=DUF3164 family protein;protein_id=WP_078274821.1;transl_table=11 NZ_CP087814.1 RefSeq gene 345624 345896 . + . ID=gene-LP088_RS01815;Name=LP088_RS01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01815;old_locus_tag=LP088_01790 NZ_CP087814.1 Protein Homology CDS 345624 345896 . + 0 ID=cds-WP_078274820.1;Parent=gene-LP088_RS01815;Dbxref=Genbank:WP_078274820.1;Name=WP_078274820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199383.1;locus_tag=LP088_RS01815;product=HU family DNA-binding protein;protein_id=WP_078274820.1;transl_table=11 NZ_CP087814.1 RefSeq gene 345979 346476 . + . ID=gene-LP088_RS01820;Name=LP088_RS01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01820;old_locus_tag=LP088_01795 NZ_CP087814.1 Protein Homology CDS 345979 346476 . + 0 ID=cds-WP_078274819.1;Parent=gene-LP088_RS01820;Dbxref=Genbank:WP_078274819.1;Name=WP_078274819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019672276.1;locus_tag=LP088_RS01820;product=regulatory protein GemA;protein_id=WP_078274819.1;transl_table=11 NZ_CP087814.1 RefSeq gene 346593 346970 . + . ID=gene-LP088_RS01825;Name=LP088_RS01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01825;old_locus_tag=LP088_01800 NZ_CP087814.1 Protein Homology CDS 346593 346970 . + 0 ID=cds-WP_078274818.1;Parent=gene-LP088_RS01825;Dbxref=Genbank:WP_078274818.1;Name=WP_078274818.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020345.2;locus_tag=LP088_RS01825;product=hypothetical protein;protein_id=WP_078274818.1;transl_table=11 NZ_CP087814.1 RefSeq gene 347165 348445 . - . ID=gene-LP088_RS01830;Name=LP088_RS01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01830;old_locus_tag=LP088_01805 NZ_CP087814.1 Protein Homology CDS 347165 348445 . - 0 ID=cds-WP_112742664.1;Parent=gene-LP088_RS01830;Dbxref=Genbank:WP_112742664.1;Name=WP_112742664.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012593.2;locus_tag=LP088_RS01830;product=dicarboxylate/amino acid:cation symporter;protein_id=WP_112742664.1;transl_table=11 NZ_CP087814.1 RefSeq gene 348559 349308 . + . ID=gene-LP088_RS01835;Name=LP088_RS01835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01835;old_locus_tag=LP088_01810 NZ_CP087814.1 Protein Homology CDS 348559 349308 . + 0 ID=cds-WP_078274817.1;Parent=gene-LP088_RS01835;Dbxref=Genbank:WP_078274817.1;Name=WP_078274817.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009767244.1;locus_tag=LP088_RS01835;product=TSUP family transporter;protein_id=WP_078274817.1;transl_table=11 NZ_CP087814.1 RefSeq gene 349368 350063 . - . ID=gene-LP088_RS01840;Name=LP088_RS01840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01840;old_locus_tag=LP088_01815 NZ_CP087814.1 GeneMarkS-2+ CDS 349368 350063 . - 0 ID=cds-WP_264676080.1;Parent=gene-LP088_RS01840;Dbxref=Genbank:WP_264676080.1;Name=WP_264676080.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS01840;product=hypothetical protein;protein_id=WP_264676080.1;transl_table=11 NZ_CP087814.1 RefSeq gene 350066 350278 . - . ID=gene-LP088_RS01845;Name=LP088_RS01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01845;old_locus_tag=LP088_01820 NZ_CP087814.1 GeneMarkS-2+ CDS 350066 350278 . - 0 ID=cds-WP_078274815.1;Parent=gene-LP088_RS01845;Dbxref=Genbank:WP_078274815.1;Name=WP_078274815.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS01845;product=hypothetical protein;protein_id=WP_078274815.1;transl_table=11 NZ_CP087814.1 RefSeq gene 350495 350770 . - . ID=gene-LP088_RS01850;Name=LP088_RS01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01850;old_locus_tag=LP088_01825 NZ_CP087814.1 GeneMarkS-2+ CDS 350495 350770 . - 0 ID=cds-WP_264676081.1;Parent=gene-LP088_RS01850;Dbxref=Genbank:WP_264676081.1;Name=WP_264676081.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS01850;product=hypothetical protein;protein_id=WP_264676081.1;transl_table=11 NZ_CP087814.1 RefSeq gene 350878 352098 . + . ID=gene-LP088_RS01855;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=LP088_RS01855;old_locus_tag=LP088_01830 NZ_CP087814.1 Protein Homology CDS 350878 352098 . + 0 ID=cds-WP_264676082.1;Parent=gene-LP088_RS01855;Dbxref=Genbank:WP_264676082.1;Name=WP_264676082.1;Ontology_term=GO:0015937,GO:0015939,GO:0004632,GO:0004633;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate metabolic process|0015939||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003660345.1;locus_tag=LP088_RS01855;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_264676082.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 352130 352691 . - . ID=gene-LP088_RS01860;Name=LP088_RS01860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS01860;old_locus_tag=LP088_01835;pseudo=true NZ_CP087814.1 Protein Homology CDS 352130 352691 . - 0 ID=cds-LP088_RS01860;Parent=gene-LP088_RS01860;Note=frameshifted;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011959554.1;locus_tag=LP088_RS01860;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_CP087814.1 RefSeq gene 352789 353547 . + . ID=gene-LP088_RS01865;Name=LP088_RS01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01865;old_locus_tag=LP088_01840 NZ_CP087814.1 Protein Homology CDS 352789 353547 . + 0 ID=cds-WP_078275070.1;Parent=gene-LP088_RS01865;Dbxref=Genbank:WP_078275070.1;Name=WP_078275070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201646.1;locus_tag=LP088_RS01865;product=sulfite exporter TauE/SafE family protein;protein_id=WP_078275070.1;transl_table=11 NZ_CP087814.1 RefSeq gene 353573 353770 . + . ID=gene-LP088_RS01870;Name=LP088_RS01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01870;old_locus_tag=LP088_01845 NZ_CP087814.1 GeneMarkS-2+ CDS 353573 353770 . + 0 ID=cds-WP_228157714.1;Parent=gene-LP088_RS01870;Dbxref=Genbank:WP_228157714.1;Name=WP_228157714.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS01870;product=hypothetical protein;protein_id=WP_228157714.1;transl_table=11 NZ_CP087814.1 RefSeq gene 354097 354393 . + . ID=gene-LP088_RS01875;Name=LP088_RS01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01875;old_locus_tag=LP088_01850 NZ_CP087814.1 GeneMarkS-2+ CDS 354097 354393 . + 0 ID=cds-WP_078275071.1;Parent=gene-LP088_RS01875;Dbxref=Genbank:WP_078275071.1;Name=WP_078275071.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS01875;product=hypothetical protein;protein_id=WP_078275071.1;transl_table=11 NZ_CP087814.1 RefSeq gene 354365 354541 . + . ID=gene-LP088_RS01880;Name=LP088_RS01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01880;old_locus_tag=LP088_01855 NZ_CP087814.1 GeneMarkS-2+ CDS 354365 354541 . + 0 ID=cds-WP_158079709.1;Parent=gene-LP088_RS01880;Dbxref=Genbank:WP_158079709.1;Name=WP_158079709.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS01880;product=barstar family protein;protein_id=WP_158079709.1;transl_table=11 NZ_CP087814.1 RefSeq gene 354579 356165 . - . ID=gene-LP088_RS01885;Name=rtcR;gbkey=Gene;gene=rtcR;gene_biotype=protein_coding;locus_tag=LP088_RS01885;old_locus_tag=LP088_01860 NZ_CP087814.1 Protein Homology CDS 354579 356165 . - 0 ID=cds-WP_078275072.1;Parent=gene-LP088_RS01885;Dbxref=Genbank:WP_078275072.1;Name=WP_078275072.1;Ontology_term=GO:0006355,GO:0003700,GO:0005524,GO:0008134;gbkey=CDS;gene=rtcR;go_function=DNA-binding transcription factor activity|0003700||IEA,ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001232948.1;locus_tag=LP088_RS01885;product=RNA repair transcriptional activator RtcR;protein_id=WP_078275072.1;transl_table=11 NZ_CP087814.1 RefSeq gene 356168 356326 . - . ID=gene-LP088_RS01890;Name=LP088_RS01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01890;old_locus_tag=LP088_01865 NZ_CP087814.1 GeneMarkS-2+ CDS 356168 356326 . - 0 ID=cds-WP_158079710.1;Parent=gene-LP088_RS01890;Dbxref=Genbank:WP_158079710.1;Name=WP_158079710.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS01890;product=hypothetical protein;protein_id=WP_158079710.1;transl_table=11 NZ_CP087814.1 RefSeq gene 356787 358367 . + . ID=gene-LP088_RS01895;Name=LP088_RS01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01895;old_locus_tag=LP088_01870 NZ_CP087814.1 GeneMarkS-2+ CDS 356787 358367 . + 0 ID=cds-WP_078275073.1;Parent=gene-LP088_RS01895;Dbxref=Genbank:WP_078275073.1;Name=WP_078275073.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS01895;product=hypothetical protein;protein_id=WP_078275073.1;transl_table=11 NZ_CP087814.1 RefSeq gene 358495 359124 . - . ID=gene-LP088_RS01900;Name=LP088_RS01900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01900;old_locus_tag=LP088_01875 NZ_CP087814.1 GeneMarkS-2+ CDS 358495 359124 . - 0 ID=cds-WP_078275074.1;Parent=gene-LP088_RS01900;Dbxref=Genbank:WP_078275074.1;Name=WP_078275074.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS01900;product=hypothetical protein;protein_id=WP_078275074.1;transl_table=11 NZ_CP087814.1 RefSeq gene 359121 359831 . - . ID=gene-LP088_RS01905;Name=LP088_RS01905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01905;old_locus_tag=LP088_01880 NZ_CP087814.1 GeneMarkS-2+ CDS 359121 359831 . - 0 ID=cds-WP_112742660.1;Parent=gene-LP088_RS01905;Dbxref=Genbank:WP_112742660.1;Name=WP_112742660.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS01905;product=hypothetical protein;protein_id=WP_112742660.1;transl_table=11 NZ_CP087814.1 RefSeq gene 359843 360190 . - . ID=gene-LP088_RS01910;Name=LP088_RS01910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01910;old_locus_tag=LP088_01885 NZ_CP087814.1 Protein Homology CDS 359843 360190 . - 0 ID=cds-WP_112742659.1;Parent=gene-LP088_RS01910;Dbxref=Genbank:WP_112742659.1;Name=WP_112742659.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020345.2;locus_tag=LP088_RS01910;product=hypothetical protein;protein_id=WP_112742659.1;transl_table=11 NZ_CP087814.1 RefSeq gene 360387 360659 . - . ID=gene-LP088_RS01915;Name=LP088_RS01915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01915;old_locus_tag=LP088_01890 NZ_CP087814.1 GeneMarkS-2+ CDS 360387 360659 . - 0 ID=cds-WP_112742658.1;Parent=gene-LP088_RS01915;Dbxref=Genbank:WP_112742658.1;Name=WP_112742658.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS01915;product=hypothetical protein;protein_id=WP_112742658.1;transl_table=11 NZ_CP087814.1 RefSeq gene 362031 362939 . + . ID=gene-LP088_RS01920;Name=LP088_RS01920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01920;old_locus_tag=LP088_01895 NZ_CP087814.1 GeneMarkS-2+ CDS 362031 362939 . + 0 ID=cds-WP_112742657.1;Parent=gene-LP088_RS01920;Dbxref=Genbank:WP_112742657.1;Name=WP_112742657.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS01920;product=hypothetical protein;protein_id=WP_112742657.1;transl_table=11 NZ_CP087814.1 RefSeq gene 363383 363823 . - . ID=gene-LP088_RS01925;Name=LP088_RS01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01925;old_locus_tag=LP088_01900 NZ_CP087814.1 Protein Homology CDS 363383 363823 . - 0 ID=cds-WP_264683020.1;Parent=gene-LP088_RS01925;Dbxref=Genbank:WP_264683020.1;Name=WP_264683020.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033563.0;locus_tag=LP088_RS01925;product=IS30 family transposase;protein_id=WP_264683020.1;transl_table=11 NZ_CP087814.1 RefSeq gene 363768 364160 . - . ID=gene-LP088_RS01930;Name=LP088_RS01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01930;old_locus_tag=LP088_01905 NZ_CP087814.1 Protein Homology CDS 363768 364160 . - 0 ID=cds-WP_264676730.1;Parent=gene-LP088_RS01930;Dbxref=Genbank:WP_264676730.1;Name=WP_264676730.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024954.2;locus_tag=LP088_RS01930;product=helix-turn-helix domain-containing protein;protein_id=WP_264676730.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 364323 365150 . + . ID=gene-LP088_RS01935;Name=LP088_RS01935;end_range=365150,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS01935;old_locus_tag=LP088_01910;partial=true;pseudo=true NZ_CP087814.1 Protein Homology CDS 364323 365150 . + 0 ID=cds-LP088_RS01935;Parent=gene-LP088_RS01935;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=365150,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_182073071.1;locus_tag=LP088_RS01935;partial=true;product=IS630 family transposase;pseudo=true;transl_table=11 NZ_CP087814.1 RefSeq gene 365228 365686 . + . ID=gene-LP088_RS01940;Name=LP088_RS01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01940;old_locus_tag=LP088_01915 NZ_CP087814.1 Protein Homology CDS 365228 365686 . + 0 ID=cds-WP_078275076.1;Parent=gene-LP088_RS01940;Dbxref=Genbank:WP_078275076.1;Name=WP_078275076.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024972.2;locus_tag=LP088_RS01940;product=hypothetical protein;protein_id=WP_078275076.1;transl_table=11 NZ_CP087814.1 RefSeq gene 365691 366287 . + . ID=gene-LP088_RS01945;Name=LP088_RS01945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01945;old_locus_tag=LP088_01920 NZ_CP087814.1 GeneMarkS-2+ CDS 365691 366287 . + 0 ID=cds-WP_264676085.1;Parent=gene-LP088_RS01945;Dbxref=Genbank:WP_264676085.1;Name=WP_264676085.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS01945;product=hypothetical protein;protein_id=WP_264676085.1;transl_table=11 NZ_CP087814.1 RefSeq gene 366870 367844 . + . ID=gene-LP088_RS01950;Name=LP088_RS01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01950;old_locus_tag=LP088_01925 NZ_CP087814.1 Protein Homology CDS 366870 367844 . + 0 ID=cds-WP_264676059.1-2;Parent=gene-LP088_RS01950;Dbxref=Genbank:WP_264676059.1;Name=WP_264676059.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002337518.1;locus_tag=LP088_RS01950;product=IS30 family transposase;protein_id=WP_264676059.1;transl_table=11 NZ_CP087814.1 RefSeq gene 367849 368706 . - . ID=gene-LP088_RS01955;Name=LP088_RS01955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01955;old_locus_tag=LP088_01930 NZ_CP087814.1 GeneMarkS-2+ CDS 367849 368706 . - 0 ID=cds-WP_208624052.1;Parent=gene-LP088_RS01955;Dbxref=Genbank:WP_208624052.1;Name=WP_208624052.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS01955;product=PAAR domain-containing protein;protein_id=WP_208624052.1;transl_table=11 NZ_CP087814.1 RefSeq gene 368697 371348 . - . ID=gene-LP088_RS01960;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=protein_coding;locus_tag=LP088_RS01960;old_locus_tag=LP088_01935 NZ_CP087814.1 Protein Homology CDS 368697 371348 . - 0 ID=cds-WP_078275279.1;Parent=gene-LP088_RS01960;Dbxref=Genbank:WP_078275279.1;Name=WP_078275279.1;Ontology_term=GO:0033103,GO:0016887,GO:0033104;gbkey=CDS;gene=tssH;go_component=type VI protein secretion system complex|0033104||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004861847.1;locus_tag=LP088_RS01960;product=type VI secretion system ATPase TssH;protein_id=WP_078275279.1;transl_table=11 NZ_CP087814.1 RefSeq gene 371498 372145 . - . ID=gene-LP088_RS01965;Name=LP088_RS01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01965;old_locus_tag=LP088_01940 NZ_CP087814.1 GeneMarkS-2+ CDS 371498 372145 . - 0 ID=cds-WP_264676086.1;Parent=gene-LP088_RS01965;Dbxref=Genbank:WP_264676086.1;Name=WP_264676086.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS01965;product=hypothetical protein;protein_id=WP_264676086.1;transl_table=11 NZ_CP087814.1 RefSeq gene 372227 372859 . - . ID=gene-LP088_RS01970;Name=LP088_RS01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01970;old_locus_tag=LP088_01945 NZ_CP087814.1 GeneMarkS-2+ CDS 372227 372859 . - 0 ID=cds-WP_112742653.1;Parent=gene-LP088_RS01970;Dbxref=Genbank:WP_112742653.1;Name=WP_112742653.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS01970;product=hypothetical protein;protein_id=WP_112742653.1;transl_table=11 NZ_CP087814.1 RefSeq gene 372924 373562 . - . ID=gene-LP088_RS01975;Name=LP088_RS01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01975;old_locus_tag=LP088_01950 NZ_CP087814.1 GeneMarkS-2+ CDS 372924 373562 . - 0 ID=cds-WP_112742652.1;Parent=gene-LP088_RS01975;Dbxref=Genbank:WP_112742652.1;Name=WP_112742652.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS01975;product=hypothetical protein;protein_id=WP_112742652.1;transl_table=11 NZ_CP087814.1 RefSeq gene 373626 374276 . - . ID=gene-LP088_RS01980;Name=LP088_RS01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01980;old_locus_tag=LP088_01955 NZ_CP087814.1 GeneMarkS-2+ CDS 373626 374276 . - 0 ID=cds-WP_078275402.1;Parent=gene-LP088_RS01980;Dbxref=Genbank:WP_078275402.1;Name=WP_078275402.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS01980;product=hypothetical protein;protein_id=WP_078275402.1;transl_table=11 NZ_CP087814.1 RefSeq gene 374276 376072 . - . ID=gene-LP088_RS01985;Name=LP088_RS01985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01985;old_locus_tag=LP088_01960 NZ_CP087814.1 GeneMarkS-2+ CDS 374276 376072 . - 0 ID=cds-WP_112742651.1;Parent=gene-LP088_RS01985;Dbxref=Genbank:WP_112742651.1;Name=WP_112742651.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS01985;product=hypothetical protein;protein_id=WP_112742651.1;transl_table=11 NZ_CP087814.1 RefSeq gene 376082 376288 . - . ID=gene-LP088_RS01990;Name=LP088_RS01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01990;old_locus_tag=LP088_01965 NZ_CP087814.1 GeneMarkS-2+ CDS 376082 376288 . - 0 ID=cds-WP_162860440.1;Parent=gene-LP088_RS01990;Dbxref=Genbank:WP_162860440.1;Name=WP_162860440.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS01990;product=hypothetical protein;protein_id=WP_162860440.1;transl_table=11 NZ_CP087814.1 RefSeq gene 376756 377517 . - . ID=gene-LP088_RS01995;Name=LP088_RS01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS01995;old_locus_tag=LP088_01970 NZ_CP087814.1 Protein Homology CDS 376756 377517 . - 0 ID=cds-WP_208624034.1;Parent=gene-LP088_RS01995;Dbxref=Genbank:WP_208624034.1;Name=WP_208624034.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF012870.2;locus_tag=LP088_RS01995;product=DDE-type integrase/transposase/recombinase;protein_id=WP_208624034.1;transl_table=11 NZ_CP087814.1 RefSeq gene 377697 378155 . + . ID=gene-LP088_RS02000;Name=LP088_RS02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02000;old_locus_tag=LP088_01975 NZ_CP087814.1 Protein Homology CDS 377697 378155 . + 0 ID=cds-WP_158079646.1;Parent=gene-LP088_RS02000;Dbxref=Genbank:WP_158079646.1;Name=WP_158079646.1;Ontology_term=GO:0003676,GO:0004518;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: protein motif:HMM:NF009150.0;locus_tag=LP088_RS02000;product=YraN family protein;protein_id=WP_158079646.1;transl_table=11 NZ_CP087814.1 RefSeq gene 378184 379179 . + . ID=gene-LP088_RS02005;Name=LP088_RS02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02005;old_locus_tag=LP088_01980 NZ_CP087814.1 Protein Homology CDS 378184 379179 . + 0 ID=cds-WP_078274063.1;Parent=gene-LP088_RS02005;Dbxref=Genbank:WP_078274063.1;Name=WP_078274063.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016836.2;locus_tag=LP088_RS02005;product=BON domain-containing protein;protein_id=WP_078274063.1;transl_table=11 NZ_CP087814.1 RefSeq gene 379507 379749 . + . ID=gene-LP088_RS02010;Name=LP088_RS02010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02010;old_locus_tag=LP088_01985 NZ_CP087814.1 Protein Homology CDS 379507 379749 . + 0 ID=cds-WP_112742619.1;Parent=gene-LP088_RS02010;Dbxref=Genbank:WP_112742619.1;Name=WP_112742619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514505.1;locus_tag=LP088_RS02010;product=BolA/IbaG family iron-sulfur metabolism protein;protein_id=WP_112742619.1;transl_table=11 NZ_CP087814.1 RefSeq gene 379752 381014 . + . ID=gene-LP088_RS02015;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=LP088_RS02015;old_locus_tag=LP088_01990 NZ_CP087814.1 Protein Homology CDS 379752 381014 . + 0 ID=cds-WP_112742618.1;Parent=gene-LP088_RS02015;Dbxref=Genbank:WP_112742618.1;Name=WP_112742618.1;Ontology_term=GO:0009252,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004669797.1;locus_tag=LP088_RS02015;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_112742618.1;transl_table=11 NZ_CP087814.1 RefSeq gene 381209 382183 . - . ID=gene-LP088_RS02020;Name=LP088_RS02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02020;old_locus_tag=LP088_01995 NZ_CP087814.1 Protein Homology CDS 381209 382183 . - 0 ID=cds-WP_112742617.1;Parent=gene-LP088_RS02020;Dbxref=Genbank:WP_112742617.1;Name=WP_112742617.1;Ontology_term=GO:0008033,GO:0017150,GO:0050660;gbkey=CDS;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444416.1;locus_tag=LP088_RS02020;product=tRNA-dihydrouridine synthase;protein_id=WP_112742617.1;transl_table=11 NZ_CP087814.1 RefSeq gene 382180 382758 . - . ID=gene-LP088_RS02025;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=LP088_RS02025;old_locus_tag=LP088_02000 NZ_CP087814.1 Protein Homology CDS 382180 382758 . - 0 ID=cds-WP_228157857.1;Parent=gene-LP088_RS02025;Dbxref=Genbank:WP_228157857.1;Name=WP_228157857.1;Ontology_term=GO:0006412,GO:0004045;gbkey=CDS;gene=pth;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003673379.1;locus_tag=LP088_RS02025;product=aminoacyl-tRNA hydrolase;protein_id=WP_228157857.1;transl_table=11 NZ_CP087814.1 RefSeq gene 382828 383442 . - . ID=gene-LP088_RS02030;Name=LP088_RS02030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02030;old_locus_tag=LP088_02005 NZ_CP087814.1 Protein Homology CDS 382828 383442 . - 0 ID=cds-WP_078274068.1;Parent=gene-LP088_RS02030;Dbxref=Genbank:WP_078274068.1;Name=WP_078274068.1;Ontology_term=GO:0006412,GO:0003735,GO:0008097;gbkey=CDS;go_function=structural constituent of ribosome|0003735||IEA,5S rRNA binding|0008097||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003658644.1;locus_tag=LP088_RS02030;product=50S ribosomal protein L25/general stress protein Ctc;protein_id=WP_078274068.1;transl_table=11 NZ_CP087814.1 RefSeq gene 383716 385224 . + . ID=gene-LP088_RS02035;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=LP088_RS02035;old_locus_tag=LP088_02010 NZ_CP087814.1 Protein Homology CDS 383716 385224 . + 0 ID=cds-WP_078274069.1;Parent=gene-LP088_RS02035;Dbxref=Genbank:WP_078274069.1;Name=WP_078274069.1;Ontology_term=GO:0015824,GO:0005298,GO:0016020;gbkey=CDS;gene=putP;go_component=membrane|0016020||IEA;go_function=proline:sodium symporter activity|0005298||IEA;go_process=proline transport|0015824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280684.1;locus_tag=LP088_RS02035;product=sodium/proline symporter PutP;protein_id=WP_078274069.1;transl_table=11 NZ_CP087814.1 RefSeq gene 385479 386189 . + . ID=gene-LP088_RS02040;Name=LP088_RS02040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02040;old_locus_tag=LP088_02015 NZ_CP087814.1 Protein Homology CDS 385479 386189 . + 0 ID=cds-WP_078274070.1;Parent=gene-LP088_RS02040;Dbxref=Genbank:WP_078274070.1;Name=WP_078274070.1;Ontology_term=GO:0042834;gbkey=CDS;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: protein motif:HMM:NF016895.2;locus_tag=LP088_RS02040;product=SPOR domain-containing protein;protein_id=WP_078274070.1;transl_table=11 NZ_CP087814.1 RefSeq gene 386251 386631 . - . ID=gene-LP088_RS02045;Name=LP088_RS02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02045;old_locus_tag=LP088_02020 NZ_CP087814.1 GeneMarkS-2+ CDS 386251 386631 . - 0 ID=cds-WP_078274071.1;Parent=gene-LP088_RS02045;Dbxref=Genbank:WP_078274071.1;Name=WP_078274071.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS02045;product=hypothetical protein;protein_id=WP_078274071.1;transl_table=11 NZ_CP087814.1 RefSeq gene 386736 388037 . - . ID=gene-LP088_RS02050;Name=LP088_RS02050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02050;old_locus_tag=LP088_02025 NZ_CP087814.1 Protein Homology CDS 386736 388037 . - 0 ID=cds-WP_078274072.1;Parent=gene-LP088_RS02050;Dbxref=Genbank:WP_078274072.1;Name=WP_078274072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003659152.1;locus_tag=LP088_RS02050;product=homoserine dehydrogenase;protein_id=WP_078274072.1;transl_table=11 NZ_CP087814.1 RefSeq gene 388273 389127 . - . ID=gene-LP088_RS02055;Name=LP088_RS02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02055;old_locus_tag=LP088_02030 NZ_CP087814.1 Protein Homology CDS 388273 389127 . - 0 ID=cds-WP_078274073.1;Parent=gene-LP088_RS02055;Dbxref=Genbank:WP_078274073.1;Name=WP_078274073.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024498.2;locus_tag=LP088_RS02055;product=DsbC family protein;protein_id=WP_078274073.1;transl_table=11 NZ_CP087814.1 RefSeq gene 389325 390239 . + . ID=gene-LP088_RS02060;Name=LP088_RS02060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02060;old_locus_tag=LP088_02035 NZ_CP087814.1 Protein Homology CDS 389325 390239 . + 0 ID=cds-WP_078274074.1;Parent=gene-LP088_RS02060;Dbxref=Genbank:WP_078274074.1;Name=WP_078274074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520290.1;locus_tag=LP088_RS02060;product=DUF808 domain-containing protein;protein_id=WP_078274074.1;transl_table=11 NZ_CP087814.1 RefSeq gene 390742 391686 . + . ID=gene-LP088_RS02065;Name=LP088_RS02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02065;old_locus_tag=LP088_02040 NZ_CP087814.1 Protein Homology CDS 390742 391686 . + 0 ID=cds-WP_078274075.1;Parent=gene-LP088_RS02065;Dbxref=Genbank:WP_078274075.1;Name=WP_078274075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519562.1;locus_tag=LP088_RS02065;product=OmpA family protein;protein_id=WP_078274075.1;transl_table=11 NZ_CP087814.1 RefSeq gene 391764 400001 . + . ID=gene-LP088_RS02070;Name=LP088_RS02070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02070 NZ_CP087814.1 Protein Homology CDS 391764 400001 . + 0 ID=cds-WP_264676087.1;Parent=gene-LP088_RS02070;Dbxref=Genbank:WP_264676087.1;Name=WP_264676087.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015140.2;locus_tag=LP088_RS02070;product=hypothetical protein;protein_id=WP_264676087.1;transl_table=11 NZ_CP087814.1 RefSeq gene 400219 400434 . + . ID=gene-LP088_RS02075;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=LP088_RS02075;old_locus_tag=LP088_02075 NZ_CP087814.1 Protein Homology CDS 400219 400434 . + 0 ID=cds-WP_029104045.1;Parent=gene-LP088_RS02075;Dbxref=Genbank:WP_029104045.1;Name=WP_029104045.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsU;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011235429.1;locus_tag=LP088_RS02075;product=30S ribosomal protein S21;protein_id=WP_029104045.1;transl_table=11 NZ_CP087814.1 RefSeq gene 400670 400972 . + . ID=gene-LP088_RS02080;Name=LP088_RS02080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02080;old_locus_tag=LP088_02080 NZ_CP087814.1 Protein Homology CDS 400670 400972 . + 0 ID=cds-WP_078274076.1;Parent=gene-LP088_RS02080;Dbxref=Genbank:WP_078274076.1;Name=WP_078274076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003658695.1;locus_tag=LP088_RS02080;product=hypothetical protein;protein_id=WP_078274076.1;transl_table=11 NZ_CP087814.1 RefSeq gene 401084 403978 . + . ID=gene-LP088_RS02085;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=LP088_RS02085;old_locus_tag=LP088_02085 NZ_CP087814.1 Protein Homology CDS 401084 403978 . + 0 ID=cds-WP_078274077.1;Parent=gene-LP088_RS02085;Dbxref=Genbank:WP_078274077.1;Name=WP_078274077.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003672054.1;locus_tag=LP088_RS02085;product=DNA polymerase I;protein_id=WP_078274077.1;transl_table=11 NZ_CP087814.1 RefSeq gene 403985 405706 . + . ID=gene-LP088_RS02090;Name=LP088_RS02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02090;old_locus_tag=LP088_02090 NZ_CP087814.1 Protein Homology CDS 403985 405706 . + 0 ID=cds-WP_078274078.1;Parent=gene-LP088_RS02090;Dbxref=Genbank:WP_078274078.1;Name=WP_078274078.1;Ontology_term=GO:0008272,GO:0015116,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=sulfate transmembrane transporter activity|0015116||IEA;go_process=sulfate transport|0008272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013108219.1;locus_tag=LP088_RS02090;product=SulP family inorganic anion transporter;protein_id=WP_078274078.1;transl_table=11 NZ_CP087814.1 RefSeq gene 406034 406360 . + . ID=gene-LP088_RS02095;Name=LP088_RS02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02095;old_locus_tag=LP088_02095 NZ_CP087814.1 Protein Homology CDS 406034 406360 . + 0 ID=cds-WP_029104049.1;Parent=gene-LP088_RS02095;Dbxref=Genbank:WP_029104049.1;Name=WP_029104049.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657357.1;locus_tag=LP088_RS02095;product=sulfur transferase domain-containing protein;protein_id=WP_029104049.1;transl_table=11 NZ_CP087814.1 RefSeq gene 406453 407964 . + . ID=gene-LP088_RS02100;Name=trpE;gbkey=Gene;gene=trpE;gene_biotype=protein_coding;locus_tag=LP088_RS02100;old_locus_tag=LP088_02100 NZ_CP087814.1 Protein Homology CDS 406453 407964 . + 0 ID=cds-WP_078274079.1;Parent=gene-LP088_RS02100;Dbxref=Genbank:WP_078274079.1;Name=WP_078274079.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;gene=trpE;go_function=anthranilate synthase activity|0004049||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005006974.1;locus_tag=LP088_RS02100;product=anthranilate synthase component I;protein_id=WP_078274079.1;transl_table=11 NZ_CP087814.1 RefSeq gene 407959 408216 . - . ID=gene-LP088_RS02105;Name=LP088_RS02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02105;old_locus_tag=LP088_02105 NZ_CP087814.1 Protein Homology CDS 407959 408216 . - 0 ID=cds-WP_078274080.1;Parent=gene-LP088_RS02105;Dbxref=Genbank:WP_078274080.1;Name=WP_078274080.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015639.2;locus_tag=LP088_RS02105;product=YkgJ family cysteine cluster protein;protein_id=WP_078274080.1;transl_table=11 NZ_CP087814.1 RefSeq gene 408209 408847 . - . ID=gene-LP088_RS02110;Name=LP088_RS02110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02110;old_locus_tag=LP088_02110 NZ_CP087814.1 GeneMarkS-2+ CDS 408209 408847 . - 0 ID=cds-WP_208624050.1;Parent=gene-LP088_RS02110;Dbxref=Genbank:WP_208624050.1;Name=WP_208624050.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS02110;product=hypothetical protein;protein_id=WP_208624050.1;transl_table=11 NZ_CP087814.1 RefSeq gene 408937 409845 . - . ID=gene-LP088_RS02115;Name=LP088_RS02115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02115;old_locus_tag=LP088_02115 NZ_CP087814.1 GeneMarkS-2+ CDS 408937 409845 . - 0 ID=cds-WP_264690406.1;Parent=gene-LP088_RS02115;Dbxref=Genbank:WP_264690406.1;Name=WP_264690406.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS02115;product=hypothetical protein;protein_id=WP_264690406.1;transl_table=11 NZ_CP087814.1 RefSeq gene 409907 410965 . - . ID=gene-LP088_RS02120;Name=LP088_RS02120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02120;old_locus_tag=LP088_02120 NZ_CP087814.1 GeneMarkS-2+ CDS 409907 410965 . - 0 ID=cds-WP_078274082.1;Parent=gene-LP088_RS02120;Dbxref=Genbank:WP_078274082.1;Name=WP_078274082.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS02120;product=chemotaxis protein;protein_id=WP_078274082.1;transl_table=11 NZ_CP087814.1 RefSeq gene 411016 411891 . - . ID=gene-LP088_RS02125;Name=LP088_RS02125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02125;old_locus_tag=LP088_02125 NZ_CP087814.1 Protein Homology CDS 411016 411891 . - 0 ID=cds-WP_078274083.1;Parent=gene-LP088_RS02125;Dbxref=Genbank:WP_078274083.1;Name=WP_078274083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003656273.1;locus_tag=LP088_RS02125;product=WYL domain-containing protein;protein_id=WP_078274083.1;transl_table=11 NZ_CP087814.1 RefSeq gene 412030 412269 . + . ID=gene-LP088_RS02130;Name=LP088_RS02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02130;old_locus_tag=LP088_02130 NZ_CP087814.1 Protein Homology CDS 412030 412269 . + 0 ID=cds-WP_078274084.1;Parent=gene-LP088_RS02130;Dbxref=Genbank:WP_078274084.1;Name=WP_078274084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000198572.1;locus_tag=LP088_RS02130;product=helix-turn-helix domain-containing protein;protein_id=WP_078274084.1;transl_table=11 NZ_CP087814.1 RefSeq gene 412561 413727 . - . ID=gene-LP088_RS02135;Name=LP088_RS02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02135;old_locus_tag=LP088_02135 NZ_CP087814.1 Protein Homology CDS 412561 413727 . - 0 ID=cds-WP_078274085.1;Parent=gene-LP088_RS02135;Dbxref=Genbank:WP_078274085.1;Name=WP_078274085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512669.1;locus_tag=LP088_RS02135;product=AI-2E family transporter;protein_id=WP_078274085.1;transl_table=11 NZ_CP087814.1 RefSeq gene 413899 414228 . - . ID=gene-LP088_RS02140;Name=LP088_RS02140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02140;old_locus_tag=LP088_02140 NZ_CP087814.1 Protein Homology CDS 413899 414228 . - 0 ID=cds-WP_208624048.1;Parent=gene-LP088_RS02140;Dbxref=Genbank:WP_208624048.1;Name=WP_208624048.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025637.2;locus_tag=LP088_RS02140;product=HNH endonuclease;protein_id=WP_208624048.1;transl_table=11 NZ_CP087814.1 RefSeq gene 414201 414932 . - . ID=gene-LP088_RS02145;Name=LP088_RS02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02145;old_locus_tag=LP088_02145 NZ_CP087814.1 GeneMarkS-2+ CDS 414201 414932 . - 0 ID=cds-WP_112742614.1;Parent=gene-LP088_RS02145;Dbxref=Genbank:WP_112742614.1;Name=WP_112742614.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS02145;product=hypothetical protein;protein_id=WP_112742614.1;transl_table=11 NZ_CP087814.1 RefSeq gene 414984 415445 . - . ID=gene-LP088_RS02150;Name=LP088_RS02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02150;old_locus_tag=LP088_02150 NZ_CP087814.1 Protein Homology CDS 414984 415445 . - 0 ID=cds-WP_078274087.1;Parent=gene-LP088_RS02150;Dbxref=Genbank:WP_078274087.1;Name=WP_078274087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520425.1;locus_tag=LP088_RS02150;product=DUF188 domain-containing protein;protein_id=WP_078274087.1;transl_table=11 NZ_CP087814.1 RefSeq gene 415442 416170 . - . ID=gene-LP088_RS02155;Name=LP088_RS02155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02155;old_locus_tag=LP088_02155 NZ_CP087814.1 Protein Homology CDS 415442 416170 . - 0 ID=cds-WP_078274088.1;Parent=gene-LP088_RS02155;Dbxref=Genbank:WP_078274088.1;Name=WP_078274088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016659410.1;locus_tag=LP088_RS02155;product=Fic family protein;protein_id=WP_078274088.1;transl_table=11 NZ_CP087814.1 RefSeq gene 416430 417590 . - . ID=gene-LP088_RS02160;Name=LP088_RS02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02160;old_locus_tag=LP088_02160 NZ_CP087814.1 Protein Homology CDS 416430 417590 . - 0 ID=cds-WP_078274090.1;Parent=gene-LP088_RS02160;Dbxref=Genbank:WP_078274090.1;Name=WP_078274090.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519279.1;locus_tag=LP088_RS02160;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_078274090.1;transl_table=11 NZ_CP087814.1 RefSeq gene 417727 418269 . - . ID=gene-LP088_RS02165;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=LP088_RS02165;old_locus_tag=LP088_02165 NZ_CP087814.1 Protein Homology CDS 417727 418269 . - 0 ID=cds-WP_078274091.1;Parent=gene-LP088_RS02165;Dbxref=Genbank:WP_078274091.1;Name=WP_078274091.1;Ontology_term=GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519722.1;locus_tag=LP088_RS02165;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_078274091.1;transl_table=11 NZ_CP087814.1 RefSeq gene 418504 419427 . - . ID=gene-LP088_RS02170;Name=LP088_RS02170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02170;old_locus_tag=LP088_02170 NZ_CP087814.1 Protein Homology CDS 418504 419427 . - 0 ID=cds-WP_264676089.1;Parent=gene-LP088_RS02170;Dbxref=Genbank:WP_264676089.1;Name=WP_264676089.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009767200.1;locus_tag=LP088_RS02170;product=metallophosphoesterase;protein_id=WP_264676089.1;transl_table=11 NZ_CP087814.1 RefSeq gene 419565 420023 . + . ID=gene-LP088_RS02175;Name=LP088_RS02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02175;old_locus_tag=LP088_02175 NZ_CP087814.1 Protein Homology CDS 419565 420023 . + 0 ID=cds-WP_264676090.1;Parent=gene-LP088_RS02175;Dbxref=Genbank:WP_264676090.1;Name=WP_264676090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016658695.1;locus_tag=LP088_RS02175;product=YcgN family cysteine cluster protein;protein_id=WP_264676090.1;transl_table=11 NZ_CP087814.1 RefSeq gene 420020 421090 . - . ID=gene-LP088_RS02180;Name=LP088_RS02180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02180;old_locus_tag=LP088_02180 NZ_CP087814.1 GeneMarkS-2+ CDS 420020 421090 . - 0 ID=cds-WP_264676091.1;Parent=gene-LP088_RS02180;Dbxref=Genbank:WP_264676091.1;Name=WP_264676091.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS02180;product=hypothetical protein;protein_id=WP_264676091.1;transl_table=11 NZ_CP087814.1 RefSeq gene 421243 422106 . + . ID=gene-LP088_RS02185;Name=LP088_RS02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02185;old_locus_tag=LP088_02185 NZ_CP087814.1 Protein Homology CDS 421243 422106 . + 0 ID=cds-WP_029104063.1;Parent=gene-LP088_RS02185;Dbxref=Genbank:WP_029104063.1;Name=WP_029104063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019673984.1;locus_tag=LP088_RS02185;product=CBS domain-containing protein;protein_id=WP_029104063.1;transl_table=11 NZ_CP087814.1 RefSeq gene 422236 423786 . - . ID=gene-LP088_RS02190;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=LP088_RS02190;old_locus_tag=LP088_02190 NZ_CP087814.1 Protein Homology CDS 422236 423786 . - 0 ID=cds-WP_264676092.1;Parent=gene-LP088_RS02190;Dbxref=Genbank:WP_264676092.1;Name=WP_264676092.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003673659.1;locus_tag=LP088_RS02190;product=murein biosynthesis integral membrane protein MurJ;protein_id=WP_264676092.1;transl_table=11 NZ_CP087814.1 RefSeq gene 424231 424575 . - . ID=gene-LP088_RS02195;Name=LP088_RS02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02195;old_locus_tag=LP088_02195 NZ_CP087814.1 Protein Homology CDS 424231 424575 . - 0 ID=cds-WP_181879525.1;Parent=gene-LP088_RS02195;Dbxref=Genbank:WP_181879525.1;Name=WP_181879525.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF013088.2;locus_tag=LP088_RS02195;product=EamA family transporter;protein_id=WP_181879525.1;transl_table=11 NZ_CP087814.1 RefSeq gene 424745 424903 . - . ID=gene-LP088_RS02200;Name=LP088_RS02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02200;old_locus_tag=LP088_02200 NZ_CP087814.1 GeneMarkS-2+ CDS 424745 424903 . - 0 ID=cds-WP_264676093.1;Parent=gene-LP088_RS02200;Dbxref=Genbank:WP_264676093.1;Name=WP_264676093.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS02200;product=hypothetical protein;protein_id=WP_264676093.1;transl_table=11 NZ_CP087814.1 RefSeq gene 424997 425584 . - . ID=gene-LP088_RS02205;Name=ampD;gbkey=Gene;gene=ampD;gene_biotype=protein_coding;locus_tag=LP088_RS02205;old_locus_tag=LP088_02205 NZ_CP087814.1 Protein Homology CDS 424997 425584 . - 0 ID=cds-WP_264676094.1;Parent=gene-LP088_RS02205;Dbxref=Genbank:WP_264676094.1;Name=WP_264676094.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=ampD;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444198.1;locus_tag=LP088_RS02205;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;protein_id=WP_264676094.1;transl_table=11 NZ_CP087814.1 RefSeq gene 425657 427480 . + . ID=gene-LP088_RS02210;Name=LP088_RS02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02210;old_locus_tag=LP088_02210 NZ_CP087814.1 Protein Homology CDS 425657 427480 . + 0 ID=cds-WP_264676095.1;Parent=gene-LP088_RS02210;Dbxref=Genbank:WP_264676095.1;Name=WP_264676095.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024779.2;locus_tag=LP088_RS02210;product=DUF4105 domain-containing protein;protein_id=WP_264676095.1;transl_table=11 NZ_CP087814.1 RefSeq gene 427496 428284 . - . ID=gene-LP088_RS02215;Name=LP088_RS02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02215;old_locus_tag=LP088_02215 NZ_CP087814.1 Protein Homology CDS 427496 428284 . - 0 ID=cds-WP_078274100.1;Parent=gene-LP088_RS02215;Dbxref=Genbank:WP_078274100.1;Name=WP_078274100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007395520.1;locus_tag=LP088_RS02215;product=RNA methyltransferase;protein_id=WP_078274100.1;transl_table=11 NZ_CP087814.1 RefSeq gene 428305 428733 . - . ID=gene-LP088_RS02220;Name=LP088_RS02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02220;old_locus_tag=LP088_02220 NZ_CP087814.1 GeneMarkS-2+ CDS 428305 428733 . - 0 ID=cds-WP_143821681.1;Parent=gene-LP088_RS02220;Dbxref=Genbank:WP_143821681.1;Name=WP_143821681.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS02220;product=hypothetical protein;protein_id=WP_143821681.1;transl_table=11 NZ_CP087814.1 RefSeq gene 428802 429815 . - . ID=gene-LP088_RS02225;Name=LP088_RS02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02225;old_locus_tag=LP088_02225 NZ_CP087814.1 Protein Homology CDS 428802 429815 . - 0 ID=cds-WP_078274102.1;Parent=gene-LP088_RS02225;Dbxref=Genbank:WP_078274102.1;Name=WP_078274102.1;Ontology_term=GO:0005975,GO:0042132;gbkey=CDS;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520472.1;locus_tag=LP088_RS02225;product=class 1 fructose-bisphosphatase;protein_id=WP_078274102.1;transl_table=11 NZ_CP087814.1 RefSeq gene 430857 431804 . - . ID=gene-LP088_RS02230;Name=LP088_RS02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02230;old_locus_tag=LP088_02230 NZ_CP087814.1 Protein Homology CDS 430857 431804 . - 0 ID=cds-WP_078274103.1;Parent=gene-LP088_RS02230;Dbxref=Genbank:WP_078274103.1;Name=WP_078274103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001298109.1;locus_tag=LP088_RS02230;product=ribose-phosphate pyrophosphokinase;protein_id=WP_078274103.1;transl_table=11 NZ_CP087814.1 RefSeq gene 431965 432040 . - . ID=gene-LP088_RS02235;Name=LP088_RS02235;gbkey=Gene;gene_biotype=tRNA;locus_tag=LP088_RS02235;old_locus_tag=LP088_02235 NZ_CP087814.1 tRNAscan-SE tRNA 431965 432040 . - . ID=rna-LP088_RS02235;Parent=gene-LP088_RS02235;anticodon=(pos:complement(432005..432007));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS02235;product=tRNA-Gln NZ_CP087814.1 tRNAscan-SE exon 431965 432040 . - . ID=exon-LP088_RS02235-1;Parent=rna-LP088_RS02235;anticodon=(pos:complement(432005..432007));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS02235;product=tRNA-Gln NZ_CP087814.1 RefSeq gene 432078 432153 . - . ID=gene-LP088_RS02240;Name=LP088_RS02240;gbkey=Gene;gene_biotype=tRNA;locus_tag=LP088_RS02240;old_locus_tag=LP088_02240 NZ_CP087814.1 tRNAscan-SE tRNA 432078 432153 . - . ID=rna-LP088_RS02240;Parent=gene-LP088_RS02240;anticodon=(pos:complement(432118..432120));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS02240;product=tRNA-Gln NZ_CP087814.1 tRNAscan-SE exon 432078 432153 . - . ID=exon-LP088_RS02240-1;Parent=rna-LP088_RS02240;anticodon=(pos:complement(432118..432120));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS02240;product=tRNA-Gln NZ_CP087814.1 RefSeq gene 432262 433131 . - . ID=gene-LP088_RS02245;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=LP088_RS02245;old_locus_tag=LP088_02245 NZ_CP087814.1 Protein Homology CDS 432262 433131 . - 0 ID=cds-WP_078274104.1;Parent=gene-LP088_RS02245;Dbxref=Genbank:WP_078274104.1;Name=WP_078274104.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279485.1;locus_tag=LP088_RS02245;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_078274104.1;transl_table=11 NZ_CP087814.1 RefSeq gene 433136 433711 . - . ID=gene-LP088_RS02250;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=LP088_RS02250;old_locus_tag=LP088_02250 NZ_CP087814.1 Protein Homology CDS 433136 433711 . - 0 ID=cds-WP_029104075.1;Parent=gene-LP088_RS02250;Dbxref=Genbank:WP_029104075.1;Name=WP_029104075.1;Ontology_term=GO:0009306,GO:0008320;gbkey=CDS;gene=lolB;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003671443.1;locus_tag=LP088_RS02250;product=lipoprotein insertase outer membrane protein LolB;protein_id=WP_029104075.1;transl_table=11 NZ_CP087814.1 RefSeq gene 434451 436478 . - . ID=gene-LP088_RS02255;Name=LP088_RS02255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02255;old_locus_tag=LP088_02255 NZ_CP087814.1 GeneMarkS-2+ CDS 434451 436478 . - 0 ID=cds-WP_112742599.1;Parent=gene-LP088_RS02255;Dbxref=Genbank:WP_112742599.1;Name=WP_112742599.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS02255;product=hypothetical protein;protein_id=WP_112742599.1;transl_table=11 NZ_CP087814.1 RefSeq gene 437450 438745 . - . ID=gene-LP088_RS02260;Name=LP088_RS02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02260;old_locus_tag=LP088_02260 NZ_CP087814.1 Protein Homology CDS 437450 438745 . - 0 ID=cds-WP_112742597.1;Parent=gene-LP088_RS02260;Dbxref=Genbank:WP_112742597.1;Name=WP_112742597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519371.1;locus_tag=LP088_RS02260;product=CapA family protein;protein_id=WP_112742597.1;transl_table=11 NZ_CP087814.1 RefSeq gene 438909 440069 . - . ID=gene-LP088_RS02265;Name=LP088_RS02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02265;old_locus_tag=LP088_02265 NZ_CP087814.1 Protein Homology CDS 438909 440069 . - 0 ID=cds-WP_228157855.1;Parent=gene-LP088_RS02265;Dbxref=Genbank:WP_228157855.1;Name=WP_228157855.1;Ontology_term=GO:0006040,GO:0009254,GO:0005524,GO:0016773;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=amino sugar metabolic process|0006040||IEA,peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007395935.1;locus_tag=LP088_RS02265;product=anhydro-N-acetylmuramic acid kinase;protein_id=WP_228157855.1;transl_table=11 NZ_CP087814.1 RefSeq gene 440210 441415 . + . ID=gene-LP088_RS02270;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=LP088_RS02270;old_locus_tag=LP088_02270 NZ_CP087814.1 Protein Homology CDS 440210 441415 . + 0 ID=cds-WP_078274108.1;Parent=gene-LP088_RS02270;Dbxref=Genbank:WP_078274108.1;Name=WP_078274108.1;Ontology_term=GO:0006437,GO:0004831,GO:0005737;gbkey=CDS;gene=tyrS;go_component=cytoplasm|0005737||IEA;go_function=tyrosine-tRNA ligase activity|0004831||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519084.1;locus_tag=LP088_RS02270;product=tyrosine--tRNA ligase;protein_id=WP_078274108.1;transl_table=11 NZ_CP087814.1 RefSeq gene 441430 441834 . + . ID=gene-LP088_RS02275;Name=LP088_RS02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02275;old_locus_tag=LP088_02275 NZ_CP087814.1 GeneMarkS-2+ CDS 441430 441834 . + 0 ID=cds-WP_143821683.1;Parent=gene-LP088_RS02275;Dbxref=Genbank:WP_143821683.1;Name=WP_143821683.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS02275;product=hypothetical protein;protein_id=WP_143821683.1;transl_table=11 NZ_CP087814.1 RefSeq gene 441840 442325 . + . ID=gene-LP088_RS02280;Name=LP088_RS02280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02280;old_locus_tag=LP088_02280 NZ_CP087814.1 GeneMarkS-2+ CDS 441840 442325 . + 0 ID=cds-WP_078274110.1;Parent=gene-LP088_RS02280;Dbxref=Genbank:WP_078274110.1;Name=WP_078274110.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS02280;product=hypothetical protein;protein_id=WP_078274110.1;transl_table=11 NZ_CP087814.1 RefSeq gene 442318 442545 . + . ID=gene-LP088_RS02285;Name=LP088_RS02285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02285;old_locus_tag=LP088_02285 NZ_CP087814.1 Protein Homology CDS 442318 442545 . + 0 ID=cds-WP_078274111.1;Parent=gene-LP088_RS02285;Dbxref=Genbank:WP_078274111.1;Name=WP_078274111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011281225.1;locus_tag=LP088_RS02285;product=DUF1653 domain-containing protein;protein_id=WP_078274111.1;transl_table=11 NZ_CP087814.1 RefSeq gene 442539 442940 . + . ID=gene-LP088_RS02290;Name=LP088_RS02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02290;old_locus_tag=LP088_02290 NZ_CP087814.1 Protein Homology CDS 442539 442940 . + 0 ID=cds-WP_078274112.1;Parent=gene-LP088_RS02290;Dbxref=Genbank:WP_078274112.1;Name=WP_078274112.1;Ontology_term=GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005252621.1;locus_tag=LP088_RS02290;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_078274112.1;transl_table=11 NZ_CP087814.1 RefSeq gene 443468 444998 . + . ID=gene-LP088_RS02295;Name=LP088_RS02295;gbkey=Gene;gene_biotype=rRNA;locus_tag=LP088_RS02295;old_locus_tag=LP088_02295 NZ_CP087814.1 cmsearch rRNA 443468 444998 . + . ID=rna-LP088_RS02295;Parent=gene-LP088_RS02295;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LP088_RS02295;product=16S ribosomal RNA NZ_CP087814.1 cmsearch exon 443468 444998 . + . ID=exon-LP088_RS02295-1;Parent=rna-LP088_RS02295;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LP088_RS02295;product=16S ribosomal RNA NZ_CP087814.1 RefSeq gene 445060 445136 . + . ID=gene-LP088_RS02300;Name=LP088_RS02300;gbkey=Gene;gene_biotype=tRNA;locus_tag=LP088_RS02300;old_locus_tag=LP088_02300 NZ_CP087814.1 tRNAscan-SE tRNA 445060 445136 . + . ID=rna-LP088_RS02300;Parent=gene-LP088_RS02300;anticodon=(pos:445094..445096);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS02300;product=tRNA-Ile NZ_CP087814.1 tRNAscan-SE exon 445060 445136 . + . ID=exon-LP088_RS02300-1;Parent=rna-LP088_RS02300;anticodon=(pos:445094..445096);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS02300;product=tRNA-Ile NZ_CP087814.1 RefSeq gene 445142 445217 . + . ID=gene-LP088_RS02305;Name=LP088_RS02305;gbkey=Gene;gene_biotype=tRNA;locus_tag=LP088_RS02305;old_locus_tag=LP088_02305 NZ_CP087814.1 tRNAscan-SE tRNA 445142 445217 . + . ID=rna-LP088_RS02305;Parent=gene-LP088_RS02305;anticodon=(pos:445175..445177);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS02305;product=tRNA-Ala NZ_CP087814.1 tRNAscan-SE exon 445142 445217 . + . ID=exon-LP088_RS02305-1;Parent=rna-LP088_RS02305;anticodon=(pos:445175..445177);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS02305;product=tRNA-Ala NZ_CP087814.1 RefSeq gene 445534 448759 . + . ID=gene-LP088_RS02310;Name=LP088_RS02310;gbkey=Gene;gene_biotype=rRNA;locus_tag=LP088_RS02310;old_locus_tag=LP088_02310 NZ_CP087814.1 cmsearch rRNA 445534 448759 . + . ID=rna-LP088_RS02310;Parent=gene-LP088_RS02310;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LP088_RS02310;product=23S ribosomal RNA NZ_CP087814.1 cmsearch exon 445534 448759 . + . ID=exon-LP088_RS02310-1;Parent=rna-LP088_RS02310;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LP088_RS02310;product=23S ribosomal RNA NZ_CP087814.1 RefSeq gene 448922 449035 . + . ID=gene-LP088_RS02315;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=LP088_RS02315;old_locus_tag=LP088_02315 NZ_CP087814.1 cmsearch rRNA 448922 449035 . + . ID=rna-LP088_RS02315;Parent=gene-LP088_RS02315;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LP088_RS02315;product=5S ribosomal RNA NZ_CP087814.1 cmsearch exon 448922 449035 . + . ID=exon-LP088_RS02315-1;Parent=rna-LP088_RS02315;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LP088_RS02315;product=5S ribosomal RNA NZ_CP087814.1 RefSeq gene 449170 449682 . + . ID=gene-LP088_RS02320;Name=LP088_RS02320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02320;old_locus_tag=LP088_02320 NZ_CP087814.1 Protein Homology CDS 449170 449682 . + 0 ID=cds-WP_112742596.1;Parent=gene-LP088_RS02320;Dbxref=Genbank:WP_112742596.1;Name=WP_112742596.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023444.2;locus_tag=LP088_RS02320;product=GspH/FimT family protein;protein_id=WP_112742596.1;transl_table=11 NZ_CP087814.1 RefSeq gene 449688 450179 . - . ID=gene-LP088_RS02325;Name=LP088_RS02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02325;old_locus_tag=LP088_02325 NZ_CP087814.1 Protein Homology CDS 449688 450179 . - 0 ID=cds-WP_078275435.1;Parent=gene-LP088_RS02325;Dbxref=Genbank:WP_078275435.1;Name=WP_078275435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007395887.1;locus_tag=LP088_RS02325;product=heavy metal-binding domain-containing protein;protein_id=WP_078275435.1;transl_table=11 NZ_CP087814.1 RefSeq gene 450185 450559 . - . ID=gene-LP088_RS02330;Name=LP088_RS02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02330;old_locus_tag=LP088_02330 NZ_CP087814.1 Protein Homology CDS 450185 450559 . - 0 ID=cds-WP_078275436.1;Parent=gene-LP088_RS02330;Dbxref=Genbank:WP_078275436.1;Name=WP_078275436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011961392.1;locus_tag=LP088_RS02330;product=YbjQ family protein;protein_id=WP_078275436.1;transl_table=11 NZ_CP087814.1 RefSeq gene 450809 451069 . + . ID=gene-LP088_RS02335;Name=LP088_RS02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02335;old_locus_tag=LP088_02335 NZ_CP087814.1 Protein Homology CDS 450809 451069 . + 0 ID=cds-WP_029103198.1;Parent=gene-LP088_RS02335;Dbxref=Genbank:WP_029103198.1;Name=WP_029103198.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003656864.1;locus_tag=LP088_RS02335;product=type B 50S ribosomal protein L31;protein_id=WP_029103198.1;transl_table=11 NZ_CP087814.1 RefSeq gene 451200 451901 . - . ID=gene-LP088_RS02340;Name=LP088_RS02340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02340;old_locus_tag=LP088_02340 NZ_CP087814.1 Protein Homology CDS 451200 451901 . - 0 ID=cds-WP_264676051.1-3;Parent=gene-LP088_RS02340;Dbxref=Genbank:WP_264676051.1;Name=WP_264676051.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015586042.1;locus_tag=LP088_RS02340;product=IS1 family transposase;protein_id=WP_264676051.1;transl_table=11 NZ_CP087814.1 RefSeq gene 452311 452517 . + . ID=gene-LP088_RS02345;Name=LP088_RS02345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02345;old_locus_tag=LP088_02345 NZ_CP087814.1 GeneMarkS-2+ CDS 452311 452517 . + 0 ID=cds-WP_078275437.1;Parent=gene-LP088_RS02345;Dbxref=Genbank:WP_078275437.1;Name=WP_078275437.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS02345;product=hypothetical protein;protein_id=WP_078275437.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 453041 453470 . + . ID=gene-LP088_RS02350;Name=LP088_RS02350;end_range=453470,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS02350;old_locus_tag=LP088_02350;partial=true;pseudo=true NZ_CP087814.1 Protein Homology CDS 453041 453470 . + 0 ID=cds-LP088_RS02350;Parent=gene-LP088_RS02350;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=453470,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_182073071.1;locus_tag=LP088_RS02350;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP087814.1 RefSeq gene 453819 453986 . + . ID=gene-LP088_RS02355;Name=LP088_RS02355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02355;old_locus_tag=LP088_02355 NZ_CP087814.1 GeneMarkS-2+ CDS 453819 453986 . + 0 ID=cds-WP_162860430.1;Parent=gene-LP088_RS02355;Dbxref=Genbank:WP_162860430.1;Name=WP_162860430.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS02355;product=hypothetical protein;protein_id=WP_162860430.1;transl_table=11 NZ_CP087814.1 RefSeq gene 454208 456055 . - . ID=gene-LP088_RS02360;Name=LP088_RS02360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02360;old_locus_tag=LP088_02360 NZ_CP087814.1 Protein Homology CDS 454208 456055 . - 0 ID=cds-WP_078273802.1;Parent=gene-LP088_RS02360;Dbxref=Genbank:WP_078273802.1;Name=WP_078273802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013197785.1;locus_tag=LP088_RS02360;product=hypothetical protein;protein_id=WP_078273802.1;transl_table=11 NZ_CP087814.1 RefSeq gene 456697 457953 . + . ID=gene-LP088_RS02365;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=LP088_RS02365;old_locus_tag=LP088_02365 NZ_CP087814.1 Protein Homology CDS 456697 457953 . + 0 ID=cds-WP_112742592.1;Parent=gene-LP088_RS02365;Dbxref=Genbank:WP_112742592.1;Name=WP_112742592.1;Ontology_term=GO:0006353,GO:0004386,GO:0008186;gbkey=CDS;gene=rho;go_function=helicase activity|0004386||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004997780.1;locus_tag=LP088_RS02365;product=transcription termination factor Rho;protein_id=WP_112742592.1;transl_table=11 NZ_CP087814.1 RefSeq gene 458333 458749 . + . ID=gene-LP088_RS02370;Name=LP088_RS02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02370;old_locus_tag=LP088_02370 NZ_CP087814.1 GeneMarkS-2+ CDS 458333 458749 . + 0 ID=cds-WP_264684090.1;Parent=gene-LP088_RS02370;Dbxref=Genbank:WP_264684090.1;Name=WP_264684090.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS02370;product=hypothetical protein;protein_id=WP_264684090.1;transl_table=11 NZ_CP087814.1 RefSeq gene 458883 460709 . + . ID=gene-LP088_RS02375;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=LP088_RS02375;old_locus_tag=LP088_02375 NZ_CP087814.1 Protein Homology CDS 458883 460709 . + 0 ID=cds-WP_264676096.1;Parent=gene-LP088_RS02375;Dbxref=Genbank:WP_264676096.1;Name=WP_264676096.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017395825.1;locus_tag=LP088_RS02375;product=excinuclease ABC subunit UvrC;protein_id=WP_264676096.1;transl_table=11 NZ_CP087814.1 RefSeq gene 460849 462306 . - . ID=gene-LP088_RS02380;Name=LP088_RS02380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02380;old_locus_tag=LP088_02380 NZ_CP087814.1 Protein Homology CDS 460849 462306 . - 0 ID=cds-WP_264676097.1;Parent=gene-LP088_RS02380;Dbxref=Genbank:WP_264676097.1;Name=WP_264676097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000505845.1;locus_tag=LP088_RS02380;product=anion permease;protein_id=WP_264676097.1;transl_table=11 NZ_CP087814.1 RefSeq gene 462902 463309 . + . ID=gene-LP088_RS02385;Name=LP088_RS02385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02385;old_locus_tag=LP088_02385 NZ_CP087814.1 GeneMarkS-2+ CDS 462902 463309 . + 0 ID=cds-WP_078273807.1;Parent=gene-LP088_RS02385;Dbxref=Genbank:WP_078273807.1;Name=WP_078273807.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS02385;product=hypothetical protein;protein_id=WP_078273807.1;transl_table=11 NZ_CP087814.1 RefSeq gene 463602 464318 . - . ID=gene-LP088_RS02390;Name=LP088_RS02390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02390;old_locus_tag=LP088_02390 NZ_CP087814.1 Protein Homology CDS 463602 464318 . - 0 ID=cds-WP_078273808.1;Parent=gene-LP088_RS02390;Dbxref=Genbank:WP_078273808.1;Name=WP_078273808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009767281.1;locus_tag=LP088_RS02390;product=pantothenate kinase;protein_id=WP_078273808.1;transl_table=11 NZ_CP087814.1 RefSeq gene 464492 465334 . - . ID=gene-LP088_RS02395;Name=LP088_RS02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02395;old_locus_tag=LP088_02395 NZ_CP087814.1 Protein Homology CDS 464492 465334 . - 0 ID=cds-WP_264676098.1;Parent=gene-LP088_RS02395;Dbxref=Genbank:WP_264676098.1;Name=WP_264676098.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;go_function=biotin-[acetyl-CoA-carboxylase] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009767280.1;locus_tag=LP088_RS02395;product=biotin--[acetyl-CoA-carboxylase] ligase;protein_id=WP_264676098.1;transl_table=11 NZ_CP087814.1 RefSeq gene 465413 466222 . + . ID=gene-LP088_RS02400;Name=LP088_RS02400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02400;old_locus_tag=LP088_02400 NZ_CP087814.1 Protein Homology CDS 465413 466222 . + 0 ID=cds-WP_078273810.1;Parent=gene-LP088_RS02400;Dbxref=Genbank:WP_078273810.1;Name=WP_078273810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007394206.1;locus_tag=LP088_RS02400;product=sulfite exporter TauE/SafE family protein;protein_id=WP_078273810.1;transl_table=11 NZ_CP087814.1 RefSeq gene 466248 467606 . - . ID=gene-LP088_RS02405;Name=LP088_RS02405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02405;old_locus_tag=LP088_02405 NZ_CP087814.1 Protein Homology CDS 466248 467606 . - 0 ID=cds-WP_162860428.1;Parent=gene-LP088_RS02405;Dbxref=Genbank:WP_162860428.1;Name=WP_162860428.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: protein motif:HMM:NF013579.2;locus_tag=LP088_RS02405;product=restriction endonuclease subunit S;protein_id=WP_162860428.1;transl_table=11 NZ_CP087814.1 RefSeq gene 467530 467907 . - . ID=gene-LP088_RS02410;Name=LP088_RS02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02410;old_locus_tag=LP088_02410 NZ_CP087814.1 GeneMarkS-2+ CDS 467530 467907 . - 0 ID=cds-WP_112742588.1;Parent=gene-LP088_RS02410;Dbxref=Genbank:WP_112742588.1;Name=WP_112742588.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS02410;product=hypothetical protein;protein_id=WP_112742588.1;transl_table=11 NZ_CP087814.1 RefSeq gene 467919 468473 . - . ID=gene-LP088_RS02415;Name=LP088_RS02415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02415 NZ_CP087814.1 Protein Homology CDS 467919 468473 . - 0 ID=cds-WP_158079631.1;Parent=gene-LP088_RS02415;Dbxref=Genbank:WP_158079631.1;Name=WP_158079631.1;Ontology_term=GO:0006306,GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;go_process=DNA methylation|0006306||IEA;inference=COORDINATES: protein motif:HMM:NF014442.2;locus_tag=LP088_RS02415;product=N-6 DNA methylase;protein_id=WP_158079631.1;transl_table=11 NZ_CP087814.1 RefSeq gene 468488 469954 . - . ID=gene-LP088_RS02420;Name=LP088_RS02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02420;old_locus_tag=LP088_02415 NZ_CP087814.1 Protein Homology CDS 468488 469954 . - 0 ID=cds-WP_264676100.1;Parent=gene-LP088_RS02420;Dbxref=Genbank:WP_264676100.1;Name=WP_264676100.1;Ontology_term=GO:0006306,GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;go_process=DNA methylation|0006306||IEA;inference=COORDINATES: protein motif:HMM:NF014442.2;locus_tag=LP088_RS02420;product=N-6 DNA methylase;protein_id=WP_264676100.1;transl_table=11 NZ_CP087814.1 RefSeq gene 470040 473840 . + . ID=gene-LP088_RS02425;Name=LP088_RS02425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02425;old_locus_tag=LP088_02420 NZ_CP087814.1 Protein Homology CDS 470040 473840 . + 0 ID=cds-WP_228157710.1;Parent=gene-LP088_RS02425;Dbxref=Genbank:WP_228157710.1;Name=WP_228157710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003656463.1;locus_tag=LP088_RS02425;product=AAA family ATPase;protein_id=WP_228157710.1;transl_table=11 NZ_CP087814.1 RefSeq gene 474176 474595 . - . ID=gene-LP088_RS02430;Name=LP088_RS02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02430;old_locus_tag=LP088_02425 NZ_CP087814.1 Protein Homology CDS 474176 474595 . - 0 ID=cds-WP_112741841.1;Parent=gene-LP088_RS02430;Dbxref=Genbank:WP_112741841.1;Name=WP_112741841.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012920.2;locus_tag=LP088_RS02430;product=S24 family peptidase;protein_id=WP_112741841.1;transl_table=11 NZ_CP087814.1 RefSeq gene 474592 474879 . - . ID=gene-LP088_RS02435;Name=LP088_RS02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02435;old_locus_tag=LP088_02430 NZ_CP087814.1 GeneMarkS-2+ CDS 474592 474879 . - 0 ID=cds-WP_078274962.1;Parent=gene-LP088_RS02435;Dbxref=Genbank:WP_078274962.1;Name=WP_078274962.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS02435;product=ORF6C domain-containing protein;protein_id=WP_078274962.1;transl_table=11 NZ_CP087814.1 RefSeq gene 475074 475373 . - . ID=gene-LP088_RS02440;Name=LP088_RS02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02440;old_locus_tag=LP088_02435 NZ_CP087814.1 Protein Homology CDS 475074 475373 . - 0 ID=cds-WP_078274961.1;Parent=gene-LP088_RS02440;Dbxref=Genbank:WP_078274961.1;Name=WP_078274961.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024949.2;locus_tag=LP088_RS02440;product=helix-turn-helix domain-containing protein;protein_id=WP_078274961.1;transl_table=11 NZ_CP087814.1 RefSeq gene 475538 475747 . + . ID=gene-LP088_RS02445;Name=LP088_RS02445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02445;old_locus_tag=LP088_02440 NZ_CP087814.1 Protein Homology CDS 475538 475747 . + 0 ID=cds-WP_078274960.1;Parent=gene-LP088_RS02445;Dbxref=Genbank:WP_078274960.1;Name=WP_078274960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001510316.1;locus_tag=LP088_RS02445;product=hypothetical protein;protein_id=WP_078274960.1;transl_table=11 NZ_CP087814.1 RefSeq gene 475762 475953 . + . ID=gene-LP088_RS02450;Name=LP088_RS02450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02450;old_locus_tag=LP088_02445 NZ_CP087814.1 Protein Homology CDS 475762 475953 . + 0 ID=cds-WP_264676101.1;Parent=gene-LP088_RS02450;Dbxref=Genbank:WP_264676101.1;Name=WP_264676101.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF014380.2;locus_tag=LP088_RS02450;product=DNA-binding protein;protein_id=WP_264676101.1;transl_table=11 NZ_CP087814.1 RefSeq gene 475962 476162 . + . ID=gene-LP088_RS02455;Name=LP088_RS02455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02455;old_locus_tag=LP088_02450 NZ_CP087814.1 Protein Homology CDS 475962 476162 . + 0 ID=cds-WP_264676324.1;Parent=gene-LP088_RS02455;Dbxref=Genbank:WP_264676324.1;Name=WP_264676324.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019896.2;locus_tag=LP088_RS02455;product=hypothetical protein;protein_id=WP_264676324.1;transl_table=11 NZ_CP087814.1 RefSeq gene 476240 476992 . + . ID=gene-LP088_RS02460;Name=LP088_RS02460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02460;old_locus_tag=LP088_02455 NZ_CP087814.1 GeneMarkS-2+ CDS 476240 476992 . + 0 ID=cds-WP_078274945.1;Parent=gene-LP088_RS02460;Dbxref=Genbank:WP_078274945.1;Name=WP_078274945.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS02460;product=hypothetical protein;protein_id=WP_078274945.1;transl_table=11 NZ_CP087814.1 RefSeq gene 477036 477380 . - . ID=gene-LP088_RS02465;Name=LP088_RS02465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02465;old_locus_tag=LP088_02460 NZ_CP087814.1 Protein Homology CDS 477036 477380 . - 0 ID=cds-WP_078274944.1;Parent=gene-LP088_RS02465;Dbxref=Genbank:WP_078274944.1;Name=WP_078274944.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024252.2;locus_tag=LP088_RS02465;product=helix-turn-helix domain-containing protein;protein_id=WP_078274944.1;transl_table=11 NZ_CP087814.1 RefSeq gene 477503 477709 . + . ID=gene-LP088_RS02470;Name=LP088_RS02470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02470;old_locus_tag=LP088_02465 NZ_CP087814.1 Protein Homology CDS 477503 477709 . + 0 ID=cds-WP_264676102.1;Parent=gene-LP088_RS02470;Dbxref=Genbank:WP_264676102.1;Name=WP_264676102.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04111.1;locus_tag=LP088_RS02470;product=DNA-binding protein;protein_id=WP_264676102.1;transl_table=11 NZ_CP087814.1 RefSeq gene 477816 478415 . + . ID=gene-LP088_RS02475;Name=LP088_RS02475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02475;old_locus_tag=LP088_02470 NZ_CP087814.1 Protein Homology CDS 477816 478415 . + 0 ID=cds-WP_078274942.1;Parent=gene-LP088_RS02475;Dbxref=Genbank:WP_078274942.1;Name=WP_078274942.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019945.2;locus_tag=LP088_RS02475;product=antA/AntB antirepressor family protein;protein_id=WP_078274942.1;transl_table=11 NZ_CP087814.1 RefSeq gene 478417 478632 . + . ID=gene-LP088_RS02480;Name=LP088_RS02480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02480;old_locus_tag=LP088_02475 NZ_CP087814.1 GeneMarkS-2+ CDS 478417 478632 . + 0 ID=cds-WP_078274941.1;Parent=gene-LP088_RS02480;Dbxref=Genbank:WP_078274941.1;Name=WP_078274941.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS02480;product=hypothetical protein;protein_id=WP_078274941.1;transl_table=11 NZ_CP087814.1 RefSeq gene 478775 478963 . + . ID=gene-LP088_RS02485;Name=LP088_RS02485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02485;old_locus_tag=LP088_02480 NZ_CP087814.1 Protein Homology CDS 478775 478963 . + 0 ID=cds-WP_078274940.1;Parent=gene-LP088_RS02485;Dbxref=Genbank:WP_078274940.1;Name=WP_078274940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000838146.1;locus_tag=LP088_RS02485;product=type II toxin-antitoxin system HicA family toxin;protein_id=WP_078274940.1;transl_table=11 NZ_CP087814.1 RefSeq gene 479026 479433 . + . ID=gene-LP088_RS02490;Name=LP088_RS02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02490;old_locus_tag=LP088_02485 NZ_CP087814.1 Protein Homology CDS 479026 479433 . + 0 ID=cds-WP_112741846.1;Parent=gene-LP088_RS02490;Dbxref=Genbank:WP_112741846.1;Name=WP_112741846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003658102.1;locus_tag=LP088_RS02490;product=type II toxin-antitoxin system HicB family antitoxin;protein_id=WP_112741846.1;transl_table=11 NZ_CP087814.1 RefSeq gene 479509 480480 . + . ID=gene-LP088_RS02495;Name=LP088_RS02495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02495;old_locus_tag=LP088_02490 NZ_CP087814.1 Protein Homology CDS 479509 480480 . + 0 ID=cds-WP_112741847.1;Parent=gene-LP088_RS02495;Dbxref=Genbank:WP_112741847.1;Name=WP_112741847.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: protein motif:HMM:TIGR01760.1;locus_tag=LP088_RS02495;product=phage tail tape measure protein;protein_id=WP_112741847.1;transl_table=11 NZ_CP087814.1 RefSeq gene 480477 480809 . + . ID=gene-LP088_RS02500;Name=LP088_RS02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02500;old_locus_tag=LP088_02495 NZ_CP087814.1 GeneMarkS-2+ CDS 480477 480809 . + 0 ID=cds-WP_112741848.1;Parent=gene-LP088_RS02500;Dbxref=Genbank:WP_112741848.1;Name=WP_112741848.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS02500;product=hypothetical protein;protein_id=WP_112741848.1;transl_table=11 NZ_CP087814.1 RefSeq gene 480743 481180 . + . ID=gene-LP088_RS02505;Name=LP088_RS02505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02505;old_locus_tag=LP088_02500 NZ_CP087814.1 GeneMarkS-2+ CDS 480743 481180 . + 0 ID=cds-WP_162860346.1;Parent=gene-LP088_RS02505;Dbxref=Genbank:WP_162860346.1;Name=WP_162860346.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS02505;product=hypothetical protein;protein_id=WP_162860346.1;transl_table=11 NZ_CP087814.1 RefSeq gene 481234 482040 . + . ID=gene-LP088_RS02510;Name=LP088_RS02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02510;old_locus_tag=LP088_02505 NZ_CP087814.1 GeneMarkS-2+ CDS 481234 482040 . + 0 ID=cds-WP_112741850.1;Parent=gene-LP088_RS02510;Dbxref=Genbank:WP_112741850.1;Name=WP_112741850.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS02510;product=hypothetical protein;protein_id=WP_112741850.1;transl_table=11 NZ_CP087814.1 RefSeq gene 482041 482385 . + . ID=gene-LP088_RS02515;Name=LP088_RS02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02515;old_locus_tag=LP088_02510 NZ_CP087814.1 GeneMarkS-2+ CDS 482041 482385 . + 0 ID=cds-WP_078274937.1;Parent=gene-LP088_RS02515;Dbxref=Genbank:WP_078274937.1;Name=WP_078274937.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS02515;product=hypothetical protein;protein_id=WP_078274937.1;transl_table=11 NZ_CP087814.1 RefSeq gene 482373 484202 . + . ID=gene-LP088_RS02520;Name=LP088_RS02520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02520;old_locus_tag=LP088_02515 NZ_CP087814.1 GeneMarkS-2+ CDS 482373 484202 . + 0 ID=cds-WP_078274936.1;Parent=gene-LP088_RS02520;Dbxref=Genbank:WP_078274936.1;Name=WP_078274936.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS02520;product=hypothetical protein;protein_id=WP_078274936.1;transl_table=11 NZ_CP087814.1 RefSeq gene 484261 484485 . + . ID=gene-LP088_RS02525;Name=LP088_RS02525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02525;old_locus_tag=LP088_02520 NZ_CP087814.1 GeneMarkS-2+ CDS 484261 484485 . + 0 ID=cds-WP_078274935.1;Parent=gene-LP088_RS02525;Dbxref=Genbank:WP_078274935.1;Name=WP_078274935.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS02525;product=DUF2190 family protein;protein_id=WP_078274935.1;transl_table=11 NZ_CP087814.1 RefSeq gene 484580 484858 . + . ID=gene-LP088_RS02530;Name=LP088_RS02530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02530;old_locus_tag=LP088_02525 NZ_CP087814.1 GeneMarkS-2+ CDS 484580 484858 . + 0 ID=cds-WP_162860347.1;Parent=gene-LP088_RS02530;Dbxref=Genbank:WP_162860347.1;Name=WP_162860347.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS02530;product=hypothetical protein;protein_id=WP_162860347.1;transl_table=11 NZ_CP087814.1 RefSeq gene 484875 485882 . + . ID=gene-LP088_RS02535;Name=LP088_RS02535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02535;old_locus_tag=LP088_02530 NZ_CP087814.1 GeneMarkS-2+ CDS 484875 485882 . + 0 ID=cds-WP_078273404.1;Parent=gene-LP088_RS02535;Dbxref=Genbank:WP_078273404.1;Name=WP_078273404.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS02535;product=WG repeat-containing protein;protein_id=WP_078273404.1;transl_table=11 NZ_CP087814.1 RefSeq gene 485884 486657 . - . ID=gene-LP088_RS02540;Name=LP088_RS02540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02540;old_locus_tag=LP088_02535 NZ_CP087814.1 Protein Homology CDS 485884 486657 . - 0 ID=cds-WP_112742782.1;Parent=gene-LP088_RS02540;Dbxref=Genbank:WP_112742782.1;Name=WP_112742782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201754.1;locus_tag=LP088_RS02540;product=1-acyl-sn-glycerol-3-phosphate acyltransferase;protein_id=WP_112742782.1;transl_table=11 NZ_CP087814.1 RefSeq gene 486775 488670 . - . ID=gene-LP088_RS02545;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=LP088_RS02545;old_locus_tag=LP088_02540 NZ_CP087814.1 Protein Homology CDS 486775 488670 . - 0 ID=cds-WP_208624073.1;Parent=gene-LP088_RS02545;Dbxref=Genbank:WP_208624073.1;Name=WP_208624073.1;Ontology_term=GO:0006508,GO:0051301,GO:0004222,GO:0016887;gbkey=CDS;gene=ftsH;go_function=metalloendopeptidase activity|0004222||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003673631.1;locus_tag=LP088_RS02545;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_208624073.1;transl_table=11 NZ_CP087814.1 RefSeq gene 488819 489451 . - . ID=gene-LP088_RS02550;Name=LP088_RS02550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02550;old_locus_tag=LP088_02545 NZ_CP087814.1 Protein Homology CDS 488819 489451 . - 0 ID=cds-WP_078273401.1;Parent=gene-LP088_RS02550;Dbxref=Genbank:WP_078273401.1;Name=WP_078273401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003659062.1;locus_tag=LP088_RS02550;product=RlmE family RNA methyltransferase;protein_id=WP_078273401.1;transl_table=11 NZ_CP087814.1 RefSeq gene 489568 489897 . + . ID=gene-LP088_RS02555;Name=LP088_RS02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02555;old_locus_tag=LP088_02550 NZ_CP087814.1 Protein Homology CDS 489568 489897 . + 0 ID=cds-WP_078273400.1;Parent=gene-LP088_RS02555;Dbxref=Genbank:WP_078273400.1;Name=WP_078273400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019671739.1;locus_tag=LP088_RS02555;product=YhbY family RNA-binding protein;protein_id=WP_078273400.1;transl_table=11 NZ_CP087814.1 RefSeq gene 489920 490570 . + . ID=gene-LP088_RS02560;Name=LP088_RS02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02560;old_locus_tag=LP088_02555 NZ_CP087814.1 GeneMarkS-2+ CDS 489920 490570 . + 0 ID=cds-WP_078273399.1;Parent=gene-LP088_RS02560;Dbxref=Genbank:WP_078273399.1;Name=WP_078273399.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS02560;product=hypothetical protein;protein_id=WP_078273399.1;transl_table=11 NZ_CP087814.1 RefSeq gene 490709 491287 . - . ID=gene-LP088_RS02565;Name=LP088_RS02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02565;old_locus_tag=LP088_02560 NZ_CP087814.1 Protein Homology CDS 490709 491287 . - 0 ID=cds-WP_078273397.1;Parent=gene-LP088_RS02565;Dbxref=Genbank:WP_078273397.1;Name=WP_078273397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003659160.1;locus_tag=LP088_RS02565;product=sel1 repeat family protein;protein_id=WP_078273397.1;transl_table=11 NZ_CP087814.1 RefSeq gene 491634 492251 . - . ID=gene-LP088_RS02570;Name=metW;gbkey=Gene;gene=metW;gene_biotype=protein_coding;locus_tag=LP088_RS02570;old_locus_tag=LP088_02565 NZ_CP087814.1 Protein Homology CDS 491634 492251 . - 0 ID=cds-WP_112741852.1;Parent=gene-LP088_RS02570;Dbxref=Genbank:WP_112741852.1;Name=WP_112741852.1;Ontology_term=GO:0009086;gbkey=CDS;gene=metW;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009501427.1;locus_tag=LP088_RS02570;product=methionine biosynthesis protein MetW;protein_id=WP_112741852.1;transl_table=11 NZ_CP087814.1 RefSeq gene 492265 493497 . - . ID=gene-LP088_RS02575;Name=LP088_RS02575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02575;old_locus_tag=LP088_02570 NZ_CP087814.1 Protein Homology CDS 492265 493497 . - 0 ID=cds-WP_264676103.1;Parent=gene-LP088_RS02575;Dbxref=Genbank:WP_264676103.1;Name=WP_264676103.1;Ontology_term=GO:0009058,GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003659166.1;locus_tag=LP088_RS02575;product=homoserine O-acetyltransferase;protein_id=WP_264676103.1;transl_table=11 NZ_CP087814.1 RefSeq gene 493667 495067 . - . ID=gene-LP088_RS02580;Name=LP088_RS02580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02580;old_locus_tag=LP088_02575 NZ_CP087814.1 Protein Homology CDS 493667 495067 . - 0 ID=cds-WP_264676104.1;Parent=gene-LP088_RS02580;Dbxref=Genbank:WP_264676104.1;Name=WP_264676104.1;Ontology_term=GO:0006855,GO:0009410,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA,response to xenobiotic stimulus|0009410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003656929.1;locus_tag=LP088_RS02580;product=MATE family efflux transporter;protein_id=WP_264676104.1;transl_table=11 NZ_CP087814.1 RefSeq gene 495471 496997 . - . ID=gene-LP088_RS02585;Name=LP088_RS02585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02585;old_locus_tag=LP088_02580 NZ_CP087814.1 Protein Homology CDS 495471 496997 . - 0 ID=cds-WP_264676105.1;Parent=gene-LP088_RS02585;Dbxref=Genbank:WP_264676105.1;Name=WP_264676105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019383997.1;locus_tag=LP088_RS02585;product=alanine:cation symporter family protein;protein_id=WP_264676105.1;transl_table=11 NZ_CP087814.1 RefSeq gene 497513 498148 . + . ID=gene-LP088_RS02590;Name=LP088_RS02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02590;old_locus_tag=LP088_02585 NZ_CP087814.1 Protein Homology CDS 497513 498148 . + 0 ID=cds-WP_078273392.1;Parent=gene-LP088_RS02590;Dbxref=Genbank:WP_078273392.1;Name=WP_078273392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196576.1;locus_tag=LP088_RS02590;product=LemA family protein;protein_id=WP_078273392.1;transl_table=11 NZ_CP087814.1 RefSeq gene 498235 499347 . + . ID=gene-LP088_RS02595;Name=LP088_RS02595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02595;old_locus_tag=LP088_02590 NZ_CP087814.1 Protein Homology CDS 498235 499347 . + 0 ID=cds-WP_264676106.1;Parent=gene-LP088_RS02595;Dbxref=Genbank:WP_264676106.1;Name=WP_264676106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512822.1;locus_tag=LP088_RS02595;product=TPM domain-containing protein;protein_id=WP_264676106.1;transl_table=11 NZ_CP087814.1 RefSeq gene 499372 499884 . + . ID=gene-LP088_RS02600;Name=LP088_RS02600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02600;old_locus_tag=LP088_02595 NZ_CP087814.1 Protein Homology CDS 499372 499884 . + 0 ID=cds-WP_078273390.1;Parent=gene-LP088_RS02600;Dbxref=Genbank:WP_078273390.1;Name=WP_078273390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003663260.1;locus_tag=LP088_RS02600;product=TPM domain-containing protein;protein_id=WP_078273390.1;transl_table=11 NZ_CP087814.1 RefSeq gene 499891 500229 . + . ID=gene-LP088_RS02605;Name=LP088_RS02605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02605;old_locus_tag=LP088_02600 NZ_CP087814.1 GeneMarkS-2+ CDS 499891 500229 . + 0 ID=cds-WP_078273389.1;Parent=gene-LP088_RS02605;Dbxref=Genbank:WP_078273389.1;Name=WP_078273389.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS02605;product=hypothetical protein;protein_id=WP_078273389.1;transl_table=11 NZ_CP087814.1 RefSeq gene 500802 501614 . - . ID=gene-LP088_RS02610;Name=LP088_RS02610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02610;old_locus_tag=LP088_02605 NZ_CP087814.1 Protein Homology CDS 500802 501614 . - 0 ID=cds-WP_078273387.1;Parent=gene-LP088_RS02610;Dbxref=Genbank:WP_078273387.1;Name=WP_078273387.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520026.1;locus_tag=LP088_RS02610;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_078273387.1;transl_table=11 NZ_CP087814.1 RefSeq gene 501721 501996 . + . ID=gene-LP088_RS02615;Name=LP088_RS02615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02615;old_locus_tag=LP088_02610 NZ_CP087814.1 Protein Homology CDS 501721 501996 . + 0 ID=cds-WP_078273386.1;Parent=gene-LP088_RS02615;Dbxref=Genbank:WP_078273386.1;Name=WP_078273386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444180.1;locus_tag=LP088_RS02615;product=succinate dehydrogenase assembly factor 2;protein_id=WP_078273386.1;transl_table=11 NZ_CP087814.1 RefSeq gene 501996 502400 . + . ID=gene-LP088_RS02620;Name=LP088_RS02620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02620;old_locus_tag=LP088_02615 NZ_CP087814.1 GeneMarkS-2+ CDS 501996 502400 . + 0 ID=cds-WP_078273385.1;Parent=gene-LP088_RS02620;Dbxref=Genbank:WP_078273385.1;Name=WP_078273385.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS02620;product=hypothetical protein;protein_id=WP_078273385.1;transl_table=11 NZ_CP087814.1 RefSeq gene 502410 503855 . + . ID=gene-LP088_RS02625;Name=LP088_RS02625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02625;old_locus_tag=LP088_02620 NZ_CP087814.1 Protein Homology CDS 502410 503855 . + 0 ID=cds-WP_264676107.1;Parent=gene-LP088_RS02625;Dbxref=Genbank:WP_264676107.1;Name=WP_264676107.1;Ontology_term=GO:0052855;gbkey=CDS;go_function=ADP-dependent NAD(P)H-hydrate dehydratase activity|0052855||IEA;inference=COORDINATES: protein motif:HMM:TIGR00196.1;locus_tag=LP088_RS02625;product=NAD(P)H-hydrate dehydratase;protein_id=WP_264676107.1;transl_table=11 NZ_CP087814.1 RefSeq gene 504412 506049 . - . ID=gene-LP088_RS02630;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=LP088_RS02630;old_locus_tag=LP088_02625 NZ_CP087814.1 Protein Homology CDS 504412 506049 . - 0 ID=cds-WP_078273383.1;Parent=gene-LP088_RS02630;Dbxref=Genbank:WP_078273383.1;Name=WP_078273383.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0006457,GO:0005515,GO:0016887;gbkey=CDS;gene=groL;go_function=protein binding|0005515||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011959918.1;locus_tag=LP088_RS02630;product=chaperonin GroEL;protein_id=WP_078273383.1;transl_table=11 NZ_CP087814.1 RefSeq gene 506250 506552 . - . ID=gene-LP088_RS02635;Name=LP088_RS02635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02635;old_locus_tag=LP088_02630 NZ_CP087814.1 Protein Homology CDS 506250 506552 . - 0 ID=cds-WP_078273382.1;Parent=gene-LP088_RS02635;Dbxref=Genbank:WP_078273382.1;Name=WP_078273382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007393998.1;locus_tag=LP088_RS02635;product=co-chaperone GroES;protein_id=WP_078273382.1;transl_table=11 NZ_CP087814.1 RefSeq gene 506654 508129 . - . ID=gene-LP088_RS02640;Name=LP088_RS02640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02640;old_locus_tag=LP088_02635 NZ_CP087814.1 Protein Homology CDS 506654 508129 . - 0 ID=cds-WP_078273381.1;Parent=gene-LP088_RS02640;Dbxref=Genbank:WP_078273381.1;Name=WP_078273381.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012770.2;locus_tag=LP088_RS02640;product=alpha/beta fold hydrolase;protein_id=WP_078273381.1;transl_table=11 NZ_CP087814.1 RefSeq gene 508357 509061 . + . ID=gene-LP088_RS02645;Name=LP088_RS02645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02645;old_locus_tag=LP088_02640 NZ_CP087814.1 Protein Homology CDS 508357 509061 . + 0 ID=cds-WP_228157770.1;Parent=gene-LP088_RS02645;Dbxref=Genbank:WP_228157770.1;Name=WP_228157770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011959913.1;locus_tag=LP088_RS02645;product=DUF3108 domain-containing protein;protein_id=WP_228157770.1;transl_table=11 NZ_CP087814.1 RefSeq gene 509187 509930 . + . ID=gene-LP088_RS02650;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=LP088_RS02650;old_locus_tag=LP088_02645 NZ_CP087814.1 Protein Homology CDS 509187 509930 . + 0 ID=cds-WP_029102573.1;Parent=gene-LP088_RS02650;Dbxref=Genbank:WP_029102573.1;Name=WP_029102573.1;Ontology_term=GO:0015949,GO:0033862;gbkey=CDS;gene=pyrH;go_function=UMP kinase activity|0033862||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004751913.1;locus_tag=LP088_RS02650;product=UMP kinase;protein_id=WP_029102573.1;transl_table=11 NZ_CP087814.1 RefSeq gene 510068 510622 . + . ID=gene-LP088_RS02655;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=LP088_RS02655;old_locus_tag=LP088_02650 NZ_CP087814.1 Protein Homology CDS 510068 510622 . + 0 ID=cds-WP_029102574.1;Parent=gene-LP088_RS02655;Dbxref=Genbank:WP_029102574.1;Name=WP_029102574.1;Ontology_term=GO:0006412,GO:0008135,GO:0005737;gbkey=CDS;gene=frr;go_component=cytoplasm|0005737||IEA;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018679060.1;locus_tag=LP088_RS02655;product=ribosome recycling factor;protein_id=WP_029102574.1;transl_table=11 NZ_CP087814.1 RefSeq gene 510699 511448 . + . ID=gene-LP088_RS02660;Name=uppS;gbkey=Gene;gene=uppS;gene_biotype=protein_coding;locus_tag=LP088_RS02660;old_locus_tag=LP088_02655 NZ_CP087814.1 Protein Homology CDS 510699 511448 . + 0 ID=cds-WP_112741854.1;Parent=gene-LP088_RS02660;Dbxref=Genbank:WP_112741854.1;Name=WP_112741854.1;Ontology_term=GO:0009252,GO:0005737;gbkey=CDS;gene=uppS;go_component=cytoplasm|0005737||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007395452.1;locus_tag=LP088_RS02660;product=polyprenyl diphosphate synthase;protein_id=WP_112741854.1;transl_table=11 NZ_CP087814.1 RefSeq gene 511470 511814 . + . ID=gene-LP088_RS02665;Name=LP088_RS02665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02665;old_locus_tag=LP088_02660 NZ_CP087814.1 GeneMarkS-2+ CDS 511470 511814 . + 0 ID=cds-WP_078275407.1;Parent=gene-LP088_RS02665;Dbxref=Genbank:WP_078275407.1;Name=WP_078275407.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS02665;product=hypothetical protein;protein_id=WP_078275407.1;transl_table=11 NZ_CP087814.1 RefSeq gene 511860 512153 . + . ID=gene-LP088_RS02670;Name=LP088_RS02670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02670;old_locus_tag=LP088_02665 NZ_CP087814.1 GeneMarkS-2+ CDS 511860 512153 . + 0 ID=cds-WP_112741855.1;Parent=gene-LP088_RS02670;Dbxref=Genbank:WP_112741855.1;Name=WP_112741855.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS02670;product=hypothetical protein;protein_id=WP_112741855.1;transl_table=11 NZ_CP087814.1 RefSeq gene 512232 512570 . + . ID=gene-LP088_RS02675;Name=LP088_RS02675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02675;old_locus_tag=LP088_02670 NZ_CP087814.1 GeneMarkS-2+ CDS 512232 512570 . + 0 ID=cds-WP_112741856.1;Parent=gene-LP088_RS02675;Dbxref=Genbank:WP_112741856.1;Name=WP_112741856.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS02675;product=hypothetical protein;protein_id=WP_112741856.1;transl_table=11 NZ_CP087814.1 RefSeq gene 512690 513520 . + . ID=gene-LP088_RS02680;Name=LP088_RS02680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02680;old_locus_tag=LP088_02675 NZ_CP087814.1 Protein Homology CDS 512690 513520 . + 0 ID=cds-WP_112741857.1;Parent=gene-LP088_RS02680;Dbxref=Genbank:WP_112741857.1;Name=WP_112741857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019518620.1;locus_tag=LP088_RS02680;product=phosphatidate cytidylyltransferase;protein_id=WP_112741857.1;transl_table=11 NZ_CP087814.1 RefSeq gene 513520 514734 . + . ID=gene-LP088_RS02685;Name=dxr;gbkey=Gene;gene=dxr;gene_biotype=protein_coding;locus_tag=LP088_RS02685;old_locus_tag=LP088_02680 NZ_CP087814.1 Protein Homology CDS 513520 514734 . + 0 ID=cds-WP_112741858.1;Parent=gene-LP088_RS02685;Dbxref=Genbank:WP_112741858.1;Name=WP_112741858.1;Ontology_term=GO:0019288,GO:0030604,GO:0005737;gbkey=CDS;gene=dxr;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019518866.1;locus_tag=LP088_RS02685;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WP_112741858.1;transl_table=11 NZ_CP087814.1 RefSeq gene 514919 516271 . + . ID=gene-LP088_RS02690;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=LP088_RS02690;old_locus_tag=LP088_02685 NZ_CP087814.1 Protein Homology CDS 514919 516271 . + 0 ID=cds-WP_112741859.1;Parent=gene-LP088_RS02690;Dbxref=Genbank:WP_112741859.1;Name=WP_112741859.1;Ontology_term=GO:0006508,GO:0004222,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003673674.1;locus_tag=LP088_RS02690;product=RIP metalloprotease RseP;protein_id=WP_112741859.1;transl_table=11 NZ_CP087814.1 RefSeq gene 516480 518876 . + . ID=gene-LP088_RS02695;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=LP088_RS02695;old_locus_tag=LP088_02690 NZ_CP087814.1 Protein Homology CDS 516480 518876 . + 0 ID=cds-WP_078274905.1;Parent=gene-LP088_RS02695;Dbxref=Genbank:WP_078274905.1;Name=WP_078274905.1;Ontology_term=GO:0009279;gbkey=CDS;gene=bamA;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514033.1;locus_tag=LP088_RS02695;product=outer membrane protein assembly factor BamA;protein_id=WP_078274905.1;transl_table=11 NZ_CP087814.1 RefSeq gene 518879 519838 . + . ID=gene-LP088_RS02700;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=LP088_RS02700;old_locus_tag=LP088_02695 NZ_CP087814.1 Protein Homology CDS 518879 519838 . + 0 ID=cds-WP_078274906.1;Parent=gene-LP088_RS02700;Dbxref=Genbank:WP_078274906.1;Name=WP_078274906.1;Ontology_term=GO:0009245,GO:0016410;gbkey=CDS;gene=lpxD;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003659221.1;locus_tag=LP088_RS02700;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WP_078274906.1;transl_table=11 NZ_CP087814.1 RefSeq gene 519861 520379 . + . ID=gene-LP088_RS02705;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=LP088_RS02705;old_locus_tag=LP088_02700 NZ_CP087814.1 Protein Homology CDS 519861 520379 . + 0 ID=cds-WP_078274907.1;Parent=gene-LP088_RS02705;Dbxref=Genbank:WP_078274907.1;Name=WP_078274907.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003659222.1;locus_tag=LP088_RS02705;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_078274907.1;transl_table=11 NZ_CP087814.1 RefSeq gene 520392 521165 . + . ID=gene-LP088_RS02710;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=LP088_RS02710;old_locus_tag=LP088_02705 NZ_CP087814.1 Protein Homology CDS 520392 521165 . + 0 ID=cds-WP_078274908.1;Parent=gene-LP088_RS02710;Dbxref=Genbank:WP_078274908.1;Name=WP_078274908.1;Ontology_term=GO:0008610,GO:0008780;gbkey=CDS;gene=lpxA;go_function=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity|0008780||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013107780.1;locus_tag=LP088_RS02710;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=WP_078274908.1;transl_table=11 NZ_CP087814.1 RefSeq gene 521369 522883 . + . ID=gene-LP088_RS02715;Name=LP088_RS02715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02715;old_locus_tag=LP088_02710 NZ_CP087814.1 Protein Homology CDS 521369 522883 . + 0 ID=cds-WP_078274909.1;Parent=gene-LP088_RS02715;Dbxref=Genbank:WP_078274909.1;Name=WP_078274909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004460575.1;locus_tag=LP088_RS02715;product=sodium-dependent transporter;protein_id=WP_078274909.1;transl_table=11 NZ_CP087814.1 RefSeq gene 522880 523008 . + . ID=gene-LP088_RS02720;Name=LP088_RS02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02720;old_locus_tag=LP088_02715 NZ_CP087814.1 Protein Homology CDS 522880 523008 . + 0 ID=cds-WP_078274910.1;Parent=gene-LP088_RS02720;Dbxref=Genbank:WP_078274910.1;Name=WP_078274910.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033493.0;locus_tag=LP088_RS02720;product=methionine/alanine import family NSS transporter small subunit;protein_id=WP_078274910.1;transl_table=11 NZ_CP087814.1 RefSeq gene 523268 523891 . - . ID=gene-LP088_RS02725;Name=nfuA;gbkey=Gene;gene=nfuA;gene_biotype=protein_coding;locus_tag=LP088_RS02725;old_locus_tag=LP088_02720 NZ_CP087814.1 Protein Homology CDS 523268 523891 . - 0 ID=cds-WP_029102586.1;Parent=gene-LP088_RS02725;Dbxref=Genbank:WP_029102586.1;Name=WP_029102586.1;Ontology_term=GO:0016226,GO:0003674;gbkey=CDS;gene=nfuA;go_function=molecular_function|0003674||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007115071.1;locus_tag=LP088_RS02725;product=Fe-S biogenesis protein NfuA;protein_id=WP_029102586.1;transl_table=11 NZ_CP087814.1 RefSeq gene 523984 525000 . + . ID=gene-LP088_RS02730;Name=LP088_RS02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02730;old_locus_tag=LP088_02725 NZ_CP087814.1 Protein Homology CDS 523984 525000 . + 0 ID=cds-WP_112741861.1;Parent=gene-LP088_RS02730;Dbxref=Genbank:WP_112741861.1;Name=WP_112741861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004463456.1;locus_tag=LP088_RS02730;product=bifunctional nicotinamide-nucleotide adenylyltransferase/Nudix hydroxylase;protein_id=WP_112741861.1;transl_table=11 NZ_CP087814.1 RefSeq gene 525011 526000 . + . ID=gene-LP088_RS02735;Name=LP088_RS02735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02735;old_locus_tag=LP088_02730 NZ_CP087814.1 GeneMarkS-2+ CDS 525011 526000 . + 0 ID=cds-WP_078274912.1;Parent=gene-LP088_RS02735;Dbxref=Genbank:WP_078274912.1;Name=WP_078274912.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS02735;product=hypothetical protein;protein_id=WP_078274912.1;transl_table=11 NZ_CP087814.1 RefSeq gene 526122 526197 . - . ID=gene-LP088_RS02740;Name=LP088_RS02740;gbkey=Gene;gene_biotype=tRNA;locus_tag=LP088_RS02740;old_locus_tag=LP088_02735 NZ_CP087814.1 tRNAscan-SE tRNA 526122 526197 . - . ID=rna-LP088_RS02740;Parent=gene-LP088_RS02740;anticodon=(pos:complement(526162..526164));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS02740;product=tRNA-Asn NZ_CP087814.1 tRNAscan-SE exon 526122 526197 . - . ID=exon-LP088_RS02740-1;Parent=rna-LP088_RS02740;anticodon=(pos:complement(526162..526164));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS02740;product=tRNA-Asn NZ_CP087814.1 RefSeq gene 526334 526524 . - . ID=gene-LP088_RS02745;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=LP088_RS02745;old_locus_tag=LP088_02740 NZ_CP087814.1 cmsearch ncRNA 526334 526524 . - . ID=rna-LP088_RS02745;Parent=gene-LP088_RS02745;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LP088_RS02745;product=6S RNA NZ_CP087814.1 cmsearch exon 526334 526524 . - . ID=exon-LP088_RS02745-1;Parent=rna-LP088_RS02745;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LP088_RS02745;product=6S RNA NZ_CP087814.1 RefSeq gene 526646 528202 . + . ID=gene-LP088_RS02750;Name=gpmI;gbkey=Gene;gene=gpmI;gene_biotype=protein_coding;locus_tag=LP088_RS02750;old_locus_tag=LP088_02745 NZ_CP087814.1 Protein Homology CDS 526646 528202 . + 0 ID=cds-WP_078274913.1;Parent=gene-LP088_RS02750;Dbxref=Genbank:WP_078274913.1;Name=WP_078274913.1;Ontology_term=GO:0006096,GO:0046537;gbkey=CDS;gene=gpmI;go_function=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase activity|0046537||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009501899.1;locus_tag=LP088_RS02750;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WP_078274913.1;transl_table=11 NZ_CP087814.1 RefSeq gene 528199 529596 . + . ID=gene-LP088_RS02755;Name=LP088_RS02755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02755;old_locus_tag=LP088_02750 NZ_CP087814.1 Protein Homology CDS 528199 529596 . + 0 ID=cds-WP_228157773.1;Parent=gene-LP088_RS02755;Dbxref=Genbank:WP_228157773.1;Name=WP_228157773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003659915.1;locus_tag=LP088_RS02755;product=S41 family peptidase;protein_id=WP_228157773.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 530244 530959 . - . ID=gene-LP088_RS02760;Name=LP088_RS02760;end_range=530959,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS02760;old_locus_tag=LP088_02755;partial=true;pseudo=true;start_range=.,530244 NZ_CP087814.1 Protein Homology CDS 530244 530959 . - 0 ID=cds-LP088_RS02760;Parent=gene-LP088_RS02760;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=530959,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003094694.1;locus_tag=LP088_RS02760;partial=true;product=sigma-54 dependent transcriptional regulator;pseudo=true;start_range=.,530244;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 531251 531580 . - . ID=gene-LP088_RS02765;Name=LP088_RS02765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS02765;partial=true;pseudo=true;start_range=.,531251 NZ_CP087814.1 Protein Homology CDS 531251 531580 . - 0 ID=cds-LP088_RS02765;Parent=gene-LP088_RS02765;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: protein motif:HMM:NF012301.2;locus_tag=LP088_RS02765;partial=true;product=response regulator;pseudo=true;start_range=.,531251;transl_table=11 NZ_CP087814.1 RefSeq gene 531711 533426 . - . ID=gene-LP088_RS02770;Name=LP088_RS02770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02770;old_locus_tag=LP088_02765 NZ_CP087814.1 Protein Homology CDS 531711 533426 . - 0 ID=cds-WP_264676110.1;Parent=gene-LP088_RS02770;Dbxref=Genbank:WP_264676110.1;Name=WP_264676110.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014567.2;locus_tag=LP088_RS02770;product=PAS domain-containing sensor histidine kinase;protein_id=WP_264676110.1;transl_table=11 NZ_CP087814.1 RefSeq gene 533423 534058 . - . ID=gene-LP088_RS02775;Name=LP088_RS02775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02775;old_locus_tag=LP088_02770 NZ_CP087814.1 Protein Homology CDS 533423 534058 . - 0 ID=cds-WP_078274916.1;Parent=gene-LP088_RS02775;Dbxref=Genbank:WP_078274916.1;Name=WP_078274916.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657958.1;locus_tag=LP088_RS02775;product=response regulator;protein_id=WP_078274916.1;transl_table=11 NZ_CP087814.1 RefSeq gene 534663 535736 . + . ID=gene-LP088_RS02780;Name=LP088_RS02780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02780;old_locus_tag=LP088_02775 NZ_CP087814.1 Protein Homology CDS 534663 535736 . + 0 ID=cds-WP_078274922.1;Parent=gene-LP088_RS02780;Dbxref=Genbank:WP_078274922.1;Name=WP_078274922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019673013.1;locus_tag=LP088_RS02780;product=serine hydrolase;protein_id=WP_078274922.1;transl_table=11 NZ_CP087814.1 RefSeq gene 535995 536639 . + . ID=gene-LP088_RS02785;Name=LP088_RS02785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02785;old_locus_tag=LP088_02780 NZ_CP087814.1 Protein Homology CDS 535995 536639 . + 0 ID=cds-WP_112741863.1;Parent=gene-LP088_RS02785;Dbxref=Genbank:WP_112741863.1;Name=WP_112741863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003669604.1;locus_tag=LP088_RS02785;product=thiamine phosphate synthase;protein_id=WP_112741863.1;transl_table=11 NZ_CP087814.1 RefSeq gene 536774 537973 . + . ID=gene-LP088_RS02790;Name=LP088_RS02790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02790;old_locus_tag=LP088_02785 NZ_CP087814.1 Protein Homology CDS 536774 537973 . + 0 ID=cds-WP_264690410.1;Parent=gene-LP088_RS02790;Dbxref=Genbank:WP_264690410.1;Name=WP_264690410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513031.1;locus_tag=LP088_RS02790;product=phosphoglycerate kinase;protein_id=WP_264690410.1;transl_table=11 NZ_CP087814.1 RefSeq gene 538177 538563 . + . ID=gene-LP088_RS02795;Name=LP088_RS02795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02795;old_locus_tag=LP088_02790 NZ_CP087814.1 GeneMarkS-2+ CDS 538177 538563 . + 0 ID=cds-WP_264676112.1;Parent=gene-LP088_RS02795;Dbxref=Genbank:WP_264676112.1;Name=WP_264676112.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS02795;product=hypothetical protein;protein_id=WP_264676112.1;transl_table=11 NZ_CP087814.1 RefSeq gene 539193 539672 . + . ID=gene-LP088_RS02800;Name=LP088_RS02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02800;old_locus_tag=LP088_02795 NZ_CP087814.1 Protein Homology CDS 539193 539672 . + 0 ID=cds-WP_264682783.1;Parent=gene-LP088_RS02800;Dbxref=Genbank:WP_264682783.1;Name=WP_264682783.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_180375739.1;locus_tag=LP088_RS02800;product=pilin;protein_id=WP_264682783.1;transl_table=11 NZ_CP087814.1 RefSeq gene 539858 540643 . + . ID=gene-LP088_RS02805;Name=LP088_RS02805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02805;old_locus_tag=LP088_02800 NZ_CP087814.1 GeneMarkS-2+ CDS 539858 540643 . + 0 ID=cds-WP_264683011.1;Parent=gene-LP088_RS02805;Dbxref=Genbank:WP_264683011.1;Name=WP_264683011.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS02805;product=hypothetical protein;protein_id=WP_264683011.1;transl_table=11 NZ_CP087814.1 RefSeq gene 540978 541400 . - . ID=gene-LP088_RS02810;Name=LP088_RS02810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02810;old_locus_tag=LP088_02805 NZ_CP087814.1 Protein Homology CDS 540978 541400 . - 0 ID=cds-WP_264676325.1;Parent=gene-LP088_RS02810;Dbxref=Genbank:WP_264676325.1;Name=WP_264676325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_180375739.1;locus_tag=LP088_RS02810;product=pilin;protein_id=WP_264676325.1;transl_table=11 NZ_CP087814.1 RefSeq gene 541397 542365 . - . ID=gene-LP088_RS02815;Name=piv;gbkey=Gene;gene=piv;gene_biotype=protein_coding;locus_tag=LP088_RS02815;old_locus_tag=LP088_02810 NZ_CP087814.1 Protein Homology CDS 541397 542365 . - 0 ID=cds-WP_264676116.1;Parent=gene-LP088_RS02815;Dbxref=Genbank:WP_264676116.1;Name=WP_264676116.1;gbkey=CDS;gene=piv;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611961.1;locus_tag=LP088_RS02815;product=IS110 element transposase-like pilin switch DNA invertase Piv;protein_id=WP_264676116.1;transl_table=11 NZ_CP087814.1 RefSeq gene 542527 543966 . + . ID=gene-LP088_RS02820;Name=LP088_RS02820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02820;old_locus_tag=LP088_02815 NZ_CP087814.1 GeneMarkS-2+ CDS 542527 543966 . + 0 ID=cds-WP_264676117.1;Parent=gene-LP088_RS02820;Dbxref=Genbank:WP_264676117.1;Name=WP_264676117.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS02820;product=hypothetical protein;protein_id=WP_264676117.1;transl_table=11 NZ_CP087814.1 RefSeq gene 543969 544661 . - . ID=gene-LP088_RS02825;Name=LP088_RS02825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02825;old_locus_tag=LP088_02820 NZ_CP087814.1 GeneMarkS-2+ CDS 543969 544661 . - 0 ID=cds-WP_264676118.1;Parent=gene-LP088_RS02825;Dbxref=Genbank:WP_264676118.1;Name=WP_264676118.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS02825;product=hypothetical protein;protein_id=WP_264676118.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 544727 544855 . + . ID=gene-LP088_RS02830;Name=LP088_RS02830;end_range=544855,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS02830;old_locus_tag=LP088_02825;partial=true;pseudo=true NZ_CP087814.1 Protein Homology CDS 544727 544855 . + 0 ID=cds-LP088_RS02830;Parent=gene-LP088_RS02830;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=544855,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005201330.1;locus_tag=LP088_RS02830;partial=true;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;pseudo=true;transl_table=11 NZ_CP087814.1 RefSeq gene 544853 545203 . + . ID=gene-LP088_RS02835;Name=LP088_RS02835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02835;old_locus_tag=LP088_02830 NZ_CP087814.1 Protein Homology CDS 544853 545203 . + 0 ID=cds-WP_264676326.1;Parent=gene-LP088_RS02835;Dbxref=Genbank:WP_264676326.1;Name=WP_264676326.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012342.2;locus_tag=LP088_RS02835;product=pilin;protein_id=WP_264676326.1;transl_table=11 NZ_CP087814.1 RefSeq gene 545259 546485 . - . ID=gene-LP088_RS02840;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=LP088_RS02840;old_locus_tag=LP088_02835 NZ_CP087814.1 Protein Homology CDS 545259 546485 . - 0 ID=cds-WP_264676119.1;Parent=gene-LP088_RS02840;Dbxref=Genbank:WP_264676119.1;Name=WP_264676119.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=serA;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003663188.1;locus_tag=LP088_RS02840;product=phosphoglycerate dehydrogenase;protein_id=WP_264676119.1;transl_table=11 NZ_CP087814.1 RefSeq gene 547078 548442 . + . ID=gene-LP088_RS02845;Name=LP088_RS02845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02845;old_locus_tag=LP088_02840 NZ_CP087814.1 Protein Homology CDS 547078 548442 . + 0 ID=cds-WP_264676120.1;Parent=gene-LP088_RS02845;Dbxref=Genbank:WP_264676120.1;Name=WP_264676120.1;Ontology_term=GO:0009058,GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005208276.1;locus_tag=LP088_RS02845;product=diaminobutyrate--2-oxoglutarate transaminase;protein_id=WP_264676120.1;transl_table=11 NZ_CP087814.1 RefSeq gene 548579 550534 . + . ID=gene-LP088_RS02850;Name=LP088_RS02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02850;old_locus_tag=LP088_02845 NZ_CP087814.1 Protein Homology CDS 548579 550534 . + 0 ID=cds-WP_264684085.1;Parent=gene-LP088_RS02850;Dbxref=Genbank:WP_264684085.1;Name=WP_264684085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004460724.1;locus_tag=LP088_RS02850;product=site-specific DNA-methyltransferase;protein_id=WP_264684085.1;transl_table=11 NZ_CP087814.1 RefSeq gene 550553 553186 . + . ID=gene-LP088_RS02855;Name=LP088_RS02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02855;old_locus_tag=LP088_02850 NZ_CP087814.1 Protein Homology CDS 550553 553186 . + 0 ID=cds-WP_112741873.1;Parent=gene-LP088_RS02855;Dbxref=Genbank:WP_112741873.1;Name=WP_112741873.1;Ontology_term=GO:0003677,GO:0005524,GO:0016787;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003660887.1;locus_tag=LP088_RS02855;product=DEAD/DEAH box helicase family protein;protein_id=WP_112741873.1;transl_table=11 NZ_CP087814.1 RefSeq gene 553271 554182 . + . ID=gene-LP088_RS02860;Name=LP088_RS02860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02860;old_locus_tag=LP088_02855 NZ_CP087814.1 Protein Homology CDS 553271 554182 . + 0 ID=cds-WP_078275357.1;Parent=gene-LP088_RS02860;Dbxref=Genbank:WP_078275357.1;Name=WP_078275357.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004282326.1;locus_tag=LP088_RS02860;product=IS982 family transposase;protein_id=WP_078275357.1;transl_table=11 NZ_CP087814.1 RefSeq gene 554254 555798 . + . ID=gene-LP088_RS02865;Name=LP088_RS02865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02865;old_locus_tag=LP088_02860 NZ_CP087814.1 Protein Homology CDS 554254 555798 . + 0 ID=cds-WP_078273819.1;Parent=gene-LP088_RS02865;Dbxref=Genbank:WP_078273819.1;Name=WP_078273819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005693296.1;locus_tag=LP088_RS02865;product=aspartate aminotransferase family protein;protein_id=WP_078273819.1;transl_table=11 NZ_CP087814.1 RefSeq gene 555909 556175 . - . ID=gene-LP088_RS02870;Name=LP088_RS02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02870;old_locus_tag=LP088_02865 NZ_CP087814.1 GeneMarkS-2+ CDS 555909 556175 . - 0 ID=cds-WP_264676123.1;Parent=gene-LP088_RS02870;Dbxref=Genbank:WP_264676123.1;Name=WP_264676123.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS02870;product=hypothetical protein;protein_id=WP_264676123.1;transl_table=11 NZ_CP087814.1 RefSeq gene 556156 556338 . - . ID=gene-LP088_RS02875;Name=LP088_RS02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02875;old_locus_tag=LP088_02870 NZ_CP087814.1 GeneMarkS-2+ CDS 556156 556338 . - 0 ID=cds-WP_143821666.1;Parent=gene-LP088_RS02875;Dbxref=Genbank:WP_143821666.1;Name=WP_143821666.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS02875;product=hypothetical protein;protein_id=WP_143821666.1;transl_table=11 NZ_CP087814.1 RefSeq gene 556439 557260 . + . ID=gene-LP088_RS02880;Name=LP088_RS02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02880;old_locus_tag=LP088_02875 NZ_CP087814.1 Protein Homology CDS 556439 557260 . + 0 ID=cds-WP_112741874.1;Parent=gene-LP088_RS02880;Dbxref=Genbank:WP_112741874.1;Name=WP_112741874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010200675.1;locus_tag=LP088_RS02880;product=DUF72 domain-containing protein;protein_id=WP_112741874.1;transl_table=11 NZ_CP087814.1 RefSeq gene 557722 557937 . + . ID=gene-LP088_RS02885;Name=LP088_RS02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02885;old_locus_tag=LP088_02880 NZ_CP087814.1 Protein Homology CDS 557722 557937 . + 0 ID=cds-WP_208624075.1;Parent=gene-LP088_RS02885;Dbxref=Genbank:WP_208624075.1;Name=WP_208624075.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024252.2;locus_tag=LP088_RS02885;product=helix-turn-helix domain-containing protein;protein_id=WP_208624075.1;transl_table=11 NZ_CP087814.1 RefSeq gene 558014 558748 . - . ID=gene-LP088_RS02890;Name=LP088_RS02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02890;old_locus_tag=LP088_02885 NZ_CP087814.1 Protein Homology CDS 558014 558748 . - 0 ID=cds-WP_078273822.1;Parent=gene-LP088_RS02890;Dbxref=Genbank:WP_078273822.1;Name=WP_078273822.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007395576.1;locus_tag=LP088_RS02890;product=TetR family transcriptional regulator;protein_id=WP_078273822.1;transl_table=11 NZ_CP087814.1 RefSeq gene 558947 560287 . - . ID=gene-LP088_RS02895;Name=LP088_RS02895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02895;old_locus_tag=LP088_02890 NZ_CP087814.1 Protein Homology CDS 558947 560287 . - 0 ID=cds-WP_078273823.1;Parent=gene-LP088_RS02895;Dbxref=Genbank:WP_078273823.1;Name=WP_078273823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019518686.1;locus_tag=LP088_RS02895;product=hypothetical protein;protein_id=WP_078273823.1;transl_table=11 NZ_CP087814.1 RefSeq gene 560322 560645 . - . ID=gene-LP088_RS02900;Name=LP088_RS02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02900;old_locus_tag=LP088_02895 NZ_CP087814.1 Protein Homology CDS 560322 560645 . - 0 ID=cds-WP_078273824.1;Parent=gene-LP088_RS02900;Dbxref=Genbank:WP_078273824.1;Name=WP_078273824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016138692.1;locus_tag=LP088_RS02900;product=ferredoxin family protein;protein_id=WP_078273824.1;transl_table=11 NZ_CP087814.1 RefSeq gene 561121 561609 . - . ID=gene-LP088_RS02905;Name=LP088_RS02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02905;old_locus_tag=LP088_02900 NZ_CP087814.1 Protein Homology CDS 561121 561609 . - 0 ID=cds-WP_112741875.1;Parent=gene-LP088_RS02905;Dbxref=Genbank:WP_112741875.1;Name=WP_112741875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009501691.1;locus_tag=LP088_RS02905;product=hypothetical protein;protein_id=WP_112741875.1;transl_table=11 NZ_CP087814.1 RefSeq gene 562054 563748 . + . ID=gene-LP088_RS02910;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=LP088_RS02910;old_locus_tag=LP088_02905 NZ_CP087814.1 Protein Homology CDS 562054 563748 . + 0 ID=cds-WP_078273831.1;Parent=gene-LP088_RS02910;Dbxref=Genbank:WP_078273831.1;Name=WP_078273831.1;Ontology_term=GO:0006310,GO:0008297;gbkey=CDS;gene=recJ;go_function=single-stranded DNA exodeoxyribonuclease activity|0008297||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003673585.1;locus_tag=LP088_RS02910;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_078273831.1;transl_table=11 NZ_CP087814.1 RefSeq gene 563786 564532 . - . ID=gene-LP088_RS02915;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=LP088_RS02915;old_locus_tag=LP088_02910 NZ_CP087814.1 Protein Homology CDS 563786 564532 . - 0 ID=cds-WP_078273826.1;Parent=gene-LP088_RS02915;Dbxref=Genbank:WP_078273826.1;Name=WP_078273826.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011960166.1;locus_tag=LP088_RS02915;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=WP_078273826.1;transl_table=11 NZ_CP087814.1 RefSeq gene 565025 565183 . + . ID=gene-LP088_RS02920;Name=LP088_RS02920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02920;old_locus_tag=LP088_02915 NZ_CP087814.1 GeneMarkS-2+ CDS 565025 565183 . + 0 ID=cds-WP_158079632.1;Parent=gene-LP088_RS02920;Dbxref=Genbank:WP_158079632.1;Name=WP_158079632.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS02920;product=hypothetical protein;protein_id=WP_158079632.1;transl_table=11 NZ_CP087814.1 RefSeq gene 565322 565861 . - . ID=gene-LP088_RS02925;Name=LP088_RS02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02925;old_locus_tag=LP088_02920 NZ_CP087814.1 GeneMarkS-2+ CDS 565322 565861 . - 0 ID=cds-WP_208624076.1;Parent=gene-LP088_RS02925;Dbxref=Genbank:WP_208624076.1;Name=WP_208624076.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS02925;product=hypothetical protein;protein_id=WP_208624076.1;transl_table=11 NZ_CP087814.1 RefSeq gene 565998 566816 . - . ID=gene-LP088_RS02930;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=LP088_RS02930;old_locus_tag=LP088_02925 NZ_CP087814.1 Protein Homology CDS 565998 566816 . - 0 ID=cds-WP_112741876.1;Parent=gene-LP088_RS02930;Dbxref=Genbank:WP_112741876.1;Name=WP_112741876.1;Ontology_term=GO:0009089,GO:0008666;gbkey=CDS;gene=dapD;go_function=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase activity|0008666||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657795.1;locus_tag=LP088_RS02930;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_112741876.1;transl_table=11 NZ_CP087814.1 RefSeq gene 566873 567835 . - . ID=gene-LP088_RS02935;Name=LP088_RS02935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02935;old_locus_tag=LP088_02930 NZ_CP087814.1 Protein Homology CDS 566873 567835 . - 0 ID=cds-WP_112741877.1;Parent=gene-LP088_RS02935;Dbxref=Genbank:WP_112741877.1;Name=WP_112741877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443028.1;locus_tag=LP088_RS02935;product=alpha/beta fold hydrolase;protein_id=WP_112741877.1;transl_table=11 NZ_CP087814.1 RefSeq gene 567920 568063 . + . ID=gene-LP088_RS02940;Name=LP088_RS02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02940;old_locus_tag=LP088_02935 NZ_CP087814.1 GeneMarkS-2+ CDS 567920 568063 . + 0 ID=cds-WP_158079633.1;Parent=gene-LP088_RS02940;Dbxref=Genbank:WP_158079633.1;Name=WP_158079633.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS02940;product=hypothetical protein;protein_id=WP_158079633.1;transl_table=11 NZ_CP087814.1 RefSeq gene 568942 569124 . + . ID=gene-LP088_RS02945;Name=LP088_RS02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02945;old_locus_tag=LP088_02940 NZ_CP087814.1 GeneMarkS-2+ CDS 568942 569124 . + 0 ID=cds-WP_162860348.1;Parent=gene-LP088_RS02945;Dbxref=Genbank:WP_162860348.1;Name=WP_162860348.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS02945;product=hypothetical protein;protein_id=WP_162860348.1;transl_table=11 NZ_CP087814.1 RefSeq gene 569342 570193 . - . ID=gene-LP088_RS02950;Name=LP088_RS02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02950;old_locus_tag=LP088_02945 NZ_CP087814.1 GeneMarkS-2+ CDS 569342 570193 . - 0 ID=cds-WP_264676124.1;Parent=gene-LP088_RS02950;Dbxref=Genbank:WP_264676124.1;Name=WP_264676124.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS02950;product=hypothetical protein;protein_id=WP_264676124.1;transl_table=11 NZ_CP087814.1 RefSeq gene 570153 571217 . - . ID=gene-LP088_RS02955;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=LP088_RS02955;old_locus_tag=LP088_02950 NZ_CP087814.1 Protein Homology CDS 570153 571217 . - 0 ID=cds-WP_112741881.1;Parent=gene-LP088_RS02955;Dbxref=Genbank:WP_112741881.1;Name=WP_112741881.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003672864.1;locus_tag=LP088_RS02955;product=lipoyl synthase;protein_id=WP_112741881.1;transl_table=11 NZ_CP087814.1 RefSeq gene 571380 571556 . + . ID=gene-LP088_RS02960;Name=LP088_RS02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02960;old_locus_tag=LP088_02955 NZ_CP087814.1 GeneMarkS-2+ CDS 571380 571556 . + 0 ID=cds-WP_162860350.1;Parent=gene-LP088_RS02960;Dbxref=Genbank:WP_162860350.1;Name=WP_162860350.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS02960;product=hypothetical protein;protein_id=WP_162860350.1;transl_table=11 NZ_CP087814.1 RefSeq gene 571569 572285 . + . ID=gene-LP088_RS02965;Name=LP088_RS02965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02965;old_locus_tag=LP088_02960 NZ_CP087814.1 Protein Homology CDS 571569 572285 . + 0 ID=cds-WP_112741882.1;Parent=gene-LP088_RS02965;Dbxref=Genbank:WP_112741882.1;Name=WP_112741882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019672852.1;locus_tag=LP088_RS02965;product=alpha-ketoglutarate-dependent dioxygenase AlkB;protein_id=WP_112741882.1;transl_table=11 NZ_CP087814.1 RefSeq gene 572544 575168 . + . ID=gene-LP088_RS02970;Name=LP088_RS02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02970;old_locus_tag=LP088_02965 NZ_CP087814.1 Protein Homology CDS 572544 575168 . + 0 ID=cds-WP_078273230.1;Parent=gene-LP088_RS02970;Dbxref=Genbank:WP_078273230.1;Name=WP_078273230.1;Ontology_term=GO:0006099,GO:0003994,GO:0051539;gbkey=CDS;go_function=aconitate hydratase activity|0003994||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016659080.1;locus_tag=LP088_RS02970;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=WP_078273230.1;transl_table=11 NZ_CP087814.1 RefSeq gene 575222 575812 . - . ID=gene-LP088_RS02975;Name=LP088_RS02975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02975;old_locus_tag=LP088_02970 NZ_CP087814.1 Protein Homology CDS 575222 575812 . - 0 ID=cds-WP_078273219.1;Parent=gene-LP088_RS02975;Dbxref=Genbank:WP_078273219.1;Name=WP_078273219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513418.1;locus_tag=LP088_RS02975;product=DedA family protein;protein_id=WP_078273219.1;transl_table=11 NZ_CP087814.1 RefSeq gene 575957 576451 . + . ID=gene-LP088_RS02980;Name=ribE;gbkey=Gene;gene=ribE;gene_biotype=protein_coding;locus_tag=LP088_RS02980;old_locus_tag=LP088_02975 NZ_CP087814.1 Protein Homology CDS 575957 576451 . + 0 ID=cds-WP_078273229.1;Parent=gene-LP088_RS02980;Dbxref=Genbank:WP_078273229.1;Name=WP_078273229.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribE;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003662899.1;locus_tag=LP088_RS02980;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_078273229.1;transl_table=11 NZ_CP087814.1 RefSeq gene 576629 577192 . + . ID=gene-LP088_RS02985;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=LP088_RS02985;old_locus_tag=LP088_02980 NZ_CP087814.1 Protein Homology CDS 576629 577192 . + 0 ID=cds-WP_264676125.1;Parent=gene-LP088_RS02985;Dbxref=Genbank:WP_264676125.1;Name=WP_264676125.1;Ontology_term=GO:0006355;gbkey=CDS;gene=nusB;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003662901.1;locus_tag=LP088_RS02985;product=transcription antitermination factor NusB;protein_id=WP_264676125.1;transl_table=11 NZ_CP087814.1 RefSeq gene 577248 578225 . + . ID=gene-LP088_RS02990;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=LP088_RS02990;old_locus_tag=LP088_02985 NZ_CP087814.1 Protein Homology CDS 577248 578225 . + 0 ID=cds-WP_078273217.1;Parent=gene-LP088_RS02990;Dbxref=Genbank:WP_078273217.1;Name=WP_078273217.1;Ontology_term=GO:0009228,GO:0009030;gbkey=CDS;gene=thiL;go_function=thiamine-phosphate kinase activity|0009030||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003671909.1;locus_tag=LP088_RS02990;product=thiamine-phosphate kinase;protein_id=WP_078273217.1;transl_table=11 NZ_CP087814.1 RefSeq gene 578257 578919 . + . ID=gene-LP088_RS02995;Name=LP088_RS02995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS02995;old_locus_tag=LP088_02990 NZ_CP087814.1 GeneMarkS-2+ CDS 578257 578919 . + 0 ID=cds-WP_264676126.1;Parent=gene-LP088_RS02995;Dbxref=Genbank:WP_264676126.1;Name=WP_264676126.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS02995;product=hypothetical protein;protein_id=WP_264676126.1;transl_table=11 NZ_CP087814.1 RefSeq gene 578925 579497 . + . ID=gene-LP088_RS03000;Name=LP088_RS03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03000;old_locus_tag=LP088_02995 NZ_CP087814.1 Protein Homology CDS 578925 579497 . + 0 ID=cds-WP_078273215.1;Parent=gene-LP088_RS03000;Dbxref=Genbank:WP_078273215.1;Name=WP_078273215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444480.1;locus_tag=LP088_RS03000;product=phosphatidylglycerophosphatase A;protein_id=WP_078273215.1;transl_table=11 NZ_CP087814.1 RefSeq gene 579522 580037 . + . ID=gene-LP088_RS03005;Name=LP088_RS03005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03005;old_locus_tag=LP088_03000 NZ_CP087814.1 GeneMarkS-2+ CDS 579522 580037 . + 0 ID=cds-WP_112741883.1;Parent=gene-LP088_RS03005;Dbxref=Genbank:WP_112741883.1;Name=WP_112741883.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS03005;product=hypothetical protein;protein_id=WP_112741883.1;transl_table=11 NZ_CP087814.1 RefSeq gene 580543 581010 . + . ID=gene-LP088_RS03010;Name=LP088_RS03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03010;old_locus_tag=LP088_03005 NZ_CP087814.1 GeneMarkS-2+ CDS 580543 581010 . + 0 ID=cds-WP_112741885.1;Parent=gene-LP088_RS03010;Dbxref=Genbank:WP_112741885.1;Name=WP_112741885.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS03010;product=hypothetical protein;protein_id=WP_112741885.1;transl_table=11 NZ_CP087814.1 RefSeq gene 581249 582604 . + . ID=gene-LP088_RS03015;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=LP088_RS03015;old_locus_tag=LP088_03010 NZ_CP087814.1 Protein Homology CDS 581249 582604 . + 0 ID=cds-WP_112741886.1;Parent=gene-LP088_RS03015;Dbxref=Genbank:WP_112741886.1;Name=WP_112741886.1;Ontology_term=GO:0009103,GO:0009252,GO:0003977,GO:0019134,GO:0005737;gbkey=CDS;gene=glmU;go_component=cytoplasm|0005737||IEA;go_function=UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514701.1;locus_tag=LP088_RS03015;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_112741886.1;transl_table=11 NZ_CP087814.1 RefSeq gene 582945 585653 . - . ID=gene-LP088_RS03020;Name=LP088_RS03020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03020;old_locus_tag=LP088_03015 NZ_CP087814.1 Protein Homology CDS 582945 585653 . - 0 ID=cds-WP_112741887.1;Parent=gene-LP088_RS03020;Dbxref=Genbank:WP_112741887.1;Name=WP_112741887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003659066.1;locus_tag=LP088_RS03020;product=transglycosylase domain-containing protein;protein_id=WP_112741887.1;transl_table=11 NZ_CP087814.1 RefSeq gene 585921 586979 . + . ID=gene-LP088_RS03025;Name=LP088_RS03025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03025;old_locus_tag=LP088_03020 NZ_CP087814.1 Protein Homology CDS 585921 586979 . + 0 ID=cds-WP_112741888.1;Parent=gene-LP088_RS03025;Dbxref=Genbank:WP_112741888.1;Name=WP_112741888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514486.1;locus_tag=LP088_RS03025;product=pilus assembly protein PilM;protein_id=WP_112741888.1;transl_table=11 NZ_CP087814.1 RefSeq gene 586979 587857 . + . ID=gene-LP088_RS03030;Name=LP088_RS03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03030;old_locus_tag=LP088_03025 NZ_CP087814.1 Protein Homology CDS 586979 587857 . + 0 ID=cds-WP_078273209.1;Parent=gene-LP088_RS03030;Dbxref=Genbank:WP_078273209.1;Name=WP_078273209.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016992.2;locus_tag=LP088_RS03030;product=PilN domain-containing protein;protein_id=WP_078273209.1;transl_table=11 NZ_CP087814.1 RefSeq gene 587854 588696 . + . ID=gene-LP088_RS03035;Name=LP088_RS03035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03035;old_locus_tag=LP088_03030 NZ_CP087814.1 Protein Homology CDS 587854 588696 . + 0 ID=cds-WP_078273208.1;Parent=gene-LP088_RS03035;Dbxref=Genbank:WP_078273208.1;Name=WP_078273208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011281139.1;locus_tag=LP088_RS03035;product=type 4a pilus biogenesis protein PilO;protein_id=WP_078273208.1;transl_table=11 NZ_CP087814.1 RefSeq gene 588693 589223 . + . ID=gene-LP088_RS03040;Name=LP088_RS03040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03040;old_locus_tag=LP088_03035 NZ_CP087814.1 Protein Homology CDS 588693 589223 . + 0 ID=cds-WP_228157777.1;Parent=gene-LP088_RS03040;Dbxref=Genbank:WP_228157777.1;Name=WP_228157777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444313.1;locus_tag=LP088_RS03040;product=pilus assembly protein PilP;protein_id=WP_228157777.1;transl_table=11 NZ_CP087814.1 RefSeq gene 589258 591378 . + . ID=gene-LP088_RS03045;Name=pilQ;gbkey=Gene;gene=pilQ;gene_biotype=protein_coding;locus_tag=LP088_RS03045;old_locus_tag=LP088_03040 NZ_CP087814.1 Protein Homology CDS 589258 591378 . + 0 ID=cds-WP_078273207.1;Parent=gene-LP088_RS03045;Dbxref=Genbank:WP_078273207.1;Name=WP_078273207.1;Ontology_term=GO:0009297,GO:0009306;gbkey=CDS;gene=pilQ;go_process=pilus assembly|0009297||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514482.1;locus_tag=LP088_RS03045;product=type IV pilus secretin PilQ;protein_id=WP_078273207.1;transl_table=11 NZ_CP087814.1 RefSeq gene 591500 592108 . + . ID=gene-LP088_RS03050;Name=LP088_RS03050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03050;old_locus_tag=LP088_03045 NZ_CP087814.1 Protein Homology CDS 591500 592108 . + 0 ID=cds-WP_078273206.1;Parent=gene-LP088_RS03050;Dbxref=Genbank:WP_078273206.1;Name=WP_078273206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657653.1;locus_tag=LP088_RS03050;product=shikimate kinase;protein_id=WP_078273206.1;transl_table=11 NZ_CP087814.1 RefSeq gene 592155 593255 . + . ID=gene-LP088_RS03055;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=LP088_RS03055;old_locus_tag=LP088_03050 NZ_CP087814.1 Protein Homology CDS 592155 593255 . + 0 ID=cds-WP_112741889.1;Parent=gene-LP088_RS03055;Dbxref=Genbank:WP_112741889.1;Name=WP_112741889.1;Ontology_term=GO:0009423,GO:0003856;gbkey=CDS;gene=aroB;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201703.1;locus_tag=LP088_RS03055;product=3-dehydroquinate synthase;protein_id=WP_112741889.1;transl_table=11 NZ_CP087814.1 RefSeq gene 593299 594300 . + . ID=gene-LP088_RS03060;Name=LP088_RS03060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03060;old_locus_tag=LP088_03055 NZ_CP087814.1 GeneMarkS-2+ CDS 593299 594300 . + 0 ID=cds-WP_112741890.1;Parent=gene-LP088_RS03060;Dbxref=Genbank:WP_112741890.1;Name=WP_112741890.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS03060;product=hypothetical protein;protein_id=WP_112741890.1;transl_table=11 NZ_CP087814.1 RefSeq gene 594356 594979 . + . ID=gene-LP088_RS03065;Name=LP088_RS03065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03065;old_locus_tag=LP088_03060 NZ_CP087814.1 Protein Homology CDS 594356 594979 . + 0 ID=cds-WP_112741891.1;Parent=gene-LP088_RS03065;Dbxref=Genbank:WP_112741891.1;Name=WP_112741891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009502274.1;locus_tag=LP088_RS03065;product=carbonic anhydrase;protein_id=WP_112741891.1;transl_table=11 NZ_CP087814.1 RefSeq gene 595036 595569 . + . ID=gene-LP088_RS03070;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=LP088_RS03070;old_locus_tag=LP088_03065 NZ_CP087814.1 Protein Homology CDS 595036 595569 . + 0 ID=cds-WP_112741892.1;Parent=gene-LP088_RS03070;Dbxref=Genbank:WP_112741892.1;Name=WP_112741892.1;Ontology_term=GO:0005975,GO:0051596,GO:0004462;gbkey=CDS;gene=gloA;go_function=lactoylglutathione lyase activity|0004462||IEA;go_process=carbohydrate metabolic process|0005975||IEA,methylglyoxal catabolic process|0051596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019672556.1;locus_tag=LP088_RS03070;product=lactoylglutathione lyase;protein_id=WP_112741892.1;transl_table=11 NZ_CP087814.1 RefSeq gene 595620 595696 . - . ID=gene-LP088_RS03075;Name=LP088_RS03075;gbkey=Gene;gene_biotype=tRNA;locus_tag=LP088_RS03075;old_locus_tag=LP088_03070 NZ_CP087814.1 tRNAscan-SE tRNA 595620 595696 . - . ID=rna-LP088_RS03075;Parent=gene-LP088_RS03075;anticodon=(pos:complement(595660..595662));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS03075;product=tRNA-Arg NZ_CP087814.1 tRNAscan-SE exon 595620 595696 . - . ID=exon-LP088_RS03075-1;Parent=rna-LP088_RS03075;anticodon=(pos:complement(595660..595662));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS03075;product=tRNA-Arg NZ_CP087814.1 RefSeq gene 595888 596433 . + . ID=gene-LP088_RS03080;Name=LP088_RS03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03080;old_locus_tag=LP088_03075 NZ_CP087814.1 Protein Homology CDS 595888 596433 . + 0 ID=cds-WP_078273201.1;Parent=gene-LP088_RS03080;Dbxref=Genbank:WP_078273201.1;Name=WP_078273201.1;Ontology_term=GO:0009055,GO:0020037;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007116371.1;locus_tag=LP088_RS03080;product=c-type cytochrome;protein_id=WP_078273201.1;transl_table=11 NZ_CP087814.1 RefSeq gene 596531 597214 . + . ID=gene-LP088_RS03085;Name=LP088_RS03085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03085;old_locus_tag=LP088_03080 NZ_CP087814.1 Protein Homology CDS 596531 597214 . + 0 ID=cds-WP_078273200.1;Parent=gene-LP088_RS03085;Dbxref=Genbank:WP_078273200.1;Name=WP_078273200.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012376.2;locus_tag=LP088_RS03085;product=serine/threonine protein phosphatase;protein_id=WP_078273200.1;transl_table=11 NZ_CP087814.1 RefSeq gene 597316 598296 . + . ID=gene-LP088_RS03090;Name=LP088_RS03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03090;old_locus_tag=LP088_03085 NZ_CP087814.1 Protein Homology CDS 597316 598296 . + 0 ID=cds-WP_078273199.1;Parent=gene-LP088_RS03090;Dbxref=Genbank:WP_078273199.1;Name=WP_078273199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004996073.1;locus_tag=LP088_RS03090;product=ABC transporter ATP-binding protein;protein_id=WP_078273199.1;transl_table=11 NZ_CP087814.1 RefSeq gene 598289 599059 . + . ID=gene-LP088_RS03095;Name=LP088_RS03095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03095;old_locus_tag=LP088_03090 NZ_CP087814.1 Protein Homology CDS 598289 599059 . + 0 ID=cds-WP_112741893.1;Parent=gene-LP088_RS03095;Dbxref=Genbank:WP_112741893.1;Name=WP_112741893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007116373.1;locus_tag=LP088_RS03095;product=ABC transporter permease;protein_id=WP_112741893.1;transl_table=11 NZ_CP087814.1 RefSeq gene 599140 599997 . + . ID=gene-LP088_RS03100;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=LP088_RS03100;old_locus_tag=LP088_03095 NZ_CP087814.1 Protein Homology CDS 599140 599997 . + 0 ID=cds-WP_112741894.1;Parent=gene-LP088_RS03100;Dbxref=Genbank:WP_112741894.1;Name=WP_112741894.1;Note=Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;Ontology_term=GO:0008616,GO:0033739,GO:0043867;gbkey=CDS;gene=queF;go_function=preQ1 synthase activity|0033739||IEA,7-cyano-7-deazaguanine tRNA-ribosyltransferase activity|0043867||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: protein motif:HMM:TIGR03138.1;locus_tag=LP088_RS03100;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=WP_112741894.1;transl_table=11 NZ_CP087814.1 RefSeq gene 600144 602291 . - . ID=gene-LP088_RS03105;Name=LP088_RS03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03105;old_locus_tag=LP088_03100 NZ_CP087814.1 Protein Homology CDS 600144 602291 . - 0 ID=cds-WP_208624077.1;Parent=gene-LP088_RS03105;Dbxref=Genbank:WP_208624077.1;Name=WP_208624077.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013591.2;locus_tag=LP088_RS03105;product=M3 family metallopeptidase;protein_id=WP_208624077.1;transl_table=11 NZ_CP087814.1 RefSeq gene 602419 604146 . - . ID=gene-LP088_RS03110;Name=LP088_RS03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03110;old_locus_tag=LP088_03105 NZ_CP087814.1 Protein Homology CDS 602419 604146 . - 0 ID=cds-WP_112741895.1;Parent=gene-LP088_RS03110;Dbxref=Genbank:WP_112741895.1;Name=WP_112741895.1;Ontology_term=GO:0006418,GO:0006433,GO:0000166,GO:0002161,GO:0004812,GO:0004827,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA editing activity|0002161||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA,prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003670173.1;locus_tag=LP088_RS03110;product=proline--tRNA ligase;protein_id=WP_112741895.1;transl_table=11 NZ_CP087814.1 RefSeq gene 604309 604986 . + . ID=gene-LP088_RS03115;Name=LP088_RS03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03115;old_locus_tag=LP088_03110 NZ_CP087814.1 Protein Homology CDS 604309 604986 . + 0 ID=cds-WP_078273194.1;Parent=gene-LP088_RS03115;Dbxref=Genbank:WP_078273194.1;Name=WP_078273194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009501393.1;locus_tag=LP088_RS03115;product=DUF4230 domain-containing protein;protein_id=WP_078273194.1;transl_table=11 NZ_CP087814.1 RefSeq gene 605793 606911 . + . ID=gene-LP088_RS03120;Name=LP088_RS03120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03120;old_locus_tag=LP088_03115 NZ_CP087814.1 GeneMarkS-2+ CDS 605793 606911 . + 0 ID=cds-WP_264676127.1;Parent=gene-LP088_RS03120;Dbxref=Genbank:WP_264676127.1;Name=WP_264676127.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS03120;product=hypothetical protein;protein_id=WP_264676127.1;transl_table=11 NZ_CP087814.1 RefSeq gene 607170 607697 . + . ID=gene-LP088_RS03125;Name=LP088_RS03125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03125;old_locus_tag=LP088_03120 NZ_CP087814.1 Protein Homology CDS 607170 607697 . + 0 ID=cds-WP_078273191.1;Parent=gene-LP088_RS03125;Dbxref=Genbank:WP_078273191.1;Name=WP_078273191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009501395.1;locus_tag=LP088_RS03125;product=ATP/GTP-binding protein;protein_id=WP_078273191.1;transl_table=11 NZ_CP087814.1 RefSeq gene 607745 608185 . + . ID=gene-LP088_RS03130;Name=LP088_RS03130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03130;old_locus_tag=LP088_03125 NZ_CP087814.1 Protein Homology CDS 607745 608185 . + 0 ID=cds-WP_112741898.1;Parent=gene-LP088_RS03130;Dbxref=Genbank:WP_112741898.1;Name=WP_112741898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519247.1;locus_tag=LP088_RS03130;product=roadblock/LC7 domain-containing protein;protein_id=WP_112741898.1;transl_table=11 NZ_CP087814.1 RefSeq gene 608549 610648 . + . ID=gene-LP088_RS03135;Name=LP088_RS03135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03135;old_locus_tag=LP088_03130 NZ_CP087814.1 Protein Homology CDS 608549 610648 . + 0 ID=cds-WP_112741899.1;Parent=gene-LP088_RS03135;Dbxref=Genbank:WP_112741899.1;Name=WP_112741899.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014567.2;locus_tag=LP088_RS03135;product=ATP-binding protein;protein_id=WP_112741899.1;transl_table=11 NZ_CP087814.1 RefSeq gene 610899 611282 . + . ID=gene-LP088_RS03140;Name=LP088_RS03140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03140;old_locus_tag=LP088_03135 NZ_CP087814.1 Protein Homology CDS 610899 611282 . + 0 ID=cds-WP_029103167.1;Parent=gene-LP088_RS03140;Dbxref=Genbank:WP_029103167.1;Name=WP_029103167.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009767173.1;locus_tag=LP088_RS03140;product=response regulator;protein_id=WP_029103167.1;transl_table=11 NZ_CP087814.1 RefSeq gene 611293 611820 . + . ID=gene-LP088_RS03145;Name=LP088_RS03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03145;old_locus_tag=LP088_03140 NZ_CP087814.1 GeneMarkS-2+ CDS 611293 611820 . + 0 ID=cds-WP_264676128.1;Parent=gene-LP088_RS03145;Dbxref=Genbank:WP_264676128.1;Name=WP_264676128.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS03145;product=hypothetical protein;protein_id=WP_264676128.1;transl_table=11 NZ_CP087814.1 RefSeq gene 612027 614618 . + . ID=gene-LP088_RS03150;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=LP088_RS03150;old_locus_tag=LP088_03145 NZ_CP087814.1 Protein Homology CDS 612027 614618 . + 0 ID=cds-WP_264676327.1;Parent=gene-LP088_RS03150;Dbxref=Genbank:WP_264676327.1;Name=WP_264676327.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196278.1;locus_tag=LP088_RS03150;product=type I DNA topoisomerase;protein_id=WP_264676327.1;transl_table=11 NZ_CP087814.1 RefSeq gene 614620 615702 . + . ID=gene-LP088_RS03155;Name=LP088_RS03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03155;old_locus_tag=LP088_03150 NZ_CP087814.1 Protein Homology CDS 614620 615702 . + 0 ID=cds-WP_264676129.1;Parent=gene-LP088_RS03155;Dbxref=Genbank:WP_264676129.1;Name=WP_264676129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011281127.1;locus_tag=LP088_RS03155;product=NYN domain-containing protein;protein_id=WP_264676129.1;transl_table=11 NZ_CP087814.1 RefSeq gene 615803 616177 . + . ID=gene-LP088_RS03160;Name=LP088_RS03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03160;old_locus_tag=LP088_03155 NZ_CP087814.1 Protein Homology CDS 615803 616177 . + 0 ID=cds-WP_078273183.1;Parent=gene-LP088_RS03160;Dbxref=Genbank:WP_078273183.1;Name=WP_078273183.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021390.2;locus_tag=LP088_RS03160;product=MliC family protein;protein_id=WP_078273183.1;transl_table=11 NZ_CP087814.1 RefSeq gene 616240 616551 . + . ID=gene-LP088_RS03165;Name=LP088_RS03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03165;old_locus_tag=LP088_03160 NZ_CP087814.1 Protein Homology CDS 616240 616551 . + 0 ID=cds-WP_112742790.1;Parent=gene-LP088_RS03165;Dbxref=Genbank:WP_112742790.1;Name=WP_112742790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004675009.1;locus_tag=LP088_RS03165;product=DUF3817 domain-containing protein;protein_id=WP_112742790.1;transl_table=11 NZ_CP087814.1 RefSeq gene 616592 616682 . - . ID=gene-LP088_RS03170;Name=LP088_RS03170;gbkey=Gene;gene_biotype=tRNA;locus_tag=LP088_RS03170;old_locus_tag=LP088_03165 NZ_CP087814.1 tRNAscan-SE tRNA 616592 616682 . - . ID=rna-LP088_RS03170;Parent=gene-LP088_RS03170;anticodon=(pos:complement(616646..616648));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS03170;product=tRNA-Ser NZ_CP087814.1 tRNAscan-SE exon 616592 616682 . - . ID=exon-LP088_RS03170-1;Parent=rna-LP088_RS03170;anticodon=(pos:complement(616646..616648));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS03170;product=tRNA-Ser NZ_CP087814.1 RefSeq gene 616845 617720 . + . ID=gene-LP088_RS03175;Name=LP088_RS03175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03175;old_locus_tag=LP088_03170 NZ_CP087814.1 Protein Homology CDS 616845 617720 . + 0 ID=cds-WP_228157781.1;Parent=gene-LP088_RS03175;Dbxref=Genbank:WP_228157781.1;Name=WP_228157781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198926.1;locus_tag=LP088_RS03175;product=energy transducer TonB;protein_id=WP_228157781.1;transl_table=11 NZ_CP087814.1 RefSeq gene 617934 618809 . + . ID=gene-LP088_RS03180;Name=LP088_RS03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03180;old_locus_tag=LP088_03175 NZ_CP087814.1 Protein Homology CDS 617934 618809 . + 0 ID=cds-WP_228157827.1;Parent=gene-LP088_RS03180;Dbxref=Genbank:WP_228157827.1;Name=WP_228157827.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007394953.1;locus_tag=LP088_RS03180;product=mechanosensitive ion channel;protein_id=WP_228157827.1;transl_table=11 NZ_CP087814.1 RefSeq gene 619017 619499 . + . ID=gene-LP088_RS03185;Name=LP088_RS03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03185;old_locus_tag=LP088_03180 NZ_CP087814.1 Protein Homology CDS 619017 619499 . + 0 ID=cds-WP_078273181.1;Parent=gene-LP088_RS03185;Dbxref=Genbank:WP_078273181.1;Name=WP_078273181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003656516.1;locus_tag=LP088_RS03185;product=low molecular weight phosphotyrosine protein phosphatase;protein_id=WP_078273181.1;transl_table=11 NZ_CP087814.1 RefSeq gene 619492 620541 . + . ID=gene-LP088_RS03190;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=LP088_RS03190;old_locus_tag=LP088_03185 NZ_CP087814.1 Protein Homology CDS 619492 620541 . + 0 ID=cds-WP_078273180.1;Parent=gene-LP088_RS03190;Dbxref=Genbank:WP_078273180.1;Name=WP_078273180.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003668629.1;locus_tag=LP088_RS03190;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_078273180.1;transl_table=11 NZ_CP087814.1 RefSeq gene 620529 621245 . + . ID=gene-LP088_RS03195;Name=LP088_RS03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03195;old_locus_tag=LP088_03190 NZ_CP087814.1 Protein Homology CDS 620529 621245 . + 0 ID=cds-WP_264676130.1;Parent=gene-LP088_RS03195;Dbxref=Genbank:WP_264676130.1;Name=WP_264676130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003659479.1;locus_tag=LP088_RS03195;product=YdcF family protein;protein_id=WP_264676130.1;transl_table=11 NZ_CP087814.1 RefSeq gene 621334 621424 . + . ID=gene-LP088_RS03200;Name=LP088_RS03200;gbkey=Gene;gene_biotype=tRNA;locus_tag=LP088_RS03200;old_locus_tag=LP088_03195 NZ_CP087814.1 tRNAscan-SE tRNA 621334 621424 . + . ID=rna-LP088_RS03200;Parent=gene-LP088_RS03200;anticodon=(pos:621368..621370);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS03200;product=tRNA-Ser NZ_CP087814.1 tRNAscan-SE exon 621334 621424 . + . ID=exon-LP088_RS03200-1;Parent=rna-LP088_RS03200;anticodon=(pos:621368..621370);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS03200;product=tRNA-Ser NZ_CP087814.1 RefSeq gene 621477 622121 . + . ID=gene-LP088_RS03205;Name=LP088_RS03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03205;old_locus_tag=LP088_03200 NZ_CP087814.1 Protein Homology CDS 621477 622121 . + 0 ID=cds-WP_078273178.1;Parent=gene-LP088_RS03205;Dbxref=Genbank:WP_078273178.1;Name=WP_078273178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005404550.1;locus_tag=LP088_RS03205;product=LysE/ArgO family amino acid transporter;protein_id=WP_078273178.1;transl_table=11 NZ_CP087814.1 RefSeq gene 622272 623318 . + . ID=gene-LP088_RS03210;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=LP088_RS03210;old_locus_tag=LP088_03205 NZ_CP087814.1 Protein Homology CDS 622272 623318 . + 0 ID=cds-WP_078273225.1;Parent=gene-LP088_RS03210;Dbxref=Genbank:WP_078273225.1;Name=WP_078273225.1;Ontology_term=GO:0006412,GO:0005525,GO:0043022;gbkey=CDS;gene=rsgA;go_function=GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003665422.1;locus_tag=LP088_RS03210;product=ribosome small subunit-dependent GTPase A;protein_id=WP_078273225.1;transl_table=11 NZ_CP087814.1 RefSeq gene 623385 623810 . + . ID=gene-LP088_RS03215;Name=LP088_RS03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03215;old_locus_tag=LP088_03210 NZ_CP087814.1 Protein Homology CDS 623385 623810 . + 0 ID=cds-WP_078273177.1;Parent=gene-LP088_RS03215;Dbxref=Genbank:WP_078273177.1;Name=WP_078273177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009502057.1;locus_tag=LP088_RS03215;product=rhodanese-like domain-containing protein;protein_id=WP_078273177.1;transl_table=11 NZ_CP087814.1 RefSeq gene 623905 624165 . + . ID=gene-LP088_RS03220;Name=grxC;gbkey=Gene;gene=grxC;gene_biotype=protein_coding;locus_tag=LP088_RS03220;old_locus_tag=LP088_03215 NZ_CP087814.1 Protein Homology CDS 623905 624165 . + 0 ID=cds-WP_078273176.1;Parent=gene-LP088_RS03220;Dbxref=Genbank:WP_078273176.1;Name=WP_078273176.1;Ontology_term=GO:0015036;gbkey=CDS;gene=grxC;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005182284.1;locus_tag=LP088_RS03220;product=glutaredoxin 3;protein_id=WP_078273176.1;transl_table=11 NZ_CP087814.1 RefSeq gene 624219 624659 . + . ID=gene-LP088_RS03225;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=LP088_RS03225;old_locus_tag=LP088_03220 NZ_CP087814.1 Protein Homology CDS 624219 624659 . + 0 ID=cds-WP_029103669.1;Parent=gene-LP088_RS03225;Dbxref=Genbank:WP_029103669.1;Name=WP_029103669.1;Ontology_term=GO:0015031,GO:0051262,GO:0051082;gbkey=CDS;gene=secB;go_function=unfolded protein binding|0051082||IEA;go_process=protein transport|0015031||IEA,protein tetramerization|0051262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199239.1;locus_tag=LP088_RS03225;product=protein-export chaperone SecB;protein_id=WP_029103669.1;transl_table=11 NZ_CP087814.1 RefSeq gene 624742 625077 . - . ID=gene-LP088_RS03230;Name=LP088_RS03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03230;old_locus_tag=LP088_03225 NZ_CP087814.1 Protein Homology CDS 624742 625077 . - 0 ID=cds-WP_062498976.1;Parent=gene-LP088_RS03230;Dbxref=Genbank:WP_062498976.1;Name=WP_062498976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519328.1;locus_tag=LP088_RS03230;product=hypothetical protein;protein_id=WP_062498976.1;transl_table=11 NZ_CP087814.1 RefSeq gene 625241 625627 . - . ID=gene-LP088_RS03235;Name=LP088_RS03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03235;old_locus_tag=LP088_03230 NZ_CP087814.1 Protein Homology CDS 625241 625627 . - 0 ID=cds-WP_228157782.1;Parent=gene-LP088_RS03235;Dbxref=Genbank:WP_228157782.1;Name=WP_228157782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520500.1;locus_tag=LP088_RS03235;product=helix-turn-helix domain-containing protein;protein_id=WP_228157782.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 625756 626364 . + . ID=gene-LP088_RS03240;Name=LP088_RS03240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS03240;old_locus_tag=LP088_03235;partial=true;pseudo=true;start_range=.,625756 NZ_CP087814.1 Protein Homology CDS 625756 626364 . + 0 ID=cds-LP088_RS03240;Parent=gene-LP088_RS03240;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033545.0;locus_tag=LP088_RS03240;partial=true;product=IS630 family transposase;pseudo=true;start_range=.,625756;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 626437 626583 . + . ID=gene-LP088_RS03245;Name=LP088_RS03245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS03245;old_locus_tag=LP088_03240;partial=true;pseudo=true;start_range=.,626437 NZ_CP087814.1 Protein Homology CDS 626437 626583 . + 0 ID=cds-LP088_RS03245;Parent=gene-LP088_RS03245;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012478345.1;locus_tag=LP088_RS03245;partial=true;product=IS30 family transposase;pseudo=true;start_range=.,626437;transl_table=11 NZ_CP087814.1 RefSeq gene 626746 627225 . + . ID=gene-LP088_RS03250;Name=LP088_RS03250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03250;old_locus_tag=LP088_03245 NZ_CP087814.1 Protein Homology CDS 626746 627225 . + 0 ID=cds-WP_228157828.1;Parent=gene-LP088_RS03250;Dbxref=Genbank:WP_228157828.1;Name=WP_228157828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019671812.1;locus_tag=LP088_RS03250;product=DUF2726 domain-containing protein;protein_id=WP_228157828.1;transl_table=11 NZ_CP087814.1 RefSeq gene 627311 628744 . + . ID=gene-LP088_RS03255;Name=LP088_RS03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03255;old_locus_tag=LP088_03250 NZ_CP087814.1 Protein Homology CDS 627311 628744 . + 0 ID=cds-WP_264683319.1;Parent=gene-LP088_RS03255;Dbxref=Genbank:WP_264683319.1;Name=WP_264683319.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016462.2;locus_tag=LP088_RS03255;product=surface lipoprotein assembly modifier;protein_id=WP_264683319.1;transl_table=11 NZ_CP087814.1 RefSeq gene 629088 631790 . + . ID=gene-LP088_RS03260;Name=LP088_RS03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03260;old_locus_tag=LP088_03255 NZ_CP087814.1 Protein Homology CDS 629088 631790 . + 0 ID=cds-WP_078274058.1;Parent=gene-LP088_RS03260;Dbxref=Genbank:WP_078274058.1;Name=WP_078274058.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013466.2;locus_tag=LP088_RS03260;product=transferrin-binding protein-like solute binding protein;protein_id=WP_078274058.1;transl_table=11 NZ_CP087814.1 RefSeq gene 631807 634557 . + . ID=gene-LP088_RS03265;Name=LP088_RS03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03265;old_locus_tag=LP088_03260 NZ_CP087814.1 Protein Homology CDS 631807 634557 . + 0 ID=cds-WP_264676132.1;Parent=gene-LP088_RS03265;Dbxref=Genbank:WP_264676132.1;Name=WP_264676132.1;Ontology_term=GO:0006810,GO:0022857,GO:0038023,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=transmembrane transporter activity|0022857||IEA,signaling receptor activity|0038023||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: protein motif:HMM:TIGR01776.1;locus_tag=LP088_RS03265;product=lactoferrin/transferrin family TonB-dependent receptor;protein_id=WP_264676132.1;transl_table=11 NZ_CP087814.1 RefSeq gene 634606 635055 . - . ID=gene-LP088_RS03270;Name=LP088_RS03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03270;old_locus_tag=LP088_03265 NZ_CP087814.1 Protein Homology CDS 634606 635055 . - 0 ID=cds-WP_264676133.1;Parent=gene-LP088_RS03270;Dbxref=Genbank:WP_264676133.1;Name=WP_264676133.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013487.2;locus_tag=LP088_RS03270;product=cytochrome c;protein_id=WP_264676133.1;transl_table=11 NZ_CP087814.1 RefSeq gene 635237 636229 . - . ID=gene-LP088_RS03275;Name=hemF;gbkey=Gene;gene=hemF;gene_biotype=protein_coding;locus_tag=LP088_RS03275;old_locus_tag=LP088_03270 NZ_CP087814.1 Protein Homology CDS 635237 636229 . - 0 ID=cds-WP_078274055.1;Parent=gene-LP088_RS03275;Dbxref=Genbank:WP_078274055.1;Name=WP_078274055.1;Ontology_term=GO:0006779,GO:0004109;gbkey=CDS;gene=hemF;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007394263.1;locus_tag=LP088_RS03275;product=oxygen-dependent coproporphyrinogen oxidase;protein_id=WP_078274055.1;transl_table=11 NZ_CP087814.1 RefSeq gene 636249 636842 . - . ID=gene-LP088_RS03280;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=LP088_RS03280;old_locus_tag=LP088_03275 NZ_CP087814.1 Protein Homology CDS 636249 636842 . - 0 ID=cds-WP_208624078.1;Parent=gene-LP088_RS03280;Dbxref=Genbank:WP_208624078.1;Name=WP_208624078.1;Ontology_term=GO:0003935;gbkey=CDS;gene=ribA;go_function=GTP cyclohydrolase II activity|0003935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007115593.1;locus_tag=LP088_RS03280;product=GTP cyclohydrolase II;protein_id=WP_208624078.1;transl_table=11 NZ_CP087814.1 RefSeq gene 637063 639162 . + . ID=gene-LP088_RS03285;Name=LP088_RS03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03285;old_locus_tag=LP088_03280 NZ_CP087814.1 Protein Homology CDS 637063 639162 . + 0 ID=cds-WP_078274054.1;Parent=gene-LP088_RS03285;Dbxref=Genbank:WP_078274054.1;Name=WP_078274054.1;Ontology_term=GO:0016114,GO:0008661;gbkey=CDS;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010195857.1;locus_tag=LP088_RS03285;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_078274054.1;transl_table=11 NZ_CP087814.1 RefSeq gene 639210 639443 . + . ID=gene-LP088_RS03290;Name=LP088_RS03290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03290;old_locus_tag=LP088_03285 NZ_CP087814.1 Protein Homology CDS 639210 639443 . + 0 ID=cds-WP_112741908.1;Parent=gene-LP088_RS03290;Dbxref=Genbank:WP_112741908.1;Name=WP_112741908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000557549.1;locus_tag=LP088_RS03290;product=antitoxin;protein_id=WP_112741908.1;transl_table=11 NZ_CP087814.1 RefSeq gene 639458 639859 . + . ID=gene-LP088_RS03295;Name=LP088_RS03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03295;old_locus_tag=LP088_03290 NZ_CP087814.1 Protein Homology CDS 639458 639859 . + 0 ID=cds-WP_078274052.1;Parent=gene-LP088_RS03295;Dbxref=Genbank:WP_078274052.1;Name=WP_078274052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004833671.1;locus_tag=LP088_RS03295;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_078274052.1;transl_table=11 NZ_CP087814.1 RefSeq gene 640383 640883 . + . ID=gene-LP088_RS03300;Name=LP088_RS03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03300;old_locus_tag=LP088_03295 NZ_CP087814.1 Protein Homology CDS 640383 640883 . + 0 ID=cds-WP_112741909.1;Parent=gene-LP088_RS03300;Dbxref=Genbank:WP_112741909.1;Name=WP_112741909.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026253.2;locus_tag=LP088_RS03300;product=WG repeat-containing protein;protein_id=WP_112741909.1;transl_table=11 NZ_CP087814.1 RefSeq gene 641005 641835 . + . ID=gene-LP088_RS03305;Name=LP088_RS03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03305;old_locus_tag=LP088_03300 NZ_CP087814.1 Protein Homology CDS 641005 641835 . + 0 ID=cds-WP_078274050.1;Parent=gene-LP088_RS03305;Dbxref=Genbank:WP_078274050.1;Name=WP_078274050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279533.1;locus_tag=LP088_RS03305;product=inositol monophosphatase;protein_id=WP_078274050.1;transl_table=11 NZ_CP087814.1 RefSeq gene 641934 642623 . - . ID=gene-LP088_RS03310;Name=LP088_RS03310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03310;old_locus_tag=LP088_03305 NZ_CP087814.1 Protein Homology CDS 641934 642623 . - 0 ID=cds-WP_078274049.1;Parent=gene-LP088_RS03310;Dbxref=Genbank:WP_078274049.1;Name=WP_078274049.1;Note=The SIMPL domain is named for its presence in mouse protein SIMPL (signalling molecule that associates with mouse pelle-like kinase). Bacterial member BP26%2C from Brucella%2C was shown to assemble into a channel-like structure%2C while YggE from E. coli has been associated with resistance to oxidative stress.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016300.2;locus_tag=LP088_RS03310;product=SIMPL domain-containing protein;protein_id=WP_078274049.1;transl_table=11 NZ_CP087814.1 RefSeq gene 643048 643144 . + . ID=gene-LP088_RS03315;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=LP088_RS03315;old_locus_tag=LP088_03310 NZ_CP087814.1 cmsearch SRP_RNA 643048 643144 . + . ID=rna-LP088_RS03315;Parent=gene-LP088_RS03315;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LP088_RS03315;product=signal recognition particle sRNA small type NZ_CP087814.1 cmsearch exon 643048 643144 . + . ID=exon-LP088_RS03315-1;Parent=rna-LP088_RS03315;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LP088_RS03315;product=signal recognition particle sRNA small type NZ_CP087814.1 RefSeq gene 643359 643778 . - . ID=gene-LP088_RS03320;Name=LP088_RS03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03320;old_locus_tag=LP088_03315 NZ_CP087814.1 Protein Homology CDS 643359 643778 . - 0 ID=cds-WP_078274047.1;Parent=gene-LP088_RS03320;Dbxref=Genbank:WP_078274047.1;Name=WP_078274047.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004925636.1;locus_tag=LP088_RS03320;product=S4 domain-containing protein;protein_id=WP_078274047.1;transl_table=11 NZ_CP087814.1 RefSeq gene 643775 643951 . - . ID=gene-LP088_RS03325;Name=LP088_RS03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03325;old_locus_tag=LP088_03320 NZ_CP087814.1 Protein Homology CDS 643775 643951 . - 0 ID=cds-WP_228157829.1;Parent=gene-LP088_RS03325;Dbxref=Genbank:WP_228157829.1;Name=WP_228157829.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016178.2;locus_tag=LP088_RS03325;product=ASCH domain-containing protein;protein_id=WP_228157829.1;transl_table=11 NZ_CP087814.1 RefSeq gene 643970 644203 . - . ID=gene-LP088_RS03330;Name=LP088_RS03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03330;old_locus_tag=LP088_03325 NZ_CP087814.1 GeneMarkS-2+ CDS 643970 644203 . - 0 ID=cds-WP_112741910.1;Parent=gene-LP088_RS03330;Dbxref=Genbank:WP_112741910.1;Name=WP_112741910.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS03330;product=ASCH domain-containing protein;protein_id=WP_112741910.1;transl_table=11 NZ_CP087814.1 RefSeq gene 644266 646005 . - . ID=gene-LP088_RS03335;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=LP088_RS03335;old_locus_tag=LP088_03330 NZ_CP087814.1 Protein Homology CDS 644266 646005 . - 0 ID=cds-WP_078274045.1;Parent=gene-LP088_RS03335;Dbxref=Genbank:WP_078274045.1;Name=WP_078274045.1;Ontology_term=GO:0006420,GO:0004814,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003667607.1;locus_tag=LP088_RS03335;product=arginine--tRNA ligase;protein_id=WP_078274045.1;transl_table=11 NZ_CP087814.1 RefSeq gene 646096 646716 . - . ID=gene-LP088_RS03340;Name=LP088_RS03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03340;old_locus_tag=LP088_03335 NZ_CP087814.1 Protein Homology CDS 646096 646716 . - 0 ID=cds-WP_147287334.1;Parent=gene-LP088_RS03340;Dbxref=Genbank:WP_147287334.1;Name=WP_147287334.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026253.2;locus_tag=LP088_RS03340;product=WG repeat-containing protein;protein_id=WP_147287334.1;transl_table=11 NZ_CP087814.1 RefSeq gene 646698 647198 . - . ID=gene-LP088_RS03345;Name=LP088_RS03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03345;old_locus_tag=LP088_03340 NZ_CP087814.1 Protein Homology CDS 646698 647198 . - 0 ID=cds-WP_078274043.1;Parent=gene-LP088_RS03345;Dbxref=Genbank:WP_078274043.1;Name=WP_078274043.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026253.2;locus_tag=LP088_RS03345;product=WG repeat-containing protein;protein_id=WP_078274043.1;transl_table=11 NZ_CP087814.1 RefSeq gene 647195 647800 . - . ID=gene-LP088_RS03350;Name=LP088_RS03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03350;old_locus_tag=LP088_03345 NZ_CP087814.1 Protein Homology CDS 647195 647800 . - 0 ID=cds-WP_264690412.1;Parent=gene-LP088_RS03350;Dbxref=Genbank:WP_264690412.1;Name=WP_264690412.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026253.2;locus_tag=LP088_RS03350;product=WG repeat-containing protein;protein_id=WP_264690412.1;transl_table=11 NZ_CP087814.1 RefSeq gene 647949 650363 . - . ID=gene-LP088_RS03355;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=LP088_RS03355;old_locus_tag=LP088_03350 NZ_CP087814.1 Protein Homology CDS 647949 650363 . - 0 ID=cds-WP_078274041.1;Parent=gene-LP088_RS03355;Dbxref=Genbank:WP_078274041.1;Name=WP_078274041.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0016887,GO:0043565;gbkey=CDS;gene=lon;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA,ATP hydrolysis activity|0016887||IEA,sequence-specific DNA binding|0043565||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520196.1;locus_tag=LP088_RS03355;product=endopeptidase La;protein_id=WP_078274041.1;transl_table=11 NZ_CP087814.1 RefSeq gene 650473 651246 . - . ID=gene-LP088_RS03360;Name=LP088_RS03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03360;old_locus_tag=LP088_03355 NZ_CP087814.1 Protein Homology CDS 650473 651246 . - 0 ID=cds-WP_078274040.1;Parent=gene-LP088_RS03360;Dbxref=Genbank:WP_078274040.1;Name=WP_078274040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003673320.1;locus_tag=LP088_RS03360;product=methyltransferase domain-containing protein;protein_id=WP_078274040.1;transl_table=11 NZ_CP087814.1 RefSeq gene 651399 652346 . + . ID=gene-LP088_RS03365;Name=LP088_RS03365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03365;old_locus_tag=LP088_03360 NZ_CP087814.1 GeneMarkS-2+ CDS 651399 652346 . + 0 ID=cds-WP_078274039.1;Parent=gene-LP088_RS03365;Dbxref=Genbank:WP_078274039.1;Name=WP_078274039.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS03365;product=hypothetical protein;protein_id=WP_078274039.1;transl_table=11 NZ_CP087814.1 RefSeq gene 652497 653309 . - . ID=gene-LP088_RS03370;Name=LP088_RS03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03370;old_locus_tag=LP088_03365 NZ_CP087814.1 Protein Homology CDS 652497 653309 . - 0 ID=cds-WP_078274038.1;Parent=gene-LP088_RS03370;Dbxref=Genbank:WP_078274038.1;Name=WP_078274038.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026253.2;locus_tag=LP088_RS03370;product=WG repeat-containing protein;protein_id=WP_078274038.1;transl_table=11 NZ_CP087814.1 RefSeq gene 653306 653587 . - . ID=gene-LP088_RS03375;Name=LP088_RS03375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03375;old_locus_tag=LP088_03370 NZ_CP087814.1 GeneMarkS-2+ CDS 653306 653587 . - 0 ID=cds-WP_078274037.1;Parent=gene-LP088_RS03375;Dbxref=Genbank:WP_078274037.1;Name=WP_078274037.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS03375;product=hypothetical protein;protein_id=WP_078274037.1;transl_table=11 NZ_CP087814.1 RefSeq gene 653687 655084 . + . ID=gene-LP088_RS03380;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=LP088_RS03380;old_locus_tag=LP088_03375 NZ_CP087814.1 Protein Homology CDS 653687 655084 . + 0 ID=cds-WP_112741912.1;Parent=gene-LP088_RS03380;Dbxref=Genbank:WP_112741912.1;Name=WP_112741912.1;Ontology_term=GO:0006423,GO:0004817,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019518514.1;locus_tag=LP088_RS03380;product=cysteine--tRNA ligase;protein_id=WP_112741912.1;transl_table=11 NZ_CP087814.1 RefSeq gene 655232 656185 . + . ID=gene-LP088_RS03385;Name=LP088_RS03385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03385;old_locus_tag=LP088_03380 NZ_CP087814.1 Protein Homology CDS 655232 656185 . + 0 ID=cds-WP_078274035.1;Parent=gene-LP088_RS03385;Dbxref=Genbank:WP_078274035.1;Name=WP_078274035.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026253.2;locus_tag=LP088_RS03385;product=WG repeat-containing protein;protein_id=WP_078274035.1;transl_table=11 NZ_CP087814.1 RefSeq gene 656273 656674 . + . ID=gene-LP088_RS03390;Name=LP088_RS03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03390;old_locus_tag=LP088_03385 NZ_CP087814.1 GeneMarkS-2+ CDS 656273 656674 . + 0 ID=cds-WP_162860356.1;Parent=gene-LP088_RS03390;Dbxref=Genbank:WP_162860356.1;Name=WP_162860356.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS03390;product=hypothetical protein;protein_id=WP_162860356.1;transl_table=11 NZ_CP087814.1 RefSeq gene 656771 657373 . - . ID=gene-LP088_RS03395;Name=LP088_RS03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03395;old_locus_tag=LP088_03390 NZ_CP087814.1 GeneMarkS-2+ CDS 656771 657373 . - 0 ID=cds-WP_078275447.1;Parent=gene-LP088_RS03395;Dbxref=Genbank:WP_078275447.1;Name=WP_078275447.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS03395;product=hypothetical protein;protein_id=WP_078275447.1;transl_table=11 NZ_CP087814.1 RefSeq gene 657457 657777 . - . ID=gene-LP088_RS03400;Name=LP088_RS03400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03400;old_locus_tag=LP088_03395 NZ_CP087814.1 GeneMarkS-2+ CDS 657457 657777 . - 0 ID=cds-WP_078273377.1;Parent=gene-LP088_RS03400;Dbxref=Genbank:WP_078273377.1;Name=WP_078273377.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS03400;product=hypothetical protein;protein_id=WP_078273377.1;transl_table=11 NZ_CP087814.1 RefSeq gene 658082 659551 . + . ID=gene-LP088_RS03405;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=LP088_RS03405;old_locus_tag=LP088_03400 NZ_CP087814.1 Protein Homology CDS 658082 659551 . + 0 ID=cds-WP_078273376.1;Parent=gene-LP088_RS03405;Dbxref=Genbank:WP_078273376.1;Name=WP_078273376.1;Ontology_term=GO:0009152,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003659156.1;locus_tag=LP088_RS03405;product=IMP dehydrogenase;protein_id=WP_078273376.1;transl_table=11 NZ_CP087814.1 RefSeq gene 659616 659759 . - . ID=gene-LP088_RS03410;Name=LP088_RS03410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03410;old_locus_tag=LP088_03405 NZ_CP087814.1 GeneMarkS-2+ CDS 659616 659759 . - 0 ID=cds-WP_264676134.1;Parent=gene-LP088_RS03410;Dbxref=Genbank:WP_264676134.1;Name=WP_264676134.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS03410;product=hypothetical protein;protein_id=WP_264676134.1;transl_table=11 NZ_CP087814.1 RefSeq gene 659725 660201 . - . ID=gene-LP088_RS03415;Name=LP088_RS03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03415;old_locus_tag=LP088_03410 NZ_CP087814.1 GeneMarkS-2+ CDS 659725 660201 . - 0 ID=cds-WP_078273375.1;Parent=gene-LP088_RS03415;Dbxref=Genbank:WP_078273375.1;Name=WP_078273375.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS03415;product=hypothetical protein;protein_id=WP_078273375.1;transl_table=11 NZ_CP087814.1 RefSeq gene 660212 660808 . - . ID=gene-LP088_RS03420;Name=LP088_RS03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03420;old_locus_tag=LP088_03415 NZ_CP087814.1 GeneMarkS-2+ CDS 660212 660808 . - 0 ID=cds-WP_078273374.1;Parent=gene-LP088_RS03420;Dbxref=Genbank:WP_078273374.1;Name=WP_078273374.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS03420;product=hypothetical protein;protein_id=WP_078273374.1;transl_table=11 NZ_CP087814.1 RefSeq gene 660805 661353 . - . ID=gene-LP088_RS03425;Name=LP088_RS03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03425;old_locus_tag=LP088_03420 NZ_CP087814.1 GeneMarkS-2+ CDS 660805 661353 . - 0 ID=cds-WP_078273373.1;Parent=gene-LP088_RS03425;Dbxref=Genbank:WP_078273373.1;Name=WP_078273373.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS03425;product=hypothetical protein;protein_id=WP_078273373.1;transl_table=11 NZ_CP087814.1 RefSeq gene 661510 661842 . - . ID=gene-LP088_RS03430;Name=LP088_RS03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03430;old_locus_tag=LP088_03425 NZ_CP087814.1 Protein Homology CDS 661510 661842 . - 0 ID=cds-WP_078273372.1;Parent=gene-LP088_RS03430;Dbxref=Genbank:WP_078273372.1;Name=WP_078273372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007115719.1;locus_tag=LP088_RS03430;product=DUF3144 domain-containing protein;protein_id=WP_078273372.1;transl_table=11 NZ_CP087814.1 RefSeq gene 662057 663223 . - . ID=gene-LP088_RS03435;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=LP088_RS03435;old_locus_tag=LP088_03430 NZ_CP087814.1 Protein Homology CDS 662057 663223 . - 0 ID=cds-WP_078273371.1;Parent=gene-LP088_RS03435;Dbxref=Genbank:WP_078273371.1;Name=WP_078273371.1;Ontology_term=GO:0006556,GO:0004478;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007393815.1;locus_tag=LP088_RS03435;product=methionine adenosyltransferase;protein_id=WP_078273371.1;transl_table=11 NZ_CP087814.1 RefSeq gene 663441 663803 . + . ID=gene-LP088_RS03440;Name=LP088_RS03440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03440;old_locus_tag=LP088_03435 NZ_CP087814.1 GeneMarkS-2+ CDS 663441 663803 . + 0 ID=cds-WP_078273370.1;Parent=gene-LP088_RS03440;Dbxref=Genbank:WP_078273370.1;Name=WP_078273370.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS03440;product=hypothetical protein;protein_id=WP_078273370.1;transl_table=11 NZ_CP087814.1 RefSeq gene 664202 665035 . - . ID=gene-LP088_RS03445;Name=LP088_RS03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03445;old_locus_tag=LP088_03440 NZ_CP087814.1 GeneMarkS-2+ CDS 664202 665035 . - 0 ID=cds-WP_112741915.1;Parent=gene-LP088_RS03445;Dbxref=Genbank:WP_112741915.1;Name=WP_112741915.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS03445;product=epimerase;protein_id=WP_112741915.1;transl_table=11 NZ_CP087814.1 RefSeq gene 665032 665460 . - . ID=gene-LP088_RS03450;Name=LP088_RS03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03450;old_locus_tag=LP088_03445 NZ_CP087814.1 Protein Homology CDS 665032 665460 . - 0 ID=cds-WP_112741916.1;Parent=gene-LP088_RS03450;Dbxref=Genbank:WP_112741916.1;Name=WP_112741916.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016056.2;locus_tag=LP088_RS03450;product=DCC1-like thiol-disulfide oxidoreductase family protein;protein_id=WP_112741916.1;transl_table=11 NZ_CP087814.1 RefSeq gene 665457 666356 . - . ID=gene-LP088_RS03455;Name=LP088_RS03455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03455;old_locus_tag=LP088_03450 NZ_CP087814.1 Protein Homology CDS 665457 666356 . - 0 ID=cds-WP_112741917.1;Parent=gene-LP088_RS03455;Dbxref=Genbank:WP_112741917.1;Name=WP_112741917.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007394771.1;locus_tag=LP088_RS03455;product=TIGR01777 family oxidoreductase;protein_id=WP_112741917.1;transl_table=11 NZ_CP087814.1 RefSeq gene 666610 667521 . + . ID=gene-LP088_RS03460;Name=LP088_RS03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03460;old_locus_tag=LP088_03455 NZ_CP087814.1 Protein Homology CDS 666610 667521 . + 0 ID=cds-WP_078275357.1-2;Parent=gene-LP088_RS03460;Dbxref=Genbank:WP_078275357.1;Name=WP_078275357.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004282326.1;locus_tag=LP088_RS03460;product=IS982 family transposase;protein_id=WP_078275357.1;transl_table=11 NZ_CP087814.1 RefSeq gene 667449 667835 . - . ID=gene-LP088_RS03465;Name=LP088_RS03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03465;old_locus_tag=LP088_03460 NZ_CP087814.1 GeneMarkS-2+ CDS 667449 667835 . - 0 ID=cds-WP_264676135.1;Parent=gene-LP088_RS03465;Dbxref=Genbank:WP_264676135.1;Name=WP_264676135.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS03465;product=hypothetical protein;protein_id=WP_264676135.1;transl_table=11 NZ_CP087814.1 RefSeq gene 667844 668323 . - . ID=gene-LP088_RS03470;Name=LP088_RS03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03470;old_locus_tag=LP088_03465 NZ_CP087814.1 Protein Homology CDS 667844 668323 . - 0 ID=cds-WP_112741919.1;Parent=gene-LP088_RS03470;Dbxref=Genbank:WP_112741919.1;Name=WP_112741919.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021538.2;locus_tag=LP088_RS03470;product=DUF2269 domain-containing protein;protein_id=WP_112741919.1;transl_table=11 NZ_CP087814.1 RefSeq gene 668395 668784 . - . ID=gene-LP088_RS03475;Name=LP088_RS03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03475;old_locus_tag=LP088_03470 NZ_CP087814.1 Protein Homology CDS 668395 668784 . - 0 ID=cds-WP_112741920.1;Parent=gene-LP088_RS03475;Dbxref=Genbank:WP_112741920.1;Name=WP_112741920.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025154.2;locus_tag=LP088_RS03475;product=DoxX-like family protein;protein_id=WP_112741920.1;transl_table=11 NZ_CP087814.1 RefSeq gene 669042 669173 . + . ID=gene-LP088_RS03480;Name=LP088_RS03480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03480 NZ_CP087814.1 GeneMarkS-2+ CDS 669042 669173 . + 0 ID=cds-WP_264676136.1;Parent=gene-LP088_RS03480;Dbxref=Genbank:WP_264676136.1;Name=WP_264676136.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS03480;product=hypothetical protein;protein_id=WP_264676136.1;transl_table=11 NZ_CP087814.1 RefSeq gene 669170 669619 . - . ID=gene-LP088_RS03485;Name=LP088_RS03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03485;old_locus_tag=LP088_03475 NZ_CP087814.1 Protein Homology CDS 669170 669619 . - 0 ID=cds-WP_078273362.1;Parent=gene-LP088_RS03485;Dbxref=Genbank:WP_078273362.1;Name=WP_078273362.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016056.2;locus_tag=LP088_RS03485;product=DUF393 domain-containing protein;protein_id=WP_078273362.1;transl_table=11 NZ_CP087814.1 RefSeq gene 669672 670193 . - . ID=gene-LP088_RS03490;Name=LP088_RS03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03490;old_locus_tag=LP088_03480 NZ_CP087814.1 GeneMarkS-2+ CDS 669672 670193 . - 0 ID=cds-WP_078273361.1;Parent=gene-LP088_RS03490;Dbxref=Genbank:WP_078273361.1;Name=WP_078273361.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS03490;product=hypothetical protein;protein_id=WP_078273361.1;transl_table=11 NZ_CP087814.1 RefSeq gene 670203 670706 . - . ID=gene-LP088_RS03495;Name=LP088_RS03495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03495;old_locus_tag=LP088_03485 NZ_CP087814.1 GeneMarkS-2+ CDS 670203 670706 . - 0 ID=cds-WP_112741921.1;Parent=gene-LP088_RS03495;Dbxref=Genbank:WP_112741921.1;Name=WP_112741921.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS03495;product=hypothetical protein;protein_id=WP_112741921.1;transl_table=11 NZ_CP087814.1 RefSeq gene 670726 671244 . - . ID=gene-LP088_RS03500;Name=LP088_RS03500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03500;old_locus_tag=LP088_03490 NZ_CP087814.1 Protein Homology CDS 670726 671244 . - 0 ID=cds-WP_078273360.1;Parent=gene-LP088_RS03500;Dbxref=Genbank:WP_078273360.1;Name=WP_078273360.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019518992.1;locus_tag=LP088_RS03500;product=MarR family transcriptional regulator;protein_id=WP_078273360.1;transl_table=11 NZ_CP087814.1 RefSeq gene 671532 673046 . + . ID=gene-LP088_RS03505;Name=LP088_RS03505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03505;old_locus_tag=LP088_03495 NZ_CP087814.1 Protein Homology CDS 671532 673046 . + 0 ID=cds-WP_264676137.1;Parent=gene-LP088_RS03505;Dbxref=Genbank:WP_264676137.1;Name=WP_264676137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004995855.1;locus_tag=LP088_RS03505;product=aldehyde dehydrogenase;protein_id=WP_264676137.1;transl_table=11 NZ_CP087814.1 RefSeq gene 673108 673593 . - . ID=gene-LP088_RS03510;Name=LP088_RS03510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03510;old_locus_tag=LP088_03500 NZ_CP087814.1 GeneMarkS-2+ CDS 673108 673593 . - 0 ID=cds-WP_078273358.1;Parent=gene-LP088_RS03510;Dbxref=Genbank:WP_078273358.1;Name=WP_078273358.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS03510;product=hypothetical protein;protein_id=WP_078273358.1;transl_table=11 NZ_CP087814.1 RefSeq gene 673678 673929 . - . ID=gene-LP088_RS03515;Name=LP088_RS03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03515;old_locus_tag=LP088_03505 NZ_CP087814.1 GeneMarkS-2+ CDS 673678 673929 . - 0 ID=cds-WP_264676138.1;Parent=gene-LP088_RS03515;Dbxref=Genbank:WP_264676138.1;Name=WP_264676138.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS03515;product=hypothetical protein;protein_id=WP_264676138.1;transl_table=11 NZ_CP087814.1 RefSeq gene 674013 674624 . - . ID=gene-LP088_RS03520;Name=LP088_RS03520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03520;old_locus_tag=LP088_03510 NZ_CP087814.1 Protein Homology CDS 674013 674624 . - 0 ID=cds-WP_112741925.1;Parent=gene-LP088_RS03520;Dbxref=Genbank:WP_112741925.1;Name=WP_112741925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007116139.1;locus_tag=LP088_RS03520;product=rhomboid family intramembrane serine protease;protein_id=WP_112741925.1;transl_table=11 NZ_CP087814.1 RefSeq gene 674786 677011 . - . ID=gene-LP088_RS03525;Name=LP088_RS03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03525;old_locus_tag=LP088_03515 NZ_CP087814.1 Protein Homology CDS 674786 677011 . - 0 ID=cds-WP_078273355.1;Parent=gene-LP088_RS03525;Dbxref=Genbank:WP_078273355.1;Name=WP_078273355.1;Ontology_term=GO:0006099,GO:0004450;gbkey=CDS;go_function=isocitrate dehydrogenase (NADP+) activity|0004450||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003665846.1;locus_tag=LP088_RS03525;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_078273355.1;transl_table=11 NZ_CP087814.1 RefSeq gene 677198 677323 . - . ID=gene-LP088_RS03530;Name=LP088_RS03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03530;old_locus_tag=LP088_03520 NZ_CP087814.1 GeneMarkS-2+ CDS 677198 677323 . - 0 ID=cds-WP_162860357.1;Parent=gene-LP088_RS03530;Dbxref=Genbank:WP_162860357.1;Name=WP_162860357.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS03530;product=TfoX/Sxy family protein;protein_id=WP_162860357.1;transl_table=11 NZ_CP087814.1 RefSeq gene 677817 679004 . + . ID=gene-LP088_RS03535;Name=LP088_RS03535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03535;old_locus_tag=LP088_03525 NZ_CP087814.1 Protein Homology CDS 677817 679004 . + 0 ID=cds-WP_078273352.1;Parent=gene-LP088_RS03535;Dbxref=Genbank:WP_078273352.1;Name=WP_078273352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657742.1;locus_tag=LP088_RS03535;product=acetate kinase;protein_id=WP_078273352.1;transl_table=11 NZ_CP087814.1 RefSeq gene 679107 680567 . + . ID=gene-LP088_RS03540;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=LP088_RS03540;old_locus_tag=LP088_03530 NZ_CP087814.1 Protein Homology CDS 679107 680567 . + 0 ID=cds-WP_078273351.1;Parent=gene-LP088_RS03540;Dbxref=Genbank:WP_078273351.1;Name=WP_078273351.1;Ontology_term=GO:0016407;gbkey=CDS;gene=pta;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003670874.1;locus_tag=LP088_RS03540;product=phosphate acetyltransferase;protein_id=WP_078273351.1;transl_table=11 NZ_CP087814.1 RefSeq gene 680876 681154 . + . ID=gene-LP088_RS03545;Name=LP088_RS03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03545;old_locus_tag=LP088_03535 NZ_CP087814.1 Protein Homology CDS 680876 681154 . + 0 ID=cds-WP_078273350.1;Parent=gene-LP088_RS03545;Dbxref=Genbank:WP_078273350.1;Name=WP_078273350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003674273.1;locus_tag=LP088_RS03545;product=PspC domain-containing protein;protein_id=WP_078273350.1;transl_table=11 NZ_CP087814.1 RefSeq gene 681286 682326 . + . ID=gene-LP088_RS03550;Name=LP088_RS03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03550;old_locus_tag=LP088_03540 NZ_CP087814.1 Protein Homology CDS 681286 682326 . + 0 ID=cds-WP_112742792.1;Parent=gene-LP088_RS03550;Dbxref=Genbank:WP_112742792.1;Name=WP_112742792.1;Ontology_term=GO:0000910,GO:0007059,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cytokinesis|0000910||IEA,chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519664.1;locus_tag=LP088_RS03550;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_112742792.1;transl_table=11 NZ_CP087814.1 RefSeq gene 682361 683023 . + . ID=gene-LP088_RS03555;Name=LP088_RS03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03555;old_locus_tag=LP088_03545 NZ_CP087814.1 Protein Homology CDS 682361 683023 . + 0 ID=cds-WP_078273349.1;Parent=gene-LP088_RS03555;Dbxref=Genbank:WP_078273349.1;Name=WP_078273349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280590.1;locus_tag=LP088_RS03555;product=MotA/TolQ/ExbB proton channel family protein;protein_id=WP_078273349.1;transl_table=11 NZ_CP087814.1 RefSeq gene 683060 683491 . + . ID=gene-LP088_RS03560;Name=LP088_RS03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03560;old_locus_tag=LP088_03550 NZ_CP087814.1 Protein Homology CDS 683060 683491 . + 0 ID=cds-WP_078273348.1;Parent=gene-LP088_RS03560;Dbxref=Genbank:WP_078273348.1;Name=WP_078273348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009501676.1;locus_tag=LP088_RS03560;product=biopolymer transporter ExbD;protein_id=WP_078273348.1;transl_table=11 NZ_CP087814.1 RefSeq gene 683561 685339 . + . ID=gene-LP088_RS03565;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=LP088_RS03565;old_locus_tag=LP088_03555 NZ_CP087814.1 Protein Homology CDS 683561 685339 . + 0 ID=cds-WP_112742793.1;Parent=gene-LP088_RS03565;Dbxref=Genbank:WP_112742793.1;Name=WP_112742793.1;Ontology_term=GO:0006869,GO:0005319;gbkey=CDS;gene=msbA;go_function=lipid transporter activity|0005319||IEA;go_process=lipid transport|0006869||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001070730.1;locus_tag=LP088_RS03565;product=lipid A export permease/ATP-binding protein MsbA;protein_id=WP_112742793.1;transl_table=11 NZ_CP087814.1 RefSeq gene 685336 686364 . + . ID=gene-LP088_RS03570;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=LP088_RS03570;old_locus_tag=LP088_03560 NZ_CP087814.1 Protein Homology CDS 685336 686364 . + 0 ID=cds-WP_078273346.1;Parent=gene-LP088_RS03570;Dbxref=Genbank:WP_078273346.1;Name=WP_078273346.1;Ontology_term=GO:0009245,GO:0009029;gbkey=CDS;gene=lpxK;go_function=tetraacyldisaccharide 4'-kinase activity|0009029||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003669746.1;locus_tag=LP088_RS03570;product=tetraacyldisaccharide 4'-kinase;protein_id=WP_078273346.1;transl_table=11 NZ_CP087814.1 RefSeq gene 686399 686911 . - . ID=gene-LP088_RS03575;Name=LP088_RS03575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03575;old_locus_tag=LP088_03565 NZ_CP087814.1 Protein Homology CDS 686399 686911 . - 0 ID=cds-WP_158079597.1;Parent=gene-LP088_RS03575;Dbxref=Genbank:WP_158079597.1;Name=WP_158079597.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026253.2;locus_tag=LP088_RS03575;product=WG repeat-containing protein;protein_id=WP_158079597.1;transl_table=11 NZ_CP087814.1 RefSeq gene 687165 687932 . + . ID=gene-LP088_RS03580;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=LP088_RS03580;old_locus_tag=LP088_03570 NZ_CP087814.1 Protein Homology CDS 687165 687932 . + 0 ID=cds-WP_078273344.1;Parent=gene-LP088_RS03580;Dbxref=Genbank:WP_078273344.1;Name=WP_078273344.1;Ontology_term=GO:0009244,GO:0008690;gbkey=CDS;gene=kdsB;go_function=3-deoxy-manno-octulosonate cytidylyltransferase activity|0008690||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443271.1;locus_tag=LP088_RS03580;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_078273344.1;transl_table=11 NZ_CP087814.1 RefSeq gene 687934 688944 . + . ID=gene-LP088_RS03585;Name=LP088_RS03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03585;old_locus_tag=LP088_03575 NZ_CP087814.1 Protein Homology CDS 687934 688944 . + 0 ID=cds-WP_078273343.1;Parent=gene-LP088_RS03585;Dbxref=Genbank:WP_078273343.1;Name=WP_078273343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003673082.1;locus_tag=LP088_RS03585;product=DNA polymerase III subunit;protein_id=WP_078273343.1;transl_table=11 NZ_CP087814.1 RefSeq gene 689099 689980 . + . ID=gene-LP088_RS03590;Name=LP088_RS03590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03590;old_locus_tag=LP088_03580 NZ_CP087814.1 Protein Homology CDS 689099 689980 . + 0 ID=cds-WP_158079596.1;Parent=gene-LP088_RS03590;Dbxref=Genbank:WP_158079596.1;Name=WP_158079596.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021541.2;locus_tag=LP088_RS03590;product=DUF2272 domain-containing protein;protein_id=WP_158079596.1;transl_table=11 NZ_CP087814.1 RefSeq gene 690046 690222 . - . ID=gene-LP088_RS03595;Name=LP088_RS03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03595;old_locus_tag=LP088_03585 NZ_CP087814.1 GeneMarkS-2+ CDS 690046 690222 . - 0 ID=cds-WP_158079595.1;Parent=gene-LP088_RS03595;Dbxref=Genbank:WP_158079595.1;Name=WP_158079595.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS03595;product=hypothetical protein;protein_id=WP_158079595.1;transl_table=11 NZ_CP087814.1 RefSeq gene 690231 690509 . - . ID=gene-LP088_RS03600;Name=LP088_RS03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03600;old_locus_tag=LP088_03590 NZ_CP087814.1 Protein Homology CDS 690231 690509 . - 0 ID=cds-WP_065255417.1;Parent=gene-LP088_RS03600;Dbxref=Genbank:WP_065255417.1;Name=WP_065255417.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019671617.1;locus_tag=LP088_RS03600;product=putative addiction module antidote protein;protein_id=WP_065255417.1;transl_table=11 NZ_CP087814.1 RefSeq gene 690512 690805 . - . ID=gene-LP088_RS03605;Name=LP088_RS03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03605;old_locus_tag=LP088_03595 NZ_CP087814.1 GeneMarkS-2+ CDS 690512 690805 . - 0 ID=cds-WP_228157783.1;Parent=gene-LP088_RS03605;Dbxref=Genbank:WP_228157783.1;Name=WP_228157783.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS03605;product=hypothetical protein;protein_id=WP_228157783.1;transl_table=11 NZ_CP087814.1 RefSeq gene 690955 692067 . + . ID=gene-LP088_RS03610;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=LP088_RS03610;old_locus_tag=LP088_03600 NZ_CP087814.1 Protein Homology CDS 690955 692067 . + 0 ID=cds-WP_115369443.1;Parent=gene-LP088_RS03610;Dbxref=Genbank:WP_115369443.1;Name=WP_115369443.1;Ontology_term=GO:0009094,GO:0004664;gbkey=CDS;gene=pheA;go_function=prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201981.1;locus_tag=LP088_RS03610;product=prephenate dehydratase;protein_id=WP_115369443.1;transl_table=11 NZ_CP087814.1 RefSeq gene 692064 692369 . + . ID=gene-LP088_RS03615;Name=LP088_RS03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03615;old_locus_tag=LP088_03605 NZ_CP087814.1 GeneMarkS-2+ CDS 692064 692369 . + 0 ID=cds-WP_112741927.1;Parent=gene-LP088_RS03615;Dbxref=Genbank:WP_112741927.1;Name=WP_112741927.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS03615;product=AbrB/MazE/SpoVT family DNA-binding domain-containing protein;protein_id=WP_112741927.1;transl_table=11 NZ_CP087814.1 RefSeq gene 692366 692797 . + . ID=gene-LP088_RS03620;Name=LP088_RS03620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03620;old_locus_tag=LP088_03610 NZ_CP087814.1 Protein Homology CDS 692366 692797 . + 0 ID=cds-WP_112741928.1;Parent=gene-LP088_RS03620;Dbxref=Genbank:WP_112741928.1;Name=WP_112741928.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013970.2;locus_tag=LP088_RS03620;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_112741928.1;transl_table=11 NZ_CP087814.1 RefSeq gene 692790 693710 . + . ID=gene-LP088_RS03625;Name=LP088_RS03625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03625;old_locus_tag=LP088_03615 NZ_CP087814.1 Protein Homology CDS 692790 693710 . + 0 ID=cds-WP_264676139.1;Parent=gene-LP088_RS03625;Dbxref=Genbank:WP_264676139.1;Name=WP_264676139.1;Ontology_term=GO:0006571,GO:0004665,GO:0008977;gbkey=CDS;go_function=prephenate dehydrogenase (NADP+) activity|0004665||IEA,prephenate dehydrogenase (NAD+) activity|0008977||IEA;go_process=tyrosine biosynthetic process|0006571||IEA;inference=COORDINATES: protein motif:HMM:NF014234.2;locus_tag=LP088_RS03625;product=prephenate dehydrogenase/arogenate dehydrogenase family protein;protein_id=WP_264676139.1;transl_table=11 NZ_CP087814.1 RefSeq gene 693748 694110 . - . ID=gene-LP088_RS03630;Name=LP088_RS03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03630;old_locus_tag=LP088_03620 NZ_CP087814.1 Protein Homology CDS 693748 694110 . - 0 ID=cds-WP_264676140.1;Parent=gene-LP088_RS03630;Dbxref=Genbank:WP_264676140.1;Name=WP_264676140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019518956.1;locus_tag=LP088_RS03630;product=hypothetical protein;protein_id=WP_264676140.1;transl_table=11 NZ_CP087814.1 RefSeq gene 694140 695054 . - . ID=gene-LP088_RS03635;Name=LP088_RS03635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03635;old_locus_tag=LP088_03625 NZ_CP087814.1 GeneMarkS-2+ CDS 694140 695054 . - 0 ID=cds-WP_264676141.1;Parent=gene-LP088_RS03635;Dbxref=Genbank:WP_264676141.1;Name=WP_264676141.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS03635;product=hypothetical protein;protein_id=WP_264676141.1;transl_table=11 NZ_CP087814.1 RefSeq gene 695075 695380 . - . ID=gene-LP088_RS03640;Name=LP088_RS03640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03640;old_locus_tag=LP088_03630 NZ_CP087814.1 GeneMarkS-2+ CDS 695075 695380 . - 0 ID=cds-WP_264676142.1;Parent=gene-LP088_RS03640;Dbxref=Genbank:WP_264676142.1;Name=WP_264676142.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS03640;product=hypothetical protein;protein_id=WP_264676142.1;transl_table=11 NZ_CP087814.1 RefSeq gene 695476 695841 . + . ID=gene-LP088_RS03645;Name=LP088_RS03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03645;old_locus_tag=LP088_03635 NZ_CP087814.1 Protein Homology CDS 695476 695841 . + 0 ID=cds-WP_264676143.1;Parent=gene-LP088_RS03645;Dbxref=Genbank:WP_264676143.1;Name=WP_264676143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520500.1;locus_tag=LP088_RS03645;product=helix-turn-helix domain-containing protein;protein_id=WP_264676143.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 695951 697252 . + . ID=gene-LP088_RS03650;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=pseudogene;locus_tag=LP088_RS03650;old_locus_tag=LP088_03640;partial=true;pseudo=true;start_range=.,695951 NZ_CP087814.1 Protein Homology CDS 695951 697252 . + 0 ID=cds-LP088_RS03650;Parent=gene-LP088_RS03650;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009423,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004799287.1;locus_tag=LP088_RS03650;partial=true;product=3-phosphoshikimate 1-carboxyvinyltransferase;pseudo=true;start_range=.,695951;transl_table=11 NZ_CP087814.1 RefSeq gene 697261 697533 . + . ID=gene-LP088_RS03655;Name=LP088_RS03655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03655;old_locus_tag=LP088_03645 NZ_CP087814.1 GeneMarkS-2+ CDS 697261 697533 . + 0 ID=cds-WP_078273335.1;Parent=gene-LP088_RS03655;Dbxref=Genbank:WP_078273335.1;Name=WP_078273335.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS03655;product=hypothetical protein;protein_id=WP_078273335.1;transl_table=11 NZ_CP087814.1 RefSeq gene 697542 697925 . + . ID=gene-LP088_RS03660;Name=LP088_RS03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03660;old_locus_tag=LP088_03650 NZ_CP087814.1 Protein Homology CDS 697542 697925 . + 0 ID=cds-WP_162860360.1;Parent=gene-LP088_RS03660;Dbxref=Genbank:WP_162860360.1;Name=WP_162860360.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013970.2;locus_tag=LP088_RS03660;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_162860360.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 697932 698823 . + . ID=gene-LP088_RS03665;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=pseudogene;locus_tag=LP088_RS03665;old_locus_tag=LP088_03655;pseudo=true NZ_CP087814.1 Protein Homology CDS 697932 698823 . + 0 ID=cds-LP088_RS03665;Parent=gene-LP088_RS03665;Note=frameshifted;Ontology_term=GO:0006810,GO:0005215,GO:0005886;gbkey=CDS;gene=rarD;go_component=plasma membrane|0005886||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019518963.1;locus_tag=LP088_RS03665;product=EamA family transporter RarD;pseudo=true;transl_table=11 NZ_CP087814.1 RefSeq gene 698929 699288 . + . ID=gene-LP088_RS03670;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=LP088_RS03670;old_locus_tag=LP088_03660 NZ_CP087814.1 Protein Homology CDS 698929 699288 . + 0 ID=cds-WP_112741935.1;Parent=gene-LP088_RS03670;Dbxref=Genbank:WP_112741935.1;Name=WP_112741935.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003658249.1;locus_tag=LP088_RS03670;product=dihydroneopterin aldolase;protein_id=WP_112741935.1;transl_table=11 NZ_CP087814.1 RefSeq gene 699304 699741 . + . ID=gene-LP088_RS03675;Name=LP088_RS03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03675;old_locus_tag=LP088_03665 NZ_CP087814.1 Protein Homology CDS 699304 699741 . + 0 ID=cds-WP_078273333.1;Parent=gene-LP088_RS03675;Dbxref=Genbank:WP_078273333.1;Name=WP_078273333.1;Ontology_term=GO:0009396,GO:0003848;gbkey=CDS;go_function=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity|0003848||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: protein motif:HMM:NF013456.2;locus_tag=LP088_RS03675;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_078273333.1;transl_table=11 NZ_CP087814.1 RefSeq gene 699852 701147 . - . ID=gene-LP088_RS03680;Name=LP088_RS03680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03680;old_locus_tag=LP088_03670 NZ_CP087814.1 Protein Homology CDS 699852 701147 . - 0 ID=cds-WP_112741936.1;Parent=gene-LP088_RS03680;Dbxref=Genbank:WP_112741936.1;Name=WP_112741936.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022518.2;locus_tag=LP088_RS03680;product=DUF2868 domain-containing protein;protein_id=WP_112741936.1;transl_table=11 NZ_CP087814.1 RefSeq gene 701167 701994 . - . ID=gene-LP088_RS03685;Name=LP088_RS03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03685;old_locus_tag=LP088_03675 NZ_CP087814.1 Protein Homology CDS 701167 701994 . - 0 ID=cds-WP_112741937.1;Parent=gene-LP088_RS03685;Dbxref=Genbank:WP_112741937.1;Name=WP_112741937.1;Ontology_term=GO:0022900,GO:0009055,GO:0051536;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520735.1;locus_tag=LP088_RS03685;product=RnfABCDGE type electron transport complex subunit B;protein_id=WP_112741937.1;transl_table=11 NZ_CP087814.1 RefSeq gene 702165 703247 . + . ID=gene-LP088_RS03690;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=LP088_RS03690;old_locus_tag=LP088_03680 NZ_CP087814.1 Protein Homology CDS 702165 703247 . + 0 ID=cds-WP_264676144.1;Parent=gene-LP088_RS03690;Dbxref=Genbank:WP_264676144.1;Name=WP_264676144.1;Ontology_term=GO:0006592,GO:0003942;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019837305.1;locus_tag=LP088_RS03690;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_264676144.1;transl_table=11 NZ_CP087814.1 RefSeq gene 703359 703571 . + . ID=gene-LP088_RS03695;Name=LP088_RS03695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03695;old_locus_tag=LP088_03685 NZ_CP087814.1 Protein Homology CDS 703359 703571 . + 0 ID=cds-WP_115369452.1;Parent=gene-LP088_RS03695;Dbxref=Genbank:WP_115369452.1;Name=WP_115369452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007116106.1;locus_tag=LP088_RS03695;product=cation transporter;protein_id=WP_115369452.1;transl_table=11 NZ_CP087814.1 RefSeq gene 703651 704265 . - . ID=gene-LP088_RS03700;Name=LP088_RS03700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03700;old_locus_tag=LP088_03690 NZ_CP087814.1 Protein Homology CDS 703651 704265 . - 0 ID=cds-WP_264676145.1;Parent=gene-LP088_RS03700;Dbxref=Genbank:WP_264676145.1;Name=WP_264676145.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012521.2;locus_tag=LP088_RS03700;product=histidine phosphatase family protein;protein_id=WP_264676145.1;transl_table=11 NZ_CP087814.1 RefSeq gene 704330 705325 . - . ID=gene-LP088_RS03705;Name=LP088_RS03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03705;old_locus_tag=LP088_03695 NZ_CP087814.1 Protein Homology CDS 704330 705325 . - 0 ID=cds-WP_078273328.1;Parent=gene-LP088_RS03705;Dbxref=Genbank:WP_078273328.1;Name=WP_078273328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019671805.1;locus_tag=LP088_RS03705;product=adenosine kinase;protein_id=WP_078273328.1;transl_table=11 NZ_CP087814.1 RefSeq gene 705459 706646 . + . ID=gene-LP088_RS03710;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=protein_coding;locus_tag=LP088_RS03710;old_locus_tag=LP088_03700 NZ_CP087814.1 Protein Homology CDS 705459 706646 . + 0 ID=cds-WP_264690413.1;Parent=gene-LP088_RS03710;Dbxref=Genbank:WP_264690413.1;Name=WP_264690413.1;Ontology_term=GO:0031167,GO:0008757,GO:0016433;gbkey=CDS;gene=rlmN;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,rRNA (adenine) methyltransferase activity|0016433||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279965.1;locus_tag=LP088_RS03710;product=23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN;protein_id=WP_264690413.1;transl_table=11 NZ_CP087814.1 RefSeq gene 706866 707693 . + . ID=gene-LP088_RS03715;Name=pilW;gbkey=Gene;gene=pilW;gene_biotype=protein_coding;locus_tag=LP088_RS03715;old_locus_tag=LP088_03705 NZ_CP087814.1 Protein Homology CDS 706866 707693 . + 0 ID=cds-WP_115369455.1;Parent=gene-LP088_RS03715;Dbxref=Genbank:WP_115369455.1;Name=WP_115369455.1;Ontology_term=GO:0005515;gbkey=CDS;gene=pilW;go_function=protein binding|0005515||IEA;inference=COORDINATES: protein motif:HMM:TIGR02521.1;locus_tag=LP088_RS03715;product=type IV pilus biogenesis/stability protein PilW;protein_id=WP_115369455.1;transl_table=11 NZ_CP087814.1 RefSeq gene 707690 708499 . + . ID=gene-LP088_RS03720;Name=LP088_RS03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03720;old_locus_tag=LP088_03710 NZ_CP087814.1 Protein Homology CDS 707690 708499 . + 0 ID=cds-WP_115369456.1;Parent=gene-LP088_RS03720;Dbxref=Genbank:WP_115369456.1;Name=WP_115369456.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024855.2;locus_tag=LP088_RS03720;product=helix-turn-helix domain-containing protein;protein_id=WP_115369456.1;transl_table=11 NZ_CP087814.1 RefSeq gene 708510 709628 . + . ID=gene-LP088_RS03725;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=LP088_RS03725;old_locus_tag=LP088_03715 NZ_CP087814.1 Protein Homology CDS 708510 709628 . + 0 ID=cds-WP_078273324.1;Parent=gene-LP088_RS03725;Dbxref=Genbank:WP_078273324.1;Name=WP_078273324.1;Ontology_term=GO:0044237,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity|0046429||IEA;go_process=cellular metabolic process|0044237||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279968.1;locus_tag=LP088_RS03725;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WP_078273324.1;transl_table=11 NZ_CP087814.1 RefSeq gene 709764 710435 . + . ID=gene-LP088_RS03730;Name=LP088_RS03730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03730;old_locus_tag=LP088_03720 NZ_CP087814.1 GeneMarkS-2+ CDS 709764 710435 . + 0 ID=cds-WP_078273323.1;Parent=gene-LP088_RS03730;Dbxref=Genbank:WP_078273323.1;Name=WP_078273323.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS03730;product=YceI family protein;protein_id=WP_078273323.1;transl_table=11 NZ_CP087814.1 RefSeq gene 710618 711454 . + . ID=gene-LP088_RS03735;Name=LP088_RS03735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03735;old_locus_tag=LP088_03725 NZ_CP087814.1 Protein Homology CDS 710618 711454 . + 0 ID=cds-WP_078273322.1;Parent=gene-LP088_RS03735;Dbxref=Genbank:WP_078273322.1;Name=WP_078273322.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012707.2;locus_tag=LP088_RS03735;product=transporter substrate-binding domain-containing protein;protein_id=WP_078273322.1;transl_table=11 NZ_CP087814.1 RefSeq gene 711658 712935 . + . ID=gene-LP088_RS03740;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=LP088_RS03740;old_locus_tag=LP088_03730 NZ_CP087814.1 Protein Homology CDS 711658 712935 . + 0 ID=cds-WP_078273321.1;Parent=gene-LP088_RS03740;Dbxref=Genbank:WP_078273321.1;Name=WP_078273321.1;Ontology_term=GO:0006427,GO:0004821,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003666485.1;locus_tag=LP088_RS03740;product=histidine--tRNA ligase;protein_id=WP_078273321.1;transl_table=11 NZ_CP087814.1 RefSeq gene 713022 713825 . + . ID=gene-LP088_RS03745;Name=LP088_RS03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03745;old_locus_tag=LP088_03735 NZ_CP087814.1 Protein Homology CDS 713022 713825 . + 0 ID=cds-WP_078273320.1;Parent=gene-LP088_RS03745;Dbxref=Genbank:WP_078273320.1;Name=WP_078273320.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021492.2;locus_tag=LP088_RS03745;product=tetratricopeptide repeat protein;protein_id=WP_078273320.1;transl_table=11 NZ_CP087814.1 RefSeq gene 714108 715286 . + . ID=gene-LP088_RS03750;Name=bamB;gbkey=Gene;gene=bamB;gene_biotype=protein_coding;locus_tag=LP088_RS03750;old_locus_tag=LP088_03740 NZ_CP087814.1 Protein Homology CDS 714108 715286 . + 0 ID=cds-WP_112741939.1;Parent=gene-LP088_RS03750;Dbxref=Genbank:WP_112741939.1;Name=WP_112741939.1;Ontology_term=GO:0005515,GO:0009279;gbkey=CDS;gene=bamB;go_component=cell outer membrane|0009279||IEA;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513005.1;locus_tag=LP088_RS03750;product=outer membrane protein assembly factor BamB;protein_id=WP_112741939.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 715339 715900 . - . ID=gene-LP088_RS03755;Name=LP088_RS03755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS03755;old_locus_tag=LP088_03745;pseudo=true NZ_CP087814.1 Protein Homology CDS 715339 715900 . - 0 ID=cds-LP088_RS03755;Parent=gene-LP088_RS03755;Note=frameshifted;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011959554.1;locus_tag=LP088_RS03755;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_CP087814.1 RefSeq gene 716035 716667 . - . ID=gene-LP088_RS03760;Name=LP088_RS03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03760;old_locus_tag=LP088_03750 NZ_CP087814.1 Protein Homology CDS 716035 716667 . - 0 ID=cds-WP_112741940.1;Parent=gene-LP088_RS03760;Dbxref=Genbank:WP_112741940.1;Name=WP_112741940.1;Ontology_term=GO:0008410;gbkey=CDS;go_function=CoA-transferase activity|0008410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009767011.1;locus_tag=LP088_RS03760;product=3-oxoacid CoA-transferase subunit B;protein_id=WP_112741940.1;transl_table=11 NZ_CP087814.1 RefSeq gene 716677 717381 . - . ID=gene-LP088_RS03765;Name=LP088_RS03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03765;old_locus_tag=LP088_03755 NZ_CP087814.1 Protein Homology CDS 716677 717381 . - 0 ID=cds-WP_220271867.1;Parent=gene-LP088_RS03765;Dbxref=Genbank:WP_220271867.1;Name=WP_220271867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004971542.1;locus_tag=LP088_RS03765;product=CoA transferase subunit A;protein_id=WP_220271867.1;transl_table=11 NZ_CP087814.1 RefSeq gene 717410 718198 . - . ID=gene-LP088_RS03770;Name=LP088_RS03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03770;old_locus_tag=LP088_03760 NZ_CP087814.1 Protein Homology CDS 717410 718198 . - 0 ID=cds-WP_112741942.1;Parent=gene-LP088_RS03770;Dbxref=Genbank:WP_112741942.1;Name=WP_112741942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007116321.1;locus_tag=LP088_RS03770;product=3-hydroxybutyrate dehydrogenase;protein_id=WP_112741942.1;transl_table=11 NZ_CP087814.1 RefSeq gene 718221 719603 . - . ID=gene-LP088_RS03775;Name=LP088_RS03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03775;old_locus_tag=LP088_03765 NZ_CP087814.1 Protein Homology CDS 718221 719603 . - 0 ID=cds-WP_112741943.1;Parent=gene-LP088_RS03775;Dbxref=Genbank:WP_112741943.1;Name=WP_112741943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443731.1;locus_tag=LP088_RS03775;product=GntP family permease;protein_id=WP_112741943.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 719708 720882 . - . ID=gene-LP088_RS03780;Name=LP088_RS03780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS03780;old_locus_tag=LP088_03770;pseudo=true NZ_CP087814.1 Protein Homology CDS 719708 720882 . - 0 ID=cds-LP088_RS03780;Parent=gene-LP088_RS03780;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004863734.1;locus_tag=LP088_RS03780;product=thiolase family protein;pseudo=true;transl_table=11 NZ_CP087814.1 RefSeq gene 720911 722248 . - . ID=gene-LP088_RS03785;Name=LP088_RS03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03785;old_locus_tag=LP088_03775 NZ_CP087814.1 Protein Homology CDS 720911 722248 . - 0 ID=cds-WP_112741944.1;Parent=gene-LP088_RS03785;Dbxref=Genbank:WP_112741944.1;Name=WP_112741944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011960925.1;locus_tag=LP088_RS03785;product=TIGR00366 family protein;protein_id=WP_112741944.1;transl_table=11 NZ_CP087814.1 RefSeq gene 722537 723214 . + . ID=gene-LP088_RS03790;Name=LP088_RS03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03790;old_locus_tag=LP088_03780 NZ_CP087814.1 Protein Homology CDS 722537 723214 . + 0 ID=cds-WP_264676328.1;Parent=gene-LP088_RS03790;Dbxref=Genbank:WP_264676328.1;Name=WP_264676328.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033564.0;locus_tag=LP088_RS03790;product=ISAs1 family transposase;protein_id=WP_264676328.1;transl_table=11 NZ_CP087814.1 RefSeq gene 723216 723413 . + . ID=gene-LP088_RS03795;Name=LP088_RS03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03795;old_locus_tag=LP088_03785 NZ_CP087814.1 GeneMarkS-2+ CDS 723216 723413 . + 0 ID=cds-WP_078274757.1;Parent=gene-LP088_RS03795;Dbxref=Genbank:WP_078274757.1;Name=WP_078274757.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS03795;product=hypothetical protein;protein_id=WP_078274757.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 723477 724112 . - . ID=gene-LP088_RS03800;Name=maiA;gbkey=Gene;gene=maiA;gene_biotype=pseudogene;locus_tag=LP088_RS03800;old_locus_tag=LP088_03790;pseudo=true NZ_CP087814.1 Protein Homology CDS 723477 724112 . - 0 ID=cds-LP088_RS03800;Parent=gene-LP088_RS03800;Note=internal stop;Ontology_term=GO:0006559,GO:0006572,GO:0016034;gbkey=CDS;gene=maiA;go_function=maleylacetoacetate isomerase activity|0016034||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA,tyrosine catabolic process|0006572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000781242.1;locus_tag=LP088_RS03800;product=maleylacetoacetate isomerase;pseudo=true;transl_table=11 NZ_CP087814.1 RefSeq gene 724112 725533 . - . ID=gene-LP088_RS03805;Name=LP088_RS03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03805;old_locus_tag=LP088_03795 NZ_CP087814.1 Protein Homology CDS 724112 725533 . - 0 ID=cds-WP_112741946.1;Parent=gene-LP088_RS03805;Dbxref=Genbank:WP_112741946.1;Name=WP_112741946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003658050.1;locus_tag=LP088_RS03805;product=Na+/H+ antiporter NhaC;protein_id=WP_112741946.1;transl_table=11 NZ_CP087814.1 RefSeq gene 725698 727116 . + . ID=gene-LP088_RS03810;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=LP088_RS03810;old_locus_tag=LP088_03800 NZ_CP087814.1 Protein Homology CDS 725698 727116 . + 0 ID=cds-WP_112741947.1;Parent=gene-LP088_RS03810;Dbxref=Genbank:WP_112741947.1;Name=WP_112741947.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279972.1;locus_tag=LP088_RS03810;product=ribosome biogenesis GTPase Der;protein_id=WP_112741947.1;transl_table=11 NZ_CP087814.1 RefSeq gene 727116 727418 . + . ID=gene-LP088_RS03815;Name=LP088_RS03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03815;old_locus_tag=LP088_03805 NZ_CP087814.1 Protein Homology CDS 727116 727418 . + 0 ID=cds-WP_112741948.1;Parent=gene-LP088_RS03815;Dbxref=Genbank:WP_112741948.1;Name=WP_112741948.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016268.2;locus_tag=LP088_RS03815;product=BrnT family toxin;protein_id=WP_112741948.1;transl_table=11 NZ_CP087814.1 RefSeq gene 727408 727653 . + . ID=gene-LP088_RS03820;Name=LP088_RS03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03820;old_locus_tag=LP088_03810 NZ_CP087814.1 GeneMarkS-2+ CDS 727408 727653 . + 0 ID=cds-WP_112741949.1;Parent=gene-LP088_RS03820;Dbxref=Genbank:WP_112741949.1;Name=WP_112741949.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS03820;product=hypothetical protein;protein_id=WP_112741949.1;transl_table=11 NZ_CP087814.1 RefSeq gene 727668 728429 . + . ID=gene-LP088_RS03825;Name=LP088_RS03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03825;old_locus_tag=LP088_03815 NZ_CP087814.1 Protein Homology CDS 727668 728429 . + 0 ID=cds-WP_112741950.1;Parent=gene-LP088_RS03825;Dbxref=Genbank:WP_112741950.1;Name=WP_112741950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004978976.1;locus_tag=LP088_RS03825;product=hypothetical protein;protein_id=WP_112741950.1;transl_table=11 NZ_CP087814.1 RefSeq gene 728432 729022 . + . ID=gene-LP088_RS03830;Name=LP088_RS03830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03830;old_locus_tag=LP088_03820 NZ_CP087814.1 Protein Homology CDS 728432 729022 . + 0 ID=cds-WP_264683010.1;Parent=gene-LP088_RS03830;Dbxref=Genbank:WP_264683010.1;Name=WP_264683010.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013247.2;locus_tag=LP088_RS03830;product=aminotransferase class IV family protein;protein_id=WP_264683010.1;transl_table=11 NZ_CP087814.1 RefSeq gene 729746 730960 . + . ID=gene-LP088_RS03835;Name=LP088_RS03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03835;old_locus_tag=LP088_03825 NZ_CP087814.1 Protein Homology CDS 729746 730960 . + 0 ID=cds-WP_264690414.1;Parent=gene-LP088_RS03835;Dbxref=Genbank:WP_264690414.1;Name=WP_264690414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105504.1;locus_tag=LP088_RS03835;product=RtcB family protein;protein_id=WP_264690414.1;transl_table=11 NZ_CP087814.1 RefSeq gene 731112 731327 . + . ID=gene-LP088_RS03840;Name=LP088_RS03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03840;old_locus_tag=LP088_03830 NZ_CP087814.1 Protein Homology CDS 731112 731327 . + 0 ID=cds-WP_051225941.1;Parent=gene-LP088_RS03840;Dbxref=Genbank:WP_051225941.1;Name=WP_051225941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004992481.1;locus_tag=LP088_RS03840;product=hypothetical protein;protein_id=WP_051225941.1;transl_table=11 NZ_CP087814.1 RefSeq gene 731417 731779 . + . ID=gene-LP088_RS03845;Name=LP088_RS03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03845;old_locus_tag=LP088_03835 NZ_CP087814.1 GeneMarkS-2+ CDS 731417 731779 . + 0 ID=cds-WP_078275246.1;Parent=gene-LP088_RS03845;Dbxref=Genbank:WP_078275246.1;Name=WP_078275246.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS03845;product=hypothetical protein;protein_id=WP_078275246.1;transl_table=11 NZ_CP087814.1 RefSeq gene 731872 733188 . + . ID=gene-LP088_RS03850;Name=LP088_RS03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03850;old_locus_tag=LP088_03840 NZ_CP087814.1 Protein Homology CDS 731872 733188 . + 0 ID=cds-WP_228157787.1;Parent=gene-LP088_RS03850;Dbxref=Genbank:WP_228157787.1;Name=WP_228157787.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003755202.1;locus_tag=LP088_RS03850;product=FAD-dependent oxidoreductase;protein_id=WP_228157787.1;transl_table=11 NZ_CP087814.1 RefSeq gene 733232 733621 . + . ID=gene-LP088_RS03855;Name=LP088_RS03855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03855;old_locus_tag=LP088_03845 NZ_CP087814.1 Protein Homology CDS 733232 733621 . + 0 ID=cds-WP_112741952.1;Parent=gene-LP088_RS03855;Dbxref=Genbank:WP_112741952.1;Name=WP_112741952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519768.1;locus_tag=LP088_RS03855;product=rhodanese-like domain-containing protein;protein_id=WP_112741952.1;transl_table=11 NZ_CP087814.1 RefSeq gene 733632 733832 . + . ID=gene-LP088_RS03860;Name=LP088_RS03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03860;old_locus_tag=LP088_03850 NZ_CP087814.1 Protein Homology CDS 733632 733832 . + 0 ID=cds-WP_046700115.1;Parent=gene-LP088_RS03860;Dbxref=Genbank:WP_046700115.1;Name=WP_046700115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003666627.1;locus_tag=LP088_RS03860;product=DUF2892 domain-containing protein;protein_id=WP_046700115.1;transl_table=11 NZ_CP087814.1 RefSeq gene 733849 734757 . + . ID=gene-LP088_RS03865;Name=LP088_RS03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03865;old_locus_tag=LP088_03855 NZ_CP087814.1 Protein Homology CDS 733849 734757 . + 0 ID=cds-WP_046701167.1;Parent=gene-LP088_RS03865;Dbxref=Genbank:WP_046701167.1;Name=WP_046701167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019673646.1;locus_tag=LP088_RS03865;product=DUF692 domain-containing protein;protein_id=WP_046701167.1;transl_table=11 NZ_CP087814.1 RefSeq gene 734793 735584 . + . ID=gene-LP088_RS03870;Name=LP088_RS03870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03870;old_locus_tag=LP088_03860 NZ_CP087814.1 Protein Homology CDS 734793 735584 . + 0 ID=cds-WP_046701166.1;Parent=gene-LP088_RS03870;Dbxref=Genbank:WP_046701166.1;Name=WP_046701166.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021364.2;locus_tag=LP088_RS03870;product=putative DNA-binding domain-containing protein;protein_id=WP_046701166.1;transl_table=11 NZ_CP087814.1 RefSeq gene 735602 736240 . + . ID=gene-LP088_RS03875;Name=LP088_RS03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03875;old_locus_tag=LP088_03865 NZ_CP087814.1 Protein Homology CDS 735602 736240 . + 0 ID=cds-WP_078275244.1;Parent=gene-LP088_RS03875;Dbxref=Genbank:WP_078275244.1;Name=WP_078275244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519010.1;locus_tag=LP088_RS03875;product=DoxX family protein;protein_id=WP_078275244.1;transl_table=11 NZ_CP087814.1 RefSeq gene 736207 736911 . + . ID=gene-LP088_RS03880;Name=LP088_RS03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03880;old_locus_tag=LP088_03870 NZ_CP087814.1 Protein Homology CDS 736207 736911 . + 0 ID=cds-WP_245952265.1;Parent=gene-LP088_RS03880;Dbxref=Genbank:WP_245952265.1;Name=WP_245952265.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:TIGR02943.1;locus_tag=LP088_RS03880;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_245952265.1;transl_table=11 NZ_CP087814.1 RefSeq gene 737126 737857 . - . ID=gene-LP088_RS03885;Name=LP088_RS03885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03885;old_locus_tag=LP088_03875 NZ_CP087814.1 Protein Homology CDS 737126 737857 . - 0 ID=cds-WP_078275241.1;Parent=gene-LP088_RS03885;Dbxref=Genbank:WP_078275241.1;Name=WP_078275241.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003662551.1;locus_tag=LP088_RS03885;product=ribonuclease HII;protein_id=WP_078275241.1;transl_table=11 NZ_CP087814.1 RefSeq gene 737926 739824 . - . ID=gene-LP088_RS03890;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;locus_tag=LP088_RS03890;old_locus_tag=LP088_03880 NZ_CP087814.1 Protein Homology CDS 737926 739824 . - 0 ID=cds-WP_078275240.1;Parent=gene-LP088_RS03890;Dbxref=Genbank:WP_078275240.1;Name=WP_078275240.1;Ontology_term=GO:0016645;gbkey=CDS;gene=mnmC;go_function=oxidoreductase activity%2C acting on the CH-NH group of donors|0016645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003668422.1;locus_tag=LP088_RS03890;product=FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;protein_id=WP_078275240.1;transl_table=11 NZ_CP087814.1 RefSeq gene 739841 740263 . - . ID=gene-LP088_RS03895;Name=LP088_RS03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03895;old_locus_tag=LP088_03885 NZ_CP087814.1 GeneMarkS-2+ CDS 739841 740263 . - 0 ID=cds-WP_078275239.1;Parent=gene-LP088_RS03895;Dbxref=Genbank:WP_078275239.1;Name=WP_078275239.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS03895;product=hypothetical protein;protein_id=WP_078275239.1;transl_table=11 NZ_CP087814.1 RefSeq gene 740272 740577 . - . ID=gene-LP088_RS03900;Name=LP088_RS03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03900;old_locus_tag=LP088_03890 NZ_CP087814.1 Protein Homology CDS 740272 740577 . - 0 ID=cds-WP_078275238.1;Parent=gene-LP088_RS03900;Dbxref=Genbank:WP_078275238.1;Name=WP_078275238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514295.1;locus_tag=LP088_RS03900;product=YciI family protein;protein_id=WP_078275238.1;transl_table=11 NZ_CP087814.1 RefSeq gene 740737 741363 . - . ID=gene-LP088_RS03905;Name=LP088_RS03905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03905;old_locus_tag=LP088_03895 NZ_CP087814.1 Protein Homology CDS 740737 741363 . - 0 ID=cds-WP_078275237.1;Parent=gene-LP088_RS03905;Dbxref=Genbank:WP_078275237.1;Name=WP_078275237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008304915.1;locus_tag=LP088_RS03905;product=septation protein IspZ;protein_id=WP_078275237.1;transl_table=11 NZ_CP087814.1 RefSeq gene 741552 742274 . + . ID=gene-LP088_RS03910;Name=truC;gbkey=Gene;gene=truC;gene_biotype=protein_coding;locus_tag=LP088_RS03910;old_locus_tag=LP088_03900 NZ_CP087814.1 Protein Homology CDS 741552 742274 . + 0 ID=cds-WP_078275236.1;Parent=gene-LP088_RS03910;Dbxref=Genbank:WP_078275236.1;Name=WP_078275236.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=truC;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003666869.1;locus_tag=LP088_RS03910;product=tRNA pseudouridine(65) synthase TruC;protein_id=WP_078275236.1;transl_table=11 NZ_CP087814.1 RefSeq gene 742656 743735 . - . ID=gene-LP088_RS03915;Name=LP088_RS03915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03915;old_locus_tag=LP088_03905 NZ_CP087814.1 Protein Homology CDS 742656 743735 . - 0 ID=cds-WP_029103111.1;Parent=gene-LP088_RS03915;Dbxref=Genbank:WP_029103111.1;Name=WP_029103111.1;Ontology_term=GO:0009423,GO:0003849;gbkey=CDS;go_function=3-deoxy-7-phosphoheptulonate synthase activity|0003849||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019518687.1;locus_tag=LP088_RS03915;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=WP_029103111.1;transl_table=11 NZ_CP087814.1 RefSeq gene 743942 744184 . + . ID=gene-LP088_RS03920;Name=LP088_RS03920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03920;old_locus_tag=LP088_03910 NZ_CP087814.1 Protein Homology CDS 743942 744184 . + 0 ID=cds-WP_078275235.1;Parent=gene-LP088_RS03920;Dbxref=Genbank:WP_078275235.1;Name=WP_078275235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000534858.1;locus_tag=LP088_RS03920;product=type II toxin-antitoxin system RelB/DinJ family antitoxin;protein_id=WP_078275235.1;transl_table=11 NZ_CP087814.1 RefSeq gene 744184 744519 . + . ID=gene-LP088_RS03925;Name=LP088_RS03925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03925;old_locus_tag=LP088_03915 NZ_CP087814.1 Protein Homology CDS 744184 744519 . + 0 ID=cds-WP_078275234.1;Parent=gene-LP088_RS03925;Dbxref=Genbank:WP_078275234.1;Name=WP_078275234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001694627.1;locus_tag=LP088_RS03925;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_078275234.1;transl_table=11 NZ_CP087814.1 RefSeq gene 744581 745576 . + . ID=gene-LP088_RS03930;Name=LP088_RS03930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03930;old_locus_tag=LP088_03920 NZ_CP087814.1 Protein Homology CDS 744581 745576 . + 0 ID=cds-WP_208624081.1;Parent=gene-LP088_RS03930;Dbxref=Genbank:WP_208624081.1;Name=WP_208624081.1;Ontology_term=GO:0008299;gbkey=CDS;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280838.1;locus_tag=LP088_RS03930;product=polyprenyl synthetase family protein;protein_id=WP_208624081.1;transl_table=11 NZ_CP087814.1 RefSeq gene 745648 745836 . + . ID=gene-LP088_RS03935;Name=LP088_RS03935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03935;old_locus_tag=LP088_03925 NZ_CP087814.1 GeneMarkS-2+ CDS 745648 745836 . + 0 ID=cds-WP_143821748.1;Parent=gene-LP088_RS03935;Dbxref=Genbank:WP_143821748.1;Name=WP_143821748.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS03935;product=hypothetical protein;protein_id=WP_143821748.1;transl_table=11 NZ_CP087814.1 RefSeq gene 745926 748070 . - . ID=gene-LP088_RS03940;Name=LP088_RS03940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03940;old_locus_tag=LP088_03930 NZ_CP087814.1 Protein Homology CDS 745926 748070 . - 0 ID=cds-WP_264676147.1;Parent=gene-LP088_RS03940;Dbxref=Genbank:WP_264676147.1;Name=WP_264676147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009767472.1;locus_tag=LP088_RS03940;product=cation-translocating P-type ATPase;protein_id=WP_264676147.1;transl_table=11 NZ_CP087814.1 RefSeq gene 748235 748819 . - . ID=gene-LP088_RS03945;Name=LP088_RS03945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03945;old_locus_tag=LP088_03935 NZ_CP087814.1 GeneMarkS-2+ CDS 748235 748819 . - 0 ID=cds-WP_112741954.1;Parent=gene-LP088_RS03945;Dbxref=Genbank:WP_112741954.1;Name=WP_112741954.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS03945;product=hypothetical protein;protein_id=WP_112741954.1;transl_table=11 NZ_CP087814.1 RefSeq gene 748979 749179 . - . ID=gene-LP088_RS03950;Name=LP088_RS03950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03950;old_locus_tag=LP088_03940 NZ_CP087814.1 GeneMarkS-2+ CDS 748979 749179 . - 0 ID=cds-WP_112741955.1;Parent=gene-LP088_RS03950;Dbxref=Genbank:WP_112741955.1;Name=WP_112741955.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS03950;product=hypothetical protein;protein_id=WP_112741955.1;transl_table=11 NZ_CP087814.1 RefSeq gene 749449 750993 . - . ID=gene-LP088_RS03955;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=LP088_RS03955;old_locus_tag=LP088_03945 NZ_CP087814.1 Protein Homology CDS 749449 750993 . - 0 ID=cds-WP_078274194.1;Parent=gene-LP088_RS03955;Dbxref=Genbank:WP_078274194.1;Name=WP_078274194.1;Ontology_term=GO:0009097,GO:0004794;gbkey=CDS;gene=ilvA;go_function=L-threonine ammonia-lyase activity|0004794||IEA;go_process=isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003659486.1;locus_tag=LP088_RS03955;product=threonine ammonia-lyase%2C biosynthetic;protein_id=WP_078274194.1;transl_table=11 NZ_CP087814.1 RefSeq gene 751013 752263 . - . ID=gene-LP088_RS03960;Name=LP088_RS03960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03960;old_locus_tag=LP088_03950 NZ_CP087814.1 Protein Homology CDS 751013 752263 . - 0 ID=cds-WP_078274193.1;Parent=gene-LP088_RS03960;Dbxref=Genbank:WP_078274193.1;Name=WP_078274193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_078274193.1;locus_tag=LP088_RS03960;product=type II restriction-modification system endonuclease;protein_id=WP_078274193.1;transl_table=11 NZ_CP087814.1 RefSeq gene 752272 753027 . - . ID=gene-LP088_RS03965;Name=LP088_RS03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03965;old_locus_tag=LP088_03955 NZ_CP087814.1 Protein Homology CDS 752272 753027 . - 0 ID=cds-WP_245952267.1;Parent=gene-LP088_RS03965;Dbxref=Genbank:WP_245952267.1;Name=WP_245952267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009501218.1;locus_tag=LP088_RS03965;product=DNA methyltransferase;protein_id=WP_245952267.1;transl_table=11 NZ_CP087814.1 RefSeq gene 753059 753712 . - . ID=gene-LP088_RS03970;Name=LP088_RS03970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03970;old_locus_tag=LP088_03960 NZ_CP087814.1 GeneMarkS-2+ CDS 753059 753712 . - 0 ID=cds-WP_112741958.1;Parent=gene-LP088_RS03970;Dbxref=Genbank:WP_112741958.1;Name=WP_112741958.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS03970;product=hypothetical protein;protein_id=WP_112741958.1;transl_table=11 NZ_CP087814.1 RefSeq gene 753739 754527 . - . ID=gene-LP088_RS03975;Name=LP088_RS03975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03975;old_locus_tag=LP088_03965 NZ_CP087814.1 Protein Homology CDS 753739 754527 . - 0 ID=cds-WP_112742798.1;Parent=gene-LP088_RS03975;Dbxref=Genbank:WP_112742798.1;Name=WP_112742798.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013704.2;locus_tag=LP088_RS03975;product=site-specific DNA-methyltransferase;protein_id=WP_112742798.1;transl_table=11 NZ_CP087814.1 RefSeq gene 754772 755071 . - . ID=gene-LP088_RS03980;Name=LP088_RS03980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03980;old_locus_tag=LP088_03970 NZ_CP087814.1 GeneMarkS-2+ CDS 754772 755071 . - 0 ID=cds-WP_112741959.1;Parent=gene-LP088_RS03980;Dbxref=Genbank:WP_112741959.1;Name=WP_112741959.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS03980;product=hypothetical protein;protein_id=WP_112741959.1;transl_table=11 NZ_CP087814.1 RefSeq gene 755139 755888 . - . ID=gene-LP088_RS03985;Name=LP088_RS03985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03985;old_locus_tag=LP088_03975 NZ_CP087814.1 Protein Homology CDS 755139 755888 . - 0 ID=cds-WP_112741960.1;Parent=gene-LP088_RS03985;Dbxref=Genbank:WP_112741960.1;Name=WP_112741960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907229.1;locus_tag=LP088_RS03985;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_112741960.1;transl_table=11 NZ_CP087814.1 RefSeq gene 755961 756173 . - . ID=gene-LP088_RS03990;Name=LP088_RS03990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03990;old_locus_tag=LP088_03980 NZ_CP087814.1 GeneMarkS-2+ CDS 755961 756173 . - 0 ID=cds-WP_143821686.1;Parent=gene-LP088_RS03990;Dbxref=Genbank:WP_143821686.1;Name=WP_143821686.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS03990;product=hypothetical protein;protein_id=WP_143821686.1;transl_table=11 NZ_CP087814.1 RefSeq gene 756293 757123 . + . ID=gene-LP088_RS03995;Name=LP088_RS03995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS03995;old_locus_tag=LP088_03985 NZ_CP087814.1 Protein Homology CDS 756293 757123 . + 0 ID=cds-WP_078274189.1;Parent=gene-LP088_RS03995;Dbxref=Genbank:WP_078274189.1;Name=WP_078274189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513809.1;locus_tag=LP088_RS03995;product=ion transporter;protein_id=WP_078274189.1;transl_table=11 NZ_CP087814.1 RefSeq gene 757252 757617 . - . ID=gene-LP088_RS04000;Name=LP088_RS04000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04000;old_locus_tag=LP088_03990 NZ_CP087814.1 Protein Homology CDS 757252 757617 . - 0 ID=cds-WP_264676148.1;Parent=gene-LP088_RS04000;Dbxref=Genbank:WP_264676148.1;Name=WP_264676148.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015669.2;locus_tag=LP088_RS04000;product=META domain-containing protein;protein_id=WP_264676148.1;transl_table=11 NZ_CP087814.1 RefSeq gene 757930 758823 . + . ID=gene-LP088_RS04005;Name=LP088_RS04005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04005;old_locus_tag=LP088_03995 NZ_CP087814.1 Protein Homology CDS 757930 758823 . + 0 ID=cds-WP_264676149.1;Parent=gene-LP088_RS04005;Dbxref=Genbank:WP_264676149.1;Name=WP_264676149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009767306.1;locus_tag=LP088_RS04005;product=EamA/RhaT family transporter;protein_id=WP_264676149.1;transl_table=11 NZ_CP087814.1 RefSeq gene 759013 761046 . + . ID=gene-LP088_RS04010;Name=LP088_RS04010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04010;old_locus_tag=LP088_04000 NZ_CP087814.1 Protein Homology CDS 759013 761046 . + 0 ID=cds-WP_078274186.1;Parent=gene-LP088_RS04010;Dbxref=Genbank:WP_078274186.1;Name=WP_078274186.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005303153.1;locus_tag=LP088_RS04010;product=UvrD-helicase domain-containing protein;protein_id=WP_078274186.1;transl_table=11 NZ_CP087814.1 RefSeq gene 761087 761641 . + . ID=gene-LP088_RS04015;Name=LP088_RS04015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04015;old_locus_tag=LP088_04005 NZ_CP087814.1 Protein Homology CDS 761087 761641 . + 0 ID=cds-WP_078274185.1;Parent=gene-LP088_RS04015;Dbxref=Genbank:WP_078274185.1;Name=WP_078274185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007116790.1;locus_tag=LP088_RS04015;product=acyl-CoA thioesterase;protein_id=WP_078274185.1;transl_table=11 NZ_CP087814.1 RefSeq gene 761887 763740 . - . ID=gene-LP088_RS04020;Name=LP088_RS04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04020;old_locus_tag=LP088_04010 NZ_CP087814.1 GeneMarkS-2+ CDS 761887 763740 . - 0 ID=cds-WP_264676150.1;Parent=gene-LP088_RS04020;Dbxref=Genbank:WP_264676150.1;Name=WP_264676150.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS04020;product=hypothetical protein;protein_id=WP_264676150.1;transl_table=11 NZ_CP087814.1 RefSeq gene 763961 766282 . - . ID=gene-LP088_RS04025;Name=LP088_RS04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04025;old_locus_tag=LP088_04015 NZ_CP087814.1 GeneMarkS-2+ CDS 763961 766282 . - 0 ID=cds-WP_264676151.1;Parent=gene-LP088_RS04025;Dbxref=Genbank:WP_264676151.1;Name=WP_264676151.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS04025;product=hypothetical protein;protein_id=WP_264676151.1;transl_table=11 NZ_CP087814.1 RefSeq gene 766781 773815 . - . ID=gene-LP088_RS04030;Name=LP088_RS04030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04030;old_locus_tag=LP088_04020 NZ_CP087814.1 Protein Homology CDS 766781 773815 . - 0 ID=cds-WP_112741964.1;Parent=gene-LP088_RS04030;Dbxref=Genbank:WP_112741964.1;Name=WP_112741964.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017183.2;locus_tag=LP088_RS04030;product=putative Ig domain-containing protein;protein_id=WP_112741964.1;transl_table=11 NZ_CP087814.1 RefSeq gene 773876 774499 . - . ID=gene-LP088_RS04035;Name=LP088_RS04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04035;old_locus_tag=LP088_04025 NZ_CP087814.1 GeneMarkS-2+ CDS 773876 774499 . - 0 ID=cds-WP_112741965.1;Parent=gene-LP088_RS04035;Dbxref=Genbank:WP_112741965.1;Name=WP_112741965.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS04035;product=hypothetical protein;protein_id=WP_112741965.1;transl_table=11 NZ_CP087814.1 RefSeq gene 774489 775040 . - . ID=gene-LP088_RS04040;Name=LP088_RS04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04040;old_locus_tag=LP088_04030 NZ_CP087814.1 GeneMarkS-2+ CDS 774489 775040 . - 0 ID=cds-WP_162860361.1;Parent=gene-LP088_RS04040;Dbxref=Genbank:WP_162860361.1;Name=WP_162860361.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS04040;product=hypothetical protein;protein_id=WP_162860361.1;transl_table=11 NZ_CP087814.1 RefSeq gene 775132 775989 . - . ID=gene-LP088_RS04045;Name=LP088_RS04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04045;old_locus_tag=LP088_04035 NZ_CP087814.1 GeneMarkS-2+ CDS 775132 775989 . - 0 ID=cds-WP_264676152.1;Parent=gene-LP088_RS04045;Dbxref=Genbank:WP_264676152.1;Name=WP_264676152.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS04045;product=hypothetical protein;protein_id=WP_264676152.1;transl_table=11 NZ_CP087814.1 RefSeq gene 776015 776566 . - . ID=gene-LP088_RS04050;Name=LP088_RS04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04050;old_locus_tag=LP088_04040 NZ_CP087814.1 GeneMarkS-2+ CDS 776015 776566 . - 0 ID=cds-WP_078274177.1;Parent=gene-LP088_RS04050;Dbxref=Genbank:WP_078274177.1;Name=WP_078274177.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS04050;product=hypothetical protein;protein_id=WP_078274177.1;transl_table=11 NZ_CP087814.1 RefSeq gene 776772 777026 . - . ID=gene-LP088_RS04055;Name=LP088_RS04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04055;old_locus_tag=LP088_04045 NZ_CP087814.1 GeneMarkS-2+ CDS 776772 777026 . - 0 ID=cds-WP_078274176.1;Parent=gene-LP088_RS04055;Dbxref=Genbank:WP_078274176.1;Name=WP_078274176.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS04055;product=hypothetical protein;protein_id=WP_078274176.1;transl_table=11 NZ_CP087814.1 RefSeq gene 777010 777312 . - . ID=gene-LP088_RS04060;Name=LP088_RS04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04060;old_locus_tag=LP088_04050 NZ_CP087814.1 GeneMarkS-2+ CDS 777010 777312 . - 0 ID=cds-WP_162860362.1;Parent=gene-LP088_RS04060;Dbxref=Genbank:WP_162860362.1;Name=WP_162860362.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS04060;product=hypothetical protein;protein_id=WP_162860362.1;transl_table=11 NZ_CP087814.1 RefSeq gene 777470 780016 . + . ID=gene-LP088_RS04065;Name=LP088_RS04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04065;old_locus_tag=LP088_04055 NZ_CP087814.1 Protein Homology CDS 777470 780016 . + 0 ID=cds-WP_112741968.1;Parent=gene-LP088_RS04065;Dbxref=Genbank:WP_112741968.1;Name=WP_112741968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019672647.1;locus_tag=LP088_RS04065;product=heavy metal translocating P-type ATPase;protein_id=WP_112741968.1;transl_table=11 NZ_CP087814.1 RefSeq gene 780104 780244 . - . ID=gene-LP088_RS04070;Name=LP088_RS04070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04070;old_locus_tag=LP088_04060 NZ_CP087814.1 Protein Homology CDS 780104 780244 . - 0 ID=cds-WP_112741969.1;Parent=gene-LP088_RS04070;Dbxref=Genbank:WP_112741969.1;Name=WP_112741969.1;Ontology_term=GO:0009636,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=response to toxic substance|0009636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004705782.1;locus_tag=LP088_RS04070;product=entericidin A/B family lipoprotein;protein_id=WP_112741969.1;transl_table=11 NZ_CP087814.1 RefSeq gene 780411 780758 . - . ID=gene-LP088_RS04075;Name=LP088_RS04075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04075;old_locus_tag=LP088_04065 NZ_CP087814.1 Protein Homology CDS 780411 780758 . - 0 ID=cds-WP_181879621.1;Parent=gene-LP088_RS04075;Dbxref=Genbank:WP_181879621.1;Name=WP_181879621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280493.1;locus_tag=LP088_RS04075;product=TusE/DsrC/DsvC family sulfur relay protein;protein_id=WP_181879621.1;transl_table=11 NZ_CP087814.1 RefSeq gene 780793 781113 . - . ID=gene-LP088_RS04080;Name=LP088_RS04080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04080;old_locus_tag=LP088_04070 NZ_CP087814.1 Protein Homology CDS 780793 781113 . - 0 ID=cds-WP_112741970.1;Parent=gene-LP088_RS04080;Dbxref=Genbank:WP_112741970.1;Name=WP_112741970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003660018.1;locus_tag=LP088_RS04080;product=hypothetical protein;protein_id=WP_112741970.1;transl_table=11 NZ_CP087814.1 RefSeq gene 781116 781499 . - . ID=gene-LP088_RS04085;Name=tusD;gbkey=Gene;gene=tusD;gene_biotype=protein_coding;locus_tag=LP088_RS04085;old_locus_tag=LP088_04075 NZ_CP087814.1 Protein Homology CDS 781116 781499 . - 0 ID=cds-WP_078274201.1;Parent=gene-LP088_RS04085;Dbxref=Genbank:WP_078274201.1;Name=WP_078274201.1;Ontology_term=GO:0008033,GO:0016783;gbkey=CDS;gene=tusD;go_function=sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003660017.1;locus_tag=LP088_RS04085;product=sulfurtransferase complex subunit TusD;protein_id=WP_078274201.1;transl_table=11 NZ_CP087814.1 RefSeq gene 781612 784605 . + . ID=gene-LP088_RS04090;Name=glnE;gbkey=Gene;gene=glnE;gene_biotype=protein_coding;locus_tag=LP088_RS04090;old_locus_tag=LP088_04080 NZ_CP087814.1 Protein Homology CDS 781612 784605 . + 0 ID=cds-WP_228157788.1;Parent=gene-LP088_RS04090;Dbxref=Genbank:WP_228157788.1;Name=WP_228157788.1;Ontology_term=GO:0008882;gbkey=CDS;gene=glnE;go_function=[glutamate-ammonia-ligase] adenylyltransferase activity|0008882||IEA;inference=COORDINATES: protein motif:HMM:NF008292.0;locus_tag=LP088_RS04090;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;protein_id=WP_228157788.1;transl_table=11 NZ_CP087814.1 RefSeq gene 784933 786198 . + . ID=gene-LP088_RS04095;Name=LP088_RS04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04095;old_locus_tag=LP088_04085 NZ_CP087814.1 Protein Homology CDS 784933 786198 . + 0 ID=cds-WP_078274172.1;Parent=gene-LP088_RS04095;Dbxref=Genbank:WP_078274172.1;Name=WP_078274172.1;Ontology_term=GO:0051539,GO:1904047;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005029443.1;locus_tag=LP088_RS04095;product=putative DNA modification/repair radical SAM protein;protein_id=WP_078274172.1;transl_table=11 NZ_CP087814.1 RefSeq gene 786294 787118 . + . ID=gene-LP088_RS04100;Name=LP088_RS04100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04100;old_locus_tag=LP088_04090 NZ_CP087814.1 Protein Homology CDS 786294 787118 . + 0 ID=cds-WP_078274171.1;Parent=gene-LP088_RS04100;Dbxref=Genbank:WP_078274171.1;Name=WP_078274171.1;Ontology_term=GO:0008150,GO:0003674,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007395440.1;locus_tag=LP088_RS04100;product=TIGR03915 family putative DNA repair protein;protein_id=WP_078274171.1;transl_table=11 NZ_CP087814.1 RefSeq gene 787554 788093 . - . ID=gene-LP088_RS04105;Name=LP088_RS04105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04105;old_locus_tag=LP088_04095 NZ_CP087814.1 Protein Homology CDS 787554 788093 . - 0 ID=cds-WP_112742800.1;Parent=gene-LP088_RS04105;Dbxref=Genbank:WP_112742800.1;Name=WP_112742800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004787894.1;locus_tag=LP088_RS04105;product=TIGR02594 family protein;protein_id=WP_112742800.1;transl_table=11 NZ_CP087814.1 RefSeq gene 788147 788530 . - . ID=gene-LP088_RS04110;Name=LP088_RS04110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04110;old_locus_tag=LP088_04100 NZ_CP087814.1 GeneMarkS-2+ CDS 788147 788530 . - 0 ID=cds-WP_112741971.1;Parent=gene-LP088_RS04110;Dbxref=Genbank:WP_112741971.1;Name=WP_112741971.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS04110;product=hypothetical protein;protein_id=WP_112741971.1;transl_table=11 NZ_CP087814.1 RefSeq gene 788556 789350 . - . ID=gene-LP088_RS04115;Name=LP088_RS04115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04115;old_locus_tag=LP088_04105 NZ_CP087814.1 GeneMarkS-2+ CDS 788556 789350 . - 0 ID=cds-WP_112741972.1;Parent=gene-LP088_RS04115;Dbxref=Genbank:WP_112741972.1;Name=WP_112741972.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS04115;product=hypothetical protein;protein_id=WP_112741972.1;transl_table=11 NZ_CP087814.1 RefSeq gene 789334 789621 . - . ID=gene-LP088_RS04120;Name=LP088_RS04120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04120;old_locus_tag=LP088_04110 NZ_CP087814.1 GeneMarkS-2+ CDS 789334 789621 . - 0 ID=cds-WP_112741973.1;Parent=gene-LP088_RS04120;Dbxref=Genbank:WP_112741973.1;Name=WP_112741973.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS04120;product=hypothetical protein;protein_id=WP_112741973.1;transl_table=11 NZ_CP087814.1 RefSeq gene 789665 792427 . - . ID=gene-LP088_RS04125;Name=LP088_RS04125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04125;old_locus_tag=LP088_04115 NZ_CP087814.1 Protein Homology CDS 789665 792427 . - 0 ID=cds-WP_264676153.1;Parent=gene-LP088_RS04125;Dbxref=Genbank:WP_264676153.1;Name=WP_264676153.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040129.1;locus_tag=LP088_RS04125;product=tape measure protein;protein_id=WP_264676153.1;transl_table=11 NZ_CP087814.1 RefSeq gene 792535 792912 . - . ID=gene-LP088_RS04130;Name=LP088_RS04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04130;old_locus_tag=LP088_04120 NZ_CP087814.1 GeneMarkS-2+ CDS 792535 792912 . - 0 ID=cds-WP_112741984.1;Parent=gene-LP088_RS04130;Dbxref=Genbank:WP_112741984.1;Name=WP_112741984.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS04130;product=hypothetical protein;protein_id=WP_112741984.1;transl_table=11 NZ_CP087814.1 RefSeq gene 792967 793269 . - . ID=gene-LP088_RS04135;Name=LP088_RS04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04135;old_locus_tag=LP088_04125 NZ_CP087814.1 Protein Homology CDS 792967 793269 . - 0 ID=cds-WP_264676154.1;Parent=gene-LP088_RS04135;Dbxref=Genbank:WP_264676154.1;Name=WP_264676154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003658546.1;locus_tag=LP088_RS04135;product=DUF4035 domain-containing protein;protein_id=WP_264676154.1;transl_table=11 NZ_CP087814.1 RefSeq gene 793290 793634 . - . ID=gene-LP088_RS04140;Name=LP088_RS04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04140;old_locus_tag=LP088_04130 NZ_CP087814.1 Protein Homology CDS 793290 793634 . - 0 ID=cds-WP_112741986.1;Parent=gene-LP088_RS04140;Dbxref=Genbank:WP_112741986.1;Name=WP_112741986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003661718.1;locus_tag=LP088_RS04140;product=phage tail assembly chaperone family protein%2C TAC;protein_id=WP_112741986.1;transl_table=11 NZ_CP087814.1 RefSeq gene 793704 794135 . - . ID=gene-LP088_RS04145;Name=LP088_RS04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04145;old_locus_tag=LP088_04135 NZ_CP087814.1 Protein Homology CDS 793704 794135 . - 0 ID=cds-WP_264676155.1;Parent=gene-LP088_RS04145;Dbxref=Genbank:WP_264676155.1;Name=WP_264676155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003671785.1;locus_tag=LP088_RS04145;product=hypothetical protein;protein_id=WP_264676155.1;transl_table=11 NZ_CP087814.1 RefSeq gene 794165 794521 . - . ID=gene-LP088_RS04150;Name=LP088_RS04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04150;old_locus_tag=LP088_04140 NZ_CP087814.1 Protein Homology CDS 794165 794521 . - 0 ID=cds-WP_264676156.1;Parent=gene-LP088_RS04150;Dbxref=Genbank:WP_264676156.1;Name=WP_264676156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009502296.1;locus_tag=LP088_RS04150;product=hypothetical protein;protein_id=WP_264676156.1;transl_table=11 NZ_CP087814.1 RefSeq gene 794521 794988 . - . ID=gene-LP088_RS04155;Name=LP088_RS04155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04155;old_locus_tag=LP088_04145 NZ_CP087814.1 Protein Homology CDS 794521 794988 . - 0 ID=cds-WP_264676157.1;Parent=gene-LP088_RS04155;Dbxref=Genbank:WP_264676157.1;Name=WP_264676157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003658556.1;locus_tag=LP088_RS04155;product=hypothetical protein;protein_id=WP_264676157.1;transl_table=11 NZ_CP087814.1 RefSeq gene 794978 795316 . - . ID=gene-LP088_RS04160;Name=LP088_RS04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04160;old_locus_tag=LP088_04150 NZ_CP087814.1 Protein Homology CDS 794978 795316 . - 0 ID=cds-WP_264676158.1;Parent=gene-LP088_RS04160;Dbxref=Genbank:WP_264676158.1;Name=WP_264676158.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009502298.1;locus_tag=LP088_RS04160;product=phage head closure protein;protein_id=WP_264676158.1;transl_table=11 NZ_CP087814.1 RefSeq gene 795325 795612 . - . ID=gene-LP088_RS04165;Name=LP088_RS04165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04165;old_locus_tag=LP088_04155 NZ_CP087814.1 Protein Homology CDS 795325 795612 . - 0 ID=cds-WP_112742174.1;Parent=gene-LP088_RS04165;Dbxref=Genbank:WP_112742174.1;Name=WP_112742174.1;Ontology_term=GO:0016032;gbkey=CDS;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003658560.1;locus_tag=LP088_RS04165;product=head-tail connector protein;protein_id=WP_112742174.1;transl_table=11 NZ_CP087814.1 RefSeq gene 795612 796928 . - . ID=gene-LP088_RS04170;Name=LP088_RS04170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04170;old_locus_tag=LP088_04160 NZ_CP087814.1 Protein Homology CDS 795612 796928 . - 0 ID=cds-WP_264676159.1;Parent=gene-LP088_RS04170;Dbxref=Genbank:WP_264676159.1;Name=WP_264676159.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003661725.1;locus_tag=LP088_RS04170;product=phage portal protein;protein_id=WP_264676159.1;transl_table=11 NZ_CP087814.1 RefSeq gene 796928 797317 . - . ID=gene-LP088_RS04175;Name=LP088_RS04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04175;old_locus_tag=LP088_04165 NZ_CP087814.1 GeneMarkS-2+ CDS 796928 797317 . - 0 ID=cds-WP_264676160.1;Parent=gene-LP088_RS04175;Dbxref=Genbank:WP_264676160.1;Name=WP_264676160.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS04175;product=hypothetical protein;protein_id=WP_264676160.1;transl_table=11 NZ_CP087814.1 RefSeq gene 797415 798761 . - . ID=gene-LP088_RS04180;Name=LP088_RS04180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04180;old_locus_tag=LP088_04170 NZ_CP087814.1 Protein Homology CDS 797415 798761 . - 0 ID=cds-WP_264676161.1;Parent=gene-LP088_RS04180;Dbxref=Genbank:WP_264676161.1;Name=WP_264676161.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003658564.1;locus_tag=LP088_RS04180;product=phage major capsid protein;protein_id=WP_264676161.1;transl_table=11 NZ_CP087814.1 RefSeq gene 798758 799375 . - . ID=gene-LP088_RS04185;Name=LP088_RS04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04185;old_locus_tag=LP088_04175 NZ_CP087814.1 Protein Homology CDS 798758 799375 . - 0 ID=cds-WP_112741997.1;Parent=gene-LP088_RS04185;Dbxref=Genbank:WP_112741997.1;Name=WP_112741997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003671793.1;locus_tag=LP088_RS04185;product=HK97 family phage prohead protease;protein_id=WP_112741997.1;transl_table=11 NZ_CP087814.1 RefSeq gene 799444 799647 . - . ID=gene-LP088_RS04190;Name=LP088_RS04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04190;old_locus_tag=LP088_04180 NZ_CP087814.1 Protein Homology CDS 799444 799647 . - 0 ID=cds-WP_112741998.1;Parent=gene-LP088_RS04190;Dbxref=Genbank:WP_112741998.1;Name=WP_112741998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003661731.1;locus_tag=LP088_RS04190;product=hypothetical protein;protein_id=WP_112741998.1;transl_table=11 NZ_CP087814.1 RefSeq gene 799750 800583 . - . ID=gene-LP088_RS04195;Name=LP088_RS04195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04195;old_locus_tag=LP088_04185 NZ_CP087814.1 Protein Homology CDS 799750 800583 . - 0 ID=cds-WP_112742000.1;Parent=gene-LP088_RS04195;Dbxref=Genbank:WP_112742000.1;Name=WP_112742000.1;Ontology_term=GO:0032775,GO:0009007;gbkey=CDS;go_function=site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=DNA methylation on adenine|0032775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003661732.1;locus_tag=LP088_RS04195;product=DNA adenine methylase;protein_id=WP_112742000.1;transl_table=11 NZ_CP087814.1 RefSeq gene 800747 800941 . - . ID=gene-LP088_RS04200;Name=LP088_RS04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04200;old_locus_tag=LP088_04190 NZ_CP087814.1 Protein Homology CDS 800747 800941 . - 0 ID=cds-WP_228157792.1;Parent=gene-LP088_RS04200;Dbxref=Genbank:WP_228157792.1;Name=WP_228157792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003658570.1;locus_tag=LP088_RS04200;product=hypothetical protein;protein_id=WP_228157792.1;transl_table=11 NZ_CP087814.1 RefSeq gene 800919 801572 . - . ID=gene-LP088_RS04205;Name=LP088_RS04205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04205;old_locus_tag=LP088_04195 NZ_CP087814.1 Protein Homology CDS 800919 801572 . - 0 ID=cds-WP_228157793.1;Parent=gene-LP088_RS04205;Dbxref=Genbank:WP_228157793.1;Name=WP_228157793.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015321.2;locus_tag=LP088_RS04205;product=terminase large subunit;protein_id=WP_228157793.1;transl_table=11 NZ_CP087814.1 RefSeq gene 801857 802678 . + . ID=gene-LP088_RS04210;Name=LP088_RS04210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04210;old_locus_tag=LP088_04200 NZ_CP087814.1 Protein Homology CDS 801857 802678 . + 0 ID=cds-WP_112742003.1;Parent=gene-LP088_RS04210;Dbxref=Genbank:WP_112742003.1;Name=WP_112742003.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021574.2;locus_tag=LP088_RS04210;product=DUF2303 family protein;protein_id=WP_112742003.1;transl_table=11 NZ_CP087814.1 RefSeq gene 802750 802929 . + . ID=gene-LP088_RS04215;Name=LP088_RS04215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04215;old_locus_tag=LP088_04205 NZ_CP087814.1 GeneMarkS-2+ CDS 802750 802929 . + 0 ID=cds-WP_112742004.1;Parent=gene-LP088_RS04215;Dbxref=Genbank:WP_112742004.1;Name=WP_112742004.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS04215;product=hypothetical protein;protein_id=WP_112742004.1;transl_table=11 NZ_CP087814.1 RefSeq gene 802945 803133 . + . ID=gene-LP088_RS04220;Name=LP088_RS04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04220;old_locus_tag=LP088_04210 NZ_CP087814.1 GeneMarkS-2+ CDS 802945 803133 . + 0 ID=cds-WP_112742005.1;Parent=gene-LP088_RS04220;Dbxref=Genbank:WP_112742005.1;Name=WP_112742005.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS04220;product=hypothetical protein;protein_id=WP_112742005.1;transl_table=11 NZ_CP087814.1 RefSeq gene 803167 804285 . - . ID=gene-LP088_RS04225;Name=LP088_RS04225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04225;old_locus_tag=LP088_04215 NZ_CP087814.1 Protein Homology CDS 803167 804285 . - 0 ID=cds-WP_112742006.1;Parent=gene-LP088_RS04225;Dbxref=Genbank:WP_112742006.1;Name=WP_112742006.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003658593.1;locus_tag=LP088_RS04225;product=tyrosine-type recombinase/integrase;protein_id=WP_112742006.1;transl_table=11 NZ_CP087814.1 RefSeq gene 804476 804833 . - . ID=gene-LP088_RS04230;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=LP088_RS04230;old_locus_tag=LP088_04220 NZ_CP087814.1 cmsearch tmRNA 804476 804833 . - . ID=rna-LP088_RS04230;Parent=gene-LP088_RS04230;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LP088_RS04230;product=transfer-messenger RNA NZ_CP087814.1 cmsearch exon 804476 804833 . - . ID=exon-LP088_RS04230-1;Parent=rna-LP088_RS04230;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LP088_RS04230;product=transfer-messenger RNA NZ_CP087814.1 RefSeq gene 804899 805717 . - . ID=gene-LP088_RS04235;Name=LP088_RS04235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04235;old_locus_tag=LP088_04225 NZ_CP087814.1 Protein Homology CDS 804899 805717 . - 0 ID=cds-WP_078274127.1;Parent=gene-LP088_RS04235;Dbxref=Genbank:WP_078274127.1;Name=WP_078274127.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012707.2;locus_tag=LP088_RS04235;product=transporter substrate-binding domain-containing protein;protein_id=WP_078274127.1;transl_table=11 NZ_CP087814.1 RefSeq gene 806175 808247 . - . ID=gene-LP088_RS04240;Name=LP088_RS04240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04240;old_locus_tag=LP088_04230 NZ_CP087814.1 Protein Homology CDS 806175 808247 . - 0 ID=cds-WP_264676162.1;Parent=gene-LP088_RS04240;Dbxref=Genbank:WP_264676162.1;Name=WP_264676162.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012894.2;locus_tag=LP088_RS04240;product=OmpA family protein;protein_id=WP_264676162.1;transl_table=11 NZ_CP087814.1 RefSeq gene 808694 809101 . + . ID=gene-LP088_RS04245;Name=LP088_RS04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04245;old_locus_tag=LP088_04235 NZ_CP087814.1 GeneMarkS-2+ CDS 808694 809101 . + 0 ID=cds-WP_264690415.1;Parent=gene-LP088_RS04245;Dbxref=Genbank:WP_264690415.1;Name=WP_264690415.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS04245;product=hypothetical protein;protein_id=WP_264690415.1;transl_table=11 NZ_CP087814.1 RefSeq gene 809255 810376 . + . ID=gene-LP088_RS04250;Name=LP088_RS04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04250;old_locus_tag=LP088_04240 NZ_CP087814.1 Protein Homology CDS 809255 810376 . + 0 ID=cds-WP_264676164.1;Parent=gene-LP088_RS04250;Dbxref=Genbank:WP_264676164.1;Name=WP_264676164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279513.1;locus_tag=LP088_RS04250;product=tyrosine recombinase XerC;protein_id=WP_264676164.1;transl_table=11 NZ_CP087814.1 RefSeq gene 810377 811243 . - . ID=gene-LP088_RS04255;Name=LP088_RS04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04255;old_locus_tag=LP088_04245 NZ_CP087814.1 Protein Homology CDS 810377 811243 . - 0 ID=cds-WP_264676165.1;Parent=gene-LP088_RS04255;Dbxref=Genbank:WP_264676165.1;Name=WP_264676165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520563.1;locus_tag=LP088_RS04255;product=carbon-nitrogen hydrolase family protein;protein_id=WP_264676165.1;transl_table=11 NZ_CP087814.1 RefSeq gene 811552 813153 . + . ID=gene-LP088_RS04260;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=protein_coding;locus_tag=LP088_RS04260;old_locus_tag=LP088_04250 NZ_CP087814.1 Protein Homology CDS 811552 813153 . + 0 ID=cds-WP_264676166.1;Parent=gene-LP088_RS04260;Dbxref=Genbank:WP_264676166.1;Name=WP_264676166.1;Ontology_term=GO:0006352,GO:0016987;gbkey=CDS;gene=rpoN;go_function=sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279515.1;locus_tag=LP088_RS04260;product=RNA polymerase factor sigma-54;protein_id=WP_264676166.1;transl_table=11 NZ_CP087814.1 RefSeq gene 813213 813677 . - . ID=gene-LP088_RS04265;Name=LP088_RS04265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04265;old_locus_tag=LP088_04255 NZ_CP087814.1 GeneMarkS-2+ CDS 813213 813677 . - 0 ID=cds-WP_112742014.1;Parent=gene-LP088_RS04265;Dbxref=Genbank:WP_112742014.1;Name=WP_112742014.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS04265;product=DUF4124 domain-containing protein;protein_id=WP_112742014.1;transl_table=11 NZ_CP087814.1 RefSeq gene 814259 815977 . + . ID=gene-LP088_RS04270;Name=LP088_RS04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04270;old_locus_tag=LP088_04260 NZ_CP087814.1 Protein Homology CDS 814259 815977 . + 0 ID=cds-WP_228157831.1;Parent=gene-LP088_RS04270;Dbxref=Genbank:WP_228157831.1;Name=WP_228157831.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004749763.1;locus_tag=LP088_RS04270;product=acetolactate synthase 3 large subunit;protein_id=WP_228157831.1;transl_table=11 NZ_CP087814.1 RefSeq gene 815977 816489 . + . ID=gene-LP088_RS04275;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=LP088_RS04275;old_locus_tag=LP088_04265 NZ_CP087814.1 Protein Homology CDS 815977 816489 . + 0 ID=cds-WP_078274121.1;Parent=gene-LP088_RS04275;Dbxref=Genbank:WP_078274121.1;Name=WP_078274121.1;Ontology_term=GO:0009082,GO:1990610;gbkey=CDS;gene=ilvN;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003656937.1;locus_tag=LP088_RS04275;product=acetolactate synthase small subunit;protein_id=WP_078274121.1;transl_table=11 NZ_CP087814.1 RefSeq gene 816489 816773 . + . ID=gene-LP088_RS04280;Name=LP088_RS04280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04280;old_locus_tag=LP088_04270 NZ_CP087814.1 Protein Homology CDS 816489 816773 . + 0 ID=cds-WP_078274120.1;Parent=gene-LP088_RS04280;Dbxref=Genbank:WP_078274120.1;Name=WP_078274120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000048762.1;locus_tag=LP088_RS04280;product=antibiotic biosynthesis monooxygenase;protein_id=WP_078274120.1;transl_table=11 NZ_CP087814.1 RefSeq gene 816789 817046 . + . ID=gene-LP088_RS04285;Name=LP088_RS04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04285;old_locus_tag=LP088_04275 NZ_CP087814.1 GeneMarkS-2+ CDS 816789 817046 . + 0 ID=cds-WP_078274119.1;Parent=gene-LP088_RS04285;Dbxref=Genbank:WP_078274119.1;Name=WP_078274119.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS04285;product=hypothetical protein;protein_id=WP_078274119.1;transl_table=11 NZ_CP087814.1 RefSeq gene 817487 818509 . + . ID=gene-LP088_RS04290;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=LP088_RS04290;old_locus_tag=LP088_04280 NZ_CP087814.1 Protein Homology CDS 817487 818509 . + 0 ID=cds-WP_112742015.1;Parent=gene-LP088_RS04290;Dbxref=Genbank:WP_112742015.1;Name=WP_112742015.1;gbkey=CDS;gene=ilvC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003656936.1;locus_tag=LP088_RS04290;product=ketol-acid reductoisomerase;protein_id=WP_112742015.1;transl_table=11 NZ_CP087814.1 RefSeq gene 818550 819119 . - . ID=gene-LP088_RS04295;Name=LP088_RS04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04295;old_locus_tag=LP088_04285 NZ_CP087814.1 GeneMarkS-2+ CDS 818550 819119 . - 0 ID=cds-WP_264676167.1;Parent=gene-LP088_RS04295;Dbxref=Genbank:WP_264676167.1;Name=WP_264676167.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS04295;product=hypothetical protein;protein_id=WP_264676167.1;transl_table=11 NZ_CP087814.1 RefSeq gene 819127 819261 . + . ID=gene-LP088_RS04300;Name=LP088_RS04300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04300 NZ_CP087814.1 GeneMarkS-2+ CDS 819127 819261 . + 0 ID=cds-WP_264676168.1;Parent=gene-LP088_RS04300;Dbxref=Genbank:WP_264676168.1;Name=WP_264676168.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS04300;product=hypothetical protein;protein_id=WP_264676168.1;transl_table=11 NZ_CP087814.1 RefSeq gene 819292 819732 . + . ID=gene-LP088_RS04305;Name=LP088_RS04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04305;old_locus_tag=LP088_04290 NZ_CP087814.1 GeneMarkS-2+ CDS 819292 819732 . + 0 ID=cds-WP_112742019.1;Parent=gene-LP088_RS04305;Dbxref=Genbank:WP_112742019.1;Name=WP_112742019.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS04305;product=hypothetical protein;protein_id=WP_112742019.1;transl_table=11 NZ_CP087814.1 RefSeq gene 820024 820236 . + . ID=gene-LP088_RS04310;Name=LP088_RS04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04310;old_locus_tag=LP088_04295 NZ_CP087814.1 Protein Homology CDS 820024 820236 . + 0 ID=cds-WP_078274114.1;Parent=gene-LP088_RS04310;Dbxref=Genbank:WP_078274114.1;Name=WP_078274114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003230776.1;locus_tag=LP088_RS04310;product=cold-shock protein;protein_id=WP_078274114.1;transl_table=11 NZ_CP087814.1 RefSeq gene 820537 821286 . + . ID=gene-LP088_RS04315;Name=LP088_RS04315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04315;old_locus_tag=LP088_04300 NZ_CP087814.1 Protein Homology CDS 820537 821286 . + 0 ID=cds-WP_112742023.1;Parent=gene-LP088_RS04315;Dbxref=Genbank:WP_112742023.1;Name=WP_112742023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016140229.1;locus_tag=LP088_RS04315;product=electron transfer flavoprotein subunit beta/FixA family protein;protein_id=WP_112742023.1;transl_table=11 NZ_CP087814.1 RefSeq gene 821428 822360 . + . ID=gene-LP088_RS04320;Name=LP088_RS04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04320;old_locus_tag=LP088_04305 NZ_CP087814.1 Protein Homology CDS 821428 822360 . + 0 ID=cds-WP_112742025.1;Parent=gene-LP088_RS04320;Dbxref=Genbank:WP_112742025.1;Name=WP_112742025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013197050.1;locus_tag=LP088_RS04320;product=FAD-binding protein;protein_id=WP_112742025.1;transl_table=11 NZ_CP087814.1 RefSeq gene 822494 823318 . + . ID=gene-LP088_RS04325;Name=LP088_RS04325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04325;old_locus_tag=LP088_04310 NZ_CP087814.1 Protein Homology CDS 822494 823318 . + 0 ID=cds-WP_078274340.1;Parent=gene-LP088_RS04325;Dbxref=Genbank:WP_078274340.1;Name=WP_078274340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519607.1;locus_tag=LP088_RS04325;product=threonine/serine exporter family protein;protein_id=WP_078274340.1;transl_table=11 NZ_CP087814.1 RefSeq gene 823318 823779 . + . ID=gene-LP088_RS04330;Name=LP088_RS04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04330;old_locus_tag=LP088_04315 NZ_CP087814.1 Protein Homology CDS 823318 823779 . + 0 ID=cds-WP_079324232.1;Parent=gene-LP088_RS04330;Dbxref=Genbank:WP_079324232.1;Name=WP_079324232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003667097.1;locus_tag=LP088_RS04330;product=threonine/serine exporter family protein;protein_id=WP_079324232.1;transl_table=11 NZ_CP087814.1 RefSeq gene 823780 824532 . - . ID=gene-LP088_RS04335;Name=LP088_RS04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04335;old_locus_tag=LP088_04320 NZ_CP087814.1 Protein Homology CDS 823780 824532 . - 0 ID=cds-WP_112742028.1;Parent=gene-LP088_RS04335;Dbxref=Genbank:WP_112742028.1;Name=WP_112742028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198184.1;locus_tag=LP088_RS04335;product=ParA family protein;protein_id=WP_112742028.1;transl_table=11 NZ_CP087814.1 RefSeq gene 824601 825257 . - . ID=gene-LP088_RS04340;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=LP088_RS04340;old_locus_tag=LP088_04325 NZ_CP087814.1 Protein Homology CDS 824601 825257 . - 0 ID=cds-WP_078274337.1;Parent=gene-LP088_RS04340;Dbxref=Genbank:WP_078274337.1;Name=WP_078274337.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168,GO:0005575;gbkey=CDS;gene=rsmG;go_component=cellular_component|0005575||IEA;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519666.1;locus_tag=LP088_RS04340;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_078274337.1;transl_table=11 NZ_CP087814.1 RefSeq gene 825346 827724 . + . ID=gene-LP088_RS04345;Name=LP088_RS04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04345;old_locus_tag=LP088_04330 NZ_CP087814.1 Protein Homology CDS 825346 827724 . + 0 ID=cds-WP_264676169.1;Parent=gene-LP088_RS04345;Dbxref=Genbank:WP_264676169.1;Name=WP_264676169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003656788.1;locus_tag=LP088_RS04345;product=AAA family ATPase;protein_id=WP_264676169.1;transl_table=11 NZ_CP087814.1 RefSeq gene 827965 828558 . - . ID=gene-LP088_RS04350;Name=LP088_RS04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04350;old_locus_tag=LP088_04335 NZ_CP087814.1 Protein Homology CDS 827965 828558 . - 0 ID=cds-WP_112742032.1;Parent=gene-LP088_RS04350;Dbxref=Genbank:WP_112742032.1;Name=WP_112742032.1;Ontology_term=GO:0000287,GO:0008897;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,holo-[acyl-carrier-protein] synthase activity|0008897||IEA;inference=COORDINATES: protein motif:HMM:NF013786.2;locus_tag=LP088_RS04350;product=4'-phosphopantetheinyl transferase superfamily protein;protein_id=WP_112742032.1;transl_table=11 NZ_CP087814.1 RefSeq gene 828725 829372 . + . ID=gene-LP088_RS04355;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=LP088_RS04355;old_locus_tag=LP088_04340 NZ_CP087814.1 Protein Homology CDS 828725 829372 . + 0 ID=cds-WP_078274346.1;Parent=gene-LP088_RS04355;Dbxref=Genbank:WP_078274346.1;Name=WP_078274346.1;Ontology_term=GO:0006281,GO:0003906;gbkey=CDS;gene=nth;go_function=DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003656786.1;locus_tag=LP088_RS04355;product=endonuclease III;protein_id=WP_078274346.1;transl_table=11 NZ_CP087814.1 RefSeq gene 829354 829857 . + . ID=gene-LP088_RS04360;Name=LP088_RS04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04360;old_locus_tag=LP088_04345 NZ_CP087814.1 GeneMarkS-2+ CDS 829354 829857 . + 0 ID=cds-WP_078274334.1;Parent=gene-LP088_RS04360;Dbxref=Genbank:WP_078274334.1;Name=WP_078274334.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS04360;product=hypothetical protein;protein_id=WP_078274334.1;transl_table=11 NZ_CP087814.1 RefSeq gene 829943 830731 . + . ID=gene-LP088_RS04365;Name=LP088_RS04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04365;old_locus_tag=LP088_04350 NZ_CP087814.1 GeneMarkS-2+ CDS 829943 830731 . + 0 ID=cds-WP_264676170.1;Parent=gene-LP088_RS04365;Dbxref=Genbank:WP_264676170.1;Name=WP_264676170.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS04365;product=hypothetical protein;protein_id=WP_264676170.1;transl_table=11 NZ_CP087814.1 RefSeq gene 830821 832488 . - . ID=gene-LP088_RS04370;Name=LP088_RS04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04370;old_locus_tag=LP088_04355 NZ_CP087814.1 Protein Homology CDS 830821 832488 . - 0 ID=cds-WP_112742036.1;Parent=gene-LP088_RS04370;Dbxref=Genbank:WP_112742036.1;Name=WP_112742036.1;Ontology_term=GO:0004329,GO:0005524;gbkey=CDS;go_function=formate-tetrahydrofolate ligase activity|0004329||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011961566.1;locus_tag=LP088_RS04370;product=formate--tetrahydrofolate ligase;protein_id=WP_112742036.1;transl_table=11 NZ_CP087814.1 RefSeq gene 832798 833241 . - . ID=gene-LP088_RS04375;Name=LP088_RS04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04375;old_locus_tag=LP088_04360 NZ_CP087814.1 Protein Homology CDS 832798 833241 . - 0 ID=cds-WP_078274328.1;Parent=gene-LP088_RS04375;Dbxref=Genbank:WP_078274328.1;Name=WP_078274328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019518647.1;locus_tag=LP088_RS04375;product=DUF962 domain-containing protein;protein_id=WP_078274328.1;transl_table=11 NZ_CP087814.1 RefSeq gene 833390 834151 . - . ID=gene-LP088_RS04380;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=LP088_RS04380;old_locus_tag=LP088_04365 NZ_CP087814.1 Protein Homology CDS 833390 834151 . - 0 ID=cds-WP_078274327.1;Parent=gene-LP088_RS04380;Dbxref=Genbank:WP_078274327.1;Name=WP_078274327.1;Ontology_term=GO:0015890,GO:0015663,GO:0016020;gbkey=CDS;gene=pnuC;go_component=membrane|0016020||IEA;go_function=nicotinamide mononucleotide transmembrane transporter activity|0015663||IEA;go_process=nicotinamide mononucleotide transport|0015890||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201521.1;locus_tag=LP088_RS04380;product=nicotinamide riboside transporter PnuC;protein_id=WP_078274327.1;transl_table=11 NZ_CP087814.1 RefSeq gene 834338 835567 . - . ID=gene-LP088_RS04385;Name=LP088_RS04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04385;old_locus_tag=LP088_04370 NZ_CP087814.1 Protein Homology CDS 834338 835567 . - 0 ID=cds-WP_078274326.1;Parent=gene-LP088_RS04385;Dbxref=Genbank:WP_078274326.1;Name=WP_078274326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519786.1;locus_tag=LP088_RS04385;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_078274326.1;transl_table=11 NZ_CP087814.1 RefSeq gene 835734 836381 . + . ID=gene-LP088_RS04390;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=LP088_RS04390;old_locus_tag=LP088_04375 NZ_CP087814.1 Protein Homology CDS 835734 836381 . + 0 ID=cds-WP_078274325.1;Parent=gene-LP088_RS04390;Dbxref=Genbank:WP_078274325.1;Name=WP_078274325.1;Ontology_term=GO:0008654,GO:0008444;gbkey=CDS;gene=pgsA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657069.1;locus_tag=LP088_RS04390;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_078274325.1;transl_table=11 NZ_CP087814.1 RefSeq gene 836644 838872 . + . ID=gene-LP088_RS04395;Name=LP088_RS04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04395;old_locus_tag=LP088_04380 NZ_CP087814.1 Protein Homology CDS 836644 838872 . + 0 ID=cds-WP_078274324.1;Parent=gene-LP088_RS04395;Dbxref=Genbank:WP_078274324.1;Name=WP_078274324.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014713.2;locus_tag=LP088_RS04395;product=protein-disulfide reductase DsbD family protein;protein_id=WP_078274324.1;transl_table=11 NZ_CP087814.1 RefSeq gene 839392 839838 . + . ID=gene-LP088_RS04400;Name=LP088_RS04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04400;old_locus_tag=LP088_04385 NZ_CP087814.1 Protein Homology CDS 839392 839838 . + 0 ID=cds-WP_228157794.1;Parent=gene-LP088_RS04400;Dbxref=Genbank:WP_228157794.1;Name=WP_228157794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011961241.1;locus_tag=LP088_RS04400;product=DUF3465 domain-containing protein;protein_id=WP_228157794.1;transl_table=11 NZ_CP087814.1 RefSeq gene 839981 841249 . + . ID=gene-LP088_RS04405;Name=LP088_RS04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04405;old_locus_tag=LP088_04390 NZ_CP087814.1 Protein Homology CDS 839981 841249 . + 0 ID=cds-WP_078274322.1;Parent=gene-LP088_RS04405;Dbxref=Genbank:WP_078274322.1;Name=WP_078274322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512632.1;locus_tag=LP088_RS04405;product=phospholipase A;protein_id=WP_078274322.1;transl_table=11 NZ_CP087814.1 RefSeq gene 841253 842026 . + . ID=gene-LP088_RS04410;Name=LP088_RS04410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04410;old_locus_tag=LP088_04395 NZ_CP087814.1 GeneMarkS-2+ CDS 841253 842026 . + 0 ID=cds-WP_264690416.1;Parent=gene-LP088_RS04410;Dbxref=Genbank:WP_264690416.1;Name=WP_264690416.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS04410;product=ComF family protein;protein_id=WP_264690416.1;transl_table=11 NZ_CP087814.1 RefSeq gene 842283 842750 . + . ID=gene-LP088_RS04415;Name=LP088_RS04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04415;old_locus_tag=LP088_04400 NZ_CP087814.1 Protein Homology CDS 842283 842750 . + 0 ID=cds-WP_264684195.1;Parent=gene-LP088_RS04415;Dbxref=Genbank:WP_264684195.1;Name=WP_264684195.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019575.2;locus_tag=LP088_RS04415;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_264684195.1;transl_table=11 NZ_CP087814.1 RefSeq gene 842747 843277 . + . ID=gene-LP088_RS04420;Name=LP088_RS04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04420;old_locus_tag=LP088_04405 NZ_CP087814.1 Protein Homology CDS 842747 843277 . + 0 ID=cds-WP_220271857.1;Parent=gene-LP088_RS04420;Dbxref=Genbank:WP_220271857.1;Name=WP_220271857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010195818.1;locus_tag=LP088_RS04420;product=type IV pilus modification protein PilV;protein_id=WP_220271857.1;transl_table=11 NZ_CP087814.1 RefSeq gene 843277 844149 . + . ID=gene-LP088_RS04425;Name=LP088_RS04425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04425;old_locus_tag=LP088_04410 NZ_CP087814.1 Protein Homology CDS 843277 844149 . + 0 ID=cds-WP_264683638.1;Parent=gene-LP088_RS04425;Dbxref=Genbank:WP_264683638.1;Name=WP_264683638.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027400.2;locus_tag=LP088_RS04425;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_264683638.1;transl_table=11 NZ_CP087814.1 RefSeq gene 844161 844916 . + . ID=gene-LP088_RS04430;Name=LP088_RS04430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04430;old_locus_tag=LP088_04415 NZ_CP087814.1 GeneMarkS-2+ CDS 844161 844916 . + 0 ID=cds-WP_143821690.1;Parent=gene-LP088_RS04430;Dbxref=Genbank:WP_143821690.1;Name=WP_143821690.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS04430;product=pilus assembly protein PilX;protein_id=WP_143821690.1;transl_table=11 NZ_CP087814.1 RefSeq gene 844948 849618 . + . ID=gene-LP088_RS04435;Name=LP088_RS04435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04435;old_locus_tag=LP088_04420 NZ_CP087814.1 Protein Homology CDS 844948 849618 . + 0 ID=cds-WP_264676172.1;Parent=gene-LP088_RS04435;Dbxref=Genbank:WP_264676172.1;Name=WP_264676172.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017388.2;locus_tag=LP088_RS04435;product=PilC/PilY family type IV pilus protein;protein_id=WP_264676172.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 849644 849742 . + . ID=gene-LP088_RS04440;Name=LP088_RS04440;end_range=849742,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS04440;old_locus_tag=LP088_04425;partial=true;pseudo=true NZ_CP087814.1 Protein Homology CDS 849644 849742 . + 0 ID=cds-LP088_RS04440;Parent=gene-LP088_RS04440;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=849742,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010980743.1;locus_tag=LP088_RS04440;partial=true;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;pseudo=true;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 850159 850281 . + . ID=gene-LP088_RS04445;Name=LP088_RS04445;end_range=850281,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS04445;old_locus_tag=LP088_04430;partial=true;pseudo=true NZ_CP087814.1 Protein Homology CDS 850159 850281 . + 0 ID=cds-LP088_RS04445;Parent=gene-LP088_RS04445;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=850281,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011704652.1;locus_tag=LP088_RS04445;partial=true;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;pseudo=true;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 850255 850563 . + . ID=gene-LP088_RS04450;Name=LP088_RS04450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS04450;old_locus_tag=LP088_04435;partial=true;pseudo=true;start_range=.,850255 NZ_CP087814.1 Protein Homology CDS 850255 850563 . + 0 ID=cds-LP088_RS04450;Parent=gene-LP088_RS04450;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028042.2;locus_tag=LP088_RS04450;partial=true;product=pilus assembly protein PilE;pseudo=true;start_range=.,850255;transl_table=11 NZ_CP087814.1 RefSeq gene 850738 851520 . + . ID=gene-LP088_RS04455;Name=LP088_RS04455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04455;old_locus_tag=LP088_04440 NZ_CP087814.1 Protein Homology CDS 850738 851520 . + 0 ID=cds-WP_228157795.1;Parent=gene-LP088_RS04455;Dbxref=Genbank:WP_228157795.1;Name=WP_228157795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007393777.1;locus_tag=LP088_RS04455;product=hypothetical protein;protein_id=WP_228157795.1;transl_table=11 NZ_CP087814.1 RefSeq gene 851634 853400 . - . ID=gene-LP088_RS04460;Name=LP088_RS04460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04460;old_locus_tag=LP088_04445 NZ_CP087814.1 Protein Homology CDS 851634 853400 . - 0 ID=cds-WP_078274314.1;Parent=gene-LP088_RS04460;Dbxref=Genbank:WP_078274314.1;Name=WP_078274314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004962328.1;locus_tag=LP088_RS04460;product=GspE/PulE family protein;protein_id=WP_078274314.1;transl_table=11 NZ_CP087814.1 RefSeq gene 853604 853831 . - . ID=gene-LP088_RS04465;Name=LP088_RS04465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04465;old_locus_tag=LP088_04450 NZ_CP087814.1 Protein Homology CDS 853604 853831 . - 0 ID=cds-WP_078274313.1;Parent=gene-LP088_RS04465;Dbxref=Genbank:WP_078274313.1;Name=WP_078274313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003660657.1;locus_tag=LP088_RS04465;product=hypothetical protein;protein_id=WP_078274313.1;transl_table=11 NZ_CP087814.1 RefSeq gene 854110 856773 . + . ID=gene-LP088_RS04470;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=LP088_RS04470;old_locus_tag=LP088_04455 NZ_CP087814.1 Protein Homology CDS 854110 856773 . + 0 ID=cds-WP_264676173.1;Parent=gene-LP088_RS04470;Dbxref=Genbank:WP_264676173.1;Name=WP_264676173.1;Ontology_term=GO:0006419,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011960833.1;locus_tag=LP088_RS04470;product=alanine--tRNA ligase;protein_id=WP_264676173.1;transl_table=11 NZ_CP087814.1 RefSeq gene 856936 857187 . + . ID=gene-LP088_RS04475;Name=LP088_RS04475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04475;old_locus_tag=LP088_04460 NZ_CP087814.1 GeneMarkS-2+ CDS 856936 857187 . + 0 ID=cds-WP_264676174.1;Parent=gene-LP088_RS04475;Dbxref=Genbank:WP_264676174.1;Name=WP_264676174.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS04475;product=hypothetical protein;protein_id=WP_264676174.1;transl_table=11 NZ_CP087814.1 RefSeq gene 857407 857625 . + . ID=gene-LP088_RS04480;Name=LP088_RS04480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04480;old_locus_tag=LP088_04465 NZ_CP087814.1 GeneMarkS-2+ CDS 857407 857625 . + 0 ID=cds-WP_115369570.1;Parent=gene-LP088_RS04480;Dbxref=Genbank:WP_115369570.1;Name=WP_115369570.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS04480;product=hypothetical protein;protein_id=WP_115369570.1;transl_table=11 NZ_CP087814.1 RefSeq gene 857661 858947 . + . ID=gene-LP088_RS04485;Name=LP088_RS04485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04485;old_locus_tag=LP088_04470 NZ_CP087814.1 Protein Homology CDS 857661 858947 . + 0 ID=cds-WP_115369571.1;Parent=gene-LP088_RS04485;Dbxref=Genbank:WP_115369571.1;Name=WP_115369571.1;Ontology_term=GO:0009089,GO:0004072;gbkey=CDS;go_function=aspartate kinase activity|0004072||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199426.1;locus_tag=LP088_RS04485;product=aspartate kinase;protein_id=WP_115369571.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 859103 859270 . + . ID=gene-LP088_RS04490;Name=csrA;end_range=859270,.;gbkey=Gene;gene=csrA;gene_biotype=pseudogene;locus_tag=LP088_RS04490;old_locus_tag=LP088_04475;partial=true;pseudo=true NZ_CP087814.1 Protein Homology CDS 859103 859270 . + 0 ID=cds-LP088_RS04490;Parent=gene-LP088_RS04490;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006109,GO:0006402,GO:0003723;end_range=859270,.;gbkey=CDS;gene=csrA;go_function=RNA binding|0003723||IEA;go_process=regulation of carbohydrate metabolic process|0006109||IEA,mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209449.1;locus_tag=LP088_RS04490;partial=true;product=carbon storage regulator CsrA;pseudo=true;transl_table=11 NZ_CP087814.1 RefSeq gene 859362 859706 . + . ID=gene-LP088_RS04495;Name=LP088_RS04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04495;old_locus_tag=LP088_04480 NZ_CP087814.1 Protein Homology CDS 859362 859706 . + 0 ID=cds-WP_264676175.1;Parent=gene-LP088_RS04495;Dbxref=Genbank:WP_264676175.1;Name=WP_264676175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011960836.1;locus_tag=LP088_RS04495;product=HopJ type III effector protein;protein_id=WP_264676175.1;transl_table=11 NZ_CP087814.1 RefSeq gene 859957 860193 . + . ID=gene-LP088_RS04500;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=LP088_RS04500;old_locus_tag=LP088_04485 NZ_CP087814.1 Protein Homology CDS 859957 860193 . + 0 ID=cds-WP_029102716.1;Parent=gene-LP088_RS04500;Dbxref=Genbank:WP_029102716.1;Name=WP_029102716.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rpmB;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004997628.1;locus_tag=LP088_RS04500;product=50S ribosomal protein L28;protein_id=WP_029102716.1;transl_table=11 NZ_CP087814.1 RefSeq gene 860214 860369 . + . ID=gene-LP088_RS04505;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=LP088_RS04505;old_locus_tag=LP088_04490 NZ_CP087814.1 Protein Homology CDS 860214 860369 . + 0 ID=cds-WP_003659281.1;Parent=gene-LP088_RS04505;Dbxref=Genbank:WP_003659281.1;Name=WP_003659281.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmG;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004997627.1;locus_tag=LP088_RS04505;product=50S ribosomal protein L33;protein_id=WP_003659281.1;transl_table=11 NZ_CP087814.1 RefSeq gene 860964 861050 . - . ID=gene-LP088_RS04510;Name=LP088_RS04510;gbkey=Gene;gene_biotype=tRNA;locus_tag=LP088_RS04510;old_locus_tag=LP088_04495 NZ_CP087814.1 tRNAscan-SE tRNA 860964 861050 . - . ID=rna-LP088_RS04510;Parent=gene-LP088_RS04510;anticodon=(pos:complement(861014..861016));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS04510;product=tRNA-Leu NZ_CP087814.1 tRNAscan-SE exon 860964 861050 . - . ID=exon-LP088_RS04510-1;Parent=rna-LP088_RS04510;anticodon=(pos:complement(861014..861016));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS04510;product=tRNA-Leu NZ_CP087814.1 RefSeq gene 861079 861152 . - . ID=gene-LP088_RS04515;Name=LP088_RS04515;gbkey=Gene;gene_biotype=tRNA;locus_tag=LP088_RS04515;old_locus_tag=LP088_04500 NZ_CP087814.1 tRNAscan-SE tRNA 861079 861152 . - . ID=rna-LP088_RS04515;Parent=gene-LP088_RS04515;anticodon=(pos:complement(861118..861120));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS04515;product=tRNA-Cys NZ_CP087814.1 tRNAscan-SE exon 861079 861152 . - . ID=exon-LP088_RS04515-1;Parent=rna-LP088_RS04515;anticodon=(pos:complement(861118..861120));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS04515;product=tRNA-Cys NZ_CP087814.1 RefSeq gene 861561 863027 . + . ID=gene-LP088_RS04520;Name=LP088_RS04520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04520;old_locus_tag=LP088_04505 NZ_CP087814.1 Protein Homology CDS 861561 863027 . + 0 ID=cds-WP_078274307.1;Parent=gene-LP088_RS04520;Dbxref=Genbank:WP_078274307.1;Name=WP_078274307.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003660774.1;locus_tag=LP088_RS04520;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_078274307.1;transl_table=11 NZ_CP087814.1 RefSeq gene 863037 866183 . + . ID=gene-LP088_RS04525;Name=LP088_RS04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04525;old_locus_tag=LP088_04510 NZ_CP087814.1 Protein Homology CDS 863037 866183 . + 0 ID=cds-WP_264676176.1;Parent=gene-LP088_RS04525;Dbxref=Genbank:WP_264676176.1;Name=WP_264676176.1;Ontology_term=GO:0006810,GO:0015562,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000024872.1;locus_tag=LP088_RS04525;product=efflux RND transporter permease subunit;protein_id=WP_264676176.1;transl_table=11 NZ_CP087814.1 RefSeq gene 866273 867994 . + . ID=gene-LP088_RS04530;Name=LP088_RS04530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04530;old_locus_tag=LP088_04515 NZ_CP087814.1 Protein Homology CDS 866273 867994 . + 0 ID=cds-WP_264676177.1;Parent=gene-LP088_RS04530;Dbxref=Genbank:WP_264676177.1;Name=WP_264676177.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003672924.1;locus_tag=LP088_RS04530;product=efflux transporter outer membrane subunit;protein_id=WP_264676177.1;transl_table=11 NZ_CP087814.1 RefSeq gene 868186 869154 . - . ID=gene-LP088_RS04535;Name=LP088_RS04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04535;old_locus_tag=LP088_04520 NZ_CP087814.1 Protein Homology CDS 868186 869154 . - 0 ID=cds-WP_112742052.1;Parent=gene-LP088_RS04535;Dbxref=Genbank:WP_112742052.1;Name=WP_112742052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199613.1;locus_tag=LP088_RS04535;product=hypothetical protein;protein_id=WP_112742052.1;transl_table=11 NZ_CP087814.1 RefSeq gene 869327 870565 . + . ID=gene-LP088_RS04540;Name=LP088_RS04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04540;old_locus_tag=LP088_04525 NZ_CP087814.1 Protein Homology CDS 869327 870565 . + 0 ID=cds-WP_078274303.1;Parent=gene-LP088_RS04540;Dbxref=Genbank:WP_078274303.1;Name=WP_078274303.1;Ontology_term=GO:0042953,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004878461.1;locus_tag=LP088_RS04540;product=lipoprotein-releasing ABC transporter permease subunit;protein_id=WP_078274303.1;transl_table=11 NZ_CP087814.1 RefSeq gene 870575 871255 . + . ID=gene-LP088_RS04545;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=LP088_RS04545;old_locus_tag=LP088_04530 NZ_CP087814.1 Protein Homology CDS 870575 871255 . + 0 ID=cds-WP_078274302.1;Parent=gene-LP088_RS04545;Dbxref=Genbank:WP_078274302.1;Name=WP_078274302.1;Ontology_term=GO:0042953,GO:0005524,GO:0043190;gbkey=CDS;gene=lolD;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513135.1;locus_tag=LP088_RS04545;product=lipoprotein-releasing ABC transporter ATP-binding protein LolD;protein_id=WP_078274302.1;transl_table=11 NZ_CP087814.1 RefSeq gene 871339 872547 . - . ID=gene-LP088_RS04550;Name=LP088_RS04550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04550;old_locus_tag=LP088_04535 NZ_CP087814.1 Protein Homology CDS 871339 872547 . - 0 ID=cds-WP_029102711.1;Parent=gene-LP088_RS04550;Dbxref=Genbank:WP_029102711.1;Name=WP_029102711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003669743.1;locus_tag=LP088_RS04550;product=alpha-hydroxy-acid oxidizing protein;protein_id=WP_029102711.1;transl_table=11 NZ_CP087814.1 RefSeq gene 872651 874411 . - . ID=gene-LP088_RS04555;Name=LP088_RS04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04555;old_locus_tag=LP088_04540 NZ_CP087814.1 Protein Homology CDS 872651 874411 . - 0 ID=cds-WP_078274301.1;Parent=gene-LP088_RS04555;Dbxref=Genbank:WP_078274301.1;Name=WP_078274301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011960898.1;locus_tag=LP088_RS04555;product=L-lactate permease;protein_id=WP_078274301.1;transl_table=11 NZ_CP087814.1 RefSeq gene 874984 875394 . - . ID=gene-LP088_RS04560;Name=LP088_RS04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04560;old_locus_tag=LP088_04545 NZ_CP087814.1 GeneMarkS-2+ CDS 874984 875394 . - 0 ID=cds-WP_078274300.1;Parent=gene-LP088_RS04560;Dbxref=Genbank:WP_078274300.1;Name=WP_078274300.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS04560;product=hypothetical protein;protein_id=WP_078274300.1;transl_table=11 NZ_CP087814.1 RefSeq gene 875554 876225 . + . ID=gene-LP088_RS04565;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=LP088_RS04565;old_locus_tag=LP088_04550 NZ_CP087814.1 Protein Homology CDS 875554 876225 . + 0 ID=cds-WP_264676329.1;Parent=gene-LP088_RS04565;Dbxref=Genbank:WP_264676329.1;Name=WP_264676329.1;Ontology_term=GO:0009252,GO:0009274,GO:0016020;gbkey=CDS;gene=mtgA;go_component=peptidoglycan-based cell wall|0009274||IEA,membrane|0016020||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005202246.1;locus_tag=LP088_RS04565;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=WP_264676329.1;transl_table=11 NZ_CP087814.1 RefSeq gene 876227 876916 . - . ID=gene-LP088_RS04570;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=LP088_RS04570;old_locus_tag=LP088_04555 NZ_CP087814.1 Protein Homology CDS 876227 876916 . - 0 ID=cds-WP_228157834.1;Parent=gene-LP088_RS04570;Dbxref=Genbank:WP_228157834.1;Name=WP_228157834.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine-N7-)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519557.1;locus_tag=LP088_RS04570;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_228157834.1;transl_table=11 NZ_CP087814.1 RefSeq gene 877139 878071 . + . ID=gene-LP088_RS04575;Name=LP088_RS04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04575;old_locus_tag=LP088_04560 NZ_CP087814.1 Protein Homology CDS 877139 878071 . + 0 ID=cds-WP_264676178.1;Parent=gene-LP088_RS04575;Dbxref=Genbank:WP_264676178.1;Name=WP_264676178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003658893.1;locus_tag=LP088_RS04575;product=DUF2628 domain-containing protein;protein_id=WP_264676178.1;transl_table=11 NZ_CP087814.1 RefSeq gene 878074 878529 . - . ID=gene-LP088_RS04580;Name=LP088_RS04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04580;old_locus_tag=LP088_04565 NZ_CP087814.1 GeneMarkS-2+ CDS 878074 878529 . - 0 ID=cds-WP_264690417.1;Parent=gene-LP088_RS04580;Dbxref=Genbank:WP_264690417.1;Name=WP_264690417.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS04580;product=hypothetical protein;protein_id=WP_264690417.1;transl_table=11 NZ_CP087814.1 RefSeq gene 878553 878840 . - . ID=gene-LP088_RS04585;Name=LP088_RS04585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04585;old_locus_tag=LP088_04570 NZ_CP087814.1 GeneMarkS-2+ CDS 878553 878840 . - 0 ID=cds-WP_264690418.1;Parent=gene-LP088_RS04585;Dbxref=Genbank:WP_264690418.1;Name=WP_264690418.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS04585;product=metallophosphoesterase;protein_id=WP_264690418.1;transl_table=11 NZ_CP087814.1 RefSeq gene 878837 879490 . - . ID=gene-LP088_RS04590;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=LP088_RS04590;old_locus_tag=LP088_04575 NZ_CP087814.1 Protein Homology CDS 878837 879490 . - 0 ID=cds-WP_112742058.1;Parent=gene-LP088_RS04590;Dbxref=Genbank:WP_112742058.1;Name=WP_112742058.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181;gbkey=CDS;gene=pdxH;go_function=pyridoxamine-phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443225.1;locus_tag=LP088_RS04590;product=pyridoxamine 5'-phosphate oxidase;protein_id=WP_112742058.1;transl_table=11 NZ_CP087814.1 RefSeq gene 879510 879896 . - . ID=gene-LP088_RS04595;Name=LP088_RS04595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04595;old_locus_tag=LP088_04580 NZ_CP087814.1 GeneMarkS-2+ CDS 879510 879896 . - 0 ID=cds-WP_112742060.1;Parent=gene-LP088_RS04595;Dbxref=Genbank:WP_112742060.1;Name=WP_112742060.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS04595;product=hypothetical protein;protein_id=WP_112742060.1;transl_table=11 NZ_CP087814.1 RefSeq gene 879907 880077 . - . ID=gene-LP088_RS04600;Name=LP088_RS04600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04600;old_locus_tag=LP088_04585 NZ_CP087814.1 GeneMarkS-2+ CDS 879907 880077 . - 0 ID=cds-WP_208624082.1;Parent=gene-LP088_RS04600;Dbxref=Genbank:WP_208624082.1;Name=WP_208624082.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS04600;product=hypothetical protein;protein_id=WP_208624082.1;transl_table=11 NZ_CP087814.1 RefSeq gene 880097 880279 . - . ID=gene-LP088_RS04605;Name=LP088_RS04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04605;old_locus_tag=LP088_04590 NZ_CP087814.1 GeneMarkS-2+ CDS 880097 880279 . - 0 ID=cds-WP_208624083.1;Parent=gene-LP088_RS04605;Dbxref=Genbank:WP_208624083.1;Name=WP_208624083.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS04605;product=hypothetical protein;protein_id=WP_208624083.1;transl_table=11 NZ_CP087814.1 RefSeq gene 880276 880524 . - . ID=gene-LP088_RS04610;Name=LP088_RS04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04610;old_locus_tag=LP088_04595 NZ_CP087814.1 GeneMarkS-2+ CDS 880276 880524 . - 0 ID=cds-WP_078274292.1;Parent=gene-LP088_RS04610;Dbxref=Genbank:WP_078274292.1;Name=WP_078274292.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS04610;product=hypothetical protein;protein_id=WP_078274292.1;transl_table=11 NZ_CP087814.1 RefSeq gene 880694 882049 . - . ID=gene-LP088_RS04615;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=LP088_RS04615;old_locus_tag=LP088_04600 NZ_CP087814.1 Protein Homology CDS 880694 882049 . - 0 ID=cds-WP_112742062.1;Parent=gene-LP088_RS04615;Dbxref=Genbank:WP_112742062.1;Name=WP_112742062.1;Ontology_term=GO:0005975,GO:0000287,GO:0008966,GO:0016868;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA,intramolecular transferase activity%2C phosphotransferases|0016868||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443224.1;locus_tag=LP088_RS04615;product=phosphoglucosamine mutase;protein_id=WP_112742062.1;transl_table=11 NZ_CP087814.1 RefSeq gene 882247 885213 . + . ID=gene-LP088_RS04620;Name=LP088_RS04620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04620;old_locus_tag=LP088_04605 NZ_CP087814.1 Protein Homology CDS 882247 885213 . + 0 ID=cds-WP_112742064.1;Parent=gene-LP088_RS04620;Dbxref=Genbank:WP_112742064.1;Name=WP_112742064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011281101.1;locus_tag=LP088_RS04620;product=insulinase family protein;protein_id=WP_112742064.1;transl_table=11 NZ_CP087814.1 RefSeq gene 885277 886095 . - . ID=gene-LP088_RS04625;Name=trpC;gbkey=Gene;gene=trpC;gene_biotype=protein_coding;locus_tag=LP088_RS04625;old_locus_tag=LP088_04610 NZ_CP087814.1 Protein Homology CDS 885277 886095 . - 0 ID=cds-WP_078274289.1;Parent=gene-LP088_RS04625;Dbxref=Genbank:WP_078274289.1;Name=WP_078274289.1;Ontology_term=GO:0006568,GO:0004425;gbkey=CDS;gene=trpC;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA;go_process=tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019518910.1;locus_tag=LP088_RS04625;product=indole-3-glycerol phosphate synthase TrpC;protein_id=WP_078274289.1;transl_table=11 NZ_CP087814.1 RefSeq gene 886171 887232 . - . ID=gene-LP088_RS04630;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=LP088_RS04630;old_locus_tag=LP088_04615 NZ_CP087814.1 Protein Homology CDS 886171 887232 . - 0 ID=cds-WP_112742066.1;Parent=gene-LP088_RS04630;Dbxref=Genbank:WP_112742066.1;Name=WP_112742066.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003658318.1;locus_tag=LP088_RS04630;product=anthranilate phosphoribosyltransferase;protein_id=WP_112742066.1;transl_table=11 NZ_CP087814.1 RefSeq gene 887321 887944 . - . ID=gene-LP088_RS04635;Name=LP088_RS04635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04635;old_locus_tag=LP088_04620 NZ_CP087814.1 Protein Homology CDS 887321 887944 . - 0 ID=cds-WP_078274287.1;Parent=gene-LP088_RS04635;Dbxref=Genbank:WP_078274287.1;Name=WP_078274287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003658317.1;locus_tag=LP088_RS04635;product=aminodeoxychorismate/anthranilate synthase component II;protein_id=WP_078274287.1;transl_table=11 NZ_CP087814.1 RefSeq gene 888221 888397 . - . ID=gene-LP088_RS04640;Name=LP088_RS04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04640;old_locus_tag=LP088_04625 NZ_CP087814.1 GeneMarkS-2+ CDS 888221 888397 . - 0 ID=cds-WP_162860363.1;Parent=gene-LP088_RS04640;Dbxref=Genbank:WP_162860363.1;Name=WP_162860363.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS04640;product=hypothetical protein;protein_id=WP_162860363.1;transl_table=11 NZ_CP087814.1 RefSeq gene 888400 888744 . - . ID=gene-LP088_RS04645;Name=LP088_RS04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04645;old_locus_tag=LP088_04630 NZ_CP087814.1 Protein Homology CDS 888400 888744 . - 0 ID=cds-WP_112742067.1;Parent=gene-LP088_RS04645;Dbxref=Genbank:WP_112742067.1;Name=WP_112742067.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016343.2;locus_tag=LP088_RS04645;product=DUF551 domain-containing protein;protein_id=WP_112742067.1;transl_table=11 NZ_CP087814.1 RefSeq gene 888751 889263 . - . ID=gene-LP088_RS04650;Name=LP088_RS04650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04650;old_locus_tag=LP088_04635 NZ_CP087814.1 Protein Homology CDS 888751 889263 . - 0 ID=cds-WP_264676180.1;Parent=gene-LP088_RS04650;Dbxref=Genbank:WP_264676180.1;Name=WP_264676180.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016343.2;locus_tag=LP088_RS04650;product=DUF551 domain-containing protein;protein_id=WP_264676180.1;transl_table=11 NZ_CP087814.1 RefSeq gene 889424 889741 . - . ID=gene-LP088_RS04655;Name=LP088_RS04655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04655;old_locus_tag=LP088_04640 NZ_CP087814.1 GeneMarkS-2+ CDS 889424 889741 . - 0 ID=cds-WP_112742070.1;Parent=gene-LP088_RS04655;Dbxref=Genbank:WP_112742070.1;Name=WP_112742070.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS04655;product=hypothetical protein;protein_id=WP_112742070.1;transl_table=11 NZ_CP087814.1 RefSeq gene 889850 890485 . - . ID=gene-LP088_RS04660;Name=LP088_RS04660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04660;old_locus_tag=LP088_04645 NZ_CP087814.1 Protein Homology CDS 889850 890485 . - 0 ID=cds-WP_112742071.1;Parent=gene-LP088_RS04660;Dbxref=Genbank:WP_112742071.1;Name=WP_112742071.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021128.2;locus_tag=LP088_RS04660;product=YqaJ viral recombinase family protein;protein_id=WP_112742071.1;transl_table=11 NZ_CP087814.1 RefSeq gene 890482 891237 . - . ID=gene-LP088_RS04665;Name=LP088_RS04665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04665;old_locus_tag=LP088_04650 NZ_CP087814.1 Protein Homology CDS 890482 891237 . - 0 ID=cds-WP_264676181.1;Parent=gene-LP088_RS04665;Dbxref=Genbank:WP_264676181.1;Name=WP_264676181.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016302.2;locus_tag=LP088_RS04665;product=ERF family protein;protein_id=WP_264676181.1;transl_table=11 NZ_CP087814.1 RefSeq gene 891234 891434 . - . ID=gene-LP088_RS04670;Name=LP088_RS04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04670;old_locus_tag=LP088_04655 NZ_CP087814.1 GeneMarkS-2+ CDS 891234 891434 . - 0 ID=cds-WP_112742073.1;Parent=gene-LP088_RS04670;Dbxref=Genbank:WP_112742073.1;Name=WP_112742073.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS04670;product=hypothetical protein;protein_id=WP_112742073.1;transl_table=11 NZ_CP087814.1 RefSeq gene 891431 891694 . - . ID=gene-LP088_RS04675;Name=LP088_RS04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04675;old_locus_tag=LP088_04660 NZ_CP087814.1 GeneMarkS-2+ CDS 891431 891694 . - 0 ID=cds-WP_264676183.1;Parent=gene-LP088_RS04675;Dbxref=Genbank:WP_264676183.1;Name=WP_264676183.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS04675;product=hypothetical protein;protein_id=WP_264676183.1;transl_table=11 NZ_CP087814.1 RefSeq gene 891777 892580 . - . ID=gene-LP088_RS04680;Name=LP088_RS04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04680;old_locus_tag=LP088_04665 NZ_CP087814.1 Protein Homology CDS 891777 892580 . - 0 ID=cds-WP_264676697.1;Parent=gene-LP088_RS04680;Dbxref=Genbank:WP_264676697.1;Name=WP_264676697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000202272.1;locus_tag=LP088_RS04680;product=KilA-N domain-containing protein;protein_id=WP_264676697.1;transl_table=11 NZ_CP087814.1 RefSeq gene 892875 893210 . - . ID=gene-LP088_RS04685;Name=LP088_RS04685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04685;old_locus_tag=LP088_04670 NZ_CP087814.1 GeneMarkS-2+ CDS 892875 893210 . - 0 ID=cds-WP_112742255.1;Parent=gene-LP088_RS04685;Dbxref=Genbank:WP_112742255.1;Name=WP_112742255.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS04685;product=hypothetical protein;protein_id=WP_112742255.1;transl_table=11 NZ_CP087814.1 RefSeq gene 893905 894105 . + . ID=gene-LP088_RS04690;Name=LP088_RS04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04690;old_locus_tag=LP088_04675 NZ_CP087814.1 GeneMarkS-2+ CDS 893905 894105 . + 0 ID=cds-WP_062498426.1;Parent=gene-LP088_RS04690;Dbxref=Genbank:WP_062498426.1;Name=WP_062498426.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS04690;product=hypothetical protein;protein_id=WP_062498426.1;transl_table=11 NZ_CP087814.1 RefSeq gene 894164 894736 . - . ID=gene-LP088_RS04695;Name=LP088_RS04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04695;old_locus_tag=LP088_04680 NZ_CP087814.1 GeneMarkS-2+ CDS 894164 894736 . - 0 ID=cds-WP_115004628.1;Parent=gene-LP088_RS04695;Dbxref=Genbank:WP_115004628.1;Name=WP_115004628.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS04695;product=hypothetical protein;protein_id=WP_115004628.1;transl_table=11 NZ_CP087814.1 RefSeq gene 894753 895733 . - . ID=gene-LP088_RS04700;Name=LP088_RS04700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04700;old_locus_tag=LP088_04685 NZ_CP087814.1 GeneMarkS-2+ CDS 894753 895733 . - 0 ID=cds-WP_264684156.1;Parent=gene-LP088_RS04700;Dbxref=Genbank:WP_264684156.1;Name=WP_264684156.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS04700;product=hypothetical protein;protein_id=WP_264684156.1;transl_table=11 NZ_CP087814.1 RefSeq gene 895820 896170 . - . ID=gene-LP088_RS04705;Name=LP088_RS04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04705;old_locus_tag=LP088_04690 NZ_CP087814.1 GeneMarkS-2+ CDS 895820 896170 . - 0 ID=cds-WP_264676186.1;Parent=gene-LP088_RS04705;Dbxref=Genbank:WP_264676186.1;Name=WP_264676186.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS04705;product=hypothetical protein;protein_id=WP_264676186.1;transl_table=11 NZ_CP087814.1 RefSeq gene 896167 896427 . - . ID=gene-LP088_RS04710;Name=LP088_RS04710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04710;old_locus_tag=LP088_04695 NZ_CP087814.1 GeneMarkS-2+ CDS 896167 896427 . - 0 ID=cds-WP_078275377.1;Parent=gene-LP088_RS04710;Dbxref=Genbank:WP_078275377.1;Name=WP_078275377.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS04710;product=hypothetical protein;protein_id=WP_078275377.1;transl_table=11 NZ_CP087814.1 RefSeq gene 896453 897184 . - . ID=gene-LP088_RS04715;Name=LP088_RS04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04715;old_locus_tag=LP088_04700 NZ_CP087814.1 Protein Homology CDS 896453 897184 . - 0 ID=cds-WP_264676187.1;Parent=gene-LP088_RS04715;Dbxref=Genbank:WP_264676187.1;Name=WP_264676187.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012920.2;locus_tag=LP088_RS04715;product=XRE family transcriptional regulator;protein_id=WP_264676187.1;transl_table=11 NZ_CP087814.1 RefSeq gene 897335 897565 . + . ID=gene-LP088_RS04720;Name=LP088_RS04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04720;old_locus_tag=LP088_04705 NZ_CP087814.1 GeneMarkS-2+ CDS 897335 897565 . + 0 ID=cds-WP_264676188.1;Parent=gene-LP088_RS04720;Dbxref=Genbank:WP_264676188.1;Name=WP_264676188.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS04720;product=XRE family transcriptional regulator;protein_id=WP_264676188.1;transl_table=11 NZ_CP087814.1 RefSeq gene 897633 898349 . + . ID=gene-LP088_RS04725;Name=LP088_RS04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04725;old_locus_tag=LP088_04710 NZ_CP087814.1 Protein Homology CDS 897633 898349 . + 0 ID=cds-WP_264676717.1;Parent=gene-LP088_RS04725;Dbxref=Genbank:WP_264676717.1;Name=WP_264676717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004878964.1;locus_tag=LP088_RS04725;product=phage regulatory protein/antirepressor Ant;protein_id=WP_264676717.1;transl_table=11 NZ_CP087814.1 RefSeq gene 898346 898663 . + . ID=gene-LP088_RS04730;Name=LP088_RS04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04730;old_locus_tag=LP088_04715 NZ_CP087814.1 GeneMarkS-2+ CDS 898346 898663 . + 0 ID=cds-WP_078273437.1;Parent=gene-LP088_RS04730;Dbxref=Genbank:WP_078273437.1;Name=WP_078273437.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS04730;product=hypothetical protein;protein_id=WP_078273437.1;transl_table=11 NZ_CP087814.1 RefSeq gene 898660 899469 . + . ID=gene-LP088_RS04735;Name=LP088_RS04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04735;old_locus_tag=LP088_04720 NZ_CP087814.1 Protein Homology CDS 898660 899469 . + 0 ID=cds-WP_264683005.1;Parent=gene-LP088_RS04735;Dbxref=Genbank:WP_264683005.1;Name=WP_264683005.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016381.2;locus_tag=LP088_RS04735;product=replication protein;protein_id=WP_264683005.1;transl_table=11 NZ_CP087814.1 RefSeq gene 899466 900074 . + . ID=gene-LP088_RS04740;Name=LP088_RS04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04740;old_locus_tag=LP088_04725 NZ_CP087814.1 GeneMarkS-2+ CDS 899466 900074 . + 0 ID=cds-WP_078273440.1;Parent=gene-LP088_RS04740;Dbxref=Genbank:WP_078273440.1;Name=WP_078273440.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS04740;product=hypothetical protein;protein_id=WP_078273440.1;transl_table=11 NZ_CP087814.1 RefSeq gene 900071 900478 . + . ID=gene-LP088_RS04745;Name=LP088_RS04745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04745;old_locus_tag=LP088_04730 NZ_CP087814.1 Protein Homology CDS 900071 900478 . + 0 ID=cds-WP_112742083.1;Parent=gene-LP088_RS04745;Dbxref=Genbank:WP_112742083.1;Name=WP_112742083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519914.1;locus_tag=LP088_RS04745;product=VRR-NUC domain-containing protein;protein_id=WP_112742083.1;transl_table=11 NZ_CP087814.1 RefSeq gene 900475 900753 . + . ID=gene-LP088_RS04750;Name=LP088_RS04750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04750;old_locus_tag=LP088_04735 NZ_CP087814.1 GeneMarkS-2+ CDS 900475 900753 . + 0 ID=cds-WP_078273442.1;Parent=gene-LP088_RS04750;Dbxref=Genbank:WP_078273442.1;Name=WP_078273442.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS04750;product=DUF968 domain-containing protein;protein_id=WP_078273442.1;transl_table=11 NZ_CP087814.1 RefSeq gene 900775 901065 . + . ID=gene-LP088_RS04755;Name=LP088_RS04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04755;old_locus_tag=LP088_04740 NZ_CP087814.1 GeneMarkS-2+ CDS 900775 901065 . + 0 ID=cds-WP_112742084.1;Parent=gene-LP088_RS04755;Dbxref=Genbank:WP_112742084.1;Name=WP_112742084.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS04755;product=hypothetical protein;protein_id=WP_112742084.1;transl_table=11 NZ_CP087814.1 RefSeq gene 901062 901547 . + . ID=gene-LP088_RS04760;Name=LP088_RS04760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04760;old_locus_tag=LP088_04745 NZ_CP087814.1 Protein Homology CDS 901062 901547 . + 0 ID=cds-WP_078273444.1;Parent=gene-LP088_RS04760;Dbxref=Genbank:WP_078273444.1;Name=WP_078273444.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017578.2;locus_tag=LP088_RS04760;product=recombination protein NinB;protein_id=WP_078273444.1;transl_table=11 NZ_CP087814.1 RefSeq gene 901684 901839 . + . ID=gene-LP088_RS04765;Name=LP088_RS04765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04765;old_locus_tag=LP088_04750 NZ_CP087814.1 GeneMarkS-2+ CDS 901684 901839 . + 0 ID=cds-WP_162860366.1;Parent=gene-LP088_RS04765;Dbxref=Genbank:WP_162860366.1;Name=WP_162860366.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS04765;product=hypothetical protein;protein_id=WP_162860366.1;transl_table=11 NZ_CP087814.1 RefSeq gene 901836 902120 . + . ID=gene-LP088_RS04770;Name=LP088_RS04770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04770;old_locus_tag=LP088_04755 NZ_CP087814.1 Protein Homology CDS 901836 902120 . + 0 ID=cds-WP_078275323.1;Parent=gene-LP088_RS04770;Dbxref=Genbank:WP_078275323.1;Name=WP_078275323.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039184.1;locus_tag=LP088_RS04770;product=DUF5664 domain-containing protein;protein_id=WP_078275323.1;transl_table=11 NZ_CP087814.1 RefSeq gene 902117 902938 . + . ID=gene-LP088_RS04775;Name=LP088_RS04775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04775;old_locus_tag=LP088_04760 NZ_CP087814.1 GeneMarkS-2+ CDS 902117 902938 . + 0 ID=cds-WP_264682771.1;Parent=gene-LP088_RS04775;Dbxref=Genbank:WP_264682771.1;Name=WP_264682771.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS04775;product=hypothetical protein;protein_id=WP_264682771.1;transl_table=11 NZ_CP087814.1 RefSeq gene 902935 903303 . + . ID=gene-LP088_RS04780;Name=LP088_RS04780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04780;old_locus_tag=LP088_04765 NZ_CP087814.1 Protein Homology CDS 902935 903303 . + 0 ID=cds-WP_264676194.1;Parent=gene-LP088_RS04780;Dbxref=Genbank:WP_264676194.1;Name=WP_264676194.1;Ontology_term=GO:0060567,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of termination of DNA-templated transcription|0060567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003661456.1;locus_tag=LP088_RS04780;product=antiterminator Q family protein;protein_id=WP_264676194.1;transl_table=11 NZ_CP087814.1 RefSeq gene 903435 903695 . + . ID=gene-LP088_RS04785;Name=LP088_RS04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04785;old_locus_tag=LP088_04770 NZ_CP087814.1 Protein Homology CDS 903435 903695 . + 0 ID=cds-WP_264676195.1;Parent=gene-LP088_RS04785;Dbxref=Genbank:WP_264676195.1;Name=WP_264676195.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025245.2;locus_tag=LP088_RS04785;product=Gp49 family protein;protein_id=WP_264676195.1;transl_table=11 NZ_CP087814.1 RefSeq gene 903673 904464 . + . ID=gene-LP088_RS04790;Name=LP088_RS04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04790;old_locus_tag=LP088_04775 NZ_CP087814.1 Protein Homology CDS 903673 904464 . + 0 ID=cds-WP_264690419.1;Parent=gene-LP088_RS04790;Dbxref=Genbank:WP_264690419.1;Name=WP_264690419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003662603.1;locus_tag=LP088_RS04790;product=hypothetical protein;protein_id=WP_264690419.1;transl_table=11 NZ_CP087814.1 RefSeq gene 904475 904678 . + . ID=gene-LP088_RS04795;Name=LP088_RS04795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04795;old_locus_tag=LP088_04780 NZ_CP087814.1 Protein Homology CDS 904475 904678 . + 0 ID=cds-WP_264676202.1;Parent=gene-LP088_RS04795;Dbxref=Genbank:WP_264676202.1;Name=WP_264676202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003662607.1;locus_tag=LP088_RS04795;product=hypothetical protein;protein_id=WP_264676202.1;transl_table=11 NZ_CP087814.1 RefSeq gene 904733 905080 . + . ID=gene-LP088_RS04800;Name=LP088_RS04800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04800;old_locus_tag=LP088_04785 NZ_CP087814.1 Protein Homology CDS 904733 905080 . + 0 ID=cds-WP_264676203.1;Parent=gene-LP088_RS04800;Dbxref=Genbank:WP_264676203.1;Name=WP_264676203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003664463.1;locus_tag=LP088_RS04800;product=hypothetical protein;protein_id=WP_264676203.1;transl_table=11 NZ_CP087814.1 RefSeq gene 905082 905447 . + . ID=gene-LP088_RS04805;Name=LP088_RS04805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04805;old_locus_tag=LP088_04790 NZ_CP087814.1 Protein Homology CDS 905082 905447 . + 0 ID=cds-WP_264676204.1;Parent=gene-LP088_RS04805;Dbxref=Genbank:WP_264676204.1;Name=WP_264676204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003665916.1;locus_tag=LP088_RS04805;product=glutamate 5-kinase;protein_id=WP_264676204.1;transl_table=11 NZ_CP087814.1 RefSeq gene 905428 905769 . + . ID=gene-LP088_RS04810;Name=LP088_RS04810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04810;old_locus_tag=LP088_04795 NZ_CP087814.1 Protein Homology CDS 905428 905769 . + 0 ID=cds-WP_264676205.1;Parent=gene-LP088_RS04810;Dbxref=Genbank:WP_264676205.1;Name=WP_264676205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019518983.1;locus_tag=LP088_RS04810;product=HK97 gp10 family phage protein;protein_id=WP_264676205.1;transl_table=11 NZ_CP087814.1 RefSeq gene 905766 906155 . + . ID=gene-LP088_RS04815;Name=LP088_RS04815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04815;old_locus_tag=LP088_04800 NZ_CP087814.1 Protein Homology CDS 905766 906155 . + 0 ID=cds-WP_264676206.1;Parent=gene-LP088_RS04815;Dbxref=Genbank:WP_264676206.1;Name=WP_264676206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003658153.1;locus_tag=LP088_RS04815;product=DUF4128 domain-containing protein;protein_id=WP_264676206.1;transl_table=11 NZ_CP087814.1 RefSeq gene 906240 906767 . + . ID=gene-LP088_RS04820;Name=LP088_RS04820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04820;old_locus_tag=LP088_04805 NZ_CP087814.1 Protein Homology CDS 906240 906767 . + 0 ID=cds-WP_264676207.1;Parent=gene-LP088_RS04820;Dbxref=Genbank:WP_264676207.1;Name=WP_264676207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005003617.1;locus_tag=LP088_RS04820;product=Rha family transcriptional regulator;protein_id=WP_264676207.1;transl_table=11 NZ_CP087814.1 RefSeq gene 906786 907694 . + . ID=gene-LP088_RS04825;Name=LP088_RS04825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04825;old_locus_tag=LP088_04810 NZ_CP087814.1 Protein Homology CDS 906786 907694 . + 0 ID=cds-WP_264682769.1;Parent=gene-LP088_RS04825;Dbxref=Genbank:WP_264682769.1;Name=WP_264682769.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039819.1;locus_tag=LP088_RS04825;product=phage tail tube protein;protein_id=WP_264682769.1;transl_table=11 NZ_CP087814.1 RefSeq gene 907703 908185 . + . ID=gene-LP088_RS04830;Name=LP088_RS04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04830;old_locus_tag=LP088_04815 NZ_CP087814.1 GeneMarkS-2+ CDS 907703 908185 . + 0 ID=cds-WP_264682767.1;Parent=gene-LP088_RS04830;Dbxref=Genbank:WP_264682767.1;Name=WP_264682767.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS04830;product=hypothetical protein;protein_id=WP_264682767.1;transl_table=11 NZ_CP087814.1 RefSeq gene 908266 908469 . + . ID=gene-LP088_RS04835;Name=LP088_RS04835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04835;old_locus_tag=LP088_04820 NZ_CP087814.1 GeneMarkS-2+ CDS 908266 908469 . + 0 ID=cds-WP_264682765.1;Parent=gene-LP088_RS04835;Dbxref=Genbank:WP_264682765.1;Name=WP_264682765.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS04835;product=hypothetical protein;protein_id=WP_264682765.1;transl_table=11 NZ_CP087814.1 RefSeq gene 908547 909068 . + . ID=gene-LP088_RS04840;Name=LP088_RS04840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04840;old_locus_tag=LP088_04825 NZ_CP087814.1 Protein Homology CDS 908547 909068 . + 0 ID=cds-WP_264682763.1;Parent=gene-LP088_RS04840;Dbxref=Genbank:WP_264682763.1;Name=WP_264682763.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026080.2;locus_tag=LP088_RS04840;product=DUF4468 domain-containing protein;protein_id=WP_264682763.1;transl_table=11 NZ_CP087814.1 RefSeq gene 909156 909296 . + . ID=gene-LP088_RS04845;Name=LP088_RS04845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04845;old_locus_tag=LP088_04830 NZ_CP087814.1 GeneMarkS-2+ CDS 909156 909296 . + 0 ID=cds-WP_264682761.1;Parent=gene-LP088_RS04845;Dbxref=Genbank:WP_264682761.1;Name=WP_264682761.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS04845;product=hypothetical protein;protein_id=WP_264682761.1;transl_table=11 NZ_CP087814.1 RefSeq gene 909410 909541 . + . ID=gene-LP088_RS04850;Name=LP088_RS04850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04850 NZ_CP087814.1 GeneMarkS-2+ CDS 909410 909541 . + 0 ID=cds-WP_264682760.1;Parent=gene-LP088_RS04850;Dbxref=Genbank:WP_264682760.1;Name=WP_264682760.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS04850;product=hypothetical protein;protein_id=WP_264682760.1;transl_table=11 NZ_CP087814.1 RefSeq gene 909898 910455 . + . ID=gene-LP088_RS04855;Name=LP088_RS04855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04855;old_locus_tag=LP088_04835 NZ_CP087814.1 Protein Homology CDS 909898 910455 . + 0 ID=cds-WP_115004704.1;Parent=gene-LP088_RS04855;Dbxref=Genbank:WP_115004704.1;Name=WP_115004704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005215655.1;locus_tag=LP088_RS04855;product=Panacea domain-containing protein;protein_id=WP_115004704.1;transl_table=11 NZ_CP087814.1 RefSeq gene 910452 910874 . + . ID=gene-LP088_RS04860;Name=LP088_RS04860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04860;old_locus_tag=LP088_04840 NZ_CP087814.1 Protein Homology CDS 910452 910874 . + 0 ID=cds-WP_115369776.1;Parent=gene-LP088_RS04860;Dbxref=Genbank:WP_115369776.1;Name=WP_115369776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004695914.1;locus_tag=LP088_RS04860;product=hypothetical protein;protein_id=WP_115369776.1;transl_table=11 NZ_CP087814.1 RefSeq gene 911246 911950 . + . ID=gene-LP088_RS04865;Name=LP088_RS04865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04865;old_locus_tag=LP088_04845 NZ_CP087814.1 Protein Homology CDS 911246 911950 . + 0 ID=cds-WP_264676211.1;Parent=gene-LP088_RS04865;Dbxref=Genbank:WP_264676211.1;Name=WP_264676211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001255529.1;locus_tag=LP088_RS04865;product=KilA-N domain-containing protein;protein_id=WP_264676211.1;transl_table=11 NZ_CP087814.1 RefSeq gene 912295 912495 . - . ID=gene-LP088_RS04870;Name=LP088_RS04870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04870;old_locus_tag=LP088_04850 NZ_CP087814.1 Protein Homology CDS 912295 912495 . - 0 ID=cds-WP_062501372.1;Parent=gene-LP088_RS04870;Dbxref=Genbank:WP_062501372.1;Name=WP_062501372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003659811.1;locus_tag=LP088_RS04870;product=hypothetical protein;protein_id=WP_062501372.1;transl_table=11 NZ_CP087814.1 RefSeq gene 912874 913920 . + . ID=gene-LP088_RS04875;Name=LP088_RS04875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04875;old_locus_tag=LP088_04855 NZ_CP087814.1 Protein Homology CDS 912874 913920 . + 0 ID=cds-WP_264690420.1;Parent=gene-LP088_RS04875;Dbxref=Genbank:WP_264690420.1;Name=WP_264690420.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040129.1;locus_tag=LP088_RS04875;product=tape measure protein;protein_id=WP_264690420.1;transl_table=11 NZ_CP087814.1 RefSeq gene 913917 914600 . + . ID=gene-LP088_RS04880;Name=LP088_RS04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04880;old_locus_tag=LP088_04860 NZ_CP087814.1 Protein Homology CDS 913917 914600 . + 0 ID=cds-WP_264676213.1;Parent=gene-LP088_RS04880;Dbxref=Genbank:WP_264676213.1;Name=WP_264676213.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009502281.1;locus_tag=LP088_RS04880;product=phage minor tail protein L;protein_id=WP_264676213.1;transl_table=11 NZ_CP087814.1 RefSeq gene 914642 914872 . - . ID=gene-LP088_RS04885;Name=LP088_RS04885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04885;old_locus_tag=LP088_04865 NZ_CP087814.1 Protein Homology CDS 914642 914872 . - 0 ID=cds-WP_078275311.1;Parent=gene-LP088_RS04885;Dbxref=Genbank:WP_078275311.1;Name=WP_078275311.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005221971.1;locus_tag=LP088_RS04885;product=Arc family DNA-binding protein;protein_id=WP_078275311.1;transl_table=11 NZ_CP087814.1 RefSeq gene 915045 915641 . + . ID=gene-LP088_RS04890;Name=LP088_RS04890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04890;old_locus_tag=LP088_04870 NZ_CP087814.1 Protein Homology CDS 915045 915641 . + 0 ID=cds-WP_264676214.1;Parent=gene-LP088_RS04890;Dbxref=Genbank:WP_264676214.1;Name=WP_264676214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003658140.1;locus_tag=LP088_RS04890;product=antA/AntB antirepressor family protein;protein_id=WP_264676214.1;transl_table=11 NZ_CP087814.1 RefSeq gene 915638 915826 . + . ID=gene-LP088_RS04895;Name=LP088_RS04895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04895;old_locus_tag=LP088_04875 NZ_CP087814.1 Protein Homology CDS 915638 915826 . + 0 ID=cds-WP_078275309.1;Parent=gene-LP088_RS04895;Dbxref=Genbank:WP_078275309.1;Name=WP_078275309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003658139.1;locus_tag=LP088_RS04895;product=hypothetical protein;protein_id=WP_078275309.1;transl_table=11 NZ_CP087814.1 RefSeq gene 915894 916670 . + . ID=gene-LP088_RS04900;Name=LP088_RS04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04900;old_locus_tag=LP088_04880 NZ_CP087814.1 Protein Homology CDS 915894 916670 . + 0 ID=cds-WP_078275308.1;Parent=gene-LP088_RS04900;Dbxref=Genbank:WP_078275308.1;Name=WP_078275308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519885.1;locus_tag=LP088_RS04900;product=C40 family peptidase;protein_id=WP_078275308.1;transl_table=11 NZ_CP087814.1 RefSeq gene 916642 916947 . - . ID=gene-LP088_RS04905;Name=LP088_RS04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04905;old_locus_tag=LP088_04885 NZ_CP087814.1 Protein Homology CDS 916642 916947 . - 0 ID=cds-WP_078275307.1;Parent=gene-LP088_RS04905;Dbxref=Genbank:WP_078275307.1;Name=WP_078275307.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019673834.1;locus_tag=LP088_RS04905;product=HigA family addiction module antitoxin;protein_id=WP_078275307.1;transl_table=11 NZ_CP087814.1 RefSeq gene 916962 917240 . - . ID=gene-LP088_RS04910;Name=LP088_RS04910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04910;old_locus_tag=LP088_04890 NZ_CP087814.1 Protein Homology CDS 916962 917240 . - 0 ID=cds-WP_078275306.1;Parent=gene-LP088_RS04910;Dbxref=Genbank:WP_078275306.1;Name=WP_078275306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010952670.1;locus_tag=LP088_RS04910;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_078275306.1;transl_table=11 NZ_CP087814.1 RefSeq gene 917326 917910 . + . ID=gene-LP088_RS04915;Name=LP088_RS04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04915;old_locus_tag=LP088_04895 NZ_CP087814.1 Protein Homology CDS 917326 917910 . + 0 ID=cds-WP_264676215.1;Parent=gene-LP088_RS04915;Dbxref=Genbank:WP_264676215.1;Name=WP_264676215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003664508.1;locus_tag=LP088_RS04915;product=tail assembly protein;protein_id=WP_264676215.1;transl_table=11 NZ_CP087814.1 RefSeq gene 917935 922530 . + . ID=gene-LP088_RS04920;Name=LP088_RS04920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04920;old_locus_tag=LP088_04900 NZ_CP087814.1 Protein Homology CDS 917935 922530 . + 0 ID=cds-WP_264676216.1;Parent=gene-LP088_RS04920;Dbxref=Genbank:WP_264676216.1;Name=WP_264676216.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024939.2;locus_tag=LP088_RS04920;product=phage tail protein;protein_id=WP_264676216.1;transl_table=11 NZ_CP087814.1 RefSeq gene 922527 922886 . + . ID=gene-LP088_RS04925;Name=LP088_RS04925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04925;old_locus_tag=LP088_04905 NZ_CP087814.1 GeneMarkS-2+ CDS 922527 922886 . + 0 ID=cds-WP_115368637.1;Parent=gene-LP088_RS04925;Dbxref=Genbank:WP_115368637.1;Name=WP_115368637.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS04925;product=hypothetical protein;protein_id=WP_115368637.1;transl_table=11 NZ_CP087814.1 RefSeq gene 922883 923977 . + . ID=gene-LP088_RS04930;Name=LP088_RS04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04930;old_locus_tag=LP088_04910 NZ_CP087814.1 GeneMarkS-2+ CDS 922883 923977 . + 0 ID=cds-WP_264676217.1;Parent=gene-LP088_RS04930;Dbxref=Genbank:WP_264676217.1;Name=WP_264676217.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS04930;product=hypothetical protein;protein_id=WP_264676217.1;transl_table=11 NZ_CP087814.1 RefSeq gene 924086 924403 . + . ID=gene-LP088_RS04935;Name=LP088_RS04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04935;old_locus_tag=LP088_04915 NZ_CP087814.1 Protein Homology CDS 924086 924403 . + 0 ID=cds-WP_078275302.1;Parent=gene-LP088_RS04935;Dbxref=Genbank:WP_078275302.1;Name=WP_078275302.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027409.2;locus_tag=LP088_RS04935;product=phage holin family protein;protein_id=WP_078275302.1;transl_table=11 NZ_CP087814.1 RefSeq gene 924427 924969 . + . ID=gene-LP088_RS04940;Name=LP088_RS04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04940;old_locus_tag=LP088_04920 NZ_CP087814.1 Protein Homology CDS 924427 924969 . + 0 ID=cds-WP_244893697.1;Parent=gene-LP088_RS04940;Dbxref=Genbank:WP_244893697.1;Name=WP_244893697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003668218.1;locus_tag=LP088_RS04940;product=D-Ala-D-Ala carboxypeptidase family metallohydrolase;protein_id=WP_244893697.1;transl_table=11 NZ_CP087814.1 RefSeq gene 925023 926243 . - . ID=gene-LP088_RS04945;Name=LP088_RS04945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04945;old_locus_tag=LP088_04925 NZ_CP087814.1 Protein Homology CDS 925023 926243 . - 0 ID=cds-WP_078275300.1;Parent=gene-LP088_RS04945;Dbxref=Genbank:WP_078275300.1;Name=WP_078275300.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012798.2;locus_tag=LP088_RS04945;product=integrase arm-type DNA-binding domain-containing protein;protein_id=WP_078275300.1;transl_table=11 NZ_CP087814.1 RefSeq gene 926463 927152 . - . ID=gene-LP088_RS04950;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=LP088_RS04950;old_locus_tag=LP088_04930 NZ_CP087814.1 Protein Homology CDS 926463 927152 . - 0 ID=cds-WP_078275398.1;Parent=gene-LP088_RS04950;Dbxref=Genbank:WP_078275398.1;Name=WP_078275398.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003659953.1;locus_tag=LP088_RS04950;product=ribose-5-phosphate isomerase RpiA;protein_id=WP_078275398.1;transl_table=11 NZ_CP087814.1 RefSeq gene 927260 927568 . - . ID=gene-LP088_RS04955;Name=LP088_RS04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04955;old_locus_tag=LP088_04935 NZ_CP087814.1 Protein Homology CDS 927260 927568 . - 0 ID=cds-WP_078275399.1;Parent=gene-LP088_RS04955;Dbxref=Genbank:WP_078275399.1;Name=WP_078275399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004671742.1;locus_tag=LP088_RS04955;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_078275399.1;transl_table=11 NZ_CP087814.1 RefSeq gene 927543 927806 . - . ID=gene-LP088_RS04960;Name=LP088_RS04960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04960;old_locus_tag=LP088_04940 NZ_CP087814.1 Protein Homology CDS 927543 927806 . - 0 ID=cds-WP_065255890.1;Parent=gene-LP088_RS04960;Dbxref=Genbank:WP_065255890.1;Name=WP_065255890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001015563.1;locus_tag=LP088_RS04960;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_065255890.1;transl_table=11 NZ_CP087814.1 RefSeq gene 928385 929833 . + . ID=gene-LP088_RS04965;Name=LP088_RS04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04965;old_locus_tag=LP088_04945 NZ_CP087814.1 Protein Homology CDS 928385 929833 . + 0 ID=cds-WP_112742108.1;Parent=gene-LP088_RS04965;Dbxref=Genbank:WP_112742108.1;Name=WP_112742108.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017044.2;locus_tag=LP088_RS04965;product=insulinase family protein;protein_id=WP_112742108.1;transl_table=11 NZ_CP087814.1 RefSeq gene 930192 931661 . + . ID=gene-LP088_RS04970;Name=LP088_RS04970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04970;old_locus_tag=LP088_04950 NZ_CP087814.1 Protein Homology CDS 930192 931661 . + 0 ID=cds-WP_264676219.1;Parent=gene-LP088_RS04970;Dbxref=Genbank:WP_264676219.1;Name=WP_264676219.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017044.2;locus_tag=LP088_RS04970;product=insulinase family protein;protein_id=WP_264676219.1;transl_table=11 NZ_CP087814.1 RefSeq gene 931953 932654 . + . ID=gene-LP088_RS04975;Name=LP088_RS04975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04975;old_locus_tag=LP088_04955 NZ_CP087814.1 Protein Homology CDS 931953 932654 . + 0 ID=cds-WP_078275358.1;Parent=gene-LP088_RS04975;Dbxref=Genbank:WP_078275358.1;Name=WP_078275358.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015586042.1;locus_tag=LP088_RS04975;product=IS1 family transposase;protein_id=WP_078275358.1;transl_table=11 NZ_CP087814.1 RefSeq gene 932709 933428 . + . ID=gene-LP088_RS04980;Name=LP088_RS04980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04980;old_locus_tag=LP088_04960 NZ_CP087814.1 Protein Homology CDS 932709 933428 . + 0 ID=cds-WP_078273730.1;Parent=gene-LP088_RS04980;Dbxref=Genbank:WP_078273730.1;Name=WP_078273730.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003667647.1;locus_tag=LP088_RS04980;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_078273730.1;transl_table=11 NZ_CP087814.1 RefSeq gene 933430 933777 . - . ID=gene-LP088_RS04985;Name=LP088_RS04985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04985;old_locus_tag=LP088_04965 NZ_CP087814.1 Protein Homology CDS 933430 933777 . - 0 ID=cds-WP_078273731.1;Parent=gene-LP088_RS04985;Dbxref=Genbank:WP_078273731.1;Name=WP_078273731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519687.1;locus_tag=LP088_RS04985;product=RidA family protein;protein_id=WP_078273731.1;transl_table=11 NZ_CP087814.1 RefSeq gene 933893 935152 . - . ID=gene-LP088_RS04990;Name=LP088_RS04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04990;old_locus_tag=LP088_04970 NZ_CP087814.1 Protein Homology CDS 933893 935152 . - 0 ID=cds-WP_264676220.1;Parent=gene-LP088_RS04990;Dbxref=Genbank:WP_264676220.1;Name=WP_264676220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001266908.1;locus_tag=LP088_RS04990;product=D-amino acid dehydrogenase;protein_id=WP_264676220.1;transl_table=11 NZ_CP087814.1 RefSeq gene 935493 936335 . - . ID=gene-LP088_RS04995;Name=LP088_RS04995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS04995;old_locus_tag=LP088_04975 NZ_CP087814.1 Protein Homology CDS 935493 936335 . - 0 ID=cds-WP_264676221.1;Parent=gene-LP088_RS04995;Dbxref=Genbank:WP_264676221.1;Name=WP_264676221.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014566.2;locus_tag=LP088_RS04995;product=CPBP family intramembrane metalloprotease;protein_id=WP_264676221.1;transl_table=11 NZ_CP087814.1 RefSeq gene 936336 937223 . - . ID=gene-LP088_RS05000;Name=LP088_RS05000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05000;old_locus_tag=LP088_04980 NZ_CP087814.1 Protein Homology CDS 936336 937223 . - 0 ID=cds-WP_264676222.1;Parent=gene-LP088_RS05000;Dbxref=Genbank:WP_264676222.1;Name=WP_264676222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003668661.1;locus_tag=LP088_RS05000;product=alpha/beta hydrolase;protein_id=WP_264676222.1;transl_table=11 NZ_CP087814.1 RefSeq gene 937336 937420 . - . ID=gene-LP088_RS05005;Name=LP088_RS05005;gbkey=Gene;gene_biotype=tRNA;locus_tag=LP088_RS05005;old_locus_tag=LP088_04985 NZ_CP087814.1 tRNAscan-SE tRNA 937336 937420 . - . ID=rna-LP088_RS05005;Parent=gene-LP088_RS05005;anticodon=(pos:complement(937384..937386));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS05005;product=tRNA-Leu NZ_CP087814.1 tRNAscan-SE exon 937336 937420 . - . ID=exon-LP088_RS05005-1;Parent=rna-LP088_RS05005;anticodon=(pos:complement(937384..937386));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS05005;product=tRNA-Leu NZ_CP087814.1 RefSeq gene 937484 940030 . - . ID=gene-LP088_RS05010;Name=LP088_RS05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05010 NZ_CP087814.1 Protein Homology CDS 937484 940030 . - 0 ID=cds-WP_078273735.1;Parent=gene-LP088_RS05010;Dbxref=Genbank:WP_078273735.1;Name=WP_078273735.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012801.2;locus_tag=LP088_RS05010;product=TonB-dependent receptor;protein_id=WP_078273735.1;transl_table=11 NZ_CP087814.1 RefSeq gene 940156 940668 . - . ID=gene-LP088_RS05015;Name=LP088_RS05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05015;old_locus_tag=LP088_05000 NZ_CP087814.1 Protein Homology CDS 940156 940668 . - 0 ID=cds-WP_264676223.1;Parent=gene-LP088_RS05015;Dbxref=Genbank:WP_264676223.1;Name=WP_264676223.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012801.2;locus_tag=LP088_RS05015;product=TonB-dependent receptor;protein_id=WP_264676223.1;transl_table=11 NZ_CP087814.1 RefSeq gene 940697 941554 . - . ID=gene-LP088_RS05020;Name=LP088_RS05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05020;old_locus_tag=LP088_05005 NZ_CP087814.1 Protein Homology CDS 940697 941554 . - 0 ID=cds-WP_264676224.1;Parent=gene-LP088_RS05020;Dbxref=Genbank:WP_264676224.1;Name=WP_264676224.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019335.2;locus_tag=LP088_RS05020;product=TonB-dependent receptor plug domain-containing protein;protein_id=WP_264676224.1;transl_table=11 NZ_CP087814.1 RefSeq gene 941880 942542 . + . ID=gene-LP088_RS05025;Name=LP088_RS05025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05025;old_locus_tag=LP088_05010 NZ_CP087814.1 GeneMarkS-2+ CDS 941880 942542 . + 0 ID=cds-WP_228157798.1;Parent=gene-LP088_RS05025;Dbxref=Genbank:WP_228157798.1;Name=WP_228157798.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS05025;product=hypothetical protein;protein_id=WP_228157798.1;transl_table=11 NZ_CP087814.1 RefSeq gene 942855 943439 . + . ID=gene-LP088_RS05030;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=LP088_RS05030;old_locus_tag=LP088_05015 NZ_CP087814.1 Protein Homology CDS 942855 943439 . + 0 ID=cds-WP_078273737.1;Parent=gene-LP088_RS05030;Dbxref=Genbank:WP_078273737.1;Name=WP_078273737.1;Ontology_term=GO:0000175,GO:0003676;gbkey=CDS;gene=orn;go_function=3'-5'-exoribonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003656697.1;locus_tag=LP088_RS05030;product=oligoribonuclease;protein_id=WP_078273737.1;transl_table=11 NZ_CP087814.1 RefSeq gene 943495 944421 . + . ID=gene-LP088_RS05035;Name=LP088_RS05035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05035;old_locus_tag=LP088_05020 NZ_CP087814.1 Protein Homology CDS 943495 944421 . + 0 ID=cds-WP_078273738.1;Parent=gene-LP088_RS05035;Dbxref=Genbank:WP_078273738.1;Name=WP_078273738.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012630.2;locus_tag=LP088_RS05035;product=matrixin family metalloprotease;protein_id=WP_078273738.1;transl_table=11 NZ_CP087814.1 RefSeq gene 944889 945155 . - . ID=gene-LP088_RS05040;Name=LP088_RS05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05040;old_locus_tag=LP088_05025 NZ_CP087814.1 GeneMarkS-2+ CDS 944889 945155 . - 0 ID=cds-WP_078273739.1;Parent=gene-LP088_RS05040;Dbxref=Genbank:WP_078273739.1;Name=WP_078273739.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS05040;product=hypothetical protein;protein_id=WP_078273739.1;transl_table=11 NZ_CP087814.1 RefSeq gene 945175 945537 . - . ID=gene-LP088_RS05045;Name=LP088_RS05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05045;old_locus_tag=LP088_05030 NZ_CP087814.1 GeneMarkS-2+ CDS 945175 945537 . - 0 ID=cds-WP_264676225.1;Parent=gene-LP088_RS05045;Dbxref=Genbank:WP_264676225.1;Name=WP_264676225.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS05045;product=hypothetical protein;protein_id=WP_264676225.1;transl_table=11 NZ_CP087814.1 RefSeq gene 945534 945770 . - . ID=gene-LP088_RS05050;Name=LP088_RS05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05050;old_locus_tag=LP088_05035 NZ_CP087814.1 GeneMarkS-2+ CDS 945534 945770 . - 0 ID=cds-WP_264676226.1;Parent=gene-LP088_RS05050;Dbxref=Genbank:WP_264676226.1;Name=WP_264676226.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS05050;product=hypothetical protein;protein_id=WP_264676226.1;transl_table=11 NZ_CP087814.1 RefSeq gene 945868 946770 . - . ID=gene-LP088_RS05055;Name=LP088_RS05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05055;old_locus_tag=LP088_05040 NZ_CP087814.1 Protein Homology CDS 945868 946770 . - 0 ID=cds-WP_078273741.1;Parent=gene-LP088_RS05055;Dbxref=Genbank:WP_078273741.1;Name=WP_078273741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007116981.1;locus_tag=LP088_RS05055;product=Hsp33 family molecular chaperone HslO;protein_id=WP_078273741.1;transl_table=11 NZ_CP087814.1 RefSeq gene 947125 947862 . + . ID=gene-LP088_RS05060;Name=aat;gbkey=Gene;gene=aat;gene_biotype=protein_coding;locus_tag=LP088_RS05060;old_locus_tag=LP088_05045 NZ_CP087814.1 Protein Homology CDS 947125 947862 . + 0 ID=cds-WP_115369650.1;Parent=gene-LP088_RS05060;Dbxref=Genbank:WP_115369650.1;Name=WP_115369650.1;Ontology_term=GO:0006508,GO:0008914;gbkey=CDS;gene=aat;go_function=leucyltransferase activity|0008914||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019672913.1;locus_tag=LP088_RS05060;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=WP_115369650.1;transl_table=11 NZ_CP087814.1 RefSeq gene 948009 948728 . + . ID=gene-LP088_RS05065;Name=LP088_RS05065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05065;old_locus_tag=LP088_05050 NZ_CP087814.1 Protein Homology CDS 948009 948728 . + 0 ID=cds-WP_264676227.1;Parent=gene-LP088_RS05065;Dbxref=Genbank:WP_264676227.1;Name=WP_264676227.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013827.2;locus_tag=LP088_RS05065;product=rhomboid family intramembrane serine protease;protein_id=WP_264676227.1;transl_table=11 NZ_CP087814.1 RefSeq gene 948920 950092 . - . ID=gene-LP088_RS05070;Name=LP088_RS05070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05070;old_locus_tag=LP088_05055 NZ_CP087814.1 Protein Homology CDS 948920 950092 . - 0 ID=cds-WP_112742806.1;Parent=gene-LP088_RS05070;Dbxref=Genbank:WP_112742806.1;Name=WP_112742806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011960919.1;locus_tag=LP088_RS05070;product=Mrp/NBP35 family ATP-binding protein;protein_id=WP_112742806.1;transl_table=11 NZ_CP087814.1 RefSeq gene 950149 951396 . - . ID=gene-LP088_RS05075;Name=LP088_RS05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05075;old_locus_tag=LP088_05060 NZ_CP087814.1 Protein Homology CDS 950149 951396 . - 0 ID=cds-WP_112742118.1;Parent=gene-LP088_RS05075;Dbxref=Genbank:WP_112742118.1;Name=WP_112742118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003659498.1;locus_tag=LP088_RS05075;product=NnrS family protein;protein_id=WP_112742118.1;transl_table=11 NZ_CP087814.1 RefSeq gene 951574 952623 . + . ID=gene-LP088_RS05080;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=LP088_RS05080;old_locus_tag=LP088_05065 NZ_CP087814.1 Protein Homology CDS 951574 952623 . + 0 ID=cds-WP_264676228.1;Parent=gene-LP088_RS05080;Dbxref=Genbank:WP_264676228.1;Name=WP_264676228.1;Ontology_term=GO:0016740,GO:0016853;gbkey=CDS;gene=queA;go_function=transferase activity|0016740||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657507.1;locus_tag=LP088_RS05080;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WP_264676228.1;transl_table=11 NZ_CP087814.1 RefSeq gene 952702 954201 . + . ID=gene-LP088_RS05085;Name=LP088_RS05085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05085;old_locus_tag=LP088_05070 NZ_CP087814.1 Protein Homology CDS 952702 954201 . + 0 ID=cds-WP_264690421.1;Parent=gene-LP088_RS05085;Dbxref=Genbank:WP_264690421.1;Name=WP_264690421.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016013.2;locus_tag=LP088_RS05085;product=DUF389 domain-containing protein;protein_id=WP_264690421.1;transl_table=11 NZ_CP087814.1 RefSeq gene 954230 954355 . + . ID=gene-LP088_RS05090;Name=LP088_RS05090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05090 NZ_CP087814.1 GeneMarkS-2+ CDS 954230 954355 . + 0 ID=cds-WP_264676709.1;Parent=gene-LP088_RS05090;Dbxref=Genbank:WP_264676709.1;Name=WP_264676709.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS05090;product=hypothetical protein;protein_id=WP_264676709.1;transl_table=11 NZ_CP087814.1 RefSeq gene 954399 956129 . - . ID=gene-LP088_RS05095;Name=LP088_RS05095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05095;old_locus_tag=LP088_05075 NZ_CP087814.1 Protein Homology CDS 954399 956129 . - 0 ID=cds-WP_078273474.1;Parent=gene-LP088_RS05095;Dbxref=Genbank:WP_078273474.1;Name=WP_078273474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004674924.1;locus_tag=LP088_RS05095;product=SPFH domain-containing protein;protein_id=WP_078273474.1;transl_table=11 NZ_CP087814.1 RefSeq gene 956139 956426 . - . ID=gene-LP088_RS05100;Name=LP088_RS05100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05100;old_locus_tag=LP088_05080 NZ_CP087814.1 Protein Homology CDS 956139 956426 . - 0 ID=cds-WP_078273473.1;Parent=gene-LP088_RS05100;Dbxref=Genbank:WP_078273473.1;Name=WP_078273473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007115214.1;locus_tag=LP088_RS05100;product=BrnA antitoxin family protein;protein_id=WP_078273473.1;transl_table=11 NZ_CP087814.1 RefSeq gene 956413 956691 . - . ID=gene-LP088_RS05105;Name=LP088_RS05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05105;old_locus_tag=LP088_05085 NZ_CP087814.1 Protein Homology CDS 956413 956691 . - 0 ID=cds-WP_029102268.1;Parent=gene-LP088_RS05105;Dbxref=Genbank:WP_029102268.1;Name=WP_029102268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005237348.1;locus_tag=LP088_RS05105;product=BrnT family toxin;protein_id=WP_029102268.1;transl_table=11 NZ_CP087814.1 RefSeq gene 956786 957442 . - . ID=gene-LP088_RS05110;Name=LP088_RS05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05110;old_locus_tag=LP088_05090 NZ_CP087814.1 Protein Homology CDS 956786 957442 . - 0 ID=cds-WP_078273472.1;Parent=gene-LP088_RS05110;Dbxref=Genbank:WP_078273472.1;Name=WP_078273472.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018941.2;locus_tag=LP088_RS05110;product=YqiJ family protein;protein_id=WP_078273472.1;transl_table=11 NZ_CP087814.1 RefSeq gene 957642 958307 . - . ID=gene-LP088_RS05115;Name=LP088_RS05115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05115;old_locus_tag=LP088_05095 NZ_CP087814.1 Protein Homology CDS 957642 958307 . - 0 ID=cds-WP_078273471.1;Parent=gene-LP088_RS05115;Dbxref=Genbank:WP_078273471.1;Name=WP_078273471.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015945.2;locus_tag=LP088_RS05115;product=PspA/IM30 family protein;protein_id=WP_078273471.1;transl_table=11 NZ_CP087814.1 RefSeq gene 958520 958810 . - . ID=gene-LP088_RS05120;Name=LP088_RS05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05120;old_locus_tag=LP088_05100 NZ_CP087814.1 GeneMarkS-2+ CDS 958520 958810 . - 0 ID=cds-WP_264676229.1;Parent=gene-LP088_RS05120;Dbxref=Genbank:WP_264676229.1;Name=WP_264676229.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS05120;product=hypothetical protein;protein_id=WP_264676229.1;transl_table=11 NZ_CP087814.1 RefSeq gene 958803 959318 . - . ID=gene-LP088_RS05125;Name=LP088_RS05125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05125;old_locus_tag=LP088_05105 NZ_CP087814.1 GeneMarkS-2+ CDS 958803 959318 . - 0 ID=cds-WP_115369660.1;Parent=gene-LP088_RS05125;Dbxref=Genbank:WP_115369660.1;Name=WP_115369660.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS05125;product=hypothetical protein;protein_id=WP_115369660.1;transl_table=11 NZ_CP087814.1 RefSeq gene 959466 959816 . - . ID=gene-LP088_RS05130;Name=LP088_RS05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05130;old_locus_tag=LP088_05110 NZ_CP087814.1 Protein Homology CDS 959466 959816 . - 0 ID=cds-WP_078273468.1;Parent=gene-LP088_RS05130;Dbxref=Genbank:WP_078273468.1;Name=WP_078273468.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003663769.1;locus_tag=LP088_RS05130;product=TIGR01244 family sulfur transferase;protein_id=WP_078273468.1;transl_table=11 NZ_CP087814.1 RefSeq gene 959928 960704 . + . ID=gene-LP088_RS05135;Name=LP088_RS05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05135;old_locus_tag=LP088_05115 NZ_CP087814.1 Protein Homology CDS 959928 960704 . + 0 ID=cds-WP_264676230.1;Parent=gene-LP088_RS05135;Dbxref=Genbank:WP_264676230.1;Name=WP_264676230.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021631.2;locus_tag=LP088_RS05135;product=nucleotidyltransferase domain-containing protein;protein_id=WP_264676230.1;transl_table=11 NZ_CP087814.1 RefSeq gene 960814 961863 . + . ID=gene-LP088_RS05140;Name=LP088_RS05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05140;old_locus_tag=LP088_05120 NZ_CP087814.1 Protein Homology CDS 960814 961863 . + 0 ID=cds-WP_112742121.1;Parent=gene-LP088_RS05140;Dbxref=Genbank:WP_112742121.1;Name=WP_112742121.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021631.2;locus_tag=LP088_RS05140;product=nucleotidyltransferase domain-containing protein;protein_id=WP_112742121.1;transl_table=11 NZ_CP087814.1 RefSeq gene 961920 963053 . + . ID=gene-LP088_RS05145;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=LP088_RS05145;old_locus_tag=LP088_05125 NZ_CP087814.1 Protein Homology CDS 961920 963053 . + 0 ID=cds-WP_112742122.1;Parent=gene-LP088_RS05145;Dbxref=Genbank:WP_112742122.1;Name=WP_112742122.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=queuine tRNA-ribosyltransferase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443802.1;locus_tag=LP088_RS05145;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_112742122.1;transl_table=11 NZ_CP087814.1 RefSeq gene 963288 964187 . - . ID=gene-LP088_RS05150;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=LP088_RS05150;old_locus_tag=LP088_05130 NZ_CP087814.1 Protein Homology CDS 963288 964187 . - 0 ID=cds-WP_112742123.1;Parent=gene-LP088_RS05150;Dbxref=Genbank:WP_112742123.1;Name=WP_112742123.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512593.1;locus_tag=LP088_RS05150;product=diaminopimelate epimerase;protein_id=WP_112742123.1;transl_table=11 NZ_CP087814.1 RefSeq gene 964382 965629 . + . ID=gene-LP088_RS05155;Name=LP088_RS05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05155;old_locus_tag=LP088_05135 NZ_CP087814.1 Protein Homology CDS 964382 965629 . + 0 ID=cds-WP_112742124.1;Parent=gene-LP088_RS05155;Dbxref=Genbank:WP_112742124.1;Name=WP_112742124.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019673355.1;locus_tag=LP088_RS05155;product=HRDC domain-containing protein;protein_id=WP_112742124.1;transl_table=11 NZ_CP087814.1 RefSeq gene 965662 966480 . - . ID=gene-LP088_RS05160;Name=LP088_RS05160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05160;old_locus_tag=LP088_05140 NZ_CP087814.1 GeneMarkS-2+ CDS 965662 966480 . - 0 ID=cds-WP_162860370.1;Parent=gene-LP088_RS05160;Dbxref=Genbank:WP_162860370.1;Name=WP_162860370.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS05160;product=hypothetical protein;protein_id=WP_162860370.1;transl_table=11 NZ_CP087814.1 RefSeq gene 966720 967082 . - . ID=gene-LP088_RS05165;Name=LP088_RS05165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05165;old_locus_tag=LP088_05145 NZ_CP087814.1 Protein Homology CDS 966720 967082 . - 0 ID=cds-WP_112742126.1;Parent=gene-LP088_RS05165;Dbxref=Genbank:WP_112742126.1;Name=WP_112742126.1;Ontology_term=GO:0009055,GO:0051536;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003664312.1;locus_tag=LP088_RS05165;product=2Fe-2S iron-sulfur cluster-binding protein;protein_id=WP_112742126.1;transl_table=11 NZ_CP087814.1 RefSeq gene 967100 968197 . - . ID=gene-LP088_RS05170;Name=nrdB;gbkey=Gene;gene=nrdB;gene_biotype=protein_coding;locus_tag=LP088_RS05170;old_locus_tag=LP088_05150 NZ_CP087814.1 Protein Homology CDS 967100 968197 . - 0 ID=cds-WP_112742127.1;Parent=gene-LP088_RS05170;Dbxref=Genbank:WP_112742127.1;Name=WP_112742127.1;Ontology_term=GO:0009263,GO:0016491;gbkey=CDS;gene=nrdB;go_function=oxidoreductase activity|0016491||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003661260.1;locus_tag=LP088_RS05170;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=WP_112742127.1;transl_table=11 NZ_CP087814.1 RefSeq gene 968707 968937 . + . ID=gene-LP088_RS05175;Name=LP088_RS05175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05175;old_locus_tag=LP088_05155 NZ_CP087814.1 GeneMarkS-2+ CDS 968707 968937 . + 0 ID=cds-WP_112742128.1;Parent=gene-LP088_RS05175;Dbxref=Genbank:WP_112742128.1;Name=WP_112742128.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS05175;product=hypothetical protein;protein_id=WP_112742128.1;transl_table=11 NZ_CP087814.1 RefSeq gene 969041 969343 . + . ID=gene-LP088_RS05180;Name=LP088_RS05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05180;old_locus_tag=LP088_05160 NZ_CP087814.1 GeneMarkS-2+ CDS 969041 969343 . + 0 ID=cds-WP_112742129.1;Parent=gene-LP088_RS05180;Dbxref=Genbank:WP_112742129.1;Name=WP_112742129.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS05180;product=hypothetical protein;protein_id=WP_112742129.1;transl_table=11 NZ_CP087814.1 RefSeq gene 969451 970020 . + . ID=gene-LP088_RS05185;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=LP088_RS05185;old_locus_tag=LP088_05165 NZ_CP087814.1 Protein Homology CDS 969451 970020 . + 0 ID=cds-WP_078273456.1;Parent=gene-LP088_RS05185;Dbxref=Genbank:WP_078273456.1;Name=WP_078273456.1;Ontology_term=GO:0009394,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=2'-deoxyribonucleotide metabolic process|0009394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000985727.1;locus_tag=LP088_RS05185;product=dCTP deaminase;protein_id=WP_078273456.1;transl_table=11 NZ_CP087814.1 RefSeq gene 970067 970354 . + . ID=gene-LP088_RS05190;Name=LP088_RS05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05190;old_locus_tag=LP088_05170 NZ_CP087814.1 Protein Homology CDS 970067 970354 . + 0 ID=cds-WP_029102255.1;Parent=gene-LP088_RS05190;Dbxref=Genbank:WP_029102255.1;Name=WP_029102255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019672109.1;locus_tag=LP088_RS05190;product=polyhydroxyalkanoic acid system family protein;protein_id=WP_029102255.1;transl_table=11 NZ_CP087814.1 RefSeq gene 970368 971879 . + . ID=gene-LP088_RS05195;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=LP088_RS05195;old_locus_tag=LP088_05175 NZ_CP087814.1 Protein Homology CDS 970368 971879 . + 0 ID=cds-WP_162860371.1;Parent=gene-LP088_RS05195;Dbxref=Genbank:WP_162860371.1;Name=WP_162860371.1;Ontology_term=GO:0009252,GO:0004175,GO:0009002;gbkey=CDS;gene=dacB;go_function=endopeptidase activity|0004175||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: protein motif:HMM:NF014200.2;locus_tag=LP088_RS05195;product=D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase;protein_id=WP_162860371.1;transl_table=11 NZ_CP087814.1 RefSeq gene 971907 972362 . - . ID=gene-LP088_RS05200;Name=LP088_RS05200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05200;old_locus_tag=LP088_05180 NZ_CP087814.1 Protein Homology CDS 971907 972362 . - 0 ID=cds-WP_078273454.1;Parent=gene-LP088_RS05200;Dbxref=Genbank:WP_078273454.1;Name=WP_078273454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019518561.1;locus_tag=LP088_RS05200;product=helix-turn-helix transcriptional regulator;protein_id=WP_078273454.1;transl_table=11 NZ_CP087814.1 RefSeq gene 972343 972585 . - . ID=gene-LP088_RS05205;Name=LP088_RS05205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05205;old_locus_tag=LP088_05185 NZ_CP087814.1 Protein Homology CDS 972343 972585 . - 0 ID=cds-WP_078273453.1;Parent=gene-LP088_RS05205;Dbxref=Genbank:WP_078273453.1;Name=WP_078273453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004995177.1;locus_tag=LP088_RS05205;product=hypothetical protein;protein_id=WP_078273453.1;transl_table=11 NZ_CP087814.1 RefSeq gene 972700 973557 . - . ID=gene-LP088_RS05210;Name=LP088_RS05210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05210;old_locus_tag=LP088_05190 NZ_CP087814.1 Protein Homology CDS 972700 973557 . - 0 ID=cds-WP_158079602.1;Parent=gene-LP088_RS05210;Dbxref=Genbank:WP_158079602.1;Name=WP_158079602.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014600.2;locus_tag=LP088_RS05210;product=D-alanyl-D-alanine carboxypeptidase family protein;protein_id=WP_158079602.1;transl_table=11 NZ_CP087814.1 RefSeq gene 973707 974072 . - . ID=gene-LP088_RS05215;Name=LP088_RS05215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05215;old_locus_tag=LP088_05195 NZ_CP087814.1 Protein Homology CDS 973707 974072 . - 0 ID=cds-WP_158079601.1;Parent=gene-LP088_RS05215;Dbxref=Genbank:WP_158079601.1;Name=WP_158079601.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019844.2;locus_tag=LP088_RS05215;product=SH3 domain-containing protein;protein_id=WP_158079601.1;transl_table=11 NZ_CP087814.1 RefSeq gene 974207 974479 . - . ID=gene-LP088_RS05220;Name=LP088_RS05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05220;old_locus_tag=LP088_05200 NZ_CP087814.1 Protein Homology CDS 974207 974479 . - 0 ID=cds-WP_062498883.1;Parent=gene-LP088_RS05220;Dbxref=Genbank:WP_062498883.1;Name=WP_062498883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657531.1;locus_tag=LP088_RS05220;product=hypothetical protein;protein_id=WP_062498883.1;transl_table=11 NZ_CP087814.1 RefSeq gene 974986 975609 . + . ID=gene-LP088_RS05225;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=LP088_RS05225;old_locus_tag=LP088_05205 NZ_CP087814.1 Protein Homology CDS 974986 975609 . + 0 ID=cds-WP_078273450.1;Parent=gene-LP088_RS05225;Dbxref=Genbank:WP_078273450.1;Name=WP_078273450.1;Ontology_term=GO:0009306,GO:0008320;gbkey=CDS;gene=lolA;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009501161.1;locus_tag=LP088_RS05225;product=outer membrane lipoprotein chaperone LolA;protein_id=WP_078273450.1;transl_table=11 NZ_CP087814.1 RefSeq gene 975723 977174 . - . ID=gene-LP088_RS05230;Name=LP088_RS05230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05230;old_locus_tag=LP088_05210 NZ_CP087814.1 Protein Homology CDS 975723 977174 . - 0 ID=cds-WP_078273449.1;Parent=gene-LP088_RS05230;Dbxref=Genbank:WP_078273449.1;Name=WP_078273449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443098.1;locus_tag=LP088_RS05230;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_078273449.1;transl_table=11 NZ_CP087814.1 RefSeq gene 977229 977792 . - . ID=gene-LP088_RS05235;Name=LP088_RS05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05235;old_locus_tag=LP088_05215 NZ_CP087814.1 Protein Homology CDS 977229 977792 . - 0 ID=cds-WP_112742131.1;Parent=gene-LP088_RS05235;Dbxref=Genbank:WP_112742131.1;Name=WP_112742131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017396075.1;locus_tag=LP088_RS05235;product=uracil-DNA glycosylase family protein;protein_id=WP_112742131.1;transl_table=11 NZ_CP087814.1 RefSeq gene 977799 978230 . - . ID=gene-LP088_RS05240;Name=LP088_RS05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05240;old_locus_tag=LP088_05220 NZ_CP087814.1 Protein Homology CDS 977799 978230 . - 0 ID=cds-WP_112742132.1;Parent=gene-LP088_RS05240;Dbxref=Genbank:WP_112742132.1;Name=WP_112742132.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013970.2;locus_tag=LP088_RS05240;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_112742132.1;transl_table=11 NZ_CP087814.1 RefSeq gene 978227 978472 . - . ID=gene-LP088_RS05245;Name=LP088_RS05245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05245;old_locus_tag=LP088_05225 NZ_CP087814.1 GeneMarkS-2+ CDS 978227 978472 . - 0 ID=cds-WP_112742133.1;Parent=gene-LP088_RS05245;Dbxref=Genbank:WP_112742133.1;Name=WP_112742133.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS05245;product=hypothetical protein;protein_id=WP_112742133.1;transl_table=11 NZ_CP087814.1 RefSeq gene 978570 980561 . - . ID=gene-LP088_RS05250;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=LP088_RS05250;old_locus_tag=LP088_05230 NZ_CP087814.1 Protein Homology CDS 978570 980561 . - 0 ID=cds-WP_228157838.1;Parent=gene-LP088_RS05250;Dbxref=Genbank:WP_228157838.1;Name=WP_228157838.1;Ontology_term=GO:0006289,GO:0003677,GO:0005515,GO:0005524,GO:0016787,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003658190.1;locus_tag=LP088_RS05250;product=excinuclease ABC subunit UvrB;protein_id=WP_228157838.1;transl_table=11 NZ_CP087814.1 RefSeq gene 980722 981237 . - . ID=gene-LP088_RS05255;Name=LP088_RS05255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05255;old_locus_tag=LP088_05235 NZ_CP087814.1 Protein Homology CDS 980722 981237 . - 0 ID=cds-WP_078273446.1;Parent=gene-LP088_RS05255;Dbxref=Genbank:WP_078273446.1;Name=WP_078273446.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021361.2;locus_tag=LP088_RS05255;product=DUF2059 domain-containing protein;protein_id=WP_078273446.1;transl_table=11 NZ_CP087814.1 RefSeq gene 981382 982734 . - . ID=gene-LP088_RS05260;Name=LP088_RS05260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05260;old_locus_tag=LP088_05240 NZ_CP087814.1 Protein Homology CDS 981382 982734 . - 0 ID=cds-WP_078273445.1;Parent=gene-LP088_RS05260;Dbxref=Genbank:WP_078273445.1;Name=WP_078273445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513012.1;locus_tag=LP088_RS05260;product=lytic murein transglycosylase;protein_id=WP_078273445.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 982997 983627 . + . ID=gene-LP088_RS05265;Name=LP088_RS05265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS05265;old_locus_tag=LP088_05245;partial=true;pseudo=true;start_range=.,982997 NZ_CP087814.1 Protein Homology CDS 982997 983627 . + 0 ID=cds-LP088_RS05265;Parent=gene-LP088_RS05265;Note=programmed frameshift%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611661.1;locus_tag=LP088_RS05265;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,982997;transl_table=11 NZ_CP087814.1 RefSeq gene 983712 984473 . + . ID=gene-LP088_RS05270;Name=LP088_RS05270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05270;old_locus_tag=LP088_05250 NZ_CP087814.1 Protein Homology CDS 983712 984473 . + 0 ID=cds-WP_208624034.1-2;Parent=gene-LP088_RS05270;Dbxref=Genbank:WP_208624034.1;Name=WP_208624034.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF012870.2;locus_tag=LP088_RS05270;product=DDE-type integrase/transposase/recombinase;protein_id=WP_208624034.1;transl_table=11 NZ_CP087814.1 RefSeq gene 984498 985937 . - . ID=gene-LP088_RS05275;Name=LP088_RS05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05275;old_locus_tag=LP088_05255 NZ_CP087814.1 Protein Homology CDS 984498 985937 . - 0 ID=cds-WP_078273476.1;Parent=gene-LP088_RS05275;Dbxref=Genbank:WP_078273476.1;Name=WP_078273476.1;Ontology_term=GO:0009063,GO:0003941,GO:0051539;gbkey=CDS;go_function=L-serine ammonia-lyase activity|0003941||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443397.1;locus_tag=LP088_RS05275;product=L-serine ammonia-lyase;protein_id=WP_078273476.1;transl_table=11 NZ_CP087814.1 RefSeq gene 986163 987086 . - . ID=gene-LP088_RS05280;Name=LP088_RS05280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05280;old_locus_tag=LP088_05260 NZ_CP087814.1 Protein Homology CDS 986163 987086 . - 0 ID=cds-WP_078273478.1;Parent=gene-LP088_RS05280;Dbxref=Genbank:WP_078273478.1;Name=WP_078273478.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026253.2;locus_tag=LP088_RS05280;product=WG repeat-containing protein;protein_id=WP_078273478.1;transl_table=11 NZ_CP087814.1 RefSeq gene 987265 988686 . + . ID=gene-LP088_RS05285;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=LP088_RS05285;old_locus_tag=LP088_05265 NZ_CP087814.1 Protein Homology CDS 987265 988686 . + 0 ID=cds-WP_264676231.1;Parent=gene-LP088_RS05285;Dbxref=Genbank:WP_264676231.1;Name=WP_264676231.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019518635.1;locus_tag=LP088_RS05285;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_264676231.1;transl_table=11 NZ_CP087814.1 RefSeq gene 988752 989186 . + . ID=gene-LP088_RS05290;Name=LP088_RS05290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05290;old_locus_tag=LP088_05270 NZ_CP087814.1 GeneMarkS-2+ CDS 988752 989186 . + 0 ID=cds-WP_264676232.1;Parent=gene-LP088_RS05290;Dbxref=Genbank:WP_264676232.1;Name=WP_264676232.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS05290;product=hypothetical protein;protein_id=WP_264676232.1;transl_table=11 NZ_CP087814.1 RefSeq gene 989248 989781 . + . ID=gene-LP088_RS05295;Name=LP088_RS05295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05295;old_locus_tag=LP088_05275 NZ_CP087814.1 Protein Homology CDS 989248 989781 . + 0 ID=cds-WP_264676233.1;Parent=gene-LP088_RS05295;Dbxref=Genbank:WP_264676233.1;Name=WP_264676233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019518639.1;locus_tag=LP088_RS05295;product=YbhB/YbcL family Raf kinase inhibitor-like protein;protein_id=WP_264676233.1;transl_table=11 NZ_CP087814.1 RefSeq gene 989801 990106 . + . ID=gene-LP088_RS05300;Name=LP088_RS05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05300;old_locus_tag=LP088_05280 NZ_CP087814.1 GeneMarkS-2+ CDS 989801 990106 . + 0 ID=cds-WP_078273483.1;Parent=gene-LP088_RS05300;Dbxref=Genbank:WP_078273483.1;Name=WP_078273483.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS05300;product=hypothetical protein;protein_id=WP_078273483.1;transl_table=11 NZ_CP087814.1 RefSeq gene 990096 990518 . + . ID=gene-LP088_RS05305;Name=LP088_RS05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05305;old_locus_tag=LP088_05285 NZ_CP087814.1 Protein Homology CDS 990096 990518 . + 0 ID=cds-WP_264676234.1;Parent=gene-LP088_RS05305;Dbxref=Genbank:WP_264676234.1;Name=WP_264676234.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013970.2;locus_tag=LP088_RS05305;product=PIN domain-containing protein;protein_id=WP_264676234.1;transl_table=11 NZ_CP087814.1 RefSeq gene 990533 991183 . + . ID=gene-LP088_RS05310;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=LP088_RS05310;old_locus_tag=LP088_05290 NZ_CP087814.1 Protein Homology CDS 990533 991183 . + 0 ID=cds-WP_264676235.1;Parent=gene-LP088_RS05310;Dbxref=Genbank:WP_264676235.1;Name=WP_264676235.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016542413.1;locus_tag=LP088_RS05310;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_264676235.1;transl_table=11 NZ_CP087814.1 RefSeq gene 991252 992322 . + . ID=gene-LP088_RS05315;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=LP088_RS05315;old_locus_tag=LP088_05295 NZ_CP087814.1 Protein Homology CDS 991252 992322 . + 0 ID=cds-WP_078273486.1;Parent=gene-LP088_RS05315;Dbxref=Genbank:WP_078273486.1;Name=WP_078273486.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004462974.1;locus_tag=LP088_RS05315;product=3-isopropylmalate dehydrogenase;protein_id=WP_078273486.1;transl_table=11 NZ_CP087814.1 RefSeq gene 992694 993677 . + . ID=gene-LP088_RS05320;Name=LP088_RS05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05320;old_locus_tag=LP088_05300 NZ_CP087814.1 Protein Homology CDS 992694 993677 . + 0 ID=cds-WP_158079606.1;Parent=gene-LP088_RS05320;Dbxref=Genbank:WP_158079606.1;Name=WP_158079606.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023166.2;locus_tag=LP088_RS05320;product=RsiV family protein;protein_id=WP_158079606.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 993870 994399 . + . ID=gene-LP088_RS05325;Name=LP088_RS05325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS05325;old_locus_tag=LP088_05305;pseudo=true NZ_CP087814.1 Protein Homology CDS 993870 994399 . + 0 ID=cds-LP088_RS05325;Parent=gene-LP088_RS05325;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016176.2;locus_tag=LP088_RS05325;product=YceI family protein;pseudo=true;transl_table=11 NZ_CP087814.1 RefSeq gene 994595 996220 . - . ID=gene-LP088_RS05330;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=LP088_RS05330;old_locus_tag=LP088_05310 NZ_CP087814.1 Protein Homology CDS 994595 996220 . - 0 ID=cds-WP_228157799.1;Parent=gene-LP088_RS05330;Dbxref=Genbank:WP_228157799.1;Name=WP_228157799.1;Ontology_term=GO:0045454,GO:0003957,GO:0050660;gbkey=CDS;gene=sthA;go_function=NAD(P)+ transhydrogenase (B-specific) activity|0003957||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007393739.1;locus_tag=LP088_RS05330;product=Si-specific NAD(P)(+) transhydrogenase;protein_id=WP_228157799.1;transl_table=11 NZ_CP087814.1 RefSeq gene 996246 996614 . - . ID=gene-LP088_RS05335;Name=LP088_RS05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05335;old_locus_tag=LP088_05315 NZ_CP087814.1 Protein Homology CDS 996246 996614 . - 0 ID=cds-WP_112742138.1;Parent=gene-LP088_RS05335;Dbxref=Genbank:WP_112742138.1;Name=WP_112742138.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025660.2;locus_tag=LP088_RS05335;product=DUF4377 domain-containing protein;protein_id=WP_112742138.1;transl_table=11 NZ_CP087814.1 RefSeq gene 996654 997547 . - . ID=gene-LP088_RS05340;Name=LP088_RS05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05340;old_locus_tag=LP088_05320 NZ_CP087814.1 Protein Homology CDS 996654 997547 . - 0 ID=cds-WP_112742139.1;Parent=gene-LP088_RS05340;Dbxref=Genbank:WP_112742139.1;Name=WP_112742139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657882.1;locus_tag=LP088_RS05340;product=kinase/pyrophosphorylase;protein_id=WP_112742139.1;transl_table=11 NZ_CP087814.1 RefSeq gene 997916 999421 . + . ID=gene-LP088_RS05345;Name=LP088_RS05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05345;old_locus_tag=LP088_05325 NZ_CP087814.1 Protein Homology CDS 997916 999421 . + 0 ID=cds-WP_264676236.1;Parent=gene-LP088_RS05345;Dbxref=Genbank:WP_264676236.1;Name=WP_264676236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003665653.1;locus_tag=LP088_RS05345;product=MBOAT family protein;protein_id=WP_264676236.1;transl_table=11 NZ_CP087814.1 RefSeq gene 999445 1000647 . + . ID=gene-LP088_RS05350;Name=LP088_RS05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05350;old_locus_tag=LP088_05330 NZ_CP087814.1 Protein Homology CDS 999445 1000647 . + 0 ID=cds-WP_078273491.1;Parent=gene-LP088_RS05350;Dbxref=Genbank:WP_078273491.1;Name=WP_078273491.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016218.2;locus_tag=LP088_RS05350;product=DUF459 domain-containing protein;protein_id=WP_078273491.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1000679 1001947 . + . ID=gene-LP088_RS05355;Name=LP088_RS05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05355;old_locus_tag=LP088_05335 NZ_CP087814.1 Protein Homology CDS 1000679 1001947 . + 0 ID=cds-WP_078273492.1;Parent=gene-LP088_RS05355;Dbxref=Genbank:WP_078273492.1;Name=WP_078273492.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024863.2;locus_tag=LP088_RS05355;product=GDSL-type esterase/lipase family protein;protein_id=WP_078273492.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1002077 1004437 . + . ID=gene-LP088_RS05360;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;locus_tag=LP088_RS05360;old_locus_tag=LP088_05340 NZ_CP087814.1 Protein Homology CDS 1002077 1004437 . + 0 ID=cds-WP_115369710.1;Parent=gene-LP088_RS05360;Dbxref=Genbank:WP_115369710.1;Name=WP_115369710.1;Ontology_term=GO:0006090,GO:0016310,GO:0005524,GO:0008986,GO:0016772;gbkey=CDS;gene=ppsA;go_function=ATP binding|0005524||IEA,pyruvate%2C water dikinase activity|0008986||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=pyruvate metabolic process|0006090||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000388265.1;locus_tag=LP088_RS05360;product=phosphoenolpyruvate synthase;protein_id=WP_115369710.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1004567 1004652 . + . ID=gene-LP088_RS05365;Name=LP088_RS05365;gbkey=Gene;gene_biotype=tRNA;locus_tag=LP088_RS05365;old_locus_tag=LP088_05345 NZ_CP087814.1 tRNAscan-SE tRNA 1004567 1004652 . + . ID=rna-LP088_RS05365;Parent=gene-LP088_RS05365;anticodon=(pos:1004601..1004603);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS05365;product=tRNA-Leu NZ_CP087814.1 tRNAscan-SE exon 1004567 1004652 . + . ID=exon-LP088_RS05365-1;Parent=rna-LP088_RS05365;anticodon=(pos:1004601..1004603);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS05365;product=tRNA-Leu NZ_CP087814.1 RefSeq gene 1004808 1006169 . + . ID=gene-LP088_RS05370;Name=LP088_RS05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05370;old_locus_tag=LP088_05350 NZ_CP087814.1 Protein Homology CDS 1004808 1006169 . + 0 ID=cds-WP_078273494.1;Parent=gene-LP088_RS05370;Dbxref=Genbank:WP_078273494.1;Name=WP_078273494.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF012798.2;locus_tag=LP088_RS05370;product=site-specific integrase;protein_id=WP_078273494.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 1006445 1006660 . + . ID=gene-LP088_RS05375;Name=LP088_RS05375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS05375;old_locus_tag=LP088_05355;partial=true;pseudo=true;start_range=.,1006445 NZ_CP087814.1 Protein Homology CDS 1006445 1006660 . + 0 ID=cds-LP088_RS05375;Parent=gene-LP088_RS05375;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025120.2;locus_tag=LP088_RS05375;partial=true;product=helix-turn-helix transcriptional regulator;pseudo=true;start_range=.,1006445;transl_table=11 NZ_CP087814.1 RefSeq gene 1006663 1006887 . + . ID=gene-LP088_RS05380;Name=LP088_RS05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05380;old_locus_tag=LP088_05360 NZ_CP087814.1 Protein Homology CDS 1006663 1006887 . + 0 ID=cds-WP_078273496.1;Parent=gene-LP088_RS05380;Dbxref=Genbank:WP_078273496.1;Name=WP_078273496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012536625.1;locus_tag=LP088_RS05380;product=hypothetical protein;protein_id=WP_078273496.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1006880 1007137 . + . ID=gene-LP088_RS05385;Name=LP088_RS05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05385;old_locus_tag=LP088_05365 NZ_CP087814.1 Protein Homology CDS 1006880 1007137 . + 0 ID=cds-WP_078273497.1;Parent=gene-LP088_RS05385;Dbxref=Genbank:WP_078273497.1;Name=WP_078273497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013904578.1;locus_tag=LP088_RS05385;product=type II toxin-antitoxin system YafQ family toxin;protein_id=WP_078273497.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1007151 1007411 . + . ID=gene-LP088_RS05390;Name=LP088_RS05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05390;old_locus_tag=LP088_05370 NZ_CP087814.1 GeneMarkS-2+ CDS 1007151 1007411 . + 0 ID=cds-WP_078273498.1;Parent=gene-LP088_RS05390;Dbxref=Genbank:WP_078273498.1;Name=WP_078273498.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS05390;product=hypothetical protein;protein_id=WP_078273498.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1007509 1007766 . + . ID=gene-LP088_RS05395;Name=LP088_RS05395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05395;old_locus_tag=LP088_05375 NZ_CP087814.1 Protein Homology CDS 1007509 1007766 . + 0 ID=cds-WP_078273499.1;Parent=gene-LP088_RS05395;Dbxref=Genbank:WP_078273499.1;Name=WP_078273499.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020265.2;locus_tag=LP088_RS05395;product=DUF1778 domain-containing protein;protein_id=WP_078273499.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1007756 1008208 . + . ID=gene-LP088_RS05400;Name=LP088_RS05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05400;old_locus_tag=LP088_05380 NZ_CP087814.1 GeneMarkS-2+ CDS 1007756 1008208 . + 0 ID=cds-WP_078273500.1;Parent=gene-LP088_RS05400;Dbxref=Genbank:WP_078273500.1;Name=WP_078273500.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS05400;product=hypothetical protein;protein_id=WP_078273500.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1008357 1009088 . + . ID=gene-LP088_RS05405;Name=LP088_RS05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05405;old_locus_tag=LP088_05385 NZ_CP087814.1 GeneMarkS-2+ CDS 1008357 1009088 . + 0 ID=cds-WP_078273501.1;Parent=gene-LP088_RS05405;Dbxref=Genbank:WP_078273501.1;Name=WP_078273501.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS05405;product=hypothetical protein;protein_id=WP_078273501.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1009245 1009448 . + . ID=gene-LP088_RS05410;Name=LP088_RS05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05410;old_locus_tag=LP088_05390 NZ_CP087814.1 Protein Homology CDS 1009245 1009448 . + 0 ID=cds-WP_078273503.1;Parent=gene-LP088_RS05410;Dbxref=Genbank:WP_078273503.1;Name=WP_078273503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003670252.1;locus_tag=LP088_RS05410;product=AlpA family phage regulatory protein;protein_id=WP_078273503.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1009445 1009693 . + . ID=gene-LP088_RS05415;Name=LP088_RS05415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05415;old_locus_tag=LP088_05395 NZ_CP087814.1 Protein Homology CDS 1009445 1009693 . + 0 ID=cds-WP_115369716.1;Parent=gene-LP088_RS05415;Dbxref=Genbank:WP_115369716.1;Name=WP_115369716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013108180.1;locus_tag=LP088_RS05415;product=hypothetical protein;protein_id=WP_115369716.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1010209 1010433 . + . ID=gene-LP088_RS05420;Name=LP088_RS05420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05420;old_locus_tag=LP088_05400 NZ_CP087814.1 GeneMarkS-2+ CDS 1010209 1010433 . + 0 ID=cds-WP_264676708.1;Parent=gene-LP088_RS05420;Dbxref=Genbank:WP_264676708.1;Name=WP_264676708.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS05420;product=hypothetical protein;protein_id=WP_264676708.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1011028 1011270 . + . ID=gene-LP088_RS05425;Name=LP088_RS05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05425;old_locus_tag=LP088_05405 NZ_CP087814.1 GeneMarkS-2+ CDS 1011028 1011270 . + 0 ID=cds-WP_264676019.1;Parent=gene-LP088_RS05425;Dbxref=Genbank:WP_264676019.1;Name=WP_264676019.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS05425;product=hypothetical protein;protein_id=WP_264676019.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1011257 1013512 . + . ID=gene-LP088_RS05430;Name=LP088_RS05430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05430;old_locus_tag=LP088_05410 NZ_CP087814.1 Protein Homology CDS 1011257 1013512 . + 0 ID=cds-WP_264676020.1;Parent=gene-LP088_RS05430;Dbxref=Genbank:WP_264676020.1;Name=WP_264676020.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017826.2;locus_tag=LP088_RS05430;product=DUF927 domain-containing protein;protein_id=WP_264676020.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1014498 1015454 . + . ID=gene-LP088_RS05435;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=LP088_RS05435;old_locus_tag=LP088_05415 NZ_CP087814.1 Protein Homology CDS 1014498 1015454 . + 0 ID=cds-WP_264676237.1;Parent=gene-LP088_RS05435;Dbxref=Genbank:WP_264676237.1;Name=WP_264676237.1;Ontology_term=GO:0006426,GO:0004820,GO:0009345;gbkey=CDS;gene=glyQ;go_component=glycine-tRNA ligase complex|0009345||IEA;go_function=glycine-tRNA ligase activity|0004820||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444216.1;locus_tag=LP088_RS05435;product=glycine--tRNA ligase subunit alpha;protein_id=WP_264676237.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1015492 1015944 . + . ID=gene-LP088_RS05440;Name=LP088_RS05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05440;old_locus_tag=LP088_05420 NZ_CP087814.1 GeneMarkS-2+ CDS 1015492 1015944 . + 0 ID=cds-WP_078273511.1;Parent=gene-LP088_RS05440;Dbxref=Genbank:WP_078273511.1;Name=WP_078273511.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS05440;product=hypothetical protein;protein_id=WP_078273511.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1015970 1016155 . + . ID=gene-LP088_RS05445;Name=LP088_RS05445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05445;old_locus_tag=LP088_05425 NZ_CP087814.1 GeneMarkS-2+ CDS 1015970 1016155 . + 0 ID=cds-WP_078273512.1;Parent=gene-LP088_RS05445;Dbxref=Genbank:WP_078273512.1;Name=WP_078273512.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS05445;product=hypothetical protein;protein_id=WP_078273512.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1016149 1016511 . + . ID=gene-LP088_RS05450;Name=LP088_RS05450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05450;old_locus_tag=LP088_05430 NZ_CP087814.1 GeneMarkS-2+ CDS 1016149 1016511 . + 0 ID=cds-WP_228157800.1;Parent=gene-LP088_RS05450;Dbxref=Genbank:WP_228157800.1;Name=WP_228157800.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS05450;product=hypothetical protein;protein_id=WP_228157800.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1016492 1016698 . + . ID=gene-LP088_RS05455;Name=LP088_RS05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05455;old_locus_tag=LP088_05435 NZ_CP087814.1 GeneMarkS-2+ CDS 1016492 1016698 . + 0 ID=cds-WP_228157801.1;Parent=gene-LP088_RS05455;Dbxref=Genbank:WP_228157801.1;Name=WP_228157801.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS05455;product=hypothetical protein;protein_id=WP_228157801.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1016728 1018821 . + . ID=gene-LP088_RS05460;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=LP088_RS05460;old_locus_tag=LP088_05440 NZ_CP087814.1 Protein Homology CDS 1016728 1018821 . + 0 ID=cds-WP_264676238.1;Parent=gene-LP088_RS05460;Dbxref=Genbank:WP_264676238.1;Name=WP_264676238.1;Ontology_term=GO:0006426,GO:0004820,GO:0009345;gbkey=CDS;gene=glyS;go_component=glycine-tRNA ligase complex|0009345||IEA;go_function=glycine-tRNA ligase activity|0004820||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005001973.1;locus_tag=LP088_RS05460;product=glycine--tRNA ligase subunit beta;protein_id=WP_264676238.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1018937 1020319 . - . ID=gene-LP088_RS05465;Name=LP088_RS05465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05465;old_locus_tag=LP088_05445 NZ_CP087814.1 Protein Homology CDS 1018937 1020319 . - 0 ID=cds-WP_078273514.1;Parent=gene-LP088_RS05465;Dbxref=Genbank:WP_078273514.1;Name=WP_078273514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009501400.1;locus_tag=LP088_RS05465;product=serine hydroxymethyltransferase;protein_id=WP_078273514.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1020463 1020918 . - . ID=gene-LP088_RS05470;Name=LP088_RS05470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05470;old_locus_tag=LP088_05450 NZ_CP087814.1 Protein Homology CDS 1020463 1020918 . - 0 ID=cds-WP_078273515.1;Parent=gene-LP088_RS05470;Dbxref=Genbank:WP_078273515.1;Name=WP_078273515.1;Ontology_term=GO:0006744,GO:0008813,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=chorismate lyase activity|0008813||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442673.1;locus_tag=LP088_RS05470;product=chorismate lyase;protein_id=WP_078273515.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1021340 1022938 . + . ID=gene-LP088_RS05475;Name=LP088_RS05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05475;old_locus_tag=LP088_05455 NZ_CP087814.1 Protein Homology CDS 1021340 1022938 . + 0 ID=cds-WP_078273516.1;Parent=gene-LP088_RS05475;Dbxref=Genbank:WP_078273516.1;Name=WP_078273516.1;Ontology_term=GO:0019752,GO:0004451;gbkey=CDS;go_function=isocitrate lyase activity|0004451||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008942038.1;locus_tag=LP088_RS05475;product=isocitrate lyase;protein_id=WP_078273516.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1023135 1025300 . + . ID=gene-LP088_RS05480;Name=LP088_RS05480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05480;old_locus_tag=LP088_05460 NZ_CP087814.1 Protein Homology CDS 1023135 1025300 . + 0 ID=cds-WP_078273517.1;Parent=gene-LP088_RS05480;Dbxref=Genbank:WP_078273517.1;Name=WP_078273517.1;Ontology_term=GO:0006097,GO:0004474;gbkey=CDS;go_function=malate synthase activity|0004474||IEA;go_process=glyoxylate cycle|0006097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013108173.1;locus_tag=LP088_RS05480;product=malate synthase G;protein_id=WP_078273517.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1025346 1025717 . - . ID=gene-LP088_RS05485;Name=LP088_RS05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05485;old_locus_tag=LP088_05465 NZ_CP087814.1 GeneMarkS-2+ CDS 1025346 1025717 . - 0 ID=cds-WP_078273518.1;Parent=gene-LP088_RS05485;Dbxref=Genbank:WP_078273518.1;Name=WP_078273518.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS05485;product=hypothetical protein;protein_id=WP_078273518.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1025727 1025888 . - . ID=gene-LP088_RS05490;Name=LP088_RS05490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05490 NZ_CP087814.1 Protein Homology CDS 1025727 1025888 . - 0 ID=cds-WP_264676239.1;Parent=gene-LP088_RS05490;Dbxref=Genbank:WP_264676239.1;Name=WP_264676239.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013933.2;locus_tag=LP088_RS05490;product=hypothetical protein;protein_id=WP_264676239.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1025861 1026316 . - . ID=gene-LP088_RS05495;Name=LP088_RS05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05495 NZ_CP087814.1 Protein Homology CDS 1025861 1026316 . - 0 ID=cds-WP_264676240.1;Parent=gene-LP088_RS05495;Dbxref=Genbank:WP_264676240.1;Name=WP_264676240.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: protein motif:HMM:NF013933.2;locus_tag=LP088_RS05495;product=LysE family transporter;protein_id=WP_264676240.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1026613 1028166 . - . ID=gene-LP088_RS05500;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=LP088_RS05500;old_locus_tag=LP088_05475 NZ_CP087814.1 Protein Homology CDS 1026613 1028166 . - 0 ID=cds-WP_029102218.1;Parent=gene-LP088_RS05500;Dbxref=Genbank:WP_029102218.1;Name=WP_029102218.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657561.1;locus_tag=LP088_RS05500;product=signal recognition particle protein;protein_id=WP_029102218.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1028277 1029071 . + . ID=gene-LP088_RS05505;Name=ccsA;gbkey=Gene;gene=ccsA;gene_biotype=protein_coding;locus_tag=LP088_RS05505;old_locus_tag=LP088_05480 NZ_CP087814.1 Protein Homology CDS 1028277 1029071 . + 0 ID=cds-WP_208624087.1;Parent=gene-LP088_RS05505;Dbxref=Genbank:WP_208624087.1;Name=WP_208624087.1;Ontology_term=GO:0017004,GO:0020037;gbkey=CDS;gene=ccsA;go_function=heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657562.1;locus_tag=LP088_RS05505;product=cytochrome c biogenesis protein CcsA;protein_id=WP_208624087.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1029259 1029636 . + . ID=gene-LP088_RS05510;Name=LP088_RS05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05510;old_locus_tag=LP088_05485 NZ_CP087814.1 Protein Homology CDS 1029259 1029636 . + 0 ID=cds-WP_162860372.1;Parent=gene-LP088_RS05510;Dbxref=Genbank:WP_162860372.1;Name=WP_162860372.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026253.2;locus_tag=LP088_RS05510;product=WG repeat-containing protein;protein_id=WP_162860372.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1029652 1030047 . + . ID=gene-LP088_RS05515;Name=LP088_RS05515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05515;old_locus_tag=LP088_05490 NZ_CP087814.1 Protein Homology CDS 1029652 1030047 . + 0 ID=cds-WP_112742148.1;Parent=gene-LP088_RS05515;Dbxref=Genbank:WP_112742148.1;Name=WP_112742148.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026253.2;locus_tag=LP088_RS05515;product=WG repeat-containing protein;protein_id=WP_112742148.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1030056 1031075 . + . ID=gene-LP088_RS05520;Name=LP088_RS05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05520;old_locus_tag=LP088_05495 NZ_CP087814.1 Protein Homology CDS 1030056 1031075 . + 0 ID=cds-WP_078273521.1;Parent=gene-LP088_RS05520;Dbxref=Genbank:WP_078273521.1;Name=WP_078273521.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026253.2;locus_tag=LP088_RS05520;product=WG repeat-containing protein;protein_id=WP_078273521.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1031107 1032078 . - . ID=gene-LP088_RS05525;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=protein_coding;locus_tag=LP088_RS05525;old_locus_tag=LP088_05500 NZ_CP087814.1 Protein Homology CDS 1031107 1032078 . - 0 ID=cds-WP_078273537.1;Parent=gene-LP088_RS05525;Dbxref=Genbank:WP_078273537.1;Name=WP_078273537.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusA;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520074.1;locus_tag=LP088_RS05525;product=tRNA dihydrouridine(20/20a) synthase DusA;protein_id=WP_078273537.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1032141 1032716 . - . ID=gene-LP088_RS05530;Name=LP088_RS05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05530;old_locus_tag=LP088_05505 NZ_CP087814.1 Protein Homology CDS 1032141 1032716 . - 0 ID=cds-WP_078273522.1;Parent=gene-LP088_RS05530;Dbxref=Genbank:WP_078273522.1;Name=WP_078273522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019673283.1;locus_tag=LP088_RS05530;product=GNAT family N-acetyltransferase;protein_id=WP_078273522.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1032778 1034172 . - . ID=gene-LP088_RS05535;Name=LP088_RS05535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05535;old_locus_tag=LP088_05510 NZ_CP087814.1 Protein Homology CDS 1032778 1034172 . - 0 ID=cds-WP_078273523.1;Parent=gene-LP088_RS05535;Dbxref=Genbank:WP_078273523.1;Name=WP_078273523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003666495.1;locus_tag=LP088_RS05535;product=DUF3482 domain-containing protein;protein_id=WP_078273523.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1034379 1035524 . + . ID=gene-LP088_RS05540;Name=LP088_RS05540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05540;old_locus_tag=LP088_05515 NZ_CP087814.1 Protein Homology CDS 1034379 1035524 . + 0 ID=cds-WP_078273524.1;Parent=gene-LP088_RS05540;Dbxref=Genbank:WP_078273524.1;Name=WP_078273524.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003673095.1;locus_tag=LP088_RS05540;product=beta-ketoacyl-ACP synthase III;protein_id=WP_078273524.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1035595 1036161 . - . ID=gene-LP088_RS05545;Name=LP088_RS05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05545;old_locus_tag=LP088_05520 NZ_CP087814.1 Protein Homology CDS 1035595 1036161 . - 0 ID=cds-WP_078273525.1;Parent=gene-LP088_RS05545;Dbxref=Genbank:WP_078273525.1;Name=WP_078273525.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024911.2;locus_tag=LP088_RS05545;product=ATP-binding protein;protein_id=WP_078273525.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1036219 1037352 . + . ID=gene-LP088_RS05550;Name=trmA;gbkey=Gene;gene=trmA;gene_biotype=protein_coding;locus_tag=LP088_RS05550;old_locus_tag=LP088_05525 NZ_CP087814.1 Protein Homology CDS 1036219 1037352 . + 0 ID=cds-WP_112742810.1;Parent=gene-LP088_RS05550;Dbxref=Genbank:WP_112742810.1;Name=WP_112742810.1;Ontology_term=GO:0006400,GO:0030697;gbkey=CDS;gene=trmA;go_function=S-adenosylmethionine-dependent tRNA (m5U54) methyltransferase activity|0030697||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009387104.1;locus_tag=LP088_RS05550;product=tRNA (uridine(54)-C5)-methyltransferase TrmA;protein_id=WP_112742810.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1037403 1037987 . - . ID=gene-LP088_RS05555;Name=LP088_RS05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05555;old_locus_tag=LP088_05530 NZ_CP087814.1 Protein Homology CDS 1037403 1037987 . - 0 ID=cds-WP_162860464.1;Parent=gene-LP088_RS05555;Dbxref=Genbank:WP_162860464.1;Name=WP_162860464.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037202.2;locus_tag=LP088_RS05555;product=type III restriction endonuclease subunit R;protein_id=WP_162860464.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1038089 1039000 . + . ID=gene-LP088_RS05560;Name=LP088_RS05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05560;old_locus_tag=LP088_05535 NZ_CP087814.1 Protein Homology CDS 1038089 1039000 . + 0 ID=cds-WP_078275357.1-3;Parent=gene-LP088_RS05560;Dbxref=Genbank:WP_078275357.1;Name=WP_078275357.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004282326.1;locus_tag=LP088_RS05560;product=IS982 family transposase;protein_id=WP_078275357.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1038948 1043222 . - . ID=gene-LP088_RS05565;Name=LP088_RS05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05565;old_locus_tag=LP088_05540 NZ_CP087814.1 Protein Homology CDS 1038948 1043222 . - 0 ID=cds-WP_162860376.1;Parent=gene-LP088_RS05565;Dbxref=Genbank:WP_162860376.1;Name=WP_162860376.1;Ontology_term=GO:0003677,GO:0005524,GO:0016787;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF016724.2;locus_tag=LP088_RS05565;product=DEAD/DEAH box helicase family protein;protein_id=WP_162860376.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1043284 1043607 . + . ID=gene-LP088_RS05570;Name=LP088_RS05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05570;old_locus_tag=LP088_05545 NZ_CP087814.1 GeneMarkS-2+ CDS 1043284 1043607 . + 0 ID=cds-WP_228157802.1;Parent=gene-LP088_RS05570;Dbxref=Genbank:WP_228157802.1;Name=WP_228157802.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS05570;product=hypothetical protein;protein_id=WP_228157802.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1043558 1044637 . + . ID=gene-LP088_RS05575;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=LP088_RS05575;old_locus_tag=LP088_05550 NZ_CP087814.1 Protein Homology CDS 1043558 1044637 . + 0 ID=cds-WP_112742189.1;Parent=gene-LP088_RS05575;Dbxref=Genbank:WP_112742189.1;Name=WP_112742189.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003669771.1;locus_tag=LP088_RS05575;product=peptide chain release factor 1;protein_id=WP_112742189.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1044637 1044996 . + . ID=gene-LP088_RS05580;Name=LP088_RS05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05580;old_locus_tag=LP088_05555 NZ_CP087814.1 GeneMarkS-2+ CDS 1044637 1044996 . + 0 ID=cds-WP_147287360.1;Parent=gene-LP088_RS05580;Dbxref=Genbank:WP_147287360.1;Name=WP_147287360.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS05580;product=hypothetical protein;protein_id=WP_147287360.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1044996 1045235 . + . ID=gene-LP088_RS05585;Name=LP088_RS05585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05585;old_locus_tag=LP088_05560 NZ_CP087814.1 Protein Homology CDS 1044996 1045235 . + 0 ID=cds-WP_078273528.1;Parent=gene-LP088_RS05585;Dbxref=Genbank:WP_078273528.1;Name=WP_078273528.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022833.2;locus_tag=LP088_RS05585;product=DUF2798 domain-containing protein;protein_id=WP_078273528.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1045289 1045744 . + . ID=gene-LP088_RS05590;Name=LP088_RS05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05590;old_locus_tag=LP088_05565 NZ_CP087814.1 GeneMarkS-2+ CDS 1045289 1045744 . + 0 ID=cds-WP_112742191.1;Parent=gene-LP088_RS05590;Dbxref=Genbank:WP_112742191.1;Name=WP_112742191.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS05590;product=hypothetical protein;protein_id=WP_112742191.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1045732 1045920 . + . ID=gene-LP088_RS05595;Name=LP088_RS05595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05595;old_locus_tag=LP088_05570 NZ_CP087814.1 GeneMarkS-2+ CDS 1045732 1045920 . + 0 ID=cds-WP_078273530.1;Parent=gene-LP088_RS05595;Dbxref=Genbank:WP_078273530.1;Name=WP_078273530.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS05595;product=hypothetical protein;protein_id=WP_078273530.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1045960 1046724 . + . ID=gene-LP088_RS05600;Name=LP088_RS05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05600;old_locus_tag=LP088_05575 NZ_CP087814.1 Protein Homology CDS 1045960 1046724 . + 0 ID=cds-WP_078273531.1;Parent=gene-LP088_RS05600;Dbxref=Genbank:WP_078273531.1;Name=WP_078273531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520481.1;locus_tag=LP088_RS05600;product=phospholipase D family protein;protein_id=WP_078273531.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1046797 1048314 . + . ID=gene-LP088_RS05605;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=LP088_RS05605;old_locus_tag=LP088_05580 NZ_CP087814.1 Protein Homology CDS 1046797 1048314 . + 0 ID=cds-WP_078273532.1;Parent=gene-LP088_RS05605;Dbxref=Genbank:WP_078273532.1;Name=WP_078273532.1;Ontology_term=GO:0006430,GO:0004824,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003659869.1;locus_tag=LP088_RS05605;product=lysine--tRNA ligase;protein_id=WP_078273532.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1048380 1048550 . + . ID=gene-LP088_RS05610;Name=LP088_RS05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05610;old_locus_tag=LP088_05585 NZ_CP087814.1 GeneMarkS-2+ CDS 1048380 1048550 . + 0 ID=cds-WP_158079609.1;Parent=gene-LP088_RS05610;Dbxref=Genbank:WP_158079609.1;Name=WP_158079609.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS05610;product=hypothetical protein;protein_id=WP_158079609.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1048570 1050057 . + . ID=gene-LP088_RS05615;Name=LP088_RS05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05615;old_locus_tag=LP088_05590 NZ_CP087814.1 Protein Homology CDS 1048570 1050057 . + 0 ID=cds-WP_264676247.1;Parent=gene-LP088_RS05615;Dbxref=Genbank:WP_264676247.1;Name=WP_264676247.1;Ontology_term=GO:0006812,GO:0055085,GO:0015299,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=solute:proton antiporter activity|0015299||IEA;go_process=cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004695584.1;locus_tag=LP088_RS05615;product=cation:proton antiporter;protein_id=WP_264676247.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1050100 1053663 . + . ID=gene-LP088_RS05620;Name=putA;gbkey=Gene;gene=putA;gene_biotype=protein_coding;locus_tag=LP088_RS05620;old_locus_tag=LP088_05595 NZ_CP087814.1 Protein Homology CDS 1050100 1053663 . + 0 ID=cds-WP_264676248.1;Parent=gene-LP088_RS05620;Dbxref=Genbank:WP_264676248.1;Name=WP_264676248.1;Ontology_term=GO:0006355,GO:0010133,GO:0003700,GO:0003842,GO:0004657,GO:0016620;gbkey=CDS;gene=putA;go_function=DNA-binding transcription factor activity|0003700||IEA,1-pyrroline-5-carboxylate dehydrogenase activity|0003842||IEA,proline dehydrogenase activity|0004657||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,proline catabolic process to glutamate|0010133||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003671062.1;locus_tag=LP088_RS05620;product=bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA;protein_id=WP_264676248.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1053772 1056807 . + . ID=gene-LP088_RS05625;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=LP088_RS05625 NZ_CP087814.1 Protein Homology CDS 1053772 1056807 . + 0 ID=cds-WP_264690422.1;Parent=gene-LP088_RS05625;Dbxref=Genbank:WP_264690422.1;Name=WP_264690422.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003663470.1;locus_tag=LP088_RS05625;product=DNA polymerase III subunit gamma/tau;protein_id=WP_264690422.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1056826 1057449 . - . ID=gene-LP088_RS05630;Name=can;gbkey=Gene;gene=can;gene_biotype=protein_coding;locus_tag=LP088_RS05630;old_locus_tag=LP088_05605 NZ_CP087814.1 Protein Homology CDS 1056826 1057449 . - 0 ID=cds-WP_078273174.1;Parent=gene-LP088_RS05630;Dbxref=Genbank:WP_078273174.1;Name=WP_078273174.1;Ontology_term=GO:0015976,GO:0004089,GO:0008270;gbkey=CDS;gene=can;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;go_process=carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009501473.1;locus_tag=LP088_RS05630;product=carbonate dehydratase;protein_id=WP_078273174.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1057471 1057647 . - . ID=gene-LP088_RS05635;Name=LP088_RS05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05635;old_locus_tag=LP088_05610 NZ_CP087814.1 GeneMarkS-2+ CDS 1057471 1057647 . - 0 ID=cds-WP_264676250.1;Parent=gene-LP088_RS05635;Dbxref=Genbank:WP_264676250.1;Name=WP_264676250.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS05635;product=hypothetical protein;protein_id=WP_264676250.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1057646 1058482 . + . ID=gene-LP088_RS05640;Name=LP088_RS05640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05640;old_locus_tag=LP088_05615 NZ_CP087814.1 Protein Homology CDS 1057646 1058482 . + 0 ID=cds-WP_115369790.1;Parent=gene-LP088_RS05640;Dbxref=Genbank:WP_115369790.1;Name=WP_115369790.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024934.2;locus_tag=LP088_RS05640;product=Crp/Fnr family transcriptional regulator;protein_id=WP_115369790.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1058484 1059143 . - . ID=gene-LP088_RS05645;Name=narL;gbkey=Gene;gene=narL;gene_biotype=protein_coding;locus_tag=LP088_RS05645;old_locus_tag=LP088_05620 NZ_CP087814.1 Protein Homology CDS 1058484 1059143 . - 0 ID=cds-WP_115369791.1;Parent=gene-LP088_RS05645;Dbxref=Genbank:WP_115369791.1;Name=WP_115369791.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=narL;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279891.1;locus_tag=LP088_RS05645;product=two-component system response regulator NarL;protein_id=WP_115369791.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1059238 1060332 . - . ID=gene-LP088_RS05650;Name=LP088_RS05650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05650;old_locus_tag=LP088_05625 NZ_CP087814.1 Protein Homology CDS 1059238 1060332 . - 0 ID=cds-WP_264676251.1;Parent=gene-LP088_RS05650;Dbxref=Genbank:WP_264676251.1;Name=WP_264676251.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: protein motif:HMM:NF019350.2;locus_tag=LP088_RS05650;product=histidine kinase;protein_id=WP_264676251.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1060329 1061285 . - . ID=gene-LP088_RS05655;Name=LP088_RS05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05655;old_locus_tag=LP088_05630 NZ_CP087814.1 Protein Homology CDS 1060329 1061285 . - 0 ID=cds-WP_147287361.1;Parent=gene-LP088_RS05655;Dbxref=Genbank:WP_147287361.1;Name=WP_147287361.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025055.2;locus_tag=LP088_RS05655;product=type IV pili methyl-accepting chemotaxis transducer N-terminal domain-containing protein;protein_id=WP_147287361.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1061601 1062863 . + . ID=gene-LP088_RS05660;Name=LP088_RS05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05660;old_locus_tag=LP088_05635 NZ_CP087814.1 Protein Homology CDS 1061601 1062863 . + 0 ID=cds-WP_264676252.1;Parent=gene-LP088_RS05660;Dbxref=Genbank:WP_264676252.1;Name=WP_264676252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009767268.1;locus_tag=LP088_RS05660;product=NarK/NasA family nitrate transporter;protein_id=WP_264676252.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1063028 1063696 . + . ID=gene-LP088_RS05665;Name=LP088_RS05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05665;old_locus_tag=LP088_05640 NZ_CP087814.1 Protein Homology CDS 1063028 1063696 . + 0 ID=cds-WP_078273169.1;Parent=gene-LP088_RS05665;Dbxref=Genbank:WP_078273169.1;Name=WP_078273169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514047.1;locus_tag=LP088_RS05665;product=glutathione S-transferase;protein_id=WP_078273169.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1063703 1064683 . - . ID=gene-LP088_RS05670;Name=LP088_RS05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05670;old_locus_tag=LP088_05645 NZ_CP087814.1 Protein Homology CDS 1063703 1064683 . - 0 ID=cds-WP_078273168.1;Parent=gene-LP088_RS05670;Dbxref=Genbank:WP_078273168.1;Name=WP_078273168.1;Ontology_term=GO:0006741,GO:0003951;gbkey=CDS;go_function=NAD+ kinase activity|0003951||IEA;go_process=NADP biosynthetic process|0006741||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007395237.1;locus_tag=LP088_RS05670;product=NAD(+) kinase;protein_id=WP_078273168.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1064924 1065646 . + . ID=gene-LP088_RS05675;Name=LP088_RS05675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05675;old_locus_tag=LP088_05650 NZ_CP087814.1 Protein Homology CDS 1064924 1065646 . + 0 ID=cds-WP_078273167.1;Parent=gene-LP088_RS05675;Dbxref=Genbank:WP_078273167.1;Name=WP_078273167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003672997.1;locus_tag=LP088_RS05675;product=Bax inhibitor-1/YccA family protein;protein_id=WP_078273167.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1065909 1067654 . + . ID=gene-LP088_RS05680;Name=LP088_RS05680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05680;old_locus_tag=LP088_05655 NZ_CP087814.1 Protein Homology CDS 1065909 1067654 . + 0 ID=cds-WP_228157805.1;Parent=gene-LP088_RS05680;Dbxref=Genbank:WP_228157805.1;Name=WP_228157805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011960949.1;locus_tag=LP088_RS05680;product=phospholipase D-like domain-containing protein;protein_id=WP_228157805.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1067893 1069281 . + . ID=gene-LP088_RS05685;Name=LP088_RS05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05685;old_locus_tag=LP088_05660 NZ_CP087814.1 Protein Homology CDS 1067893 1069281 . + 0 ID=cds-WP_078273165.1;Parent=gene-LP088_RS05685;Dbxref=Genbank:WP_078273165.1;Name=WP_078273165.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF012312.2;locus_tag=LP088_RS05685;product=MFS transporter;protein_id=WP_078273165.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 1069412 1069973 . - . ID=gene-LP088_RS05690;Name=LP088_RS05690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS05690;old_locus_tag=LP088_05665;pseudo=true NZ_CP087814.1 Protein Homology CDS 1069412 1069973 . - 0 ID=cds-LP088_RS05690;Parent=gene-LP088_RS05690;Note=frameshifted;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011959554.1;locus_tag=LP088_RS05690;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_CP087814.1 RefSeq gene 1070057 1070374 . + . ID=gene-LP088_RS05695;Name=LP088_RS05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05695 NZ_CP087814.1 Protein Homology CDS 1070057 1070374 . + 0 ID=cds-WP_208624088.1;Parent=gene-LP088_RS05695;Dbxref=Genbank:WP_208624088.1;Name=WP_208624088.1;Ontology_term=GO:0016705;gbkey=CDS;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA;inference=COORDINATES: protein motif:HMM:NF012517.2;locus_tag=LP088_RS05695;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_208624088.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1070277 1070813 . + . ID=gene-LP088_RS05700;Name=LP088_RS05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05700;old_locus_tag=LP088_05670 NZ_CP087814.1 Protein Homology CDS 1070277 1070813 . + 0 ID=cds-WP_208624089.1;Parent=gene-LP088_RS05700;Dbxref=Genbank:WP_208624089.1;Name=WP_208624089.1;Ontology_term=GO:0016705;gbkey=CDS;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA;inference=COORDINATES: protein motif:HMM:NF012517.2;locus_tag=LP088_RS05700;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_208624089.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1070797 1071216 . + . ID=gene-LP088_RS05705;Name=LP088_RS05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05705;old_locus_tag=LP088_05675 NZ_CP087814.1 GeneMarkS-2+ CDS 1070797 1071216 . + 0 ID=cds-WP_208624090.1;Parent=gene-LP088_RS05705;Dbxref=Genbank:WP_208624090.1;Name=WP_208624090.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS05705;product=hypothetical protein;protein_id=WP_208624090.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1071235 1071861 . - . ID=gene-LP088_RS05710;Name=LP088_RS05710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05710;old_locus_tag=LP088_05680 NZ_CP087814.1 Protein Homology CDS 1071235 1071861 . - 0 ID=cds-WP_078275434.1;Parent=gene-LP088_RS05710;Dbxref=Genbank:WP_078275434.1;Name=WP_078275434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519096.1;locus_tag=LP088_RS05710;product=hypothetical protein;protein_id=WP_078275434.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 1072076 1072706 . - . ID=gene-LP088_RS05715;Name=LP088_RS05715;end_range=1072706,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS05715;old_locus_tag=LP088_05685;partial=true;pseudo=true NZ_CP087814.1 Protein Homology CDS 1072076 1072706 . - 0 ID=cds-LP088_RS05715;Parent=gene-LP088_RS05715;Note=programmed frameshift%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=1072706,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611661.1;locus_tag=LP088_RS05715;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_CP087814.1 RefSeq gene 1072817 1073386 . + . ID=gene-LP088_RS05720;Name=LP088_RS05720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05720;old_locus_tag=LP088_05690 NZ_CP087814.1 Protein Homology CDS 1072817 1073386 . + 0 ID=cds-WP_112742194.1;Parent=gene-LP088_RS05720;Dbxref=Genbank:WP_112742194.1;Name=WP_112742194.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012927.2;locus_tag=LP088_RS05720;product=hypothetical protein;protein_id=WP_112742194.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1073414 1074016 . - . ID=gene-LP088_RS05725;Name=LP088_RS05725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05725;old_locus_tag=LP088_05695 NZ_CP087814.1 Protein Homology CDS 1073414 1074016 . - 0 ID=cds-WP_078273832.1;Parent=gene-LP088_RS05725;Dbxref=Genbank:WP_078273832.1;Name=WP_078273832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003658260.1;locus_tag=LP088_RS05725;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_078273832.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1074076 1075080 . - . ID=gene-LP088_RS05730;Name=LP088_RS05730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05730;old_locus_tag=LP088_05700 NZ_CP087814.1 Protein Homology CDS 1074076 1075080 . - 0 ID=cds-WP_078273833.1;Parent=gene-LP088_RS05730;Dbxref=Genbank:WP_078273833.1;Name=WP_078273833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003659723.1;locus_tag=LP088_RS05730;product=alpha/beta fold hydrolase;protein_id=WP_078273833.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1075087 1075251 . - . ID=gene-LP088_RS05735;Name=LP088_RS05735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05735;old_locus_tag=LP088_05705 NZ_CP087814.1 Protein Homology CDS 1075087 1075251 . - 0 ID=cds-WP_029102102.1;Parent=gene-LP088_RS05735;Dbxref=Genbank:WP_029102102.1;Name=WP_029102102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004994544.1;locus_tag=LP088_RS05735;product=rubredoxin;protein_id=WP_029102102.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1075351 1076271 . - . ID=gene-LP088_RS05740;Name=LP088_RS05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05740;old_locus_tag=LP088_05710 NZ_CP087814.1 Protein Homology CDS 1075351 1076271 . - 0 ID=cds-WP_078273856.1;Parent=gene-LP088_RS05740;Dbxref=Genbank:WP_078273856.1;Name=WP_078273856.1;Note=maintains the balance of metabolites in the pentose-phosphate pathway;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019672990.1;locus_tag=LP088_RS05740;product=transaldolase;protein_id=WP_078273856.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1076400 1076753 . - . ID=gene-LP088_RS05745;Name=LP088_RS05745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05745;old_locus_tag=LP088_05715 NZ_CP087814.1 GeneMarkS-2+ CDS 1076400 1076753 . - 0 ID=cds-WP_078273834.1;Parent=gene-LP088_RS05745;Dbxref=Genbank:WP_078273834.1;Name=WP_078273834.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS05745;product=hypothetical protein;protein_id=WP_078273834.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1076793 1076915 . - . ID=gene-LP088_RS05750;Name=LP088_RS05750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05750 NZ_CP087814.1 Protein Homology CDS 1076793 1076915 . - 0 ID=cds-WP_264676253.1;Parent=gene-LP088_RS05750;Dbxref=Genbank:WP_264676253.1;Name=WP_264676253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519441.1;locus_tag=LP088_RS05750;product=hypothetical protein;protein_id=WP_264676253.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1076951 1078258 . - . ID=gene-LP088_RS05755;Name=LP088_RS05755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05755;old_locus_tag=LP088_05720 NZ_CP087814.1 Protein Homology CDS 1076951 1078258 . - 0 ID=cds-WP_078273835.1;Parent=gene-LP088_RS05755;Dbxref=Genbank:WP_078273835.1;Name=WP_078273835.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015980.2;locus_tag=LP088_RS05755;product=PD40 domain-containing protein;protein_id=WP_078273835.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1078513 1079466 . - . ID=gene-LP088_RS05760;Name=LP088_RS05760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05760;old_locus_tag=LP088_05725 NZ_CP087814.1 GeneMarkS-2+ CDS 1078513 1079466 . - 0 ID=cds-WP_078273836.1;Parent=gene-LP088_RS05760;Dbxref=Genbank:WP_078273836.1;Name=WP_078273836.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS05760;product=hypothetical protein;protein_id=WP_078273836.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1079483 1079950 . - . ID=gene-LP088_RS05765;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;locus_tag=LP088_RS05765;old_locus_tag=LP088_05730 NZ_CP087814.1 Protein Homology CDS 1079483 1079950 . - 0 ID=cds-WP_078273837.1;Parent=gene-LP088_RS05765;Dbxref=Genbank:WP_078273837.1;Name=WP_078273837.1;Ontology_term=GO:0061024,GO:1902600,GO:0015078,GO:0098567;gbkey=CDS;gene=tolR;go_component=periplasmic side of plasma membrane|0098567||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=membrane organization|0061024||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019673385.1;locus_tag=LP088_RS05765;product=protein TolR;protein_id=WP_078273837.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1079959 1080645 . - . ID=gene-LP088_RS05770;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=LP088_RS05770;old_locus_tag=LP088_05735 NZ_CP087814.1 Protein Homology CDS 1079959 1080645 . - 0 ID=cds-WP_078273838.1;Parent=gene-LP088_RS05770;Dbxref=Genbank:WP_078273838.1;Name=WP_078273838.1;Ontology_term=GO:1902600,GO:0015078,GO:0005886;gbkey=CDS;gene=tolQ;go_component=plasma membrane|0005886||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443339.1;locus_tag=LP088_RS05770;product=protein TolQ;protein_id=WP_078273838.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1080825 1085033 . + . ID=gene-LP088_RS05775;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=protein_coding;locus_tag=LP088_RS05775;old_locus_tag=LP088_05740 NZ_CP087814.1 Protein Homology CDS 1080825 1085033 . + 0 ID=cds-WP_112742813.1;Parent=gene-LP088_RS05775;Dbxref=Genbank:WP_112742813.1;Name=WP_112742813.1;Ontology_term=GO:0006139,GO:0004386;gbkey=CDS;gene=hrpA;go_function=helicase activity|0004386||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004462944.1;locus_tag=LP088_RS05775;product=ATP-dependent RNA helicase HrpA;protein_id=WP_112742813.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1085037 1085678 . + . ID=gene-LP088_RS05780;Name=LP088_RS05780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05780;old_locus_tag=LP088_05745 NZ_CP087814.1 GeneMarkS-2+ CDS 1085037 1085678 . + 0 ID=cds-WP_078273839.1;Parent=gene-LP088_RS05780;Dbxref=Genbank:WP_078273839.1;Name=WP_078273839.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS05780;product=hypothetical protein;protein_id=WP_078273839.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1085741 1087135 . - . ID=gene-LP088_RS05785;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=LP088_RS05785;old_locus_tag=LP088_05750 NZ_CP087814.1 Protein Homology CDS 1085741 1087135 . - 0 ID=cds-WP_078273840.1;Parent=gene-LP088_RS05785;Dbxref=Genbank:WP_078273840.1;Name=WP_078273840.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003664385.1;locus_tag=LP088_RS05785;product=GTPase HflX;protein_id=WP_078273840.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1087735 1088652 . + . ID=gene-LP088_RS05790;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=LP088_RS05790;old_locus_tag=LP088_05755 NZ_CP087814.1 Protein Homology CDS 1087735 1088652 . + 0 ID=cds-WP_264676254.1;Parent=gene-LP088_RS05790;Dbxref=Genbank:WP_264676254.1;Name=WP_264676254.1;Ontology_term=GO:0009396,GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201455.1;locus_tag=LP088_RS05790;product=dihydropteroate synthase;protein_id=WP_264676254.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1088705 1089817 . + . ID=gene-LP088_RS05795;Name=LP088_RS05795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05795;old_locus_tag=LP088_05760 NZ_CP087814.1 GeneMarkS-2+ CDS 1088705 1089817 . + 0 ID=cds-WP_264676255.1;Parent=gene-LP088_RS05795;Dbxref=Genbank:WP_264676255.1;Name=WP_264676255.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS05795;product=hypothetical protein;protein_id=WP_264676255.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1089821 1090495 . + . ID=gene-LP088_RS05800;Name=LP088_RS05800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05800;old_locus_tag=LP088_05765 NZ_CP087814.1 Protein Homology CDS 1089821 1090495 . + 0 ID=cds-WP_264676256.1;Parent=gene-LP088_RS05800;Dbxref=Genbank:WP_264676256.1;Name=WP_264676256.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012894.2;locus_tag=LP088_RS05800;product=OmpA family protein;protein_id=WP_264676256.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1090492 1091352 . + . ID=gene-LP088_RS05805;Name=LP088_RS05805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05805;old_locus_tag=LP088_05770 NZ_CP087814.1 GeneMarkS-2+ CDS 1090492 1091352 . + 0 ID=cds-WP_115369809.1;Parent=gene-LP088_RS05805;Dbxref=Genbank:WP_115369809.1;Name=WP_115369809.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS05805;product=HNH endonuclease;protein_id=WP_115369809.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1091470 1091781 . + . ID=gene-LP088_RS05810;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=LP088_RS05810;old_locus_tag=LP088_05775 NZ_CP087814.1 Protein Homology CDS 1091470 1091781 . + 0 ID=cds-WP_078273844.1;Parent=gene-LP088_RS05810;Dbxref=Genbank:WP_078273844.1;Name=WP_078273844.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplU;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018677004.1;locus_tag=LP088_RS05810;product=50S ribosomal protein L21;protein_id=WP_078273844.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1091822 1092079 . + . ID=gene-LP088_RS05815;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=LP088_RS05815;old_locus_tag=LP088_05780 NZ_CP087814.1 Protein Homology CDS 1091822 1092079 . + 0 ID=cds-WP_029102112.1;Parent=gene-LP088_RS05815;Dbxref=Genbank:WP_029102112.1;Name=WP_029102112.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003659274.1;locus_tag=LP088_RS05815;product=50S ribosomal protein L27;protein_id=WP_029102112.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1092320 1092763 . - . ID=gene-LP088_RS05820;Name=LP088_RS05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05820;old_locus_tag=LP088_05785 NZ_CP087814.1 Protein Homology CDS 1092320 1092763 . - 0 ID=cds-WP_158079634.1;Parent=gene-LP088_RS05820;Dbxref=Genbank:WP_158079634.1;Name=WP_158079634.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014566.2;locus_tag=LP088_RS05820;product=CPBP family intramembrane metalloprotease;protein_id=WP_158079634.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1092879 1093076 . - . ID=gene-LP088_RS05825;Name=LP088_RS05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05825;old_locus_tag=LP088_05790 NZ_CP087814.1 GeneMarkS-2+ CDS 1092879 1093076 . - 0 ID=cds-WP_078273847.1;Parent=gene-LP088_RS05825;Dbxref=Genbank:WP_078273847.1;Name=WP_078273847.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS05825;product=hypothetical protein;protein_id=WP_078273847.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1093085 1093573 . - . ID=gene-LP088_RS05830;Name=LP088_RS05830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05830;old_locus_tag=LP088_05795 NZ_CP087814.1 GeneMarkS-2+ CDS 1093085 1093573 . - 0 ID=cds-WP_078273848.1;Parent=gene-LP088_RS05830;Dbxref=Genbank:WP_078273848.1;Name=WP_078273848.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS05830;product=hypothetical protein;protein_id=WP_078273848.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1093759 1094973 . + . ID=gene-LP088_RS05835;Name=cgtA;gbkey=Gene;gene=cgtA;gene_biotype=protein_coding;locus_tag=LP088_RS05835;old_locus_tag=LP088_05800 NZ_CP087814.1 Protein Homology CDS 1093759 1094973 . + 0 ID=cds-WP_078273849.1;Parent=gene-LP088_RS05835;Dbxref=Genbank:WP_078273849.1;Name=WP_078273849.1;Ontology_term=GO:0042254,GO:0005525;gbkey=CDS;gene=cgtA;go_function=GTP binding|0005525||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657433.1;locus_tag=LP088_RS05835;product=Obg family GTPase CgtA;protein_id=WP_078273849.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1094999 1096114 . + . ID=gene-LP088_RS05840;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=LP088_RS05840;old_locus_tag=LP088_05805 NZ_CP087814.1 Protein Homology CDS 1094999 1096114 . + 0 ID=cds-WP_078273850.1;Parent=gene-LP088_RS05840;Dbxref=Genbank:WP_078273850.1;Name=WP_078273850.1;Ontology_term=GO:0006561,GO:0004349;gbkey=CDS;gene=proB;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520522.1;locus_tag=LP088_RS05840;product=glutamate 5-kinase;protein_id=WP_078273850.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1096469 1097575 . + . ID=gene-LP088_RS05845;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=LP088_RS05845;old_locus_tag=LP088_05810 NZ_CP087814.1 Protein Homology CDS 1096469 1097575 . + 0 ID=cds-WP_078273851.1;Parent=gene-LP088_RS05845;Dbxref=Genbank:WP_078273851.1;Name=WP_078273851.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013108048.1;locus_tag=LP088_RS05845;product=uroporphyrinogen decarboxylase;protein_id=WP_078273851.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1097671 1098123 . - . ID=gene-LP088_RS05850;Name=LP088_RS05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05850;old_locus_tag=LP088_05815 NZ_CP087814.1 Protein Homology CDS 1097671 1098123 . - 0 ID=cds-WP_078273852.1;Parent=gene-LP088_RS05850;Dbxref=Genbank:WP_078273852.1;Name=WP_078273852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003665758.1;locus_tag=LP088_RS05850;product=acyl-CoA thioesterase;protein_id=WP_078273852.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1098279 1098701 . + . ID=gene-LP088_RS05855;Name=LP088_RS05855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05855;old_locus_tag=LP088_05820 NZ_CP087814.1 Protein Homology CDS 1098279 1098701 . + 0 ID=cds-WP_078273853.1;Parent=gene-LP088_RS05855;Dbxref=Genbank:WP_078273853.1;Name=WP_078273853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003671427.1;locus_tag=LP088_RS05855;product=HIT family protein;protein_id=WP_078273853.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1098708 1099187 . + . ID=gene-LP088_RS05860;Name=LP088_RS05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05860;old_locus_tag=LP088_05825 NZ_CP087814.1 Protein Homology CDS 1098708 1099187 . + 0 ID=cds-WP_112742196.1;Parent=gene-LP088_RS05860;Dbxref=Genbank:WP_112742196.1;Name=WP_112742196.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015004.2;locus_tag=LP088_RS05860;product=pyrimidine dimer DNA glycosylase/endonuclease V;protein_id=WP_112742196.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1099286 1099561 . + . ID=gene-LP088_RS05865;Name=LP088_RS05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05865;old_locus_tag=LP088_05830 NZ_CP087814.1 Protein Homology CDS 1099286 1099561 . + 0 ID=cds-WP_112742197.1;Parent=gene-LP088_RS05865;Dbxref=Genbank:WP_112742197.1;Name=WP_112742197.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025304.2;locus_tag=LP088_RS05865;product=helix-turn-helix domain-containing protein;protein_id=WP_112742197.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 1099558 1100188 . - . ID=gene-LP088_RS05870;Name=LP088_RS05870;end_range=1100188,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS05870;old_locus_tag=LP088_05835;partial=true;pseudo=true NZ_CP087814.1 Protein Homology CDS 1099558 1100188 . - 0 ID=cds-LP088_RS05870;Parent=gene-LP088_RS05870;Note=programmed frameshift%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=1100188,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611661.1;locus_tag=LP088_RS05870;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 1100325 1101044 . + . ID=gene-LP088_RS05875;Name=LP088_RS05875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS05875;old_locus_tag=LP088_05840;partial=true;pseudo=true;start_range=.,1100325 NZ_CP087814.1 Protein Homology CDS 1100325 1101044 . + 0 ID=cds-LP088_RS05875;Parent=gene-LP088_RS05875;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012478345.1;locus_tag=LP088_RS05875;partial=true;product=IS30 family transposase;pseudo=true;start_range=.,1100325;transl_table=11 NZ_CP087814.1 RefSeq gene 1101057 1101644 . - . ID=gene-LP088_RS05880;Name=LP088_RS05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05880;old_locus_tag=LP088_05845 NZ_CP087814.1 Protein Homology CDS 1101057 1101644 . - 0 ID=cds-WP_112742199.1;Parent=gene-LP088_RS05880;Dbxref=Genbank:WP_112742199.1;Name=WP_112742199.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: protein motif:HMM:NF015679.2;locus_tag=LP088_RS05880;product=L%2CD-transpeptidase family protein;protein_id=WP_112742199.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1101785 1102558 . - . ID=gene-LP088_RS05885;Name=LP088_RS05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05885;old_locus_tag=LP088_05850 NZ_CP087814.1 Protein Homology CDS 1101785 1102558 . - 0 ID=cds-WP_078275255.1;Parent=gene-LP088_RS05885;Dbxref=Genbank:WP_078275255.1;Name=WP_078275255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003659117.1;locus_tag=LP088_RS05885;product=ferredoxin--NADP reductase;protein_id=WP_078275255.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1102700 1103404 . + . ID=gene-LP088_RS05890;Name=tsaA;gbkey=Gene;gene=tsaA;gene_biotype=protein_coding;locus_tag=LP088_RS05890;old_locus_tag=LP088_05855 NZ_CP087814.1 Protein Homology CDS 1102700 1103404 . + 0 ID=cds-WP_078275256.1;Parent=gene-LP088_RS05890;Dbxref=Genbank:WP_078275256.1;Name=WP_078275256.1;Ontology_term=GO:0006400,GO:0008757,GO:0005737;gbkey=CDS;gene=tsaA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003659120.1;locus_tag=LP088_RS05890;product=tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO;protein_id=WP_078275256.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1103463 1104014 . + . ID=gene-LP088_RS05895;Name=LP088_RS05895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05895;old_locus_tag=LP088_05860 NZ_CP087814.1 Protein Homology CDS 1103463 1104014 . + 0 ID=cds-WP_078275257.1;Parent=gene-LP088_RS05895;Dbxref=Genbank:WP_078275257.1;Name=WP_078275257.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021361.2;locus_tag=LP088_RS05895;product=DUF2059 domain-containing protein;protein_id=WP_078275257.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1104058 1104684 . - . ID=gene-LP088_RS05900;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=LP088_RS05900;old_locus_tag=LP088_05865 NZ_CP087814.1 Protein Homology CDS 1104058 1104684 . - 0 ID=cds-WP_078275274.1;Parent=gene-LP088_RS05900;Dbxref=Genbank:WP_078275274.1;Name=WP_078275274.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003658018.1;locus_tag=LP088_RS05900;product=Holliday junction branch migration protein RuvA;protein_id=WP_078275274.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1104749 1105786 . - . ID=gene-LP088_RS05905;Name=fba;gbkey=Gene;gene=fba;gene_biotype=protein_coding;locus_tag=LP088_RS05905;old_locus_tag=LP088_05870 NZ_CP087814.1 Protein Homology CDS 1104749 1105786 . - 0 ID=cds-WP_078275258.1;Parent=gene-LP088_RS05905;Dbxref=Genbank:WP_078275258.1;Name=WP_078275258.1;Note=catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle%2C glycolysis%2C and/or gluconeogenesis;Ontology_term=GO:0006096,GO:0004332;gbkey=CDS;gene=fba;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003658016.1;locus_tag=LP088_RS05905;product=fructose-bisphosphate aldolase class II;protein_id=WP_078275258.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1106069 1106956 . + . ID=gene-LP088_RS05910;Name=LP088_RS05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05910;old_locus_tag=LP088_05875 NZ_CP087814.1 Protein Homology CDS 1106069 1106956 . + 0 ID=cds-WP_078275259.1;Parent=gene-LP088_RS05910;Dbxref=Genbank:WP_078275259.1;Name=WP_078275259.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012707.2;locus_tag=LP088_RS05910;product=transporter substrate-binding domain-containing protein;protein_id=WP_078275259.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1106997 1107188 . - . ID=gene-LP088_RS05915;Name=LP088_RS05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05915;old_locus_tag=LP088_05880 NZ_CP087814.1 GeneMarkS-2+ CDS 1106997 1107188 . - 0 ID=cds-WP_078275260.1;Parent=gene-LP088_RS05915;Dbxref=Genbank:WP_078275260.1;Name=WP_078275260.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS05915;product=hypothetical protein;protein_id=WP_078275260.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1107212 1108378 . - . ID=gene-LP088_RS05920;Name=LP088_RS05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05920;old_locus_tag=LP088_05885 NZ_CP087814.1 Protein Homology CDS 1107212 1108378 . - 0 ID=cds-WP_078275261.1;Parent=gene-LP088_RS05920;Dbxref=Genbank:WP_078275261.1;Name=WP_078275261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010114104.1;locus_tag=LP088_RS05920;product=hypothetical protein;protein_id=WP_078275261.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1108578 1108919 . - . ID=gene-LP088_RS05925;Name=fdx;gbkey=Gene;gene=fdx;gene_biotype=protein_coding;locus_tag=LP088_RS05925;old_locus_tag=LP088_05890 NZ_CP087814.1 Protein Homology CDS 1108578 1108919 . - 0 ID=cds-WP_078275263.1;Parent=gene-LP088_RS05925;Dbxref=Genbank:WP_078275263.1;Name=WP_078275263.1;Ontology_term=GO:0016226;gbkey=CDS;gene=fdx;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019384153.1;locus_tag=LP088_RS05925;product=ISC system 2Fe-2S type ferredoxin;protein_id=WP_078275263.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1108975 1110846 . - . ID=gene-LP088_RS05930;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=LP088_RS05930;old_locus_tag=LP088_05895 NZ_CP087814.1 Protein Homology CDS 1108975 1110846 . - 0 ID=cds-WP_078275264.1;Parent=gene-LP088_RS05930;Dbxref=Genbank:WP_078275264.1;Name=WP_078275264.1;Ontology_term=GO:0006457,GO:0005515;gbkey=CDS;gene=hscA;go_function=protein binding|0005515||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003665733.1;locus_tag=LP088_RS05930;product=Fe-S protein assembly chaperone HscA;protein_id=WP_078275264.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1110983 1111525 . - . ID=gene-LP088_RS05935;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=LP088_RS05935;old_locus_tag=LP088_05900 NZ_CP087814.1 Protein Homology CDS 1110983 1111525 . - 0 ID=cds-WP_078275265.1;Parent=gene-LP088_RS05935;Dbxref=Genbank:WP_078275265.1;Name=WP_078275265.1;Ontology_term=GO:0006457,GO:0005515;gbkey=CDS;gene=hscB;go_function=protein binding|0005515||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: protein motif:HMM:TIGR00714.1;locus_tag=LP088_RS05935;product=Fe-S protein assembly co-chaperone HscB;protein_id=WP_078275265.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1111529 1111849 . - . ID=gene-LP088_RS05940;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=LP088_RS05940;old_locus_tag=LP088_05905 NZ_CP087814.1 Protein Homology CDS 1111529 1111849 . - 0 ID=cds-WP_078275266.1;Parent=gene-LP088_RS05940;Dbxref=Genbank:WP_078275266.1;Name=WP_078275266.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=iscA;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005178462.1;locus_tag=LP088_RS05940;product=iron-sulfur cluster assembly protein IscA;protein_id=WP_078275266.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1112013 1112399 . - . ID=gene-LP088_RS05945;Name=iscU;gbkey=Gene;gene=iscU;gene_biotype=protein_coding;locus_tag=LP088_RS05945;old_locus_tag=LP088_05910 NZ_CP087814.1 Protein Homology CDS 1112013 1112399 . - 0 ID=cds-WP_078275267.1;Parent=gene-LP088_RS05945;Dbxref=Genbank:WP_078275267.1;Name=WP_078275267.1;Ontology_term=GO:0016226,GO:0005198;gbkey=CDS;gene=iscU;go_function=structural molecule activity|0005198||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004976649.1;locus_tag=LP088_RS05945;product=Fe-S cluster assembly scaffold IscU;protein_id=WP_078275267.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1112445 1112930 . - . ID=gene-LP088_RS05950;Name=LP088_RS05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05950;old_locus_tag=LP088_05915 NZ_CP087814.1 GeneMarkS-2+ CDS 1112445 1112930 . - 0 ID=cds-WP_143821752.1;Parent=gene-LP088_RS05950;Dbxref=Genbank:WP_143821752.1;Name=WP_143821752.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS05950;product=hypothetical protein;protein_id=WP_143821752.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1113127 1113381 . - . ID=gene-LP088_RS05955;Name=LP088_RS05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05955;old_locus_tag=LP088_05920 NZ_CP087814.1 GeneMarkS-2+ CDS 1113127 1113381 . - 0 ID=cds-WP_112742200.1;Parent=gene-LP088_RS05955;Dbxref=Genbank:WP_112742200.1;Name=WP_112742200.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS05955;product=hypothetical protein;protein_id=WP_112742200.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1113448 1114203 . - . ID=gene-LP088_RS05960;Name=LP088_RS05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05960;old_locus_tag=LP088_05925 NZ_CP087814.1 Protein Homology CDS 1113448 1114203 . - 0 ID=cds-WP_078275270.1;Parent=gene-LP088_RS05960;Dbxref=Genbank:WP_078275270.1;Name=WP_078275270.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012707.2;locus_tag=LP088_RS05960;product=transporter substrate-binding domain-containing protein;protein_id=WP_078275270.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1114216 1115439 . - . ID=gene-LP088_RS05965;Name=LP088_RS05965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05965;old_locus_tag=LP088_05930 NZ_CP087814.1 Protein Homology CDS 1114216 1115439 . - 0 ID=cds-WP_078275271.1;Parent=gene-LP088_RS05965;Dbxref=Genbank:WP_078275271.1;Name=WP_078275271.1;Ontology_term=GO:0044571,GO:0030170,GO:0031071;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=[2Fe-2S] cluster assembly|0044571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003665735.1;locus_tag=LP088_RS05965;product=IscS subfamily cysteine desulfurase;protein_id=WP_078275271.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1115436 1115945 . - . ID=gene-LP088_RS05970;Name=LP088_RS05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05970;old_locus_tag=LP088_05935 NZ_CP087814.1 Protein Homology CDS 1115436 1115945 . - 0 ID=cds-WP_078275272.1;Parent=gene-LP088_RS05970;Dbxref=Genbank:WP_078275272.1;Name=WP_078275272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199379.1;locus_tag=LP088_RS05970;product=Rrf2 family transcriptional regulator;protein_id=WP_078275272.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1116412 1117113 . - . ID=gene-LP088_RS05975;Name=LP088_RS05975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05975;old_locus_tag=LP088_05940 NZ_CP087814.1 Protein Homology CDS 1116412 1117113 . - 0 ID=cds-WP_228157806.1;Parent=gene-LP088_RS05975;Dbxref=Genbank:WP_228157806.1;Name=WP_228157806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003660636.1;locus_tag=LP088_RS05975;product=hypothetical protein;protein_id=WP_228157806.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1117461 1117766 . + . ID=gene-LP088_RS05980;Name=LP088_RS05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05980;old_locus_tag=LP088_05945 NZ_CP087814.1 Protein Homology CDS 1117461 1117766 . + 0 ID=cds-WP_029102137.1;Parent=gene-LP088_RS05980;Dbxref=Genbank:WP_029102137.1;Name=WP_029102137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001043038.1;locus_tag=LP088_RS05980;product=HU family DNA-binding protein;protein_id=WP_029102137.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 1118056 1118418 . - . ID=gene-LP088_RS05985;Name=LP088_RS05985;end_range=1118418,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS05985;old_locus_tag=LP088_05950;partial=true;pseudo=true NZ_CP087814.1 Protein Homology CDS 1118056 1118418 . - 0 ID=cds-LP088_RS05985;Parent=gene-LP088_RS05985;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1118418,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004654033.1;locus_tag=LP088_RS05985;partial=true;product=septal ring lytic transglycosylase RlpA family protein;pseudo=true;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 1118964 1119525 . + . ID=gene-LP088_RS05990;Name=LP088_RS05990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS05990;old_locus_tag=LP088_05955;pseudo=true NZ_CP087814.1 Protein Homology CDS 1118964 1119525 . + 0 ID=cds-LP088_RS05990;Parent=gene-LP088_RS05990;Note=frameshifted;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011959554.1;locus_tag=LP088_RS05990;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_CP087814.1 RefSeq gene 1119881 1120594 . - . ID=gene-LP088_RS05995;Name=LP088_RS05995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS05995;old_locus_tag=LP088_05960 NZ_CP087814.1 Protein Homology CDS 1119881 1120594 . - 0 ID=cds-WP_112742201.1;Parent=gene-LP088_RS05995;Dbxref=Genbank:WP_112742201.1;Name=WP_112742201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003671220.1;locus_tag=LP088_RS05995;product=Smr/MutS family protein;protein_id=WP_112742201.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1120636 1121280 . - . ID=gene-LP088_RS06000;Name=LP088_RS06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06000;old_locus_tag=LP088_05965 NZ_CP087814.1 Protein Homology CDS 1120636 1121280 . - 0 ID=cds-WP_078274206.1;Parent=gene-LP088_RS06000;Dbxref=Genbank:WP_078274206.1;Name=WP_078274206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657804.1;locus_tag=LP088_RS06000;product=DedA family protein;protein_id=WP_078274206.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1121706 1122548 . - . ID=gene-LP088_RS06005;Name=LP088_RS06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06005;old_locus_tag=LP088_05970 NZ_CP087814.1 GeneMarkS-2+ CDS 1121706 1122548 . - 0 ID=cds-WP_078274207.1;Parent=gene-LP088_RS06005;Dbxref=Genbank:WP_078274207.1;Name=WP_078274207.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS06005;product=hypothetical protein;protein_id=WP_078274207.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1122835 1123581 . - . ID=gene-LP088_RS06010;Name=LP088_RS06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06010;old_locus_tag=LP088_05975 NZ_CP087814.1 Protein Homology CDS 1122835 1123581 . - 0 ID=cds-WP_264676257.1;Parent=gene-LP088_RS06010;Dbxref=Genbank:WP_264676257.1;Name=WP_264676257.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013088.2;locus_tag=LP088_RS06010;product=DMT family transporter;protein_id=WP_264676257.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1123754 1125139 . - . ID=gene-LP088_RS06015;Name=LP088_RS06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06015;old_locus_tag=LP088_05980 NZ_CP087814.1 Protein Homology CDS 1123754 1125139 . - 0 ID=cds-WP_264676258.1;Parent=gene-LP088_RS06015;Dbxref=Genbank:WP_264676258.1;Name=WP_264676258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009501162.1;locus_tag=LP088_RS06015;product=TolC family protein;protein_id=WP_264676258.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1125143 1127083 . - . ID=gene-LP088_RS06020;Name=LP088_RS06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06020;old_locus_tag=LP088_05985 NZ_CP087814.1 Protein Homology CDS 1125143 1127083 . - 0 ID=cds-WP_078274211.1;Parent=gene-LP088_RS06020;Dbxref=Genbank:WP_078274211.1;Name=WP_078274211.1;Ontology_term=GO:0005524,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005007418.1;locus_tag=LP088_RS06020;product=MacB family efflux pump subunit;protein_id=WP_078274211.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1127085 1128242 . - . ID=gene-LP088_RS06025;Name=LP088_RS06025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06025;old_locus_tag=LP088_05990 NZ_CP087814.1 Protein Homology CDS 1127085 1128242 . - 0 ID=cds-WP_264676259.1;Parent=gene-LP088_RS06025;Dbxref=Genbank:WP_264676259.1;Name=WP_264676259.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520413.1;locus_tag=LP088_RS06025;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_264676259.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1128535 1129050 . - . ID=gene-LP088_RS06030;Name=LP088_RS06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06030;old_locus_tag=LP088_05995 NZ_CP087814.1 Protein Homology CDS 1128535 1129050 . - 0 ID=cds-WP_078274212.1;Parent=gene-LP088_RS06030;Dbxref=Genbank:WP_078274212.1;Name=WP_078274212.1;Ontology_term=GO:0009116,GO:0003999;gbkey=CDS;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019672991.1;locus_tag=LP088_RS06030;product=adenine phosphoribosyltransferase;protein_id=WP_078274212.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1129315 1129662 . - . ID=gene-LP088_RS06035;Name=LP088_RS06035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06035;old_locus_tag=LP088_06000 NZ_CP087814.1 Protein Homology CDS 1129315 1129662 . - 0 ID=cds-WP_112742204.1;Parent=gene-LP088_RS06035;Dbxref=Genbank:WP_112742204.1;Name=WP_112742204.1;Ontology_term=GO:0035438;gbkey=CDS;go_function=cyclic-di-GMP binding|0035438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280584.1;locus_tag=LP088_RS06035;product=PilZ domain-containing protein;protein_id=WP_112742204.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1129769 1130839 . - . ID=gene-LP088_RS06040;Name=LP088_RS06040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06040;old_locus_tag=LP088_06005 NZ_CP087814.1 Protein Homology CDS 1129769 1130839 . - 0 ID=cds-WP_264676260.1;Parent=gene-LP088_RS06040;Dbxref=Genbank:WP_264676260.1;Name=WP_264676260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003673171.1;locus_tag=LP088_RS06040;product=outer membrane protein assembly factor BamD;protein_id=WP_264676260.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1130978 1132027 . + . ID=gene-LP088_RS06045;Name=LP088_RS06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06045;old_locus_tag=LP088_06010 NZ_CP087814.1 Protein Homology CDS 1130978 1132027 . + 0 ID=cds-WP_264676261.1;Parent=gene-LP088_RS06045;Dbxref=Genbank:WP_264676261.1;Name=WP_264676261.1;Ontology_term=GO:0001522,GO:0009451,GO:0009982;gbkey=CDS;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003659905.1;locus_tag=LP088_RS06045;product=RluA family pseudouridine synthase;protein_id=WP_264676261.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1132146 1132943 . + . ID=gene-LP088_RS06050;Name=LP088_RS06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06050;old_locus_tag=LP088_06015 NZ_CP087814.1 Protein Homology CDS 1132146 1132943 . + 0 ID=cds-WP_264676262.1;Parent=gene-LP088_RS06050;Dbxref=Genbank:WP_264676262.1;Name=WP_264676262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003673888.1;locus_tag=LP088_RS06050;product=polyphenol oxidase family protein;protein_id=WP_264676262.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1132940 1133152 . + . ID=gene-LP088_RS06055;Name=LP088_RS06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06055 NZ_CP087814.1 Protein Homology CDS 1132940 1133152 . + 0 ID=cds-WP_264676263.1;Parent=gene-LP088_RS06055;Dbxref=Genbank:WP_264676263.1;Name=WP_264676263.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013246.2;locus_tag=LP088_RS06055;product=bestrophin family protein;protein_id=WP_264676263.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1133142 1133660 . + . ID=gene-LP088_RS06060;Name=LP088_RS06060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06060;old_locus_tag=LP088_06020 NZ_CP087814.1 Protein Homology CDS 1133142 1133660 . + 0 ID=cds-WP_264676264.1;Parent=gene-LP088_RS06060;Dbxref=Genbank:WP_264676264.1;Name=WP_264676264.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013246.2;locus_tag=LP088_RS06060;product=bestrophin family protein;protein_id=WP_264676264.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 1133823 1135056 . + . ID=gene-LP088_RS06065;Name=LP088_RS06065;end_range=1135056,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS06065;old_locus_tag=LP088_06025;partial=true;pseudo=true;start_range=.,1133823 NZ_CP087814.1 Protein Homology CDS 1133823 1135056 . + 0 ID=cds-LP088_RS06065;Parent=gene-LP088_RS06065;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1135056,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005248209.1;locus_tag=LP088_RS06065;partial=true;product=DUF853 domain-containing protein;pseudo=true;start_range=.,1133823;transl_table=11 NZ_CP087814.1 RefSeq gene 1135300 1135587 . + . ID=gene-LP088_RS06070;Name=LP088_RS06070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06070;old_locus_tag=LP088_06030 NZ_CP087814.1 Protein Homology CDS 1135300 1135587 . + 0 ID=cds-WP_078273310.1;Parent=gene-LP088_RS06070;Dbxref=Genbank:WP_078273310.1;Name=WP_078273310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003659360.1;locus_tag=LP088_RS06070;product=DUF1315 family protein;protein_id=WP_078273310.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1135669 1135833 . - . ID=gene-LP088_RS06075;Name=LP088_RS06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06075;old_locus_tag=LP088_06035 NZ_CP087814.1 GeneMarkS-2+ CDS 1135669 1135833 . - 0 ID=cds-WP_162860378.1;Parent=gene-LP088_RS06075;Dbxref=Genbank:WP_162860378.1;Name=WP_162860378.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS06075;product=hypothetical protein;protein_id=WP_162860378.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1135878 1136120 . + . ID=gene-LP088_RS06080;Name=LP088_RS06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06080;old_locus_tag=LP088_06040 NZ_CP087814.1 Protein Homology CDS 1135878 1136120 . + 0 ID=cds-WP_228157840.1;Parent=gene-LP088_RS06080;Dbxref=Genbank:WP_228157840.1;Name=WP_228157840.1;Ontology_term=GO:0008219;gbkey=CDS;go_process=cell death|0008219||IEA;inference=COORDINATES: protein motif:HMM:NF014643.2;locus_tag=LP088_RS06080;product=type II toxin-antitoxin system prevent-host-death family antitoxin;protein_id=WP_228157840.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1136110 1136367 . + . ID=gene-LP088_RS06085;Name=LP088_RS06085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06085;old_locus_tag=LP088_06045 NZ_CP087814.1 Protein Homology CDS 1136110 1136367 . + 0 ID=cds-WP_112742208.1;Parent=gene-LP088_RS06085;Dbxref=Genbank:WP_112742208.1;Name=WP_112742208.1;Ontology_term=GO:0008219;gbkey=CDS;go_process=cell death|0008219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016292806.1;locus_tag=LP088_RS06085;product=Txe/YoeB family addiction module toxin;protein_id=WP_112742208.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1136426 1136935 . + . ID=gene-LP088_RS06090;Name=LP088_RS06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06090;old_locus_tag=LP088_06050 NZ_CP087814.1 Protein Homology CDS 1136426 1136935 . + 0 ID=cds-WP_112742209.1;Parent=gene-LP088_RS06090;Dbxref=Genbank:WP_112742209.1;Name=WP_112742209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005178561.1;locus_tag=LP088_RS06090;product=peptidylprolyl isomerase;protein_id=WP_112742209.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1137001 1137804 . + . ID=gene-LP088_RS06095;Name=LP088_RS06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06095;old_locus_tag=LP088_06055 NZ_CP087814.1 Protein Homology CDS 1137001 1137804 . + 0 ID=cds-WP_078273307.1;Parent=gene-LP088_RS06095;Dbxref=Genbank:WP_078273307.1;Name=WP_078273307.1;Ontology_term=GO:0009245,GO:0016462;gbkey=CDS;go_function=pyrophosphatase activity|0016462||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199250.1;locus_tag=LP088_RS06095;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=WP_078273307.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1137900 1140422 . - . ID=gene-LP088_RS06100;Name=LP088_RS06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06100;old_locus_tag=LP088_06060 NZ_CP087814.1 GeneMarkS-2+ CDS 1137900 1140422 . - 0 ID=cds-WP_112742210.1;Parent=gene-LP088_RS06100;Dbxref=Genbank:WP_112742210.1;Name=WP_112742210.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS06100;product=alpha/beta hydrolase;protein_id=WP_112742210.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1140525 1141373 . - . ID=gene-LP088_RS06105;Name=LP088_RS06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06105;old_locus_tag=LP088_06065 NZ_CP087814.1 Protein Homology CDS 1140525 1141373 . - 0 ID=cds-WP_078273305.1;Parent=gene-LP088_RS06105;Dbxref=Genbank:WP_078273305.1;Name=WP_078273305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657443.1;locus_tag=LP088_RS06105;product=sel1 repeat family protein;protein_id=WP_078273305.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1141540 1143390 . - . ID=gene-LP088_RS06110;Name=LP088_RS06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06110;old_locus_tag=LP088_06070 NZ_CP087814.1 Protein Homology CDS 1141540 1143390 . - 0 ID=cds-WP_078273304.1;Parent=gene-LP088_RS06110;Dbxref=Genbank:WP_078273304.1;Name=WP_078273304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520630.1;locus_tag=LP088_RS06110;product=ABC transporter ATP-binding protein/permease;protein_id=WP_078273304.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1143583 1144311 . - . ID=gene-LP088_RS06115;Name=LP088_RS06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06115;old_locus_tag=LP088_06075 NZ_CP087814.1 Protein Homology CDS 1143583 1144311 . - 0 ID=cds-WP_078273303.1;Parent=gene-LP088_RS06115;Dbxref=Genbank:WP_078273303.1;Name=WP_078273303.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007393665.1;locus_tag=LP088_RS06115;product=ATP-binding cassette domain-containing protein;protein_id=WP_078273303.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1144343 1144819 . - . ID=gene-LP088_RS06120;Name=LP088_RS06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06120;old_locus_tag=LP088_06080 NZ_CP087814.1 GeneMarkS-2+ CDS 1144343 1144819 . - 0 ID=cds-WP_264676266.1;Parent=gene-LP088_RS06120;Dbxref=Genbank:WP_264676266.1;Name=WP_264676266.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS06120;product=hypothetical protein;protein_id=WP_264676266.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1144909 1145946 . - . ID=gene-LP088_RS06125;Name=LP088_RS06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06125;old_locus_tag=LP088_06085 NZ_CP087814.1 Protein Homology CDS 1144909 1145946 . - 0 ID=cds-WP_078273301.1;Parent=gene-LP088_RS06125;Dbxref=Genbank:WP_078273301.1;Name=WP_078273301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011960685.1;locus_tag=LP088_RS06125;product=ABC transporter substrate-binding protein;protein_id=WP_078273301.1;transl_table=11 NZ_CP087814.1 cmsearch riboswitch 1146074 1146173 . - . ID=id-NZ_CP087814.1:1146074..1146173;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP087814.1 RefSeq gene 1146370 1147137 . - . ID=gene-LP088_RS06130;Name=LP088_RS06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06130;old_locus_tag=LP088_06090 NZ_CP087814.1 Protein Homology CDS 1146370 1147137 . - 0 ID=cds-WP_078273300.1;Parent=gene-LP088_RS06130;Dbxref=Genbank:WP_078273300.1;Name=WP_078273300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013108044.1;locus_tag=LP088_RS06130;product=ABC transporter permease;protein_id=WP_078273300.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1147173 1148579 . - . ID=gene-LP088_RS06135;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=LP088_RS06135;old_locus_tag=LP088_06095 NZ_CP087814.1 Protein Homology CDS 1147173 1148579 . - 0 ID=cds-WP_078273299.1;Parent=gene-LP088_RS06135;Dbxref=Genbank:WP_078273299.1;Name=WP_078273299.1;Ontology_term=GO:0006281,GO:0005524;gbkey=CDS;gene=radA;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513818.1;locus_tag=LP088_RS06135;product=DNA repair protein RadA;protein_id=WP_078273299.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1149217 1149831 . + . ID=gene-LP088_RS06140;Name=sodA;gbkey=Gene;gene=sodA;gene_biotype=protein_coding;locus_tag=LP088_RS06140;old_locus_tag=LP088_06100 NZ_CP087814.1 Protein Homology CDS 1149217 1149831 . + 0 ID=cds-WP_029102762.1;Parent=gene-LP088_RS06140;Dbxref=Genbank:WP_029102762.1;Name=WP_029102762.1;Ontology_term=GO:0006801,GO:0004784;gbkey=CDS;gene=sodA;go_function=superoxide dismutase activity|0004784||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003673711.1;locus_tag=LP088_RS06140;product=superoxide dismutase [Mn];protein_id=WP_029102762.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1150178 1150654 . - . ID=gene-LP088_RS06145;Name=LP088_RS06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06145;old_locus_tag=LP088_06105 NZ_CP087814.1 Protein Homology CDS 1150178 1150654 . - 0 ID=cds-WP_162860379.1;Parent=gene-LP088_RS06145;Dbxref=Genbank:WP_162860379.1;Name=WP_162860379.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013487.2;locus_tag=LP088_RS06145;product=cytochrome c;protein_id=WP_162860379.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 1150845 1151486 . - . ID=gene-LP088_RS06150;Name=hemF;end_range=1151486,.;gbkey=Gene;gene=hemF;gene_biotype=pseudogene;locus_tag=LP088_RS06150;old_locus_tag=LP088_06110;partial=true;pseudo=true NZ_CP087814.1 Protein Homology CDS 1150845 1151486 . - 0 ID=cds-LP088_RS06150;Parent=gene-LP088_RS06150;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006779,GO:0004109;end_range=1151486,.;gbkey=CDS;gene=hemF;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007394263.1;locus_tag=LP088_RS06150;partial=true;product=oxygen-dependent coproporphyrinogen oxidase;pseudo=true;transl_table=11 NZ_CP087814.1 RefSeq gene 1151828 1153138 . - . ID=gene-LP088_RS06155;Name=LP088_RS06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06155;old_locus_tag=LP088_06115 NZ_CP087814.1 Protein Homology CDS 1151828 1153138 . - 0 ID=cds-WP_078273296.1;Parent=gene-LP088_RS06155;Dbxref=Genbank:WP_078273296.1;Name=WP_078273296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519595.1;locus_tag=LP088_RS06155;product=trypsin-like peptidase domain-containing protein;protein_id=WP_078273296.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1153614 1154786 . - . ID=gene-LP088_RS06160;Name=LP088_RS06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06160;old_locus_tag=LP088_06120 NZ_CP087814.1 Protein Homology CDS 1153614 1154786 . - 0 ID=cds-WP_078273295.1;Parent=gene-LP088_RS06160;Dbxref=Genbank:WP_078273295.1;Name=WP_078273295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019837648.1;locus_tag=LP088_RS06160;product=aspartate aminotransferase family protein;protein_id=WP_078273295.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1154879 1155061 . - . ID=gene-LP088_RS06165;Name=LP088_RS06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06165;old_locus_tag=LP088_06125 NZ_CP087814.1 Protein Homology CDS 1154879 1155061 . - 0 ID=cds-WP_078273294.1;Parent=gene-LP088_RS06165;Dbxref=Genbank:WP_078273294.1;Name=WP_078273294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011960663.1;locus_tag=LP088_RS06165;product=DNA gyrase inhibitor YacG;protein_id=WP_078273294.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1155602 1157104 . + . ID=gene-LP088_RS06170;Name=LP088_RS06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06170;old_locus_tag=LP088_06130 NZ_CP087814.1 Protein Homology CDS 1155602 1157104 . + 0 ID=cds-WP_228157812.1;Parent=gene-LP088_RS06170;Dbxref=Genbank:WP_228157812.1;Name=WP_228157812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010197923.1;locus_tag=LP088_RS06170;product=DUF3360 family protein;protein_id=WP_228157812.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1157568 1159004 . - . ID=gene-LP088_RS06175;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=LP088_RS06175;old_locus_tag=LP088_06135 NZ_CP087814.1 Protein Homology CDS 1157568 1159004 . - 0 ID=cds-WP_112742214.1;Parent=gene-LP088_RS06175;Dbxref=Genbank:WP_112742214.1;Name=WP_112742214.1;Ontology_term=GO:0015887,GO:0015937,GO:0015498;gbkey=CDS;gene=panF;go_function=pantothenate:sodium symporter activity|0015498||IEA;go_process=pantothenate transmembrane transport|0015887||IEA,coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: protein motif:HMM:TIGR02119.1;locus_tag=LP088_RS06175;product=sodium/pantothenate symporter;protein_id=WP_112742214.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1159001 1159333 . - . ID=gene-LP088_RS06180;Name=LP088_RS06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06180;old_locus_tag=LP088_06140 NZ_CP087814.1 Protein Homology CDS 1159001 1159333 . - 0 ID=cds-WP_112742215.1;Parent=gene-LP088_RS06180;Dbxref=Genbank:WP_112742215.1;Name=WP_112742215.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017958.2;locus_tag=LP088_RS06180;product=YhdT family protein;protein_id=WP_112742215.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1159508 1159774 . - . ID=gene-LP088_RS06185;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=LP088_RS06185;old_locus_tag=LP088_06145 NZ_CP087814.1 Protein Homology CDS 1159508 1159774 . - 0 ID=cds-WP_078273291.1;Parent=gene-LP088_RS06185;Dbxref=Genbank:WP_078273291.1;Name=WP_078273291.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsT;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513993.1;locus_tag=LP088_RS06185;product=30S ribosomal protein S20;protein_id=WP_078273291.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1160099 1162792 . + . ID=gene-LP088_RS06190;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=LP088_RS06190;old_locus_tag=LP088_06150 NZ_CP087814.1 Protein Homology CDS 1160099 1162792 . + 0 ID=cds-WP_264676267.1;Parent=gene-LP088_RS06190;Dbxref=Genbank:WP_264676267.1;Name=WP_264676267.1;Ontology_term=GO:0006259,GO:0006265,GO:0003677,GO:0003916,GO:0003918,GO:0005524;gbkey=CDS;gene=gyrA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA metabolic process|0006259||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019674104.1;locus_tag=LP088_RS06190;product=DNA gyrase subunit A;protein_id=WP_264676267.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1162946 1163134 . + . ID=gene-LP088_RS06195;Name=LP088_RS06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06195 NZ_CP087814.1 Protein Homology CDS 1162946 1163134 . + 0 ID=cds-WP_264676268.1;Parent=gene-LP088_RS06195;Dbxref=Genbank:WP_264676268.1;Name=WP_264676268.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024098.2;locus_tag=LP088_RS06195;product=DUF3800 domain-containing protein;protein_id=WP_264676268.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1163148 1163600 . + . ID=gene-LP088_RS06200;Name=LP088_RS06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06200;old_locus_tag=LP088_06155 NZ_CP087814.1 Protein Homology CDS 1163148 1163600 . + 0 ID=cds-WP_264676269.1;Parent=gene-LP088_RS06200;Dbxref=Genbank:WP_264676269.1;Name=WP_264676269.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024098.2;locus_tag=LP088_RS06200;product=DUF3800 domain-containing protein;protein_id=WP_264676269.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1164282 1165259 . + . ID=gene-LP088_RS06205;Name=LP088_RS06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06205;old_locus_tag=LP088_06160 NZ_CP087814.1 Protein Homology CDS 1164282 1165259 . + 0 ID=cds-WP_115369854.1;Parent=gene-LP088_RS06205;Dbxref=Genbank:WP_115369854.1;Name=WP_115369854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657753.1;locus_tag=LP088_RS06205;product=DUF1852 domain-containing protein;protein_id=WP_115369854.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1165344 1166378 . + . ID=gene-LP088_RS06210;Name=LP088_RS06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06210;old_locus_tag=LP088_06165 NZ_CP087814.1 Protein Homology CDS 1165344 1166378 . + 0 ID=cds-WP_115369855.1;Parent=gene-LP088_RS06210;Dbxref=Genbank:WP_115369855.1;Name=WP_115369855.1;Ontology_term=GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657754.1;locus_tag=LP088_RS06210;product=methionine synthase;protein_id=WP_115369855.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1166459 1166965 . + . ID=gene-LP088_RS06215;Name=LP088_RS06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06215;old_locus_tag=LP088_06170 NZ_CP087814.1 Protein Homology CDS 1166459 1166965 . + 0 ID=cds-WP_078273286.1;Parent=gene-LP088_RS06215;Dbxref=Genbank:WP_078273286.1;Name=WP_078273286.1;Ontology_term=GO:0010181;gbkey=CDS;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005160147.1;locus_tag=LP088_RS06215;product=flavin reductase;protein_id=WP_078273286.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1167433 1168548 . + . ID=gene-LP088_RS06220;Name=LP088_RS06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06220;old_locus_tag=LP088_06175 NZ_CP087814.1 Protein Homology CDS 1167433 1168548 . + 0 ID=cds-WP_078273284.1;Parent=gene-LP088_RS06220;Dbxref=Genbank:WP_078273284.1;Name=WP_078273284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019673227.1;locus_tag=LP088_RS06220;product=peptidylprolyl isomerase;protein_id=WP_078273284.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1168558 1169844 . + . ID=gene-LP088_RS06225;Name=LP088_RS06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06225;old_locus_tag=LP088_06180 NZ_CP087814.1 Protein Homology CDS 1168558 1169844 . + 0 ID=cds-WP_078273283.1;Parent=gene-LP088_RS06225;Dbxref=Genbank:WP_078273283.1;Name=WP_078273283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519868.1;locus_tag=LP088_RS06225;product=molybdopterin molybdotransferase MoeA;protein_id=WP_078273283.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1169896 1170255 . - . ID=gene-LP088_RS06230;Name=LP088_RS06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06230;old_locus_tag=LP088_06185 NZ_CP087814.1 GeneMarkS-2+ CDS 1169896 1170255 . - 0 ID=cds-WP_078273282.1;Parent=gene-LP088_RS06230;Dbxref=Genbank:WP_078273282.1;Name=WP_078273282.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS06230;product=hypothetical protein;protein_id=WP_078273282.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1170721 1171725 . + . ID=gene-LP088_RS06235;Name=LP088_RS06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06235;old_locus_tag=LP088_06190 NZ_CP087814.1 Protein Homology CDS 1170721 1171725 . + 0 ID=cds-WP_264676331.1;Parent=gene-LP088_RS06235;Dbxref=Genbank:WP_264676331.1;Name=WP_264676331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519001.1;locus_tag=LP088_RS06235;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_264676331.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 1172044 1172166 . + . ID=gene-LP088_RS06240;Name=LP088_RS06240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS06240;old_locus_tag=LP088_06195;partial=true;pseudo=true;start_range=.,1172044 NZ_CP087814.1 Protein Homology CDS 1172044 1172166 . + 0 ID=cds-LP088_RS06240;Parent=gene-LP088_RS06240;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657690.1;locus_tag=LP088_RS06240;partial=true;product=molybdenum cofactor biosynthesis protein;pseudo=true;start_range=.,1172044;transl_table=11 NZ_CP087814.1 RefSeq gene 1172182 1172862 . + . ID=gene-LP088_RS06245;Name=LP088_RS06245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06245;old_locus_tag=LP088_06200 NZ_CP087814.1 Protein Homology CDS 1172182 1172862 . + 0 ID=cds-WP_078273317.1;Parent=gene-LP088_RS06245;Dbxref=Genbank:WP_078273317.1;Name=WP_078273317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519003.1;locus_tag=LP088_RS06245;product=NTP transferase domain-containing protein;protein_id=WP_078273317.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1172859 1173332 . + . ID=gene-LP088_RS06250;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=LP088_RS06250;old_locus_tag=LP088_06205 NZ_CP087814.1 Protein Homology CDS 1172859 1173332 . + 0 ID=cds-WP_078273277.1;Parent=gene-LP088_RS06250;Dbxref=Genbank:WP_078273277.1;Name=WP_078273277.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaC;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009767180.1;locus_tag=LP088_RS06250;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_078273277.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1173322 1173591 . + . ID=gene-LP088_RS06255;Name=LP088_RS06255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06255;old_locus_tag=LP088_06210 NZ_CP087814.1 Protein Homology CDS 1173322 1173591 . + 0 ID=cds-WP_078273276.1;Parent=gene-LP088_RS06255;Dbxref=Genbank:WP_078273276.1;Name=WP_078273276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519005.1;locus_tag=LP088_RS06255;product=MoaD/ThiS family protein;protein_id=WP_078273276.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1173593 1174081 . + . ID=gene-LP088_RS06260;Name=LP088_RS06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06260;old_locus_tag=LP088_06215 NZ_CP087814.1 Protein Homology CDS 1173593 1174081 . + 0 ID=cds-WP_078273275.1;Parent=gene-LP088_RS06260;Dbxref=Genbank:WP_078273275.1;Name=WP_078273275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519006.1;locus_tag=LP088_RS06260;product=molybdenum cofactor biosynthesis protein MoaE;protein_id=WP_078273275.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1174197 1175240 . + . ID=gene-LP088_RS06265;Name=LP088_RS06265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06265;old_locus_tag=LP088_06220 NZ_CP087814.1 Protein Homology CDS 1174197 1175240 . + 0 ID=cds-WP_078273274.1;Parent=gene-LP088_RS06265;Dbxref=Genbank:WP_078273274.1;Name=WP_078273274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011961025.1;locus_tag=LP088_RS06265;product=ribonuclease Z;protein_id=WP_078273274.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1175237 1176247 . + . ID=gene-LP088_RS06270;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=LP088_RS06270;old_locus_tag=LP088_06225 NZ_CP087814.1 Protein Homology CDS 1175237 1176247 . + 0 ID=cds-WP_078273273.1;Parent=gene-LP088_RS06270;Dbxref=Genbank:WP_078273273.1;Name=WP_078273273.1;Ontology_term=GO:0008033,GO:0003824,GO:0016491,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=catalytic activity|0003824||IEA,oxidoreductase activity|0016491||IEA,tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280572.1;locus_tag=LP088_RS06270;product=tRNA dihydrouridine synthase DusB;protein_id=WP_078273273.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 1176341 1178563 . + . ID=gene-LP088_RS06275;Name=clpA;end_range=1178563,.;gbkey=Gene;gene=clpA;gene_biotype=pseudogene;locus_tag=LP088_RS06275;old_locus_tag=LP088_06230;partial=true;pseudo=true NZ_CP087814.1 Protein Homology CDS 1176341 1178563 . + 0 ID=cds-LP088_RS06275;Parent=gene-LP088_RS06275;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006508,GO:0043335,GO:0004176,GO:0009368;end_range=1178563,.;gbkey=CDS;gene=clpA;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA;go_process=proteolysis|0006508||IEA,protein unfolding|0043335||IEA;inference=COORDINATES: protein motif:HMM:TIGR02639.1;locus_tag=LP088_RS06275;partial=true;product=ATP-dependent Clp protease ATP-binding subunit ClpA;pseudo=true;transl_table=11 NZ_CP087814.1 RefSeq gene 1178722 1179573 . + . ID=gene-LP088_RS06280;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=LP088_RS06280;old_locus_tag=LP088_06235 NZ_CP087814.1 Protein Homology CDS 1178722 1179573 . + 0 ID=cds-WP_112742219.1;Parent=gene-LP088_RS06280;Dbxref=Genbank:WP_112742219.1;Name=WP_112742219.1;gbkey=CDS;gene=folD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004462989.1;locus_tag=LP088_RS06280;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WP_112742219.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1180133 1181077 . - . ID=gene-LP088_RS06285;Name=LP088_RS06285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06285;old_locus_tag=LP088_06240 NZ_CP087814.1 Protein Homology CDS 1180133 1181077 . - 0 ID=cds-WP_112742220.1;Parent=gene-LP088_RS06285;Dbxref=Genbank:WP_112742220.1;Name=WP_112742220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019673829.1;locus_tag=LP088_RS06285;product=LysR substrate-binding domain-containing protein;protein_id=WP_112742220.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1181214 1181612 . - . ID=gene-LP088_RS06290;Name=LP088_RS06290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06290;old_locus_tag=LP088_06245 NZ_CP087814.1 Protein Homology CDS 1181214 1181612 . - 0 ID=cds-WP_115369864.1;Parent=gene-LP088_RS06290;Dbxref=Genbank:WP_115369864.1;Name=WP_115369864.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027249.2;locus_tag=LP088_RS06290;product=type II toxin-antitoxin system HicB family antitoxin;protein_id=WP_115369864.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1181910 1183430 . + . ID=gene-LP088_RS06295;Name=LP088_RS06295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06295;old_locus_tag=LP088_06250 NZ_CP087814.1 Protein Homology CDS 1181910 1183430 . + 0 ID=cds-WP_181879595.1;Parent=gene-LP088_RS06295;Dbxref=Genbank:WP_181879595.1;Name=WP_181879595.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003660130.1;locus_tag=LP088_RS06295;product=MFS transporter;protein_id=WP_181879595.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1183432 1184268 . + . ID=gene-LP088_RS06300;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=LP088_RS06300;old_locus_tag=LP088_06255 NZ_CP087814.1 Protein Homology CDS 1183432 1184268 . + 0 ID=cds-WP_112742222.1;Parent=gene-LP088_RS06300;Dbxref=Genbank:WP_112742222.1;Name=WP_112742222.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011960989.1;locus_tag=LP088_RS06300;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_112742222.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1184261 1185049 . + . ID=gene-LP088_RS06305;Name=LP088_RS06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06305;old_locus_tag=LP088_06260 NZ_CP087814.1 Protein Homology CDS 1184261 1185049 . + 0 ID=cds-WP_078273267.1;Parent=gene-LP088_RS06305;Dbxref=Genbank:WP_078273267.1;Name=WP_078273267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007393936.1;locus_tag=LP088_RS06305;product=HesA/MoeB/ThiF family protein;protein_id=WP_078273267.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1185076 1186389 . + . ID=gene-LP088_RS06310;Name=LP088_RS06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06310;old_locus_tag=LP088_06265 NZ_CP087814.1 Protein Homology CDS 1185076 1186389 . + 0 ID=cds-WP_078273266.1;Parent=gene-LP088_RS06310;Dbxref=Genbank:WP_078273266.1;Name=WP_078273266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019518573.1;locus_tag=LP088_RS06310;product=AarF/ABC1/UbiB kinase family protein;protein_id=WP_078273266.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1186515 1188080 . - . ID=gene-LP088_RS06315;Name=LP088_RS06315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06315;old_locus_tag=LP088_06270 NZ_CP087814.1 Protein Homology CDS 1186515 1188080 . - 0 ID=cds-WP_078273265.1;Parent=gene-LP088_RS06315;Dbxref=Genbank:WP_078273265.1;Name=WP_078273265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013108072.1;locus_tag=LP088_RS06315;product=carbon starvation protein A;protein_id=WP_078273265.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1188398 1189156 . + . ID=gene-LP088_RS06320;Name=LP088_RS06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06320;old_locus_tag=LP088_06275 NZ_CP087814.1 GeneMarkS-2+ CDS 1188398 1189156 . + 0 ID=cds-WP_112742224.1;Parent=gene-LP088_RS06320;Dbxref=Genbank:WP_112742224.1;Name=WP_112742224.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS06320;product=hypothetical protein;protein_id=WP_112742224.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1189178 1189492 . + . ID=gene-LP088_RS06325;Name=LP088_RS06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06325;old_locus_tag=LP088_06280 NZ_CP087814.1 Protein Homology CDS 1189178 1189492 . + 0 ID=cds-WP_029102797.1;Parent=gene-LP088_RS06325;Dbxref=Genbank:WP_029102797.1;Name=WP_029102797.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014655.2;locus_tag=LP088_RS06325;product=ATP-dependent Clp protease adaptor ClpS;protein_id=WP_029102797.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1189594 1190259 . + . ID=gene-LP088_RS06330;Name=LP088_RS06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06330;old_locus_tag=LP088_06285 NZ_CP087814.1 Protein Homology CDS 1189594 1190259 . + 0 ID=cds-WP_112742225.1;Parent=gene-LP088_RS06330;Dbxref=Genbank:WP_112742225.1;Name=WP_112742225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001167155.1;locus_tag=LP088_RS06330;product=SAM-dependent methyltransferase;protein_id=WP_112742225.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1190249 1191448 . + . ID=gene-LP088_RS06335;Name=LP088_RS06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06335;old_locus_tag=LP088_06290 NZ_CP087814.1 Protein Homology CDS 1190249 1191448 . + 0 ID=cds-WP_078273262.1;Parent=gene-LP088_RS06335;Dbxref=Genbank:WP_078273262.1;Name=WP_078273262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016542379.1;locus_tag=LP088_RS06335;product=TIGR03862 family flavoprotein;protein_id=WP_078273262.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1191475 1192128 . - . ID=gene-LP088_RS06340;Name=LP088_RS06340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06340;old_locus_tag=LP088_06295 NZ_CP087814.1 Protein Homology CDS 1191475 1192128 . - 0 ID=cds-WP_078273261.1;Parent=gene-LP088_RS06340;Dbxref=Genbank:WP_078273261.1;Name=WP_078273261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003660241.1;locus_tag=LP088_RS06340;product=hypothetical protein;protein_id=WP_078273261.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1192118 1192339 . - . ID=gene-LP088_RS06345;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=LP088_RS06345;old_locus_tag=LP088_06300 NZ_CP087814.1 Protein Homology CDS 1192118 1192339 . - 0 ID=cds-WP_029102801.1;Parent=gene-LP088_RS06345;Dbxref=Genbank:WP_029102801.1;Name=WP_029102801.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001284370.1;locus_tag=LP088_RS06345;product=translation initiation factor IF-1;protein_id=WP_029102801.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1192402 1193202 . - . ID=gene-LP088_RS06350;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=LP088_RS06350;old_locus_tag=LP088_06305 NZ_CP087814.1 Protein Homology CDS 1192402 1193202 . - 0 ID=cds-WP_078273260.1;Parent=gene-LP088_RS06350;Dbxref=Genbank:WP_078273260.1;Name=WP_078273260.1;Ontology_term=GO:0006400,GO:0009982;gbkey=CDS;gene=truA;go_function=pseudouridine synthase activity|0009982||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657458.1;locus_tag=LP088_RS06350;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_078273260.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1193215 1194186 . - . ID=gene-LP088_RS06355;Name=LP088_RS06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06355;old_locus_tag=LP088_06310 NZ_CP087814.1 Protein Homology CDS 1193215 1194186 . - 0 ID=cds-WP_264676271.1;Parent=gene-LP088_RS06355;Dbxref=Genbank:WP_264676271.1;Name=WP_264676271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657457.1;locus_tag=LP088_RS06355;product=asparaginase domain-containing protein;protein_id=WP_264676271.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1194290 1196263 . - . ID=gene-LP088_RS06360;Name=LP088_RS06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06360;old_locus_tag=LP088_06315 NZ_CP087814.1 Protein Homology CDS 1194290 1196263 . - 0 ID=cds-WP_112742226.1;Parent=gene-LP088_RS06360;Dbxref=Genbank:WP_112742226.1;Name=WP_112742226.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03504.1;locus_tag=LP088_RS06360;product=hypothetical protein;protein_id=WP_112742226.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1196322 1197779 . - . ID=gene-LP088_RS06365;Name=LP088_RS06365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06365;old_locus_tag=LP088_06320 NZ_CP087814.1 Protein Homology CDS 1196322 1197779 . - 0 ID=cds-WP_078273257.1;Parent=gene-LP088_RS06365;Dbxref=Genbank:WP_078273257.1;Name=WP_078273257.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03505.1;locus_tag=LP088_RS06365;product=hypothetical protein;protein_id=WP_078273257.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1198020 1199153 . - . ID=gene-LP088_RS06370;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=LP088_RS06370;old_locus_tag=LP088_06325 NZ_CP087814.1 Protein Homology CDS 1198020 1199153 . - 0 ID=cds-WP_264676272.1;Parent=gene-LP088_RS06370;Dbxref=Genbank:WP_264676272.1;Name=WP_264676272.1;Ontology_term=GO:0009089,GO:0004073;gbkey=CDS;gene=asd;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003673959.1;locus_tag=LP088_RS06370;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_264676272.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1200181 1201428 . + . ID=gene-LP088_RS06375;Name=LP088_RS06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06375;old_locus_tag=LP088_06330 NZ_CP087814.1 Protein Homology CDS 1200181 1201428 . + 0 ID=cds-WP_228157815.1;Parent=gene-LP088_RS06375;Dbxref=Genbank:WP_228157815.1;Name=WP_228157815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007395420.1;locus_tag=LP088_RS06375;product=mechanosensitive ion channel family protein;protein_id=WP_228157815.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1201659 1204481 . + . ID=gene-LP088_RS06380;Name=rlmKL;gbkey=Gene;gene=rlmKL;gene_biotype=protein_coding;locus_tag=LP088_RS06380;old_locus_tag=LP088_06335 NZ_CP087814.1 Protein Homology CDS 1201659 1204481 . + 0 ID=cds-WP_078273254.1;Parent=gene-LP088_RS06380;Dbxref=Genbank:WP_078273254.1;Name=WP_078273254.1;Ontology_term=GO:0031167,GO:0003723,GO:0008990;gbkey=CDS;gene=rlmKL;go_function=RNA binding|0003723||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657886.1;locus_tag=LP088_RS06380;product=bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL;protein_id=WP_078273254.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1204641 1205711 . + . ID=gene-LP088_RS06385;Name=ttcA;gbkey=Gene;gene=ttcA;gene_biotype=protein_coding;locus_tag=LP088_RS06385;old_locus_tag=LP088_06340 NZ_CP087814.1 Protein Homology CDS 1204641 1205711 . + 0 ID=cds-WP_078273253.1;Parent=gene-LP088_RS06385;Dbxref=Genbank:WP_078273253.1;Name=WP_078273253.1;Ontology_term=GO:0008033;gbkey=CDS;gene=ttcA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019673845.1;locus_tag=LP088_RS06385;product=tRNA 2-thiocytidine(32) synthetase TtcA;protein_id=WP_078273253.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1205829 1206071 . + . ID=gene-LP088_RS06390;Name=LP088_RS06390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06390;old_locus_tag=LP088_06345 NZ_CP087814.1 GeneMarkS-2+ CDS 1205829 1206071 . + 0 ID=cds-WP_162860380.1;Parent=gene-LP088_RS06390;Dbxref=Genbank:WP_162860380.1;Name=WP_162860380.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS06390;product=hypothetical protein;protein_id=WP_162860380.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1206171 1206701 . + . ID=gene-LP088_RS06395;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=LP088_RS06395;old_locus_tag=LP088_06350 NZ_CP087814.1 Protein Homology CDS 1206171 1206701 . + 0 ID=cds-WP_078273314.1;Parent=gene-LP088_RS06395;Dbxref=Genbank:WP_078273314.1;Name=WP_078273314.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004996689.1;locus_tag=LP088_RS06395;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_078273314.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1206788 1207429 . + . ID=gene-LP088_RS06400;Name=LP088_RS06400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06400;old_locus_tag=LP088_06355 NZ_CP087814.1 Protein Homology CDS 1206788 1207429 . + 0 ID=cds-WP_264676273.1;Parent=gene-LP088_RS06400;Dbxref=Genbank:WP_264676273.1;Name=WP_264676273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019672798.1;locus_tag=LP088_RS06400;product=trimeric intracellular cation channel family protein;protein_id=WP_264676273.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1207617 1209209 . - . ID=gene-LP088_RS06405;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=LP088_RS06405;old_locus_tag=LP088_06360 NZ_CP087814.1 Protein Homology CDS 1207617 1209209 . - 0 ID=cds-WP_078273251.1;Parent=gene-LP088_RS06405;Dbxref=Genbank:WP_078273251.1;Name=WP_078273251.1;Ontology_term=GO:0006164,GO:0006189,GO:0003824,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=catalytic activity|0003824||IEA,IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA,'de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011960845.1;locus_tag=LP088_RS06405;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_078273251.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1209314 1209571 . - . ID=gene-LP088_RS06410;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=LP088_RS06410;old_locus_tag=LP088_06365 NZ_CP087814.1 Protein Homology CDS 1209314 1209571 . - 0 ID=cds-WP_036387573.1;Parent=gene-LP088_RS06410;Dbxref=Genbank:WP_036387573.1;Name=WP_036387573.1;gbkey=CDS;gene=fis;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003659339.1;locus_tag=LP088_RS06410;product=DNA-binding transcriptional regulator Fis;protein_id=WP_036387573.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1210046 1211146 . - . ID=gene-LP088_RS06415;Name=LP088_RS06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06415;old_locus_tag=LP088_06370 NZ_CP087814.1 Protein Homology CDS 1210046 1211146 . - 0 ID=cds-WP_115369873.1;Parent=gene-LP088_RS06415;Dbxref=Genbank:WP_115369873.1;Name=WP_115369873.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023334.2;locus_tag=LP088_RS06415;product=zinc-ribbon domain-containing protein;protein_id=WP_115369873.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1211274 1212200 . - . ID=gene-LP088_RS06420;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=LP088_RS06420;old_locus_tag=LP088_06375 NZ_CP087814.1 Protein Homology CDS 1211274 1212200 . - 0 ID=cds-WP_078273250.1;Parent=gene-LP088_RS06420;Dbxref=Genbank:WP_078273250.1;Name=WP_078273250.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004900441.1;locus_tag=LP088_RS06420;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_078273250.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1212273 1213121 . - . ID=gene-LP088_RS06425;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=LP088_RS06425;old_locus_tag=LP088_06380 NZ_CP087814.1 Protein Homology CDS 1212273 1213121 . - 0 ID=cds-WP_078273249.1;Parent=gene-LP088_RS06425;Dbxref=Genbank:WP_078273249.1;Name=WP_078273249.1;Ontology_term=GO:0006535,GO:0009001;gbkey=CDS;gene=cysE;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198453.1;locus_tag=LP088_RS06425;product=serine O-acetyltransferase;protein_id=WP_078273249.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1213691 1214611 . - . ID=gene-LP088_RS06430;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=LP088_RS06430;old_locus_tag=LP088_06385 NZ_CP087814.1 Protein Homology CDS 1213691 1214611 . - 0 ID=cds-WP_078273248.1;Parent=gene-LP088_RS06430;Dbxref=Genbank:WP_078273248.1;Name=WP_078273248.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004936766.1;locus_tag=LP088_RS06430;product=ornithine carbamoyltransferase;protein_id=WP_078273248.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1214712 1215815 . - . ID=gene-LP088_RS06435;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=LP088_RS06435;old_locus_tag=LP088_06390 NZ_CP087814.1 Protein Homology CDS 1214712 1215815 . - 0 ID=cds-WP_078273247.1;Parent=gene-LP088_RS06435;Dbxref=Genbank:WP_078273247.1;Name=WP_078273247.1;Ontology_term=GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198428.1;locus_tag=LP088_RS06435;product=alanine racemase;protein_id=WP_078273247.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1215835 1217250 . - . ID=gene-LP088_RS06440;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=LP088_RS06440;old_locus_tag=LP088_06395 NZ_CP087814.1 Protein Homology CDS 1215835 1217250 . - 0 ID=cds-WP_078273246.1;Parent=gene-LP088_RS06440;Dbxref=Genbank:WP_078273246.1;Name=WP_078273246.1;Ontology_term=GO:0006260,GO:0003678;gbkey=CDS;gene=dnaB;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005178744.1;locus_tag=LP088_RS06440;product=replicative DNA helicase;protein_id=WP_078273246.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1217376 1218419 . + . ID=gene-LP088_RS06445;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=LP088_RS06445;old_locus_tag=LP088_06400 NZ_CP087814.1 Protein Homology CDS 1217376 1218419 . + 0 ID=cds-WP_078273245.1;Parent=gene-LP088_RS06445;Dbxref=Genbank:WP_078273245.1;Name=WP_078273245.1;Ontology_term=GO:0008615,GO:0050570;gbkey=CDS;gene=pdxA;go_function=4-hydroxythreonine-4-phosphate dehydrogenase activity|0050570||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019673073.1;locus_tag=LP088_RS06445;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=WP_078273245.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1218466 1219254 . - . ID=gene-LP088_RS06450;Name=LP088_RS06450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06450;old_locus_tag=LP088_06405 NZ_CP087814.1 GeneMarkS-2+ CDS 1218466 1219254 . - 0 ID=cds-WP_078273244.1;Parent=gene-LP088_RS06450;Dbxref=Genbank:WP_078273244.1;Name=WP_078273244.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS06450;product=hypothetical protein;protein_id=WP_078273244.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1219178 1219345 . - . ID=gene-LP088_RS06455;Name=LP088_RS06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06455;old_locus_tag=LP088_06410 NZ_CP087814.1 GeneMarkS-2+ CDS 1219178 1219345 . - 0 ID=cds-WP_158079590.1;Parent=gene-LP088_RS06455;Dbxref=Genbank:WP_158079590.1;Name=WP_158079590.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS06455;product=hypothetical protein;protein_id=WP_158079590.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1220049 1221332 . + . ID=gene-LP088_RS06460;Name=LP088_RS06460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06460;old_locus_tag=LP088_06415 NZ_CP087814.1 GeneMarkS-2+ CDS 1220049 1221332 . + 0 ID=cds-WP_162860382.1;Parent=gene-LP088_RS06460;Dbxref=Genbank:WP_162860382.1;Name=WP_162860382.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS06460;product=hypothetical protein;protein_id=WP_162860382.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1221742 1222035 . - . ID=gene-LP088_RS06465;Name=LP088_RS06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06465;old_locus_tag=LP088_06420 NZ_CP087814.1 GeneMarkS-2+ CDS 1221742 1222035 . - 0 ID=cds-WP_143821639.1;Parent=gene-LP088_RS06465;Dbxref=Genbank:WP_143821639.1;Name=WP_143821639.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS06465;product=hypothetical protein;protein_id=WP_143821639.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1222105 1222242 . - . ID=gene-LP088_RS06470;Name=LP088_RS06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06470;old_locus_tag=LP088_06425 NZ_CP087814.1 GeneMarkS-2+ CDS 1222105 1222242 . - 0 ID=cds-WP_158079589.1;Parent=gene-LP088_RS06470;Dbxref=Genbank:WP_158079589.1;Name=WP_158079589.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS06470;product=hypothetical protein;protein_id=WP_158079589.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1222423 1222791 . - . ID=gene-LP088_RS06475;Name=LP088_RS06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06475;old_locus_tag=LP088_06430 NZ_CP087814.1 GeneMarkS-2+ CDS 1222423 1222791 . - 0 ID=cds-WP_112742231.1;Parent=gene-LP088_RS06475;Dbxref=Genbank:WP_112742231.1;Name=WP_112742231.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS06475;product=hypothetical protein;protein_id=WP_112742231.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1223147 1224475 . - . ID=gene-LP088_RS06480;Name=LP088_RS06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06480;old_locus_tag=LP088_06435 NZ_CP087814.1 Protein Homology CDS 1223147 1224475 . - 0 ID=cds-WP_078273240.1;Parent=gene-LP088_RS06480;Dbxref=Genbank:WP_078273240.1;Name=WP_078273240.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011960830.1;locus_tag=LP088_RS06480;product=MFS transporter;protein_id=WP_078273240.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1224550 1227507 . + . ID=gene-LP088_RS06485;Name=LP088_RS06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06485;old_locus_tag=LP088_06440 NZ_CP087814.1 Protein Homology CDS 1224550 1227507 . + 0 ID=cds-WP_228157816.1;Parent=gene-LP088_RS06485;Dbxref=Genbank:WP_228157816.1;Name=WP_228157816.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003665448.1;locus_tag=LP088_RS06485;product=BamA/TamA family outer membrane protein;protein_id=WP_228157816.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1227801 1232882 . + . ID=gene-LP088_RS06490;Name=LP088_RS06490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06490;old_locus_tag=LP088_06445 NZ_CP087814.1 Protein Homology CDS 1227801 1232882 . + 0 ID=cds-WP_078273239.1;Parent=gene-LP088_RS06490;Dbxref=Genbank:WP_078273239.1;Name=WP_078273239.1;Ontology_term=GO:0009306,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: protein motif:HMM:NF016260.2;locus_tag=LP088_RS06490;product=translocation/assembly module TamB domain-containing protein;protein_id=WP_078273239.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1233025 1233186 . - . ID=gene-LP088_RS06495;Name=LP088_RS06495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06495;old_locus_tag=LP088_06450 NZ_CP087814.1 Protein Homology CDS 1233025 1233186 . - 0 ID=cds-WP_227514671.1;Parent=gene-LP088_RS06495;Dbxref=Genbank:WP_227514671.1;Name=WP_227514671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657438.1;locus_tag=LP088_RS06495;product=hemin uptake protein HemP;protein_id=WP_227514671.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1233411 1233854 . + . ID=gene-LP088_RS06500;Name=LP088_RS06500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06500;old_locus_tag=LP088_06455 NZ_CP087814.1 Protein Homology CDS 1233411 1233854 . + 0 ID=cds-WP_078273237.1;Parent=gene-LP088_RS06500;Dbxref=Genbank:WP_078273237.1;Name=WP_078273237.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF026165.2;locus_tag=LP088_RS06500;product=NUDIX domain-containing protein;protein_id=WP_078273237.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1233964 1235298 . + . ID=gene-LP088_RS06505;Name=LP088_RS06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06505;old_locus_tag=LP088_06460 NZ_CP087814.1 Protein Homology CDS 1233964 1235298 . + 0 ID=cds-WP_078273236.1;Parent=gene-LP088_RS06505;Dbxref=Genbank:WP_078273236.1;Name=WP_078273236.1;Ontology_term=GO:0006006,GO:0016620,GO:0050661,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NADP binding|0050661||IEA,NAD binding|0051287||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520490.1;locus_tag=LP088_RS06505;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_078273236.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1235432 1235728 . + . ID=gene-LP088_RS06510;Name=LP088_RS06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06510;old_locus_tag=LP088_06465 NZ_CP087814.1 Protein Homology CDS 1235432 1235728 . + 0 ID=cds-WP_078273235.1;Parent=gene-LP088_RS06510;Dbxref=Genbank:WP_078273235.1;Name=WP_078273235.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019844.2;locus_tag=LP088_RS06510;product=SH3 domain-containing protein;protein_id=WP_078273235.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1235959 1236034 . + . ID=gene-LP088_RS06515;Name=LP088_RS06515;gbkey=Gene;gene_biotype=tRNA;locus_tag=LP088_RS06515;old_locus_tag=LP088_06470 NZ_CP087814.1 tRNAscan-SE tRNA 1235959 1236034 . + . ID=rna-LP088_RS06515;Parent=gene-LP088_RS06515;anticodon=(pos:1235992..1235994);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS06515;product=tRNA-Gly NZ_CP087814.1 tRNAscan-SE exon 1235959 1236034 . + . ID=exon-LP088_RS06515-1;Parent=rna-LP088_RS06515;anticodon=(pos:1235992..1235994);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS06515;product=tRNA-Gly NZ_CP087814.1 RefSeq gene 1236174 1236341 . + . ID=gene-LP088_RS06520;Name=LP088_RS06520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06520;old_locus_tag=LP088_06475 NZ_CP087814.1 Protein Homology CDS 1236174 1236341 . + 0 ID=cds-WP_158079588.1;Parent=gene-LP088_RS06520;Dbxref=Genbank:WP_158079588.1;Name=WP_158079588.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013842.2;locus_tag=LP088_RS06520;product=IS630 transposase-related protein;protein_id=WP_158079588.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1236351 1237136 . - . ID=gene-LP088_RS06525;Name=LP088_RS06525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06525;old_locus_tag=LP088_06480 NZ_CP087814.1 Protein Homology CDS 1236351 1237136 . - 0 ID=cds-WP_078273232.1;Parent=gene-LP088_RS06525;Dbxref=Genbank:WP_078273232.1;Name=WP_078273232.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014691.2;locus_tag=LP088_RS06525;product=Fic family protein;protein_id=WP_078273232.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1237209 1237514 . - . ID=gene-LP088_RS06530;Name=LP088_RS06530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06530;old_locus_tag=LP088_06485 NZ_CP087814.1 GeneMarkS-2+ CDS 1237209 1237514 . - 0 ID=cds-WP_078273231.1;Parent=gene-LP088_RS06530;Dbxref=Genbank:WP_078273231.1;Name=WP_078273231.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS06530;product=hypothetical protein;protein_id=WP_078273231.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1238635 1239723 . - . ID=gene-LP088_RS06535;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=LP088_RS06535;old_locus_tag=LP088_06490 NZ_CP087814.1 Protein Homology CDS 1238635 1239723 . - 0 ID=cds-WP_264676275.1;Parent=gene-LP088_RS06535;Dbxref=Genbank:WP_264676275.1;Name=WP_264676275.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005054004.1;locus_tag=LP088_RS06535;product=chorismate synthase;protein_id=WP_264676275.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1239775 1240920 . - . ID=gene-LP088_RS06540;Name=LP088_RS06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06540;old_locus_tag=LP088_06495 NZ_CP087814.1 Protein Homology CDS 1239775 1240920 . - 0 ID=cds-WP_112742235.1;Parent=gene-LP088_RS06540;Dbxref=Genbank:WP_112742235.1;Name=WP_112742235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005016428.1;locus_tag=LP088_RS06540;product=glycosyltransferase family 4 protein;protein_id=WP_112742235.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1240929 1241717 . - . ID=gene-LP088_RS06545;Name=LP088_RS06545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06545;old_locus_tag=LP088_06500 NZ_CP087814.1 Protein Homology CDS 1240929 1241717 . - 0 ID=cds-WP_078274772.1;Parent=gene-LP088_RS06545;Dbxref=Genbank:WP_078274772.1;Name=WP_078274772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000987455.1;locus_tag=LP088_RS06545;product=glycosyltransferase;protein_id=WP_078274772.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1241733 1242503 . - . ID=gene-LP088_RS06550;Name=LP088_RS06550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06550;old_locus_tag=LP088_06505 NZ_CP087814.1 Protein Homology CDS 1241733 1242503 . - 0 ID=cds-WP_112742236.1;Parent=gene-LP088_RS06550;Dbxref=Genbank:WP_112742236.1;Name=WP_112742236.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013882.2;locus_tag=LP088_RS06550;product=glycosyltransferase family 25 protein;protein_id=WP_112742236.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1242663 1243649 . + . ID=gene-LP088_RS06555;Name=LP088_RS06555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06555;old_locus_tag=LP088_06510 NZ_CP087814.1 Protein Homology CDS 1242663 1243649 . + 0 ID=cds-WP_078274770.1;Parent=gene-LP088_RS06555;Dbxref=Genbank:WP_078274770.1;Name=WP_078274770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443378.1;locus_tag=LP088_RS06555;product=glycosyltransferase family 4 protein;protein_id=WP_078274770.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1243692 1244498 . - . ID=gene-LP088_RS06560;Name=LP088_RS06560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06560;old_locus_tag=LP088_06515 NZ_CP087814.1 Protein Homology CDS 1243692 1244498 . - 0 ID=cds-WP_078274769.1;Parent=gene-LP088_RS06560;Dbxref=Genbank:WP_078274769.1;Name=WP_078274769.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013882.2;locus_tag=LP088_RS06560;product=glycosyltransferase family 25 protein;protein_id=WP_078274769.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1244438 1246060 . - . ID=gene-LP088_RS06565;Name=LP088_RS06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06565;old_locus_tag=LP088_06520 NZ_CP087814.1 Protein Homology CDS 1244438 1246060 . - 0 ID=cds-WP_264676276.1;Parent=gene-LP088_RS06565;Dbxref=Genbank:WP_264676276.1;Name=WP_264676276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009501563.1;locus_tag=LP088_RS06565;product=glycosyltransferase family 2 protein;protein_id=WP_264676276.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1246057 1246803 . - . ID=gene-LP088_RS06570;Name=LP088_RS06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06570;old_locus_tag=LP088_06525 NZ_CP087814.1 Protein Homology CDS 1246057 1246803 . - 0 ID=cds-WP_078274768.1;Parent=gene-LP088_RS06570;Dbxref=Genbank:WP_078274768.1;Name=WP_078274768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003671199.1;locus_tag=LP088_RS06570;product=glycosyltransferase;protein_id=WP_078274768.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1246800 1247717 . - . ID=gene-LP088_RS06575;Name=LP088_RS06575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06575;old_locus_tag=LP088_06530 NZ_CP087814.1 Protein Homology CDS 1246800 1247717 . - 0 ID=cds-WP_112742237.1;Parent=gene-LP088_RS06575;Dbxref=Genbank:WP_112742237.1;Name=WP_112742237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443384.1;locus_tag=LP088_RS06575;product=lysophospholipid acyltransferase family protein;protein_id=WP_112742237.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1247735 1249534 . - . ID=gene-LP088_RS06580;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=LP088_RS06580;old_locus_tag=LP088_06535 NZ_CP087814.1 Protein Homology CDS 1247735 1249534 . - 0 ID=cds-WP_112742238.1;Parent=gene-LP088_RS06580;Dbxref=Genbank:WP_112742238.1;Name=WP_112742238.1;Ontology_term=GO:0006418,GO:0000166,GO:0004812,GO:0005524,GO:0016874;gbkey=CDS;gene=aspS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004463137.1;locus_tag=LP088_RS06580;product=aspartate--tRNA ligase;protein_id=WP_112742238.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1249829 1251691 . + . ID=gene-LP088_RS06585;Name=LP088_RS06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06585;old_locus_tag=LP088_06540 NZ_CP087814.1 Protein Homology CDS 1249829 1251691 . + 0 ID=cds-WP_078274765.1;Parent=gene-LP088_RS06585;Dbxref=Genbank:WP_078274765.1;Name=WP_078274765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003660185.1;locus_tag=LP088_RS06585;product=potassium/proton antiporter;protein_id=WP_078274765.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1251753 1252736 . + . ID=gene-LP088_RS06590;Name=sohB;gbkey=Gene;gene=sohB;gene_biotype=protein_coding;locus_tag=LP088_RS06590;old_locus_tag=LP088_06545 NZ_CP087814.1 Protein Homology CDS 1251753 1252736 . + 0 ID=cds-WP_078274764.1;Parent=gene-LP088_RS06590;Dbxref=Genbank:WP_078274764.1;Name=WP_078274764.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;gene=sohB;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019671985.1;locus_tag=LP088_RS06590;product=protease SohB;protein_id=WP_078274764.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1252880 1253746 . + . ID=gene-LP088_RS06595;Name=LP088_RS06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06595;old_locus_tag=LP088_06550 NZ_CP087814.1 Protein Homology CDS 1252880 1253746 . + 0 ID=cds-WP_078274763.1;Parent=gene-LP088_RS06595;Dbxref=Genbank:WP_078274763.1;Name=WP_078274763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019518899.1;locus_tag=LP088_RS06595;product=SDR family oxidoreductase;protein_id=WP_078274763.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1253827 1254330 . + . ID=gene-LP088_RS06600;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=LP088_RS06600;old_locus_tag=LP088_06555 NZ_CP087814.1 Protein Homology CDS 1253827 1254330 . + 0 ID=cds-WP_078274762.1;Parent=gene-LP088_RS06600;Dbxref=Genbank:WP_078274762.1;Name=WP_078274762.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: protein motif:HMM:NF001808.0;locus_tag=LP088_RS06600;product=thiol peroxidase;protein_id=WP_078274762.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 1254394 1255298 . - . ID=gene-LP088_RS06605;Name=LP088_RS06605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS06605;old_locus_tag=LP088_06560;pseudo=true NZ_CP087814.1 Protein Homology CDS 1254394 1255298 . - 0 ID=cds-LP088_RS06605;Parent=gene-LP088_RS06605;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_115305808.1;locus_tag=LP088_RS06605;product=IS630 family transposase;pseudo=true;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 1255255 1256151 . - . ID=gene-LP088_RS06610;Name=LP088_RS06610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS06610;old_locus_tag=LP088_06565;pseudo=true NZ_CP087814.1 Protein Homology CDS 1255255 1256151 . - 0 ID=cds-LP088_RS06610;Parent=gene-LP088_RS06610;Note=internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019421.2;locus_tag=LP088_RS06610;product=HipA domain-containing protein;pseudo=true;transl_table=11 NZ_CP087814.1 RefSeq gene 1256765 1257556 . - . ID=gene-LP088_RS06615;Name=LP088_RS06615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06615;old_locus_tag=LP088_06570 NZ_CP087814.1 Protein Homology CDS 1256765 1257556 . - 0 ID=cds-WP_162860384.1;Parent=gene-LP088_RS06615;Dbxref=Genbank:WP_162860384.1;Name=WP_162860384.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013700.2;locus_tag=LP088_RS06615;product=M23 family metallopeptidase;protein_id=WP_162860384.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1257582 1258448 . - . ID=gene-LP088_RS06620;Name=LP088_RS06620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06620;old_locus_tag=LP088_06575 NZ_CP087814.1 Protein Homology CDS 1257582 1258448 . - 0 ID=cds-WP_112742243.1;Parent=gene-LP088_RS06620;Dbxref=Genbank:WP_112742243.1;Name=WP_112742243.1;Ontology_term=GO:0008803;gbkey=CDS;go_function=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity|0008803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003658009.1;locus_tag=LP088_RS06620;product=symmetrical bis(5'-nucleosyl)-tetraphosphatase;protein_id=WP_112742243.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1258490 1259341 . - . ID=gene-LP088_RS06625;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=LP088_RS06625;old_locus_tag=LP088_06580 NZ_CP087814.1 Protein Homology CDS 1258490 1259341 . - 0 ID=cds-WP_112742244.1;Parent=gene-LP088_RS06625;Dbxref=Genbank:WP_112742244.1;Name=WP_112742244.1;Ontology_term=GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003659883.1;locus_tag=LP088_RS06625;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_112742244.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1259514 1259930 . - . ID=gene-LP088_RS06630;Name=LP088_RS06630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06630;old_locus_tag=LP088_06585 NZ_CP087814.1 Protein Homology CDS 1259514 1259930 . - 0 ID=cds-WP_112742245.1;Parent=gene-LP088_RS06630;Dbxref=Genbank:WP_112742245.1;Name=WP_112742245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657987.1;locus_tag=LP088_RS06630;product=DUF4377 domain-containing protein;protein_id=WP_112742245.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1260376 1261287 . + . ID=gene-LP088_RS06635;Name=LP088_RS06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06635;old_locus_tag=LP088_06590 NZ_CP087814.1 Protein Homology CDS 1260376 1261287 . + 0 ID=cds-WP_078275357.1-4;Parent=gene-LP088_RS06635;Dbxref=Genbank:WP_078275357.1;Name=WP_078275357.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004282326.1;locus_tag=LP088_RS06635;product=IS982 family transposase;protein_id=WP_078275357.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1261593 1262075 . + . ID=gene-LP088_RS06640;Name=LP088_RS06640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06640;old_locus_tag=LP088_06595 NZ_CP087814.1 Protein Homology CDS 1261593 1262075 . + 0 ID=cds-WP_112742246.1;Parent=gene-LP088_RS06640;Dbxref=Genbank:WP_112742246.1;Name=WP_112742246.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015298.2;locus_tag=LP088_RS06640;product=septal ring lytic transglycosylase RlpA family protein;protein_id=WP_112742246.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1262368 1262556 . - . ID=gene-LP088_RS06645;Name=LP088_RS06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06645;old_locus_tag=LP088_06600 NZ_CP087814.1 Protein Homology CDS 1262368 1262556 . - 0 ID=cds-WP_112742247.1;Parent=gene-LP088_RS06645;Dbxref=Genbank:WP_112742247.1;Name=WP_112742247.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017717.2;locus_tag=LP088_RS06645;product=AlpA family phage regulatory protein;protein_id=WP_112742247.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1262553 1262735 . - . ID=gene-LP088_RS06650;Name=LP088_RS06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06650;old_locus_tag=LP088_06605 NZ_CP087814.1 GeneMarkS-2+ CDS 1262553 1262735 . - 0 ID=cds-WP_112742248.1;Parent=gene-LP088_RS06650;Dbxref=Genbank:WP_112742248.1;Name=WP_112742248.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS06650;product=hypothetical protein;protein_id=WP_112742248.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1262738 1263082 . - . ID=gene-LP088_RS06655;Name=LP088_RS06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06655;old_locus_tag=LP088_06610 NZ_CP087814.1 Protein Homology CDS 1262738 1263082 . - 0 ID=cds-WP_112742067.1-2;Parent=gene-LP088_RS06655;Dbxref=Genbank:WP_112742067.1;Name=WP_112742067.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016343.2;locus_tag=LP088_RS06655;product=DUF551 domain-containing protein;protein_id=WP_112742067.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1263089 1263601 . - . ID=gene-LP088_RS06660;Name=LP088_RS06660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06660;old_locus_tag=LP088_06615 NZ_CP087814.1 Protein Homology CDS 1263089 1263601 . - 0 ID=cds-WP_264676180.1-2;Parent=gene-LP088_RS06660;Dbxref=Genbank:WP_264676180.1;Name=WP_264676180.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016343.2;locus_tag=LP088_RS06660;product=DUF551 domain-containing protein;protein_id=WP_264676180.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1263762 1264079 . - . ID=gene-LP088_RS06665;Name=LP088_RS06665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06665;old_locus_tag=LP088_06620 NZ_CP087814.1 GeneMarkS-2+ CDS 1263762 1264079 . - 0 ID=cds-WP_112742070.1-2;Parent=gene-LP088_RS06665;Dbxref=Genbank:WP_112742070.1;Name=WP_112742070.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS06665;product=hypothetical protein;protein_id=WP_112742070.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1264188 1264823 . - . ID=gene-LP088_RS06670;Name=LP088_RS06670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06670;old_locus_tag=LP088_06625 NZ_CP087814.1 Protein Homology CDS 1264188 1264823 . - 0 ID=cds-WP_112742071.1-2;Parent=gene-LP088_RS06670;Dbxref=Genbank:WP_112742071.1;Name=WP_112742071.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021128.2;locus_tag=LP088_RS06670;product=YqaJ viral recombinase family protein;protein_id=WP_112742071.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1264820 1265575 . - . ID=gene-LP088_RS06675;Name=LP088_RS06675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06675;old_locus_tag=LP088_06630 NZ_CP087814.1 Protein Homology CDS 1264820 1265575 . - 0 ID=cds-WP_264676181.1-2;Parent=gene-LP088_RS06675;Dbxref=Genbank:WP_264676181.1;Name=WP_264676181.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016302.2;locus_tag=LP088_RS06675;product=ERF family protein;protein_id=WP_264676181.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1265572 1265772 . - . ID=gene-LP088_RS06680;Name=LP088_RS06680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06680;old_locus_tag=LP088_06635 NZ_CP087814.1 GeneMarkS-2+ CDS 1265572 1265772 . - 0 ID=cds-WP_112742073.1-2;Parent=gene-LP088_RS06680;Dbxref=Genbank:WP_112742073.1;Name=WP_112742073.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS06680;product=hypothetical protein;protein_id=WP_112742073.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1265769 1266032 . - . ID=gene-LP088_RS06685;Name=LP088_RS06685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06685;old_locus_tag=LP088_06640 NZ_CP087814.1 GeneMarkS-2+ CDS 1265769 1266032 . - 0 ID=cds-WP_264676183.1-2;Parent=gene-LP088_RS06685;Dbxref=Genbank:WP_264676183.1;Name=WP_264676183.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS06685;product=hypothetical protein;protein_id=WP_264676183.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1266115 1266918 . - . ID=gene-LP088_RS06690;Name=LP088_RS06690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06690;old_locus_tag=LP088_06645 NZ_CP087814.1 Protein Homology CDS 1266115 1266918 . - 0 ID=cds-WP_264676697.1-2;Parent=gene-LP088_RS06690;Dbxref=Genbank:WP_264676697.1;Name=WP_264676697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000202272.1;locus_tag=LP088_RS06690;product=KilA-N domain-containing protein;protein_id=WP_264676697.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1267213 1267548 . - . ID=gene-LP088_RS06695;Name=LP088_RS06695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06695;old_locus_tag=LP088_06650 NZ_CP087814.1 GeneMarkS-2+ CDS 1267213 1267548 . - 0 ID=cds-WP_112742255.1-2;Parent=gene-LP088_RS06695;Dbxref=Genbank:WP_112742255.1;Name=WP_112742255.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS06695;product=hypothetical protein;protein_id=WP_112742255.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1268227 1268427 . + . ID=gene-LP088_RS06700;Name=LP088_RS06700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06700;old_locus_tag=LP088_06655 NZ_CP087814.1 GeneMarkS-2+ CDS 1268227 1268427 . + 0 ID=cds-WP_062498426.1-2;Parent=gene-LP088_RS06700;Dbxref=Genbank:WP_062498426.1;Name=WP_062498426.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS06700;product=hypothetical protein;protein_id=WP_062498426.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1268472 1269245 . - . ID=gene-LP088_RS06705;Name=LP088_RS06705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06705;old_locus_tag=LP088_06660 NZ_CP087814.1 Protein Homology CDS 1268472 1269245 . - 0 ID=cds-WP_112742256.1;Parent=gene-LP088_RS06705;Dbxref=Genbank:WP_112742256.1;Name=WP_112742256.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020436.2;locus_tag=LP088_RS06705;product=DUF1829 domain-containing protein;protein_id=WP_112742256.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1269364 1269591 . - . ID=gene-LP088_RS06710;Name=LP088_RS06710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06710;old_locus_tag=LP088_06665 NZ_CP087814.1 GeneMarkS-2+ CDS 1269364 1269591 . - 0 ID=cds-WP_112742257.1;Parent=gene-LP088_RS06710;Dbxref=Genbank:WP_112742257.1;Name=WP_112742257.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS06710;product=hypothetical protein;protein_id=WP_112742257.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1269610 1270170 . - . ID=gene-LP088_RS06715;Name=LP088_RS06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06715;old_locus_tag=LP088_06670 NZ_CP087814.1 GeneMarkS-2+ CDS 1269610 1270170 . - 0 ID=cds-WP_264676278.1;Parent=gene-LP088_RS06715;Dbxref=Genbank:WP_264676278.1;Name=WP_264676278.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS06715;product=hypothetical protein;protein_id=WP_264676278.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1270187 1271161 . - . ID=gene-LP088_RS06720;Name=LP088_RS06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06720;old_locus_tag=LP088_06675 NZ_CP087814.1 GeneMarkS-2+ CDS 1270187 1271161 . - 0 ID=cds-WP_264690423.1;Parent=gene-LP088_RS06720;Dbxref=Genbank:WP_264690423.1;Name=WP_264690423.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS06720;product=hypothetical protein;protein_id=WP_264690423.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1271235 1271903 . - . ID=gene-LP088_RS06725;Name=LP088_RS06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06725;old_locus_tag=LP088_06680 NZ_CP087814.1 Protein Homology CDS 1271235 1271903 . - 0 ID=cds-WP_112742260.1;Parent=gene-LP088_RS06725;Dbxref=Genbank:WP_112742260.1;Name=WP_112742260.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012920.2;locus_tag=LP088_RS06725;product=LexA family transcriptional regulator;protein_id=WP_112742260.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1272058 1272333 . + . ID=gene-LP088_RS06730;Name=LP088_RS06730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06730;old_locus_tag=LP088_06685 NZ_CP087814.1 Protein Homology CDS 1272058 1272333 . + 0 ID=cds-WP_112742261.1;Parent=gene-LP088_RS06730;Dbxref=Genbank:WP_112742261.1;Name=WP_112742261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005312740.1;locus_tag=LP088_RS06730;product=YdaS family helix-turn-helix protein;protein_id=WP_112742261.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1272401 1273084 . + . ID=gene-LP088_RS06735;Name=LP088_RS06735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06735;old_locus_tag=LP088_06690 NZ_CP087814.1 Protein Homology CDS 1272401 1273084 . + 0 ID=cds-WP_264676189.1;Parent=gene-LP088_RS06735;Dbxref=Genbank:WP_264676189.1;Name=WP_264676189.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021206.2;locus_tag=LP088_RS06735;product=Rha family transcriptional regulator;protein_id=WP_264676189.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1273081 1273968 . + . ID=gene-LP088_RS06740;Name=LP088_RS06740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06740;old_locus_tag=LP088_06695 NZ_CP087814.1 Protein Homology CDS 1273081 1273968 . + 0 ID=cds-WP_264690424.1;Parent=gene-LP088_RS06740;Dbxref=Genbank:WP_264690424.1;Name=WP_264690424.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016381.2;locus_tag=LP088_RS06740;product=replication protein;protein_id=WP_264690424.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1273965 1274573 . + . ID=gene-LP088_RS06745;Name=LP088_RS06745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06745;old_locus_tag=LP088_06700 NZ_CP087814.1 GeneMarkS-2+ CDS 1273965 1274573 . + 0 ID=cds-WP_078273440.1-2;Parent=gene-LP088_RS06745;Dbxref=Genbank:WP_078273440.1;Name=WP_078273440.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS06745;product=hypothetical protein;protein_id=WP_078273440.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1274570 1274965 . + . ID=gene-LP088_RS06750;Name=LP088_RS06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06750;old_locus_tag=LP088_06705 NZ_CP087814.1 Protein Homology CDS 1274570 1274965 . + 0 ID=cds-WP_264676281.1;Parent=gene-LP088_RS06750;Dbxref=Genbank:WP_264676281.1;Name=WP_264676281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519914.1;locus_tag=LP088_RS06750;product=VRR-NUC domain-containing protein;protein_id=WP_264676281.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1274962 1275240 . + . ID=gene-LP088_RS06755;Name=LP088_RS06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06755;old_locus_tag=LP088_06710 NZ_CP087814.1 Protein Homology CDS 1274962 1275240 . + 0 ID=cds-WP_264676282.1;Parent=gene-LP088_RS06755;Dbxref=Genbank:WP_264676282.1;Name=WP_264676282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005003573.1;locus_tag=LP088_RS06755;product=hypothetical protein;protein_id=WP_264676282.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1275262 1275552 . + . ID=gene-LP088_RS06760;Name=LP088_RS06760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06760;old_locus_tag=LP088_06715 NZ_CP087814.1 GeneMarkS-2+ CDS 1275262 1275552 . + 0 ID=cds-WP_112742084.1-2;Parent=gene-LP088_RS06760;Dbxref=Genbank:WP_112742084.1;Name=WP_112742084.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS06760;product=hypothetical protein;protein_id=WP_112742084.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1275549 1276034 . + . ID=gene-LP088_RS06765;Name=LP088_RS06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06765;old_locus_tag=LP088_06720 NZ_CP087814.1 Protein Homology CDS 1275549 1276034 . + 0 ID=cds-WP_078273444.1-2;Parent=gene-LP088_RS06765;Dbxref=Genbank:WP_078273444.1;Name=WP_078273444.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017578.2;locus_tag=LP088_RS06765;product=recombination protein NinB;protein_id=WP_078273444.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1276171 1276326 . + . ID=gene-LP088_RS06770;Name=LP088_RS06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06770;old_locus_tag=LP088_06725 NZ_CP087814.1 Protein Homology CDS 1276171 1276326 . + 0 ID=cds-WP_264676283.1;Parent=gene-LP088_RS06770;Dbxref=Genbank:WP_264676283.1;Name=WP_264676283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003660082.1;locus_tag=LP088_RS06770;product=hypothetical protein;protein_id=WP_264676283.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1276323 1276544 . + . ID=gene-LP088_RS06775;Name=LP088_RS06775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06775;old_locus_tag=LP088_06730 NZ_CP087814.1 Protein Homology CDS 1276323 1276544 . + 0 ID=cds-WP_264676284.1;Parent=gene-LP088_RS06775;Dbxref=Genbank:WP_264676284.1;Name=WP_264676284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009510722.1;locus_tag=LP088_RS06775;product=DUF3310 domain-containing protein;protein_id=WP_264676284.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1276528 1276929 . + . ID=gene-LP088_RS06780;Name=LP088_RS06780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06780;old_locus_tag=LP088_06735 NZ_CP087814.1 Protein Homology CDS 1276528 1276929 . + 0 ID=cds-WP_264676285.1;Parent=gene-LP088_RS06780;Dbxref=Genbank:WP_264676285.1;Name=WP_264676285.1;Ontology_term=GO:0060567,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of termination of DNA-templated transcription|0060567||IEA;inference=COORDINATES: protein motif:HMM:NF018262.2;locus_tag=LP088_RS06780;product=antiterminator Q family protein;protein_id=WP_264676285.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1276940 1277353 . - . ID=gene-LP088_RS06785;Name=LP088_RS06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06785;old_locus_tag=LP088_06740 NZ_CP087814.1 Protein Homology CDS 1276940 1277353 . - 0 ID=cds-WP_264676286.1;Parent=gene-LP088_RS06785;Dbxref=Genbank:WP_264676286.1;Name=WP_264676286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009512310.1;locus_tag=LP088_RS06785;product=type II toxin-antitoxin system HicB family antitoxin;protein_id=WP_264676286.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1277415 1277597 . - . ID=gene-LP088_RS06790;Name=LP088_RS06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06790;old_locus_tag=LP088_06745 NZ_CP087814.1 Protein Homology CDS 1277415 1277597 . - 0 ID=cds-WP_264676287.1;Parent=gene-LP088_RS06790;Dbxref=Genbank:WP_264676287.1;Name=WP_264676287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004703746.1;locus_tag=LP088_RS06790;product=type II toxin-antitoxin system HicA family toxin;protein_id=WP_264676287.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1277997 1278701 . + . ID=gene-LP088_RS06795;Name=LP088_RS06795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06795;old_locus_tag=LP088_06750 NZ_CP087814.1 Protein Homology CDS 1277997 1278701 . + 0 ID=cds-WP_264676288.1;Parent=gene-LP088_RS06795;Dbxref=Genbank:WP_264676288.1;Name=WP_264676288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002046121.1;locus_tag=LP088_RS06795;product=BRO family protein;protein_id=WP_264676288.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1279128 1279328 . - . ID=gene-LP088_RS06800;Name=LP088_RS06800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06800;old_locus_tag=LP088_06755 NZ_CP087814.1 Protein Homology CDS 1279128 1279328 . - 0 ID=cds-WP_264676289.1;Parent=gene-LP088_RS06800;Dbxref=Genbank:WP_264676289.1;Name=WP_264676289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009507420.1;locus_tag=LP088_RS06800;product=helix-turn-helix domain-containing protein;protein_id=WP_264676289.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1279365 1279574 . - . ID=gene-LP088_RS06805;Name=LP088_RS06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06805;old_locus_tag=LP088_06760 NZ_CP087814.1 Protein Homology CDS 1279365 1279574 . - 0 ID=cds-WP_264676290.1;Parent=gene-LP088_RS06805;Dbxref=Genbank:WP_264676290.1;Name=WP_264676290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003662311.1;locus_tag=LP088_RS06805;product=hypothetical protein;protein_id=WP_264676290.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1279688 1280227 . + . ID=gene-LP088_RS06810;Name=LP088_RS06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06810;old_locus_tag=LP088_06765 NZ_CP087814.1 Protein Homology CDS 1279688 1280227 . + 0 ID=cds-WP_264676291.1;Parent=gene-LP088_RS06810;Dbxref=Genbank:WP_264676291.1;Name=WP_264676291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004904786.1;locus_tag=LP088_RS06810;product=terminase small subunit;protein_id=WP_264676291.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1280227 1281624 . + . ID=gene-LP088_RS06815;Name=terL;gbkey=Gene;gene=terL;gene_biotype=protein_coding;locus_tag=LP088_RS06815;old_locus_tag=LP088_06770 NZ_CP087814.1 Protein Homology CDS 1280227 1281624 . + 0 ID=cds-WP_264676292.1;Parent=gene-LP088_RS06815;Dbxref=Genbank:WP_264676292.1;Name=WP_264676292.1;gbkey=CDS;gene=terL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005195955.1;locus_tag=LP088_RS06815;product=phage terminase large subunit;protein_id=WP_264676292.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1281621 1283051 . + . ID=gene-LP088_RS06820;Name=LP088_RS06820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06820;old_locus_tag=LP088_06775 NZ_CP087814.1 Protein Homology CDS 1281621 1283051 . + 0 ID=cds-WP_115369756.1;Parent=gene-LP088_RS06820;Dbxref=Genbank:WP_115369756.1;Name=WP_115369756.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017850.2;locus_tag=LP088_RS06820;product=DUF935 family protein;protein_id=WP_115369756.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1283038 1283787 . + . ID=gene-LP088_RS06825;Name=LP088_RS06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06825;old_locus_tag=LP088_06780 NZ_CP087814.1 Protein Homology CDS 1283038 1283787 . + 0 ID=cds-WP_264676293.1;Parent=gene-LP088_RS06825;Dbxref=Genbank:WP_264676293.1;Name=WP_264676293.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01641.1;locus_tag=LP088_RS06825;product=phage head morphogenesis protein;protein_id=WP_264676293.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1283771 1284844 . + . ID=gene-LP088_RS06830;Name=LP088_RS06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06830;old_locus_tag=LP088_06785 NZ_CP087814.1 Protein Homology CDS 1283771 1284844 . + 0 ID=cds-WP_264676294.1;Parent=gene-LP088_RS06830;Dbxref=Genbank:WP_264676294.1;Name=WP_264676294.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013506.2;locus_tag=LP088_RS06830;product=S49 family peptidase;protein_id=WP_264676294.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1284853 1285221 . + . ID=gene-LP088_RS06835;Name=LP088_RS06835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06835;old_locus_tag=LP088_06790 NZ_CP087814.1 GeneMarkS-2+ CDS 1284853 1285221 . + 0 ID=cds-WP_264676295.1;Parent=gene-LP088_RS06835;Dbxref=Genbank:WP_264676295.1;Name=WP_264676295.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS06835;product=hypothetical protein;protein_id=WP_264676295.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1285232 1286302 . + . ID=gene-LP088_RS06840;Name=LP088_RS06840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06840;old_locus_tag=LP088_06795 NZ_CP087814.1 Protein Homology CDS 1285232 1286302 . + 0 ID=cds-WP_264676296.1;Parent=gene-LP088_RS06840;Dbxref=Genbank:WP_264676296.1;Name=WP_264676296.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015802.2;locus_tag=LP088_RS06840;product=major capsid protein;protein_id=WP_264676296.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1286349 1286588 . + . ID=gene-LP088_RS06845;Name=LP088_RS06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06845;old_locus_tag=LP088_06800 NZ_CP087814.1 GeneMarkS-2+ CDS 1286349 1286588 . + 0 ID=cds-WP_264676297.1;Parent=gene-LP088_RS06845;Dbxref=Genbank:WP_264676297.1;Name=WP_264676297.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS06845;product=hypothetical protein;protein_id=WP_264676297.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1286591 1287025 . + . ID=gene-LP088_RS06850;Name=LP088_RS06850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06850;old_locus_tag=LP088_06805 NZ_CP087814.1 Protein Homology CDS 1286591 1287025 . + 0 ID=cds-WP_264676298.1;Parent=gene-LP088_RS06850;Dbxref=Genbank:WP_264676298.1;Name=WP_264676298.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018704.2;locus_tag=LP088_RS06850;product=DUF1320 domain-containing protein;protein_id=WP_264676298.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1287022 1287465 . + . ID=gene-LP088_RS06855;Name=LP088_RS06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06855;old_locus_tag=LP088_06810 NZ_CP087814.1 Protein Homology CDS 1287022 1287465 . + 0 ID=cds-WP_264676299.1;Parent=gene-LP088_RS06855;Dbxref=Genbank:WP_264676299.1;Name=WP_264676299.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016927.2;locus_tag=LP088_RS06855;product=phage virion morphogenesis protein;protein_id=WP_264676299.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1287458 1287895 . + . ID=gene-LP088_RS06860;Name=LP088_RS06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06860;old_locus_tag=LP088_06815 NZ_CP087814.1 GeneMarkS-2+ CDS 1287458 1287895 . + 0 ID=cds-WP_264676300.1;Parent=gene-LP088_RS06860;Dbxref=Genbank:WP_264676300.1;Name=WP_264676300.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS06860;product=hypothetical protein;protein_id=WP_264676300.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1287921 1288646 . + . ID=gene-LP088_RS06865;Name=LP088_RS06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06865;old_locus_tag=LP088_06820 NZ_CP087814.1 GeneMarkS-2+ CDS 1287921 1288646 . + 0 ID=cds-WP_264676301.1;Parent=gene-LP088_RS06865;Dbxref=Genbank:WP_264676301.1;Name=WP_264676301.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS06865;product=hypothetical protein;protein_id=WP_264676301.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1288698 1289063 . + . ID=gene-LP088_RS06870;Name=LP088_RS06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06870;old_locus_tag=LP088_06825 NZ_CP087814.1 GeneMarkS-2+ CDS 1288698 1289063 . + 0 ID=cds-WP_264676302.1;Parent=gene-LP088_RS06870;Dbxref=Genbank:WP_264676302.1;Name=WP_264676302.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS06870;product=hypothetical protein;protein_id=WP_264676302.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1289060 1289248 . + . ID=gene-LP088_RS06875;Name=LP088_RS06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06875;old_locus_tag=LP088_06830 NZ_CP087814.1 GeneMarkS-2+ CDS 1289060 1289248 . + 0 ID=cds-WP_115369767.1;Parent=gene-LP088_RS06875;Dbxref=Genbank:WP_115369767.1;Name=WP_115369767.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS06875;product=hypothetical protein;protein_id=WP_115369767.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1289235 1289642 . + . ID=gene-LP088_RS06880;Name=LP088_RS06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06880;old_locus_tag=LP088_06835 NZ_CP087814.1 GeneMarkS-2+ CDS 1289235 1289642 . + 0 ID=cds-WP_115369768.1;Parent=gene-LP088_RS06880;Dbxref=Genbank:WP_115369768.1;Name=WP_115369768.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS06880;product=hypothetical protein;protein_id=WP_115369768.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1289642 1291564 . + . ID=gene-LP088_RS06885;Name=LP088_RS06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06885;old_locus_tag=LP088_06840 NZ_CP087814.1 GeneMarkS-2+ CDS 1289642 1291564 . + 0 ID=cds-WP_264676303.1;Parent=gene-LP088_RS06885;Dbxref=Genbank:WP_264676303.1;Name=WP_264676303.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS06885;product=hypothetical protein;protein_id=WP_264676303.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1291564 1292688 . + . ID=gene-LP088_RS06890;Name=LP088_RS06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06890;old_locus_tag=LP088_06845 NZ_CP087814.1 GeneMarkS-2+ CDS 1291564 1292688 . + 0 ID=cds-WP_264676304.1;Parent=gene-LP088_RS06890;Dbxref=Genbank:WP_264676304.1;Name=WP_264676304.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS06890;product=hypothetical protein;protein_id=WP_264676304.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1292669 1293058 . + . ID=gene-LP088_RS06895;Name=LP088_RS06895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06895;old_locus_tag=LP088_06850 NZ_CP087814.1 GeneMarkS-2+ CDS 1292669 1293058 . + 0 ID=cds-WP_264676305.1;Parent=gene-LP088_RS06895;Dbxref=Genbank:WP_264676305.1;Name=WP_264676305.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS06895;product=hypothetical protein;protein_id=WP_264676305.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1293068 1293442 . + . ID=gene-LP088_RS06900;Name=LP088_RS06900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06900;old_locus_tag=LP088_06855 NZ_CP087814.1 Protein Homology CDS 1293068 1293442 . + 0 ID=cds-WP_112742264.1;Parent=gene-LP088_RS06900;Dbxref=Genbank:WP_112742264.1;Name=WP_112742264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003671763.1;locus_tag=LP088_RS06900;product=hypothetical protein;protein_id=WP_112742264.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1293435 1293740 . + . ID=gene-LP088_RS06905;Name=LP088_RS06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06905;old_locus_tag=LP088_06860 NZ_CP087814.1 Protein Homology CDS 1293435 1293740 . + 0 ID=cds-WP_112742265.1;Parent=gene-LP088_RS06905;Dbxref=Genbank:WP_112742265.1;Name=WP_112742265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003668216.1;locus_tag=LP088_RS06905;product=hypothetical protein;protein_id=WP_112742265.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1293764 1294306 . + . ID=gene-LP088_RS06910;Name=LP088_RS06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06910;old_locus_tag=LP088_06865 NZ_CP087814.1 Protein Homology CDS 1293764 1294306 . + 0 ID=cds-WP_244893697.1-2;Parent=gene-LP088_RS06910;Dbxref=Genbank:WP_244893697.1;Name=WP_244893697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003668218.1;locus_tag=LP088_RS06910;product=D-Ala-D-Ala carboxypeptidase family metallohydrolase;protein_id=WP_244893697.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1294360 1295550 . - . ID=gene-LP088_RS06915;Name=LP088_RS06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06915;old_locus_tag=LP088_06870 NZ_CP087814.1 Protein Homology CDS 1294360 1295550 . - 0 ID=cds-WP_264676306.1;Parent=gene-LP088_RS06915;Dbxref=Genbank:WP_264676306.1;Name=WP_264676306.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012798.2;locus_tag=LP088_RS06915;product=integrase arm-type DNA-binding domain-containing protein;protein_id=WP_264676306.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1295700 1296137 . - . ID=gene-LP088_RS06920;Name=LP088_RS06920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06920;old_locus_tag=LP088_06875 NZ_CP087814.1 Protein Homology CDS 1295700 1296137 . - 0 ID=cds-WP_264676307.1;Parent=gene-LP088_RS06920;Dbxref=Genbank:WP_264676307.1;Name=WP_264676307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003659840.1;locus_tag=LP088_RS06920;product=HIT domain-containing protein;protein_id=WP_264676307.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1296369 1297658 . + . ID=gene-LP088_RS06925;Name=LP088_RS06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06925;old_locus_tag=LP088_06880 NZ_CP087814.1 Protein Homology CDS 1296369 1297658 . + 0 ID=cds-WP_264676308.1;Parent=gene-LP088_RS06925;Dbxref=Genbank:WP_264676308.1;Name=WP_264676308.1;Ontology_term=GO:0006164,GO:0004019,GO:0005525;gbkey=CDS;go_function=adenylosuccinate synthase activity|0004019||IEA,GTP binding|0005525||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004989707.1;locus_tag=LP088_RS06925;product=adenylosuccinate synthase;protein_id=WP_264676308.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1297860 1299515 . + . ID=gene-LP088_RS06930;Name=LP088_RS06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06930;old_locus_tag=LP088_06885 NZ_CP087814.1 Protein Homology CDS 1297860 1299515 . + 0 ID=cds-WP_264676309.1;Parent=gene-LP088_RS06930;Dbxref=Genbank:WP_264676309.1;Name=WP_264676309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007394726.1;locus_tag=LP088_RS06930;product=ABC transporter substrate-binding protein;protein_id=WP_264676309.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1299578 1301245 . + . ID=gene-LP088_RS06935;Name=LP088_RS06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06935;old_locus_tag=LP088_06890 NZ_CP087814.1 Protein Homology CDS 1299578 1301245 . + 0 ID=cds-WP_264676310.1;Parent=gene-LP088_RS06935;Dbxref=Genbank:WP_264676310.1;Name=WP_264676310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011959317.1;locus_tag=LP088_RS06935;product=ABC transporter substrate-binding protein;protein_id=WP_264676310.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1301301 1302242 . + . ID=gene-LP088_RS06940;Name=LP088_RS06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06940 NZ_CP087814.1 Protein Homology CDS 1301301 1302242 . + 0 ID=cds-WP_264690425.1;Parent=gene-LP088_RS06940;Dbxref=Genbank:WP_264690425.1;Name=WP_264690425.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012706.2;locus_tag=LP088_RS06940;product=peptide ABC transporter substrate-binding protein;protein_id=WP_264690425.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1302263 1302937 . + . ID=gene-LP088_RS06945;Name=LP088_RS06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06945 NZ_CP087814.1 Protein Homology CDS 1302263 1302937 . + 0 ID=cds-WP_264690426.1;Parent=gene-LP088_RS06945;Dbxref=Genbank:WP_264690426.1;Name=WP_264690426.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012706.2;locus_tag=LP088_RS06945;product=ABC transporter substrate-binding protein;protein_id=WP_264690426.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1303478 1304398 . + . ID=gene-LP088_RS06950;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=LP088_RS06950;old_locus_tag=LP088_06900 NZ_CP087814.1 Protein Homology CDS 1303478 1304398 . + 0 ID=cds-WP_078275003.1;Parent=gene-LP088_RS06950;Dbxref=Genbank:WP_078275003.1;Name=WP_078275003.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=oppB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007394724.1;locus_tag=LP088_RS06950;product=oligopeptide ABC transporter permease OppB;protein_id=WP_078275003.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1304410 1305306 . + . ID=gene-LP088_RS06955;Name=oppC;gbkey=Gene;gene=oppC;gene_biotype=protein_coding;locus_tag=LP088_RS06955;old_locus_tag=LP088_06905 NZ_CP087814.1 Protein Homology CDS 1304410 1305306 . + 0 ID=cds-WP_208624095.1;Parent=gene-LP088_RS06955;Dbxref=Genbank:WP_208624095.1;Name=WP_208624095.1;Ontology_term=GO:0055085;gbkey=CDS;gene=oppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010197600.1;locus_tag=LP088_RS06955;product=oligopeptide ABC transporter permease OppC;protein_id=WP_208624095.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1305308 1306906 . + . ID=gene-LP088_RS06960;Name=LP088_RS06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06960;old_locus_tag=LP088_06910 NZ_CP087814.1 Protein Homology CDS 1305308 1306906 . + 0 ID=cds-WP_264676312.1;Parent=gene-LP088_RS06960;Dbxref=Genbank:WP_264676312.1;Name=WP_264676312.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF008453.0;locus_tag=LP088_RS06960;product=ABC transporter ATP-binding protein;protein_id=WP_264676312.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1306976 1308202 . - . ID=gene-LP088_RS06965;Name=LP088_RS06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06965;old_locus_tag=LP088_06915 NZ_CP087814.1 Protein Homology CDS 1306976 1308202 . - 0 ID=cds-WP_078275017.1;Parent=gene-LP088_RS06965;Dbxref=Genbank:WP_078275017.1;Name=WP_078275017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013107876.1;locus_tag=LP088_RS06965;product=divalent metal cation transporter;protein_id=WP_078275017.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1308413 1309228 . + . ID=gene-LP088_RS06970;Name=xthA;gbkey=Gene;gene=xthA;gene_biotype=protein_coding;locus_tag=LP088_RS06970;old_locus_tag=LP088_06920 NZ_CP087814.1 Protein Homology CDS 1308413 1309228 . + 0 ID=cds-WP_078275000.1;Parent=gene-LP088_RS06970;Dbxref=Genbank:WP_078275000.1;Name=WP_078275000.1;Ontology_term=GO:0006281,GO:0003677,GO:0004519,GO:0008853;gbkey=CDS;gene=xthA;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,exodeoxyribonuclease III activity|0008853||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003658034.1;locus_tag=LP088_RS06970;product=exodeoxyribonuclease III;protein_id=WP_078275000.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1309533 1310159 . + . ID=gene-LP088_RS06975;Name=LP088_RS06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06975;old_locus_tag=LP088_06925 NZ_CP087814.1 Protein Homology CDS 1309533 1310159 . + 0 ID=cds-WP_245952324.1;Parent=gene-LP088_RS06975;Dbxref=Genbank:WP_245952324.1;Name=WP_245952324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013107896.1;locus_tag=LP088_RS06975;product=alpha/beta fold hydrolase;protein_id=WP_245952324.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1310163 1310717 . + . ID=gene-LP088_RS06980;Name=LP088_RS06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06980;old_locus_tag=LP088_06930 NZ_CP087814.1 GeneMarkS-2+ CDS 1310163 1310717 . + 0 ID=cds-WP_078274999.1;Parent=gene-LP088_RS06980;Dbxref=Genbank:WP_078274999.1;Name=WP_078274999.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS06980;product=hypothetical protein;protein_id=WP_078274999.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1310686 1311783 . + . ID=gene-LP088_RS06985;Name=zapE;gbkey=Gene;gene=zapE;gene_biotype=protein_coding;locus_tag=LP088_RS06985;old_locus_tag=LP088_06935 NZ_CP087814.1 Protein Homology CDS 1310686 1311783 . + 0 ID=cds-WP_264676313.1;Parent=gene-LP088_RS06985;Dbxref=Genbank:WP_264676313.1;Name=WP_264676313.1;Ontology_term=GO:0051301,GO:0005524,GO:0016887;gbkey=CDS;gene=zapE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004462871.1;locus_tag=LP088_RS06985;product=cell division protein ZapE;protein_id=WP_264676313.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1311992 1312564 . + . ID=gene-LP088_RS06990;Name=LP088_RS06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06990;old_locus_tag=LP088_06940 NZ_CP087814.1 Protein Homology CDS 1311992 1312564 . + 0 ID=cds-WP_078274997.1;Parent=gene-LP088_RS06990;Dbxref=Genbank:WP_078274997.1;Name=WP_078274997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003673087.1;locus_tag=LP088_RS06990;product=nitroreductase;protein_id=WP_078274997.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1312721 1314046 . + . ID=gene-LP088_RS06995;Name=LP088_RS06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS06995;old_locus_tag=LP088_06945 NZ_CP087814.1 Protein Homology CDS 1312721 1314046 . + 0 ID=cds-WP_078274996.1;Parent=gene-LP088_RS06995;Dbxref=Genbank:WP_078274996.1;Name=WP_078274996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003659674.1;locus_tag=LP088_RS06995;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_078274996.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1314165 1314287 . - . ID=gene-LP088_RS07000;Name=LP088_RS07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07000 NZ_CP087814.1 Protein Homology CDS 1314165 1314287 . - 0 ID=cds-WP_264676314.1;Parent=gene-LP088_RS07000;Dbxref=Genbank:WP_264676314.1;Name=WP_264676314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519441.1;locus_tag=LP088_RS07000;product=hypothetical protein;protein_id=WP_264676314.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1314359 1314856 . + . ID=gene-LP088_RS07005;Name=sixA;gbkey=Gene;gene=sixA;gene_biotype=protein_coding;locus_tag=LP088_RS07005;old_locus_tag=LP088_06950 NZ_CP087814.1 Protein Homology CDS 1314359 1314856 . + 0 ID=cds-WP_078274995.1;Parent=gene-LP088_RS07005;Dbxref=Genbank:WP_078274995.1;Name=WP_078274995.1;Ontology_term=GO:0000160,GO:0101006;gbkey=CDS;gene=sixA;go_function=protein histidine phosphatase activity|0101006||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003673088.1;locus_tag=LP088_RS07005;product=phosphohistidine phosphatase SixA;protein_id=WP_078274995.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 1315001 1316017 . + . ID=gene-LP088_RS07010;Name=LP088_RS07010;end_range=1316017,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS07010;old_locus_tag=LP088_06955;partial=true;pseudo=true NZ_CP087814.1 Protein Homology CDS 1315001 1316017 . + 0 ID=cds-LP088_RS07010;Parent=gene-LP088_RS07010;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006222,GO:0004152,GO:0016020;end_range=1316017,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=UMP biosynthetic process|0006222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019671926.1;locus_tag=LP088_RS07010;partial=true;product=quinone-dependent dihydroorotate dehydrogenase;pseudo=true;transl_table=11 NZ_CP087814.1 RefSeq gene 1316116 1316619 . + . ID=gene-LP088_RS07015;Name=LP088_RS07015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07015;old_locus_tag=LP088_06960 NZ_CP087814.1 Protein Homology CDS 1316116 1316619 . + 0 ID=cds-WP_029102893.1;Parent=gene-LP088_RS07015;Dbxref=Genbank:WP_029102893.1;Name=WP_029102893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198340.1;locus_tag=LP088_RS07015;product=CvpA family protein;protein_id=WP_029102893.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1316719 1318233 . + . ID=gene-LP088_RS07020;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=LP088_RS07020;old_locus_tag=LP088_06965 NZ_CP087814.1 Protein Homology CDS 1316719 1318233 . + 0 ID=cds-WP_078274994.1;Parent=gene-LP088_RS07020;Dbxref=Genbank:WP_078274994.1;Name=WP_078274994.1;Ontology_term=GO:0009152,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443308.1;locus_tag=LP088_RS07020;product=amidophosphoribosyltransferase;protein_id=WP_078274994.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1318493 1319095 . - . ID=gene-LP088_RS07025;Name=LP088_RS07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07025;old_locus_tag=LP088_06970 NZ_CP087814.1 GeneMarkS-2+ CDS 1318493 1319095 . - 0 ID=cds-WP_078275447.1-2;Parent=gene-LP088_RS07025;Dbxref=Genbank:WP_078275447.1;Name=WP_078275447.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS07025;product=hypothetical protein;protein_id=WP_078275447.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1319306 1321582 . - . ID=gene-LP088_RS07030;Name=nrdA;gbkey=Gene;gene=nrdA;gene_biotype=protein_coding;locus_tag=LP088_RS07030;old_locus_tag=LP088_06975 NZ_CP087814.1 Protein Homology CDS 1319306 1321582 . - 0 ID=cds-WP_264676315.1;Parent=gene-LP088_RS07030;Dbxref=Genbank:WP_264676315.1;Name=WP_264676315.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003669739.1;locus_tag=LP088_RS07030;product=ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_264676315.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1321983 1323497 . + . ID=gene-LP088_RS07035;Name=LP088_RS07035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07035;old_locus_tag=LP088_06980 NZ_CP087814.1 Protein Homology CDS 1321983 1323497 . + 0 ID=cds-WP_264676316.1;Parent=gene-LP088_RS07035;Dbxref=Genbank:WP_264676316.1;Name=WP_264676316.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025736.2;locus_tag=LP088_RS07035;product=phosphatase PAP2 family protein;protein_id=WP_264676316.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1323494 1324207 . + . ID=gene-LP088_RS07040;Name=LP088_RS07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07040;old_locus_tag=LP088_06985 NZ_CP087814.1 Protein Homology CDS 1323494 1324207 . + 0 ID=cds-WP_264676317.1;Parent=gene-LP088_RS07040;Dbxref=Genbank:WP_264676317.1;Name=WP_264676317.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013327.2;locus_tag=LP088_RS07040;product=phosphatidate cytidylyltransferase;protein_id=WP_264676317.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1324178 1324981 . - . ID=gene-LP088_RS07045;Name=LP088_RS07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07045;old_locus_tag=LP088_06990 NZ_CP087814.1 Protein Homology CDS 1324178 1324981 . - 0 ID=cds-WP_078274778.1;Parent=gene-LP088_RS07045;Dbxref=Genbank:WP_078274778.1;Name=WP_078274778.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012334.2;locus_tag=LP088_RS07045;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_078274778.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1325062 1325856 . - . ID=gene-LP088_RS07050;Name=LP088_RS07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07050;old_locus_tag=LP088_06995 NZ_CP087814.1 GeneMarkS-2+ CDS 1325062 1325856 . - 0 ID=cds-WP_078274779.1;Parent=gene-LP088_RS07050;Dbxref=Genbank:WP_078274779.1;Name=WP_078274779.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS07050;product=hypothetical protein;protein_id=WP_078274779.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1325873 1326028 . - . ID=gene-LP088_RS07055;Name=LP088_RS07055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07055;old_locus_tag=LP088_07000 NZ_CP087814.1 GeneMarkS-2+ CDS 1325873 1326028 . - 0 ID=cds-WP_158079686.1;Parent=gene-LP088_RS07055;Dbxref=Genbank:WP_158079686.1;Name=WP_158079686.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS07055;product=hypothetical protein;protein_id=WP_158079686.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1326112 1327914 . - . ID=gene-LP088_RS07060;Name=LP088_RS07060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07060;old_locus_tag=LP088_07005 NZ_CP087814.1 Protein Homology CDS 1326112 1327914 . - 0 ID=cds-WP_078274780.1;Parent=gene-LP088_RS07060;Dbxref=Genbank:WP_078274780.1;Name=WP_078274780.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023569.2;locus_tag=LP088_RS07060;product=bifunctional alpha/beta hydrolase/class I SAM-dependent methyltransferase;protein_id=WP_078274780.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1327950 1328561 . - . ID=gene-LP088_RS07065;Name=LP088_RS07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07065;old_locus_tag=LP088_07010 NZ_CP087814.1 Protein Homology CDS 1327950 1328561 . - 0 ID=cds-WP_264676318.1;Parent=gene-LP088_RS07065;Dbxref=Genbank:WP_264676318.1;Name=WP_264676318.1;Ontology_term=GO:0008654,GO:0016780,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: protein motif:HMM:NF013250.2;locus_tag=LP088_RS07065;product=CDP-alcohol phosphatidyltransferase family protein;protein_id=WP_264676318.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1328814 1329443 . - . ID=gene-LP088_RS07070;Name=LP088_RS07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07070;old_locus_tag=LP088_07015 NZ_CP087814.1 Protein Homology CDS 1328814 1329443 . - 0 ID=cds-WP_078274782.1;Parent=gene-LP088_RS07070;Dbxref=Genbank:WP_078274782.1;Name=WP_078274782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003659275.1;locus_tag=LP088_RS07070;product=DUF2057 domain-containing protein;protein_id=WP_078274782.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1329513 1330280 . - . ID=gene-LP088_RS07075;Name=LP088_RS07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07075;old_locus_tag=LP088_07020 NZ_CP087814.1 Protein Homology CDS 1329513 1330280 . - 0 ID=cds-WP_078274783.1;Parent=gene-LP088_RS07075;Dbxref=Genbank:WP_078274783.1;Name=WP_078274783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003659276.1;locus_tag=LP088_RS07075;product=DnaA/Hda family protein;protein_id=WP_078274783.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 1330388 1331882 . - . ID=gene-LP088_RS07080;Name=LP088_RS07080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS07080;old_locus_tag=LP088_07025;pseudo=true NZ_CP087814.1 Protein Homology CDS 1330388 1331882 . - 0 ID=cds-LP088_RS07080;Parent=gene-LP088_RS07080;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007116025.1;locus_tag=LP088_RS07080;product=SulP family inorganic anion transporter;pseudo=true;transl_table=11 NZ_CP087814.1 RefSeq gene 1332022 1333119 . - . ID=gene-LP088_RS07085;Name=LP088_RS07085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07085;old_locus_tag=LP088_07030 NZ_CP087814.1 Protein Homology CDS 1332022 1333119 . - 0 ID=cds-WP_264676319.1;Parent=gene-LP088_RS07085;Dbxref=Genbank:WP_264676319.1;Name=WP_264676319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514175.1;locus_tag=LP088_RS07085;product=AI-2E family transporter;protein_id=WP_264676319.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1333329 1333405 . - . ID=gene-LP088_RS07090;Name=LP088_RS07090;gbkey=Gene;gene_biotype=tRNA;locus_tag=LP088_RS07090;old_locus_tag=LP088_07035 NZ_CP087814.1 tRNAscan-SE tRNA 1333329 1333405 . - . ID=rna-LP088_RS07090;Parent=gene-LP088_RS07090;anticodon=(pos:complement(1333369..1333371));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS07090;product=tRNA-Asp NZ_CP087814.1 tRNAscan-SE exon 1333329 1333405 . - . ID=exon-LP088_RS07090-1;Parent=rna-LP088_RS07090;anticodon=(pos:complement(1333369..1333371));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS07090;product=tRNA-Asp NZ_CP087814.1 RefSeq gene 1333443 1333518 . - . ID=gene-LP088_RS07095;Name=LP088_RS07095;gbkey=Gene;gene_biotype=tRNA;locus_tag=LP088_RS07095;old_locus_tag=LP088_07040 NZ_CP087814.1 tRNAscan-SE tRNA 1333443 1333518 . - . ID=rna-LP088_RS07095;Parent=gene-LP088_RS07095;anticodon=(pos:complement(1333483..1333485));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS07095;product=tRNA-Val NZ_CP087814.1 tRNAscan-SE exon 1333443 1333518 . - . ID=exon-LP088_RS07095-1;Parent=rna-LP088_RS07095;anticodon=(pos:complement(1333483..1333485));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS07095;product=tRNA-Val NZ_CP087814.1 RefSeq gene 1333846 1334325 . - . ID=gene-LP088_RS07100;Name=LP088_RS07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07100;old_locus_tag=LP088_07045 NZ_CP087814.1 Protein Homology CDS 1333846 1334325 . - 0 ID=cds-WP_078274784.1;Parent=gene-LP088_RS07100;Dbxref=Genbank:WP_078274784.1;Name=WP_078274784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004927531.1;locus_tag=LP088_RS07100;product=glutathione peroxidase;protein_id=WP_078274784.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1334359 1334781 . - . ID=gene-LP088_RS07105;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=LP088_RS07105;old_locus_tag=LP088_07050 NZ_CP087814.1 Protein Homology CDS 1334359 1334781 . - 0 ID=cds-WP_078274785.1;Parent=gene-LP088_RS07105;Dbxref=Genbank:WP_078274785.1;Name=WP_078274785.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280004.1;locus_tag=LP088_RS07105;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_078274785.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1334920 1335144 . + . ID=gene-LP088_RS07110;Name=LP088_RS07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07110;old_locus_tag=LP088_07055 NZ_CP087814.1 GeneMarkS-2+ CDS 1334920 1335144 . + 0 ID=cds-WP_147287371.1;Parent=gene-LP088_RS07110;Dbxref=Genbank:WP_147287371.1;Name=WP_147287371.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS07110;product=hypothetical protein;protein_id=WP_147287371.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 1335232 1335468 . + . ID=gene-LP088_RS07115;Name=LP088_RS07115;end_range=1335468,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS07115;old_locus_tag=LP088_07060;partial=true;pseudo=true NZ_CP087814.1 Protein Homology CDS 1335232 1335468 . + 0 ID=cds-LP088_RS07115;Parent=gene-LP088_RS07115;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1335468,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024252.2;locus_tag=LP088_RS07115;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_CP087814.1 RefSeq gene 1335580 1336812 . + . ID=gene-LP088_RS07120;Name=LP088_RS07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07120;old_locus_tag=LP088_07065 NZ_CP087814.1 Protein Homology CDS 1335580 1336812 . + 0 ID=cds-WP_244893676.1;Parent=gene-LP088_RS07120;Dbxref=Genbank:WP_244893676.1;Name=WP_244893676.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009767509.1;locus_tag=LP088_RS07120;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_244893676.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1336881 1338152 . - . ID=gene-LP088_RS07125;Name=LP088_RS07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07125;old_locus_tag=LP088_07070 NZ_CP087814.1 Protein Homology CDS 1336881 1338152 . - 0 ID=cds-WP_245952322.1;Parent=gene-LP088_RS07125;Dbxref=Genbank:WP_245952322.1;Name=WP_245952322.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007393478.1;locus_tag=LP088_RS07125;product=divalent metal cation transporter;protein_id=WP_245952322.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1338501 1338953 . + . ID=gene-LP088_RS07130;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=LP088_RS07130;old_locus_tag=LP088_07075 NZ_CP087814.1 Protein Homology CDS 1338501 1338953 . + 0 ID=cds-WP_078274789.1;Parent=gene-LP088_RS07130;Dbxref=Genbank:WP_078274789.1;Name=WP_078274789.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: protein motif:HMM:TIGR00531.1;locus_tag=LP088_RS07130;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_078274789.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1338970 1340352 . + . ID=gene-LP088_RS07135;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=LP088_RS07135;old_locus_tag=LP088_07080 NZ_CP087814.1 Protein Homology CDS 1338970 1340352 . + 0 ID=cds-WP_264675858.1;Parent=gene-LP088_RS07135;Dbxref=Genbank:WP_264675858.1;Name=WP_264675858.1;Ontology_term=GO:0006633,GO:0003989,GO:0004075,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA,biotin carboxylase activity|0004075||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011961435.1;locus_tag=LP088_RS07135;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_264675858.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1340370 1341062 . + . ID=gene-LP088_RS07140;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=protein_coding;locus_tag=LP088_RS07140;old_locus_tag=LP088_07085 NZ_CP087814.1 Protein Homology CDS 1340370 1341062 . + 0 ID=cds-WP_078274791.1;Parent=gene-LP088_RS07140;Dbxref=Genbank:WP_078274791.1;Name=WP_078274791.1;gbkey=CDS;gene=pxpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280373.1;locus_tag=LP088_RS07140;product=5-oxoprolinase subunit PxpB;protein_id=WP_078274791.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1341072 1341998 . + . ID=gene-LP088_RS07145;Name=LP088_RS07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07145;old_locus_tag=LP088_07090 NZ_CP087814.1 Protein Homology CDS 1341072 1341998 . + 0 ID=cds-WP_112742275.1;Parent=gene-LP088_RS07145;Dbxref=Genbank:WP_112742275.1;Name=WP_112742275.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00724.1;locus_tag=LP088_RS07145;product=biotin-dependent carboxyltransferase family protein;protein_id=WP_112742275.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1342007 1342768 . + . ID=gene-LP088_RS07150;Name=pxpA;gbkey=Gene;gene=pxpA;gene_biotype=protein_coding;locus_tag=LP088_RS07150;old_locus_tag=LP088_07095 NZ_CP087814.1 Protein Homology CDS 1342007 1342768 . + 0 ID=cds-WP_112742276.1;Parent=gene-LP088_RS07150;Dbxref=Genbank:WP_112742276.1;Name=WP_112742276.1;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;gene=pxpA;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280371.1;locus_tag=LP088_RS07150;product=5-oxoprolinase subunit PxpA;protein_id=WP_112742276.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1342934 1344115 . + . ID=gene-LP088_RS07155;Name=LP088_RS07155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07155;old_locus_tag=LP088_07100 NZ_CP087814.1 Protein Homology CDS 1342934 1344115 . + 0 ID=cds-WP_112742277.1;Parent=gene-LP088_RS07155;Dbxref=Genbank:WP_112742277.1;Name=WP_112742277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011961439.1;locus_tag=LP088_RS07155;product=divalent metal cation transporter;protein_id=WP_112742277.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1344119 1344523 . + . ID=gene-LP088_RS07160;Name=LP088_RS07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07160;old_locus_tag=LP088_07105 NZ_CP087814.1 GeneMarkS-2+ CDS 1344119 1344523 . + 0 ID=cds-WP_112742278.1;Parent=gene-LP088_RS07160;Dbxref=Genbank:WP_112742278.1;Name=WP_112742278.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS07160;product=hypothetical protein;protein_id=WP_112742278.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1344646 1345026 . - . ID=gene-LP088_RS07165;Name=LP088_RS07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07165;old_locus_tag=LP088_07110 NZ_CP087814.1 GeneMarkS-2+ CDS 1344646 1345026 . - 0 ID=cds-WP_078274795.1;Parent=gene-LP088_RS07165;Dbxref=Genbank:WP_078274795.1;Name=WP_078274795.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS07165;product=hypothetical protein;protein_id=WP_078274795.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1345198 1345872 . + . ID=gene-LP088_RS07170;Name=LP088_RS07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07170;old_locus_tag=LP088_07115 NZ_CP087814.1 Protein Homology CDS 1345198 1345872 . + 0 ID=cds-WP_264675859.1;Parent=gene-LP088_RS07170;Dbxref=Genbank:WP_264675859.1;Name=WP_264675859.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012920.2;locus_tag=LP088_RS07170;product=hypothetical protein;protein_id=WP_264675859.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1346119 1347345 . - . ID=gene-LP088_RS07175;Name=hutI;gbkey=Gene;gene=hutI;gene_biotype=protein_coding;locus_tag=LP088_RS07175;old_locus_tag=LP088_07120 NZ_CP087814.1 Protein Homology CDS 1346119 1347345 . - 0 ID=cds-WP_112742287.1;Parent=gene-LP088_RS07175;Dbxref=Genbank:WP_112742287.1;Name=WP_112742287.1;Ontology_term=GO:0006548,GO:0050480;gbkey=CDS;gene=hutI;go_function=imidazolonepropionase activity|0050480||IEA;go_process=histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201042.1;locus_tag=LP088_RS07175;product=imidazolonepropionase;protein_id=WP_112742287.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1347533 1348540 . - . ID=gene-LP088_RS07180;Name=hutG;gbkey=Gene;gene=hutG;gene_biotype=protein_coding;locus_tag=LP088_RS07180;old_locus_tag=LP088_07125 NZ_CP087814.1 Protein Homology CDS 1347533 1348540 . - 0 ID=cds-WP_112742288.1;Parent=gene-LP088_RS07180;Dbxref=Genbank:WP_112742288.1;Name=WP_112742288.1;Ontology_term=GO:0019556,GO:0050415;gbkey=CDS;gene=hutG;go_function=formimidoylglutamase activity|0050415||IEA;go_process=histidine catabolic process to glutamate and formamide|0019556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514253.1;locus_tag=LP088_RS07180;product=formimidoylglutamase;protein_id=WP_112742288.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1348898 1350457 . - . ID=gene-LP088_RS07185;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=protein_coding;locus_tag=LP088_RS07185;old_locus_tag=LP088_07130 NZ_CP087814.1 Protein Homology CDS 1348898 1350457 . - 0 ID=cds-WP_078274876.1;Parent=gene-LP088_RS07185;Dbxref=Genbank:WP_078274876.1;Name=WP_078274876.1;Ontology_term=GO:0006548,GO:0004397;gbkey=CDS;gene=hutH;go_function=histidine ammonia-lyase activity|0004397||IEA;go_process=histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514252.1;locus_tag=LP088_RS07185;product=histidine ammonia-lyase;protein_id=WP_078274876.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1350641 1351738 . + . ID=gene-LP088_RS07190;Name=LP088_RS07190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07190;old_locus_tag=LP088_07135 NZ_CP087814.1 Protein Homology CDS 1350641 1351738 . + 0 ID=cds-WP_078274877.1;Parent=gene-LP088_RS07190;Dbxref=Genbank:WP_078274877.1;Name=WP_078274877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010115188.1;locus_tag=LP088_RS07190;product=AAA family ATPase;protein_id=WP_078274877.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1351815 1352960 . + . ID=gene-LP088_RS07195;Name=LP088_RS07195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07195 NZ_CP087814.1 Protein Homology CDS 1351815 1352960 . + 0 ID=cds-WP_112742289.1;Parent=gene-LP088_RS07195;Dbxref=Genbank:WP_112742289.1;Name=WP_112742289.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040143.1;locus_tag=LP088_RS07195;product=DUF5682 family protein;protein_id=WP_112742289.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1352963 1354354 . + . ID=gene-LP088_RS07200;Name=LP088_RS07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07200 NZ_CP087814.1 Protein Homology CDS 1352963 1354354 . + 0 ID=cds-WP_264676332.1;Parent=gene-LP088_RS07200;Dbxref=Genbank:WP_264676332.1;Name=WP_264676332.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040143.1;locus_tag=LP088_RS07200;product=DUF5682 family protein;protein_id=WP_264676332.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 1354441 1355584 . + . ID=gene-LP088_RS07205;Name=LP088_RS07205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS07205;old_locus_tag=LP088_07145;pseudo=true NZ_CP087814.1 Protein Homology CDS 1354441 1355584 . + 0 ID=cds-LP088_RS07205;Parent=gene-LP088_RS07205;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004955294.1;locus_tag=LP088_RS07205;product=VWA domain-containing protein;pseudo=true;transl_table=11 NZ_CP087814.1 RefSeq gene 1355613 1357718 . + . ID=gene-LP088_RS07210;Name=LP088_RS07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07210;old_locus_tag=LP088_07150 NZ_CP087814.1 Protein Homology CDS 1355613 1357718 . + 0 ID=cds-WP_078274880.1;Parent=gene-LP088_RS07210;Dbxref=Genbank:WP_078274880.1;Name=WP_078274880.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016330.2;locus_tag=LP088_RS07210;product=SWIM zinc finger domain-containing protein;protein_id=WP_078274880.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1357866 1361663 . + . ID=gene-LP088_RS07215;Name=LP088_RS07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07215;old_locus_tag=LP088_07155 NZ_CP087814.1 Protein Homology CDS 1357866 1361663 . + 0 ID=cds-WP_264690427.1;Parent=gene-LP088_RS07215;Dbxref=Genbank:WP_264690427.1;Name=WP_264690427.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024958.2;locus_tag=LP088_RS07215;product=DUF4132 domain-containing protein;protein_id=WP_264690427.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1361733 1363040 . - . ID=gene-LP088_RS07220;Name=LP088_RS07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07220;old_locus_tag=LP088_07160 NZ_CP087814.1 Protein Homology CDS 1361733 1363040 . - 0 ID=cds-WP_078274883.1;Parent=gene-LP088_RS07220;Dbxref=Genbank:WP_078274883.1;Name=WP_078274883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444103.1;locus_tag=LP088_RS07220;product=YjiH family protein;protein_id=WP_078274883.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1363332 1365038 . - . ID=gene-LP088_RS07225;Name=LP088_RS07225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07225;old_locus_tag=LP088_07165 NZ_CP087814.1 Protein Homology CDS 1363332 1365038 . - 0 ID=cds-WP_112742293.1;Parent=gene-LP088_RS07225;Dbxref=Genbank:WP_112742293.1;Name=WP_112742293.1;Ontology_term=GO:0016153;gbkey=CDS;go_function=urocanate hydratase activity|0016153||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003665283.1;locus_tag=LP088_RS07225;product=urocanate hydratase;protein_id=WP_112742293.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1365210 1365914 . + . ID=gene-LP088_RS07230;Name=LP088_RS07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07230;old_locus_tag=LP088_07170 NZ_CP087814.1 Protein Homology CDS 1365210 1365914 . + 0 ID=cds-WP_112742294.1;Parent=gene-LP088_RS07230;Dbxref=Genbank:WP_112742294.1;Name=WP_112742294.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007393843.1;locus_tag=LP088_RS07230;product=GntR family transcriptional regulator;protein_id=WP_112742294.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1366058 1370866 . - . ID=gene-LP088_RS07235;Name=LP088_RS07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07235;old_locus_tag=LP088_07175 NZ_CP087814.1 Protein Homology CDS 1366058 1370866 . - 0 ID=cds-WP_112742295.1;Parent=gene-LP088_RS07235;Dbxref=Genbank:WP_112742295.1;Name=WP_112742295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513731.1;locus_tag=LP088_RS07235;product=NAD-glutamate dehydrogenase;protein_id=WP_112742295.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 1371080 1371710 . - . ID=gene-LP088_RS07240;Name=LP088_RS07240;end_range=1371710,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS07240;old_locus_tag=LP088_07180;partial=true;pseudo=true NZ_CP087814.1 Protein Homology CDS 1371080 1371710 . - 0 ID=cds-LP088_RS07240;Parent=gene-LP088_RS07240;Note=programmed frameshift%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=1371710,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611661.1;locus_tag=LP088_RS07240;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_CP087814.1 RefSeq gene 1371898 1373610 . - . ID=gene-LP088_RS07245;Name=betA;gbkey=Gene;gene=betA;gene_biotype=protein_coding;locus_tag=LP088_RS07245;old_locus_tag=LP088_07185 NZ_CP087814.1 Protein Homology CDS 1371898 1373610 . - 0 ID=cds-WP_112742296.1;Parent=gene-LP088_RS07245;Dbxref=Genbank:WP_112742296.1;Name=WP_112742296.1;Ontology_term=GO:0019285,GO:0008812;gbkey=CDS;gene=betA;go_function=choline dehydrogenase activity|0008812||IEA;go_process=glycine betaine biosynthetic process from choline|0019285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519506.1;locus_tag=LP088_RS07245;product=choline dehydrogenase;protein_id=WP_112742296.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1373652 1375169 . - . ID=gene-LP088_RS07250;Name=betB;gbkey=Gene;gene=betB;gene_biotype=protein_coding;locus_tag=LP088_RS07250;old_locus_tag=LP088_07190 NZ_CP087814.1 Protein Homology CDS 1373652 1375169 . - 0 ID=cds-WP_112742297.1;Parent=gene-LP088_RS07250;Dbxref=Genbank:WP_112742297.1;Name=WP_112742297.1;Ontology_term=GO:0019285,GO:0008802,GO:0046872;gbkey=CDS;gene=betB;go_function=betaine-aldehyde dehydrogenase activity|0008802||IEA,metal ion binding|0046872||IEA;go_process=glycine betaine biosynthetic process from choline|0019285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019385130.1;locus_tag=LP088_RS07250;product=betaine-aldehyde dehydrogenase;protein_id=WP_112742297.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1375491 1377518 . + . ID=gene-LP088_RS07255;Name=betT;gbkey=Gene;gene=betT;gene_biotype=protein_coding;locus_tag=LP088_RS07255;old_locus_tag=LP088_07195 NZ_CP087814.1 Protein Homology CDS 1375491 1377518 . + 0 ID=cds-WP_078275386.1;Parent=gene-LP088_RS07255;Dbxref=Genbank:WP_078275386.1;Name=WP_078275386.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;gene=betT;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000131044.1;locus_tag=LP088_RS07255;product=choline BCCT transporter BetT;protein_id=WP_078275386.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1377737 1378492 . + . ID=gene-LP088_RS07260;Name=LP088_RS07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07260;old_locus_tag=LP088_07200 NZ_CP087814.1 Protein Homology CDS 1377737 1378492 . + 0 ID=cds-WP_078275387.1;Parent=gene-LP088_RS07260;Dbxref=Genbank:WP_078275387.1;Name=WP_078275387.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018352.2;locus_tag=LP088_RS07260;product=MipA/OmpV family protein;protein_id=WP_078275387.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1378632 1379105 . - . ID=gene-LP088_RS07265;Name=bfr;gbkey=Gene;gene=bfr;gene_biotype=protein_coding;locus_tag=LP088_RS07265;old_locus_tag=LP088_07205 NZ_CP087814.1 Protein Homology CDS 1378632 1379105 . - 0 ID=cds-WP_078275388.1;Parent=gene-LP088_RS07265;Dbxref=Genbank:WP_078275388.1;Name=WP_078275388.1;Ontology_term=GO:0006880,GO:0004322,GO:0008199;gbkey=CDS;gene=bfr;go_function=ferroxidase activity|0004322||IEA,ferric iron binding|0008199||IEA;go_process=intracellular sequestering of iron ion|0006880||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443555.1;locus_tag=LP088_RS07265;product=bacterioferritin;protein_id=WP_078275388.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1379194 1379688 . - . ID=gene-LP088_RS07270;Name=bfr;gbkey=Gene;gene=bfr;gene_biotype=protein_coding;locus_tag=LP088_RS07270;old_locus_tag=LP088_07210 NZ_CP087814.1 Protein Homology CDS 1379194 1379688 . - 0 ID=cds-WP_078275389.1;Parent=gene-LP088_RS07270;Dbxref=Genbank:WP_078275389.1;Name=WP_078275389.1;Ontology_term=GO:0006880,GO:0004322,GO:0008199;gbkey=CDS;gene=bfr;go_function=ferroxidase activity|0004322||IEA,ferric iron binding|0008199||IEA;go_process=intracellular sequestering of iron ion|0006880||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513715.1;locus_tag=LP088_RS07270;product=bacterioferritin;protein_id=WP_078275389.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1380106 1380300 . - . ID=gene-LP088_RS07275;Name=LP088_RS07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07275;old_locus_tag=LP088_07215 NZ_CP087814.1 Protein Homology CDS 1380106 1380300 . - 0 ID=cds-WP_062501173.1;Parent=gene-LP088_RS07275;Dbxref=Genbank:WP_062501173.1;Name=WP_062501173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198018.1;locus_tag=LP088_RS07275;product=(2Fe-2S)-binding protein;protein_id=WP_062501173.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1380612 1381544 . - . ID=gene-LP088_RS07280;Name=LP088_RS07280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07280;old_locus_tag=LP088_07220 NZ_CP087814.1 Protein Homology CDS 1380612 1381544 . - 0 ID=cds-WP_264675861.1;Parent=gene-LP088_RS07280;Dbxref=Genbank:WP_264675861.1;Name=WP_264675861.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003662319.1;locus_tag=LP088_RS07280;product=branched-chain amino acid transaminase;protein_id=WP_264675861.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1381661 1382908 . - . ID=gene-LP088_RS07285;Name=LP088_RS07285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07285;old_locus_tag=LP088_07225 NZ_CP087814.1 Protein Homology CDS 1381661 1382908 . - 0 ID=cds-WP_112742298.1;Parent=gene-LP088_RS07285;Dbxref=Genbank:WP_112742298.1;Name=WP_112742298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013107754.1;locus_tag=LP088_RS07285;product=serine hydrolase;protein_id=WP_112742298.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1383109 1383984 . - . ID=gene-LP088_RS07290;Name=LP088_RS07290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07290;old_locus_tag=LP088_07230 NZ_CP087814.1 Protein Homology CDS 1383109 1383984 . - 0 ID=cds-WP_112742299.1;Parent=gene-LP088_RS07290;Dbxref=Genbank:WP_112742299.1;Name=WP_112742299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003659100.1;locus_tag=LP088_RS07290;product=MaoC/PaaZ C-terminal domain-containing protein;protein_id=WP_112742299.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1384107 1385465 . - . ID=gene-LP088_RS07295;Name=LP088_RS07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07295;old_locus_tag=LP088_07235 NZ_CP087814.1 Protein Homology CDS 1384107 1385465 . - 0 ID=cds-WP_112742300.1;Parent=gene-LP088_RS07295;Dbxref=Genbank:WP_112742300.1;Name=WP_112742300.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005240885.1;locus_tag=LP088_RS07295;product=3-oxoacyl-ACP reductase;protein_id=WP_112742300.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1385801 1387084 . + . ID=gene-LP088_RS07300;Name=LP088_RS07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07300;old_locus_tag=LP088_07240 NZ_CP087814.1 Protein Homology CDS 1385801 1387084 . + 0 ID=cds-WP_078275394.1;Parent=gene-LP088_RS07300;Dbxref=Genbank:WP_078275394.1;Name=WP_078275394.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013107751.1;locus_tag=LP088_RS07300;product=acetyl-CoA C-acetyltransferase;protein_id=WP_078275394.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1387398 1388423 . + . ID=gene-LP088_RS07305;Name=LP088_RS07305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07305;old_locus_tag=LP088_07245 NZ_CP087814.1 Protein Homology CDS 1387398 1388423 . + 0 ID=cds-WP_112742301.1;Parent=gene-LP088_RS07305;Dbxref=Genbank:WP_112742301.1;Name=WP_112742301.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012706.2;locus_tag=LP088_RS07305;product=ABC transporter substrate-binding protein;protein_id=WP_112742301.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1388404 1388727 . + . ID=gene-LP088_RS07310;Name=LP088_RS07310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07310;old_locus_tag=LP088_07250 NZ_CP087814.1 GeneMarkS-2+ CDS 1388404 1388727 . + 0 ID=cds-WP_112742302.1;Parent=gene-LP088_RS07310;Dbxref=Genbank:WP_112742302.1;Name=WP_112742302.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS07310;product=hypothetical protein;protein_id=WP_112742302.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1388821 1389201 . + . ID=gene-LP088_RS07315;Name=LP088_RS07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07315;old_locus_tag=LP088_07255 NZ_CP087814.1 Protein Homology CDS 1388821 1389201 . + 0 ID=cds-WP_208624033.1;Parent=gene-LP088_RS07315;Dbxref=Genbank:WP_208624033.1;Name=WP_208624033.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040248.1;locus_tag=LP088_RS07315;product=ABC transporter permease;protein_id=WP_208624033.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1389176 1389937 . - . ID=gene-LP088_RS07320;Name=LP088_RS07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07320;old_locus_tag=LP088_07260 NZ_CP087814.1 Protein Homology CDS 1389176 1389937 . - 0 ID=cds-WP_208624034.1-3;Parent=gene-LP088_RS07320;Dbxref=Genbank:WP_208624034.1;Name=WP_208624034.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF012870.2;locus_tag=LP088_RS07320;product=DDE-type integrase/transposase/recombinase;protein_id=WP_208624034.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 1390022 1390652 . - . ID=gene-LP088_RS07325;Name=LP088_RS07325;end_range=1390652,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS07325;old_locus_tag=LP088_07265;partial=true;pseudo=true NZ_CP087814.1 Protein Homology CDS 1390022 1390652 . - 0 ID=cds-LP088_RS07325;Parent=gene-LP088_RS07325;Note=programmed frameshift%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=1390652,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611661.1;locus_tag=LP088_RS07325;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_CP087814.1 RefSeq gene 1390826 1392040 . - . ID=gene-LP088_RS07330;Name=argJ;gbkey=Gene;gene=argJ;gene_biotype=protein_coding;locus_tag=LP088_RS07330;old_locus_tag=LP088_07270 NZ_CP087814.1 Protein Homology CDS 1390826 1392040 . - 0 ID=cds-WP_264690428.1;Parent=gene-LP088_RS07330;Dbxref=Genbank:WP_264690428.1;Name=WP_264690428.1;Ontology_term=GO:0006526,GO:0004358;gbkey=CDS;gene=argJ;go_function=glutamate N-acetyltransferase activity|0004358||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017387487.1;locus_tag=LP088_RS07330;product=bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ;protein_id=WP_264690428.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1392449 1392814 . + . ID=gene-LP088_RS07335;Name=LP088_RS07335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07335;old_locus_tag=LP088_07275 NZ_CP087814.1 Protein Homology CDS 1392449 1392814 . + 0 ID=cds-WP_264675862.1;Parent=gene-LP088_RS07335;Dbxref=Genbank:WP_264675862.1;Name=WP_264675862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003669741.1;locus_tag=LP088_RS07335;product=hypothetical protein;protein_id=WP_264675862.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1392950 1395064 . - . ID=gene-LP088_RS07340;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=LP088_RS07340;old_locus_tag=LP088_07280 NZ_CP087814.1 Protein Homology CDS 1392950 1395064 . - 0 ID=cds-WP_112742304.1;Parent=gene-LP088_RS07340;Dbxref=Genbank:WP_112742304.1;Name=WP_112742304.1;Ontology_term=GO:0006281,GO:0006310,GO:0008854,GO:0009338;gbkey=CDS;gene=recD;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: protein motif:HMM:TIGR01447.1;locus_tag=LP088_RS07340;product=exodeoxyribonuclease V subunit alpha;protein_id=WP_112742304.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1395184 1399065 . - . ID=gene-LP088_RS07345;Name=LP088_RS07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07345;old_locus_tag=LP088_07285 NZ_CP087814.1 Protein Homology CDS 1395184 1399065 . - 0 ID=cds-WP_264675863.1;Parent=gene-LP088_RS07345;Dbxref=Genbank:WP_264675863.1;Name=WP_264675863.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012789.2;locus_tag=LP088_RS07345;product=UvrD-helicase domain-containing protein;protein_id=WP_264675863.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1399078 1403346 . - . ID=gene-LP088_RS07350;Name=LP088_RS07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07350;old_locus_tag=LP088_07290 NZ_CP087814.1 Protein Homology CDS 1399078 1403346 . - 0 ID=cds-WP_264675864.1;Parent=gene-LP088_RS07350;Dbxref=Genbank:WP_264675864.1;Name=WP_264675864.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016169.2;locus_tag=LP088_RS07350;product=exodeoxyribonuclease V subunit gamma;protein_id=WP_264675864.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1403760 1403924 . + . ID=gene-LP088_RS07355;Name=LP088_RS07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07355;old_locus_tag=LP088_07295 NZ_CP087814.1 GeneMarkS-2+ CDS 1403760 1403924 . + 0 ID=cds-WP_158079654.1;Parent=gene-LP088_RS07355;Dbxref=Genbank:WP_158079654.1;Name=WP_158079654.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS07355;product=hypothetical protein;protein_id=WP_158079654.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1404211 1408005 . + . ID=gene-LP088_RS07360;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=LP088_RS07360;old_locus_tag=LP088_07300 NZ_CP087814.1 Protein Homology CDS 1404211 1408005 . + 0 ID=cds-WP_078274223.1;Parent=gene-LP088_RS07360;Dbxref=Genbank:WP_078274223.1;Name=WP_078274223.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013108033.1;locus_tag=LP088_RS07360;product=DNA polymerase III subunit alpha;protein_id=WP_078274223.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1408028 1408828 . + . ID=gene-LP088_RS07365;Name=LP088_RS07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07365;old_locus_tag=LP088_07305 NZ_CP087814.1 Protein Homology CDS 1408028 1408828 . + 0 ID=cds-WP_078274224.1;Parent=gene-LP088_RS07365;Dbxref=Genbank:WP_078274224.1;Name=WP_078274224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003671209.1;locus_tag=LP088_RS07365;product=RNA methyltransferase;protein_id=WP_078274224.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1408947 1409696 . + . ID=gene-LP088_RS07370;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=LP088_RS07370;old_locus_tag=LP088_07310 NZ_CP087814.1 Protein Homology CDS 1408947 1409696 . + 0 ID=cds-WP_078274225.1;Parent=gene-LP088_RS07370;Dbxref=Genbank:WP_078274225.1;Name=WP_078274225.1;Ontology_term=GO:0015689,GO:0015412,GO:0030973,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=modA;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type molybdate transporter activity|0015412||IEA,molybdate ion binding|0030973||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657684.1;locus_tag=LP088_RS07370;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_078274225.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1409795 1410481 . + . ID=gene-LP088_RS07375;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=LP088_RS07375;old_locus_tag=LP088_07315 NZ_CP087814.1 Protein Homology CDS 1409795 1410481 . + 0 ID=cds-WP_078274231.1;Parent=gene-LP088_RS07375;Dbxref=Genbank:WP_078274231.1;Name=WP_078274231.1;Ontology_term=GO:0015689,GO:0015098,GO:0016020;gbkey=CDS;gene=modB;go_component=membrane|0016020||IEA;go_function=molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016145231.1;locus_tag=LP088_RS07375;product=molybdate ABC transporter permease subunit;protein_id=WP_078274231.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1410484 1411131 . + . ID=gene-LP088_RS07380;Name=LP088_RS07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07380;old_locus_tag=LP088_07320 NZ_CP087814.1 Protein Homology CDS 1410484 1411131 . + 0 ID=cds-WP_078274226.1;Parent=gene-LP088_RS07380;Dbxref=Genbank:WP_078274226.1;Name=WP_078274226.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003665323.1;locus_tag=LP088_RS07380;product=ATP-binding cassette domain-containing protein;protein_id=WP_078274226.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1411466 1412167 . - . ID=gene-LP088_RS07385;Name=LP088_RS07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07385;old_locus_tag=LP088_07325 NZ_CP087814.1 Protein Homology CDS 1411466 1412167 . - 0 ID=cds-WP_078275358.1-2;Parent=gene-LP088_RS07385;Dbxref=Genbank:WP_078275358.1;Name=WP_078275358.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015586042.1;locus_tag=LP088_RS07385;product=IS1 family transposase;protein_id=WP_078275358.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1412482 1413159 . - . ID=gene-LP088_RS07390;Name=LP088_RS07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07390;old_locus_tag=LP088_07330 NZ_CP087814.1 Protein Homology CDS 1412482 1413159 . - 0 ID=cds-WP_078274227.1;Parent=gene-LP088_RS07390;Dbxref=Genbank:WP_078274227.1;Name=WP_078274227.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014404.2;locus_tag=LP088_RS07390;product=TerD family protein;protein_id=WP_078274227.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1413176 1413403 . - . ID=gene-LP088_RS07395;Name=LP088_RS07395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07395;old_locus_tag=LP088_07335 NZ_CP087814.1 Protein Homology CDS 1413176 1413403 . - 0 ID=cds-WP_078274228.1;Parent=gene-LP088_RS07395;Dbxref=Genbank:WP_078274228.1;Name=WP_078274228.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009502120.1;locus_tag=LP088_RS07395;product=exodeoxyribonuclease VII small subunit;protein_id=WP_078274228.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1413818 1415272 . + . ID=gene-LP088_RS07400;Name=LP088_RS07400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07400;old_locus_tag=LP088_07340 NZ_CP087814.1 Protein Homology CDS 1413818 1415272 . + 0 ID=cds-WP_078274229.1;Parent=gene-LP088_RS07400;Dbxref=Genbank:WP_078274229.1;Name=WP_078274229.1;Ontology_term=GO:0006820,GO:0008509,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=anion transmembrane transporter activity|0008509||IEA;go_process=anion transport|0006820||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003660133.1;locus_tag=LP088_RS07400;product=DASS family sodium-coupled anion symporter;protein_id=WP_078274229.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1415452 1417290 . + . ID=gene-LP088_RS07405;Name=LP088_RS07405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07405;old_locus_tag=LP088_07345 NZ_CP087814.1 Protein Homology CDS 1415452 1417290 . + 0 ID=cds-WP_078274230.1;Parent=gene-LP088_RS07405;Dbxref=Genbank:WP_078274230.1;Name=WP_078274230.1;Ontology_term=GO:0006094,GO:0004611,GO:0005525,GO:0017076;gbkey=CDS;go_function=phosphoenolpyruvate carboxykinase activity|0004611||IEA,GTP binding|0005525||IEA,purine nucleotide binding|0017076||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004996379.1;locus_tag=LP088_RS07405;product=phosphoenolpyruvate carboxykinase (GTP);protein_id=WP_078274230.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 1417428 1418296 . + . ID=gene-LP088_RS07410;Name=LP088_RS07410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS07410;old_locus_tag=LP088_07350;pseudo=true NZ_CP087814.1 Protein Homology CDS 1417428 1418296 . + 0 ID=cds-LP088_RS07410;Parent=gene-LP088_RS07410;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_115305808.1;locus_tag=LP088_RS07410;product=IS630 family transposase;pseudo=true;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 1418531 1418650 . - . ID=gene-LP088_RS07415;Name=LP088_RS07415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS07415;old_locus_tag=LP088_07355;partial=true;pseudo=true;start_range=.,1418531 NZ_CP087814.1 Protein Homology CDS 1418531 1418650 . - 0 ID=cds-LP088_RS07415;Parent=gene-LP088_RS07415;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005107115.1;locus_tag=LP088_RS07415;partial=true;product=Cys-tRNA(Pro) deacylase;pseudo=true;start_range=.,1418531;transl_table=11 NZ_CP087814.1 RefSeq gene 1418647 1418778 . - . ID=gene-LP088_RS07420;Name=LP088_RS07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07420 NZ_CP087814.1 GeneMarkS-2+ CDS 1418647 1418778 . - 0 ID=cds-WP_264675865.1;Parent=gene-LP088_RS07420;Dbxref=Genbank:WP_264675865.1;Name=WP_264675865.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS07420;product=hypothetical protein;protein_id=WP_264675865.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1418779 1419072 . - . ID=gene-LP088_RS07425;Name=LP088_RS07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07425;old_locus_tag=LP088_07360 NZ_CP087814.1 GeneMarkS-2+ CDS 1418779 1419072 . - 0 ID=cds-WP_112742313.1;Parent=gene-LP088_RS07425;Dbxref=Genbank:WP_112742313.1;Name=WP_112742313.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS07425;product=hypothetical protein;protein_id=WP_112742313.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 1419074 1419617 . - . ID=gene-LP088_RS07430;Name=LP088_RS07430;end_range=1419617,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS07430;old_locus_tag=LP088_07365;partial=true;pseudo=true NZ_CP087814.1 Protein Homology CDS 1419074 1419617 . - 0 ID=cds-LP088_RS07430;Parent=gene-LP088_RS07430;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009073,GO:0004107;end_range=1419617,.;gbkey=CDS;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004995323.1;locus_tag=LP088_RS07430;partial=true;product=chorismate synthase;pseudo=true;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 1419646 1420276 . - . ID=gene-LP088_RS07435;Name=LP088_RS07435;end_range=1420276,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS07435;old_locus_tag=LP088_07370;partial=true;pseudo=true NZ_CP087814.1 Protein Homology CDS 1419646 1420276 . - 0 ID=cds-LP088_RS07435;Parent=gene-LP088_RS07435;Note=programmed frameshift%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=1420276,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611661.1;locus_tag=LP088_RS07435;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 1420417 1420926 . - . ID=gene-LP088_RS07440;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=pseudogene;locus_tag=LP088_RS07440;old_locus_tag=LP088_07375;partial=true;pseudo=true;start_range=.,1420417 NZ_CP087814.1 Protein Homology CDS 1420417 1420926 . - 0 ID=cds-LP088_RS07440;Parent=gene-LP088_RS07440;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0009423,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004995323.1;locus_tag=LP088_RS07440;partial=true;product=chorismate synthase;pseudo=true;start_range=.,1420417;transl_table=11 NZ_CP087814.1 RefSeq gene 1420936 1421343 . - . ID=gene-LP088_RS07445;Name=LP088_RS07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07445;old_locus_tag=LP088_07380 NZ_CP087814.1 GeneMarkS-2+ CDS 1420936 1421343 . - 0 ID=cds-WP_112742314.1;Parent=gene-LP088_RS07445;Dbxref=Genbank:WP_112742314.1;Name=WP_112742314.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS07445;product=HNH endonuclease;protein_id=WP_112742314.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1421343 1422476 . - . ID=gene-LP088_RS07450;Name=prmB;gbkey=Gene;gene=prmB;gene_biotype=protein_coding;locus_tag=LP088_RS07450;old_locus_tag=LP088_07385 NZ_CP087814.1 Protein Homology CDS 1421343 1422476 . - 0 ID=cds-WP_112742315.1;Parent=gene-LP088_RS07450;Dbxref=Genbank:WP_112742315.1;Name=WP_112742315.1;Ontology_term=GO:0018364,GO:0042273,GO:0008276,GO:0008757;gbkey=CDS;gene=prmB;go_function=protein methyltransferase activity|0008276||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=peptidyl-glutamine methylation|0018364||IEA,ribosomal large subunit biogenesis|0042273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003660172.1;locus_tag=LP088_RS07450;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=WP_112742315.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1422732 1423889 . + . ID=gene-LP088_RS07455;Name=LP088_RS07455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07455;old_locus_tag=LP088_07390 NZ_CP087814.1 Protein Homology CDS 1422732 1423889 . + 0 ID=cds-WP_112742316.1;Parent=gene-LP088_RS07455;Dbxref=Genbank:WP_112742316.1;Name=WP_112742316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201198.1;locus_tag=LP088_RS07455;product=cupin domain-containing protein;protein_id=WP_112742316.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1424022 1425392 . + . ID=gene-LP088_RS07460;Name=LP088_RS07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07460;old_locus_tag=LP088_07395 NZ_CP087814.1 Protein Homology CDS 1424022 1425392 . + 0 ID=cds-WP_264675866.1;Parent=gene-LP088_RS07460;Dbxref=Genbank:WP_264675866.1;Name=WP_264675866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004809593.1;locus_tag=LP088_RS07460;product=AarF/ABC1/UbiB kinase family protein;protein_id=WP_264675866.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1425408 1426295 . - . ID=gene-LP088_RS07465;Name=LP088_RS07465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07465;old_locus_tag=LP088_07400 NZ_CP087814.1 Protein Homology CDS 1425408 1426295 . - 0 ID=cds-WP_228157686.1;Parent=gene-LP088_RS07465;Dbxref=Genbank:WP_228157686.1;Name=WP_228157686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003659866.1;locus_tag=LP088_RS07465;product=LysR family transcriptional regulator;protein_id=WP_228157686.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1427274 1428185 . - . ID=gene-LP088_RS07470;Name=LP088_RS07470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07470;old_locus_tag=LP088_07405 NZ_CP087814.1 Protein Homology CDS 1427274 1428185 . - 0 ID=cds-WP_078275141.1;Parent=gene-LP088_RS07470;Dbxref=Genbank:WP_078275141.1;Name=WP_078275141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657918.1;locus_tag=LP088_RS07470;product=lysine exporter LysO family protein;protein_id=WP_078275141.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1428376 1429278 . - . ID=gene-LP088_RS07475;Name=LP088_RS07475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07475;old_locus_tag=LP088_07410 NZ_CP087814.1 Protein Homology CDS 1428376 1429278 . - 0 ID=cds-WP_078275115.1;Parent=gene-LP088_RS07475;Dbxref=Genbank:WP_078275115.1;Name=WP_078275115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003659373.1;locus_tag=LP088_RS07475;product=neutral zinc metallopeptidase;protein_id=WP_078275115.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1429403 1430080 . + . ID=gene-LP088_RS07480;Name=LP088_RS07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07480;old_locus_tag=LP088_07415 NZ_CP087814.1 Protein Homology CDS 1429403 1430080 . + 0 ID=cds-WP_112742317.1;Parent=gene-LP088_RS07480;Dbxref=Genbank:WP_112742317.1;Name=WP_112742317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009502015.1;locus_tag=LP088_RS07480;product=carboxylesterase;protein_id=WP_112742317.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1430126 1430662 . - . ID=gene-LP088_RS07485;Name=LP088_RS07485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07485;old_locus_tag=LP088_07420 NZ_CP087814.1 GeneMarkS-2+ CDS 1430126 1430662 . - 0 ID=cds-WP_112742318.1;Parent=gene-LP088_RS07485;Dbxref=Genbank:WP_112742318.1;Name=WP_112742318.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS07485;product=hypothetical protein;protein_id=WP_112742318.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1430784 1432193 . - . ID=gene-LP088_RS07490;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=LP088_RS07490;old_locus_tag=LP088_07425 NZ_CP087814.1 Protein Homology CDS 1430784 1432193 . - 0 ID=cds-WP_112742319.1;Parent=gene-LP088_RS07490;Dbxref=Genbank:WP_112742319.1;Name=WP_112742319.1;Ontology_term=GO:0006542,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamate-ammonia ligase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657911.1;locus_tag=LP088_RS07490;product=type I glutamate--ammonia ligase;protein_id=WP_112742319.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1432357 1432662 . - . ID=gene-LP088_RS07495;Name=LP088_RS07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07495;old_locus_tag=LP088_07430 NZ_CP087814.1 Protein Homology CDS 1432357 1432662 . - 0 ID=cds-WP_029102195.1;Parent=gene-LP088_RS07495;Dbxref=Genbank:WP_029102195.1;Name=WP_029102195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657909.1;locus_tag=LP088_RS07495;product=hypothetical protein;protein_id=WP_029102195.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1432674 1433189 . - . ID=gene-LP088_RS07500;Name=LP088_RS07500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07500;old_locus_tag=LP088_07435 NZ_CP087814.1 GeneMarkS-2+ CDS 1432674 1433189 . - 0 ID=cds-WP_112742320.1;Parent=gene-LP088_RS07500;Dbxref=Genbank:WP_112742320.1;Name=WP_112742320.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS07500;product=hypothetical protein;protein_id=WP_112742320.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 1433340 1434140 . - . ID=gene-LP088_RS07505;Name=yghU;gbkey=Gene;gene=yghU;gene_biotype=pseudogene;locus_tag=LP088_RS07505;old_locus_tag=LP088_07440;pseudo=true NZ_CP087814.1 Protein Homology CDS 1433340 1434140 . - 0 ID=cds-LP088_RS07505;Parent=gene-LP088_RS07505;Note=internal stop;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=yghU;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513712.1;locus_tag=LP088_RS07505;product=glutathione-dependent disulfide-bond oxidoreductase;pseudo=true;transl_table=11 NZ_CP087814.1 RefSeq gene 1434155 1434676 . - . ID=gene-LP088_RS07510;Name=LP088_RS07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07510;old_locus_tag=LP088_07445 NZ_CP087814.1 GeneMarkS-2+ CDS 1434155 1434676 . - 0 ID=cds-WP_078275120.1;Parent=gene-LP088_RS07510;Dbxref=Genbank:WP_078275120.1;Name=WP_078275120.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS07510;product=hypothetical protein;protein_id=WP_078275120.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1434719 1435192 . - . ID=gene-LP088_RS07515;Name=LP088_RS07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07515;old_locus_tag=LP088_07450 NZ_CP087814.1 GeneMarkS-2+ CDS 1434719 1435192 . - 0 ID=cds-WP_078275121.1;Parent=gene-LP088_RS07515;Dbxref=Genbank:WP_078275121.1;Name=WP_078275121.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS07515;product=hypothetical protein;protein_id=WP_078275121.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1435202 1435747 . - . ID=gene-LP088_RS07520;Name=LP088_RS07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07520;old_locus_tag=LP088_07455 NZ_CP087814.1 GeneMarkS-2+ CDS 1435202 1435747 . - 0 ID=cds-WP_112742321.1;Parent=gene-LP088_RS07520;Dbxref=Genbank:WP_112742321.1;Name=WP_112742321.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS07520;product=hypothetical protein;protein_id=WP_112742321.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1435740 1436369 . - . ID=gene-LP088_RS07525;Name=LP088_RS07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07525;old_locus_tag=LP088_07460 NZ_CP087814.1 Protein Homology CDS 1435740 1436369 . - 0 ID=cds-WP_078275123.1;Parent=gene-LP088_RS07525;Dbxref=Genbank:WP_078275123.1;Name=WP_078275123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019518952.1;locus_tag=LP088_RS07525;product=GDSL-type esterase/lipase family protein;protein_id=WP_078275123.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1436453 1438102 . - . ID=gene-LP088_RS07530;Name=LP088_RS07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07530;old_locus_tag=LP088_07465 NZ_CP087814.1 Protein Homology CDS 1436453 1438102 . - 0 ID=cds-WP_264675867.1;Parent=gene-LP088_RS07530;Dbxref=Genbank:WP_264675867.1;Name=WP_264675867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003658244.1;locus_tag=LP088_RS07530;product=dihydrolipoyllysine-residue acetyltransferase;protein_id=WP_264675867.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1438114 1440945 . - . ID=gene-LP088_RS07535;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=LP088_RS07535;old_locus_tag=LP088_07470 NZ_CP087814.1 Protein Homology CDS 1438114 1440945 . - 0 ID=cds-WP_112742323.1;Parent=gene-LP088_RS07535;Dbxref=Genbank:WP_112742323.1;Name=WP_112742323.1;Ontology_term=GO:0006086,GO:0004738,GO:0045250;gbkey=CDS;gene=aceE;go_component=cytosolic pyruvate dehydrogenase complex|0045250||IEA;go_function=pyruvate dehydrogenase activity|0004738||IEA;go_process=acetyl-CoA biosynthetic process from pyruvate|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198169.1;locus_tag=LP088_RS07535;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=WP_112742323.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1441288 1441989 . + . ID=gene-LP088_RS07540;Name=LP088_RS07540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07540;old_locus_tag=LP088_07475 NZ_CP087814.1 Protein Homology CDS 1441288 1441989 . + 0 ID=cds-WP_078275358.1-3;Parent=gene-LP088_RS07540;Dbxref=Genbank:WP_078275358.1;Name=WP_078275358.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015586042.1;locus_tag=LP088_RS07540;product=IS1 family transposase;protein_id=WP_078275358.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1442270 1442800 . - . ID=gene-LP088_RS07545;Name=LP088_RS07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07545;old_locus_tag=LP088_07480 NZ_CP087814.1 GeneMarkS-2+ CDS 1442270 1442800 . - 0 ID=cds-WP_112742324.1;Parent=gene-LP088_RS07545;Dbxref=Genbank:WP_112742324.1;Name=WP_112742324.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS07545;product=hypothetical protein;protein_id=WP_112742324.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1443089 1443619 . - . ID=gene-LP088_RS07550;Name=LP088_RS07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07550;old_locus_tag=LP088_07485 NZ_CP087814.1 Protein Homology CDS 1443089 1443619 . - 0 ID=cds-WP_112742325.1;Parent=gene-LP088_RS07550;Dbxref=Genbank:WP_112742325.1;Name=WP_112742325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003658094.1;locus_tag=LP088_RS07550;product=tRNA (cytidine(34)-2'-O)-methyltransferase;protein_id=WP_112742325.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1443641 1444822 . - . ID=gene-LP088_RS07555;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=LP088_RS07555;old_locus_tag=LP088_07490 NZ_CP087814.1 Protein Homology CDS 1443641 1444822 . - 0 ID=cds-WP_112742326.1;Parent=gene-LP088_RS07555;Dbxref=Genbank:WP_112742326.1;Name=WP_112742326.1;Ontology_term=GO:0006779,GO:0051989;gbkey=CDS;gene=hemW;go_function=coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005013072.1;locus_tag=LP088_RS07555;product=radical SAM family heme chaperone HemW;protein_id=WP_112742326.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1444943 1446118 . - . ID=gene-LP088_RS07560;Name=LP088_RS07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07560;old_locus_tag=LP088_07495 NZ_CP087814.1 Protein Homology CDS 1444943 1446118 . - 0 ID=cds-WP_112742327.1;Parent=gene-LP088_RS07560;Dbxref=Genbank:WP_112742327.1;Name=WP_112742327.1;Ontology_term=GO:0003676,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280219.1;locus_tag=LP088_RS07560;product=DEAD/DEAH box helicase;protein_id=WP_112742327.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1446260 1446667 . - . ID=gene-LP088_RS07565;Name=LP088_RS07565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07565;old_locus_tag=LP088_07500 NZ_CP087814.1 GeneMarkS-2+ CDS 1446260 1446667 . - 0 ID=cds-WP_112742328.1;Parent=gene-LP088_RS07565;Dbxref=Genbank:WP_112742328.1;Name=WP_112742328.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS07565;product=hypothetical protein;protein_id=WP_112742328.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1446829 1447041 . - . ID=gene-LP088_RS07570;Name=LP088_RS07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07570;old_locus_tag=LP088_07505 NZ_CP087814.1 Protein Homology CDS 1446829 1447041 . - 0 ID=cds-WP_029102179.1;Parent=gene-LP088_RS07570;Dbxref=Genbank:WP_029102179.1;Name=WP_029102179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009502262.1;locus_tag=LP088_RS07570;product=cold shock domain-containing protein;protein_id=WP_029102179.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1447268 1447762 . + . ID=gene-LP088_RS07575;Name=aroQ;gbkey=Gene;gene=aroQ;gene_biotype=protein_coding;locus_tag=LP088_RS07575;old_locus_tag=LP088_07510 NZ_CP087814.1 Protein Homology CDS 1447268 1447762 . + 0 ID=cds-WP_078275131.1;Parent=gene-LP088_RS07575;Dbxref=Genbank:WP_078275131.1;Name=WP_078275131.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroQ;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019672823.1;locus_tag=LP088_RS07575;product=type II 3-dehydroquinate dehydratase;protein_id=WP_078275131.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1447759 1449354 . + . ID=gene-LP088_RS07580;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=LP088_RS07580;old_locus_tag=LP088_07515 NZ_CP087814.1 Protein Homology CDS 1447759 1449354 . + 0 ID=cds-WP_264675868.1;Parent=gene-LP088_RS07580;Dbxref=Genbank:WP_264675868.1;Name=WP_264675868.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=dnaQ;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: protein motif:HMM:NF004316.1;locus_tag=LP088_RS07580;product=DNA polymerase III subunit epsilon;protein_id=WP_264675868.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1449464 1451149 . + . ID=gene-LP088_RS07585;Name=LP088_RS07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07585;old_locus_tag=LP088_07520 NZ_CP087814.1 GeneMarkS-2+ CDS 1449464 1451149 . + 0 ID=cds-WP_112742329.1;Parent=gene-LP088_RS07585;Dbxref=Genbank:WP_112742329.1;Name=WP_112742329.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS07585;product=hypothetical protein;protein_id=WP_112742329.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1451146 1452012 . + . ID=gene-LP088_RS07590;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=LP088_RS07590;old_locus_tag=LP088_07525 NZ_CP087814.1 Protein Homology CDS 1451146 1452012 . + 0 ID=cds-WP_112742330.1;Parent=gene-LP088_RS07590;Dbxref=Genbank:WP_112742330.1;Name=WP_112742330.1;Ontology_term=GO:0000210,GO:0016787;gbkey=CDS;gene=nudC;go_function=NAD+ diphosphatase activity|0000210||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF001299.0;locus_tag=LP088_RS07590;product=NAD(+) diphosphatase;protein_id=WP_112742330.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1452203 1453933 . - . ID=gene-LP088_RS07595;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=LP088_RS07595;old_locus_tag=LP088_07530 NZ_CP087814.1 Protein Homology CDS 1452203 1453933 . - 0 ID=cds-WP_112742331.1;Parent=gene-LP088_RS07595;Dbxref=Genbank:WP_112742331.1;Name=WP_112742331.1;Ontology_term=GO:0009098,GO:0003852;gbkey=CDS;gene=leuA;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019671942.1;locus_tag=LP088_RS07595;product=2-isopropylmalate synthase;protein_id=WP_112742331.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1454178 1454642 . + . ID=gene-LP088_RS07600;Name=LP088_RS07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07600;old_locus_tag=LP088_07535 NZ_CP087814.1 Protein Homology CDS 1454178 1454642 . + 0 ID=cds-WP_078275135.1;Parent=gene-LP088_RS07600;Dbxref=Genbank:WP_078275135.1;Name=WP_078275135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003671190.1;locus_tag=LP088_RS07600;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_078275135.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1454649 1455035 . - . ID=gene-LP088_RS07605;Name=LP088_RS07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07605;old_locus_tag=LP088_07540 NZ_CP087814.1 Protein Homology CDS 1454649 1455035 . - 0 ID=cds-WP_029102174.1;Parent=gene-LP088_RS07605;Dbxref=Genbank:WP_029102174.1;Name=WP_029102174.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024252.2;locus_tag=LP088_RS07605;product=helix-turn-helix domain-containing protein;protein_id=WP_029102174.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1455483 1456160 . - . ID=gene-LP088_RS07610;Name=LP088_RS07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07610;old_locus_tag=LP088_07545 NZ_CP087814.1 Protein Homology CDS 1455483 1456160 . - 0 ID=cds-WP_264675869.1;Parent=gene-LP088_RS07610;Dbxref=Genbank:WP_264675869.1;Name=WP_264675869.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012920.2;locus_tag=LP088_RS07610;product=helix-turn-helix domain-containing protein;protein_id=WP_264675869.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1456392 1456634 . + . ID=gene-LP088_RS07615;Name=LP088_RS07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07615;old_locus_tag=LP088_07550 NZ_CP087814.1 Protein Homology CDS 1456392 1456634 . + 0 ID=cds-WP_264675870.1;Parent=gene-LP088_RS07615;Dbxref=Genbank:WP_264675870.1;Name=WP_264675870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148389.1;locus_tag=LP088_RS07615;product=helix-turn-helix domain-containing protein;protein_id=WP_264675870.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1456662 1458656 . + . ID=gene-LP088_RS07620;Name=LP088_RS07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07620;old_locus_tag=LP088_07555 NZ_CP087814.1 Protein Homology CDS 1456662 1458656 . + 0 ID=cds-WP_264675871.1;Parent=gene-LP088_RS07620;Dbxref=Genbank:WP_264675871.1;Name=WP_264675871.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF014380.2;locus_tag=LP088_RS07620;product=DNA-binding protein;protein_id=WP_264675871.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1458684 1459031 . + . ID=gene-LP088_RS07625;Name=LP088_RS07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07625;old_locus_tag=LP088_07560 NZ_CP087814.1 GeneMarkS-2+ CDS 1458684 1459031 . + 0 ID=cds-WP_264675872.1;Parent=gene-LP088_RS07625;Dbxref=Genbank:WP_264675872.1;Name=WP_264675872.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS07625;product=hypothetical protein;protein_id=WP_264675872.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1459028 1459903 . + . ID=gene-LP088_RS07630;Name=LP088_RS07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07630;old_locus_tag=LP088_07565 NZ_CP087814.1 Protein Homology CDS 1459028 1459903 . + 0 ID=cds-WP_264675873.1;Parent=gene-LP088_RS07630;Dbxref=Genbank:WP_264675873.1;Name=WP_264675873.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024793.2;locus_tag=LP088_RS07630;product=AAA family ATPase;protein_id=WP_264675873.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1459915 1460298 . + . ID=gene-LP088_RS07635;Name=LP088_RS07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07635;old_locus_tag=LP088_07570 NZ_CP087814.1 Protein Homology CDS 1459915 1460298 . + 0 ID=cds-WP_264675874.1;Parent=gene-LP088_RS07635;Dbxref=Genbank:WP_264675874.1;Name=WP_264675874.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018011.2;locus_tag=LP088_RS07635;product=regulatory protein GemA;protein_id=WP_264675874.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1460346 1460468 . + . ID=gene-LP088_RS07640;Name=LP088_RS07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07640 NZ_CP087814.1 GeneMarkS-2+ CDS 1460346 1460468 . + 0 ID=cds-WP_264675875.1;Parent=gene-LP088_RS07640;Dbxref=Genbank:WP_264675875.1;Name=WP_264675875.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS07640;product=hypothetical protein;protein_id=WP_264675875.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1460548 1461780 . + . ID=gene-LP088_RS07645;Name=LP088_RS07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07645;old_locus_tag=LP088_07575 NZ_CP087814.1 GeneMarkS-2+ CDS 1460548 1461780 . + 0 ID=cds-WP_264690294.1;Parent=gene-LP088_RS07645;Dbxref=Genbank:WP_264690294.1;Name=WP_264690294.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS07645;product=hypothetical protein;protein_id=WP_264690294.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1461834 1462640 . + . ID=gene-LP088_RS07650;Name=LP088_RS07650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07650;old_locus_tag=LP088_07580 NZ_CP087814.1 GeneMarkS-2+ CDS 1461834 1462640 . + 0 ID=cds-WP_112741850.1-2;Parent=gene-LP088_RS07650;Dbxref=Genbank:WP_112741850.1;Name=WP_112741850.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS07650;product=hypothetical protein;protein_id=WP_112741850.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1462641 1462985 . + . ID=gene-LP088_RS07655;Name=LP088_RS07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07655;old_locus_tag=LP088_07585 NZ_CP087814.1 GeneMarkS-2+ CDS 1462641 1462985 . + 0 ID=cds-WP_078274937.1-2;Parent=gene-LP088_RS07655;Dbxref=Genbank:WP_078274937.1;Name=WP_078274937.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS07655;product=hypothetical protein;protein_id=WP_078274937.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1462973 1464802 . + . ID=gene-LP088_RS07660;Name=LP088_RS07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07660;old_locus_tag=LP088_07590 NZ_CP087814.1 GeneMarkS-2+ CDS 1462973 1464802 . + 0 ID=cds-WP_078274936.1-2;Parent=gene-LP088_RS07660;Dbxref=Genbank:WP_078274936.1;Name=WP_078274936.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS07660;product=hypothetical protein;protein_id=WP_078274936.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1464861 1465085 . + . ID=gene-LP088_RS07665;Name=LP088_RS07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07665;old_locus_tag=LP088_07595 NZ_CP087814.1 GeneMarkS-2+ CDS 1464861 1465085 . + 0 ID=cds-WP_078274935.1-2;Parent=gene-LP088_RS07665;Dbxref=Genbank:WP_078274935.1;Name=WP_078274935.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS07665;product=DUF2190 family protein;protein_id=WP_078274935.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1465146 1465379 . + . ID=gene-LP088_RS07670;Name=LP088_RS07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07670;old_locus_tag=LP088_07600 NZ_CP087814.1 GeneMarkS-2+ CDS 1465146 1465379 . + 0 ID=cds-WP_264675877.1;Parent=gene-LP088_RS07670;Dbxref=Genbank:WP_264675877.1;Name=WP_264675877.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS07670;product=hypothetical protein;protein_id=WP_264675877.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1465385 1466023 . + . ID=gene-LP088_RS07675;Name=LP088_RS07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07675;old_locus_tag=LP088_07605 NZ_CP087814.1 GeneMarkS-2+ CDS 1465385 1466023 . + 0 ID=cds-WP_078275137.1;Parent=gene-LP088_RS07675;Dbxref=Genbank:WP_078275137.1;Name=WP_078275137.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS07675;product=hypothetical protein;protein_id=WP_078275137.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1466277 1466888 . - . ID=gene-LP088_RS07680;Name=LP088_RS07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07680;old_locus_tag=LP088_07610 NZ_CP087814.1 Protein Homology CDS 1466277 1466888 . - 0 ID=cds-WP_078275139.1;Parent=gene-LP088_RS07680;Dbxref=Genbank:WP_078275139.1;Name=WP_078275139.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014689.2;locus_tag=LP088_RS07680;product=manganese efflux pump MntP family protein;protein_id=WP_078275139.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1466922 1467110 . - . ID=gene-LP088_RS07685;Name=LP088_RS07685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07685;old_locus_tag=LP088_07615 NZ_CP087814.1 GeneMarkS-2+ CDS 1466922 1467110 . - 0 ID=cds-WP_143821739.1;Parent=gene-LP088_RS07685;Dbxref=Genbank:WP_143821739.1;Name=WP_143821739.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS07685;product=hypothetical protein;protein_id=WP_143821739.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 1467171 1467732 . + . ID=gene-LP088_RS07690;Name=LP088_RS07690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS07690;old_locus_tag=LP088_07620;pseudo=true NZ_CP087814.1 Protein Homology CDS 1467171 1467732 . + 0 ID=cds-LP088_RS07690;Parent=gene-LP088_RS07690;Note=frameshifted;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011959554.1;locus_tag=LP088_RS07690;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_CP087814.1 RefSeq gene 1468027 1468275 . + . ID=gene-LP088_RS07695;Name=LP088_RS07695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07695;old_locus_tag=LP088_07625 NZ_CP087814.1 GeneMarkS-2+ CDS 1468027 1468275 . + 0 ID=cds-WP_264675878.1;Parent=gene-LP088_RS07695;Dbxref=Genbank:WP_264675878.1;Name=WP_264675878.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS07695;product=hypothetical protein;protein_id=WP_264675878.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1468372 1468824 . - . ID=gene-LP088_RS07700;Name=LP088_RS07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07700;old_locus_tag=LP088_07630 NZ_CP087814.1 GeneMarkS-2+ CDS 1468372 1468824 . - 0 ID=cds-WP_078273747.1;Parent=gene-LP088_RS07700;Dbxref=Genbank:WP_078273747.1;Name=WP_078273747.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS07700;product=hypothetical protein;protein_id=WP_078273747.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1468826 1472353 . - . ID=gene-LP088_RS07705;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=LP088_RS07705;old_locus_tag=LP088_07635 NZ_CP087814.1 Protein Homology CDS 1468826 1472353 . - 0 ID=cds-WP_078273748.1;Parent=gene-LP088_RS07705;Dbxref=Genbank:WP_078273748.1;Name=WP_078273748.1;Ontology_term=GO:0006281,GO:0003690,GO:0005515,GO:0005524,GO:0016887;gbkey=CDS;gene=mfd;go_function=double-stranded DNA binding|0003690||IEA,protein binding|0005515||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007395258.1;locus_tag=LP088_RS07705;product=transcription-repair coupling factor;protein_id=WP_078273748.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1472417 1474240 . - . ID=gene-LP088_RS07710;Name=LP088_RS07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07710;old_locus_tag=LP088_07640 NZ_CP087814.1 Protein Homology CDS 1472417 1474240 . - 0 ID=cds-WP_228157687.1;Parent=gene-LP088_RS07710;Dbxref=Genbank:WP_228157687.1;Name=WP_228157687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003672175.1;locus_tag=LP088_RS07710;product=SurA N-terminal domain-containing protein;protein_id=WP_228157687.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 1474351 1474698 . - . ID=gene-LP088_RS07715;Name=LP088_RS07715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS07715;old_locus_tag=LP088_07645;pseudo=true NZ_CP087814.1 Protein Homology CDS 1474351 1474698 . - 0 ID=cds-LP088_RS07715;Parent=gene-LP088_RS07715;Note=internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018745.2;locus_tag=LP088_RS07715;product=DUF1345 domain-containing protein;pseudo=true;transl_table=11 NZ_CP087814.1 RefSeq gene 1474586 1475077 . - . ID=gene-LP088_RS07720;Name=LP088_RS07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07720;old_locus_tag=LP088_07650 NZ_CP087814.1 Protein Homology CDS 1474586 1475077 . - 0 ID=cds-WP_158079625.1;Parent=gene-LP088_RS07720;Dbxref=Genbank:WP_158079625.1;Name=WP_158079625.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018745.2;locus_tag=LP088_RS07720;product=DUF1345 domain-containing protein;protein_id=WP_158079625.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1475155 1475784 . - . ID=gene-LP088_RS07725;Name=LP088_RS07725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07725;old_locus_tag=LP088_07655 NZ_CP087814.1 Protein Homology CDS 1475155 1475784 . - 0 ID=cds-WP_029102168.1;Parent=gene-LP088_RS07725;Dbxref=Genbank:WP_029102168.1;Name=WP_029102168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003658280.1;locus_tag=LP088_RS07725;product=MarC family protein;protein_id=WP_029102168.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1475931 1476620 . - . ID=gene-LP088_RS07730;Name=LP088_RS07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07730;old_locus_tag=LP088_07660 NZ_CP087814.1 Protein Homology CDS 1475931 1476620 . - 0 ID=cds-WP_264675879.1;Parent=gene-LP088_RS07730;Dbxref=Genbank:WP_264675879.1;Name=WP_264675879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005061021.1;locus_tag=LP088_RS07730;product=hypothetical protein;protein_id=WP_264675879.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1476772 1477971 . - . ID=gene-LP088_RS07735;Name=LP088_RS07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07735;old_locus_tag=LP088_07665 NZ_CP087814.1 Protein Homology CDS 1476772 1477971 . - 0 ID=cds-WP_228157688.1;Parent=gene-LP088_RS07735;Dbxref=Genbank:WP_228157688.1;Name=WP_228157688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013107984.1;locus_tag=LP088_RS07735;product=glycosyltransferase;protein_id=WP_228157688.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1477977 1478477 . - . ID=gene-LP088_RS07740;Name=LP088_RS07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07740;old_locus_tag=LP088_07670 NZ_CP087814.1 Protein Homology CDS 1477977 1478477 . - 0 ID=cds-WP_078273801.1;Parent=gene-LP088_RS07740;Dbxref=Genbank:WP_078273801.1;Name=WP_078273801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657947.1;locus_tag=LP088_RS07740;product=peroxiredoxin;protein_id=WP_078273801.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1478675 1479988 . + . ID=gene-LP088_RS07745;Name=LP088_RS07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07745;old_locus_tag=LP088_07675 NZ_CP087814.1 Protein Homology CDS 1478675 1479988 . + 0 ID=cds-WP_078273755.1;Parent=gene-LP088_RS07745;Dbxref=Genbank:WP_078273755.1;Name=WP_078273755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657949.1;locus_tag=LP088_RS07745;product=NCS2 family permease;protein_id=WP_078273755.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1480141 1480698 . + . ID=gene-LP088_RS07750;Name=LP088_RS07750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07750;old_locus_tag=LP088_07680 NZ_CP087814.1 GeneMarkS-2+ CDS 1480141 1480698 . + 0 ID=cds-WP_264675880.1;Parent=gene-LP088_RS07750;Dbxref=Genbank:WP_264675880.1;Name=WP_264675880.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS07750;product=hypothetical protein;protein_id=WP_264675880.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1480843 1481430 . - . ID=gene-LP088_RS07755;Name=LP088_RS07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07755;old_locus_tag=LP088_07685 NZ_CP087814.1 Protein Homology CDS 1480843 1481430 . - 0 ID=cds-WP_078273757.1;Parent=gene-LP088_RS07755;Dbxref=Genbank:WP_078273757.1;Name=WP_078273757.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037679.2;locus_tag=LP088_RS07755;product=TetR/AcrR family transcriptional regulator;protein_id=WP_078273757.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1481471 1481800 . - . ID=gene-LP088_RS07760;Name=LP088_RS07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07760;old_locus_tag=LP088_07690 NZ_CP087814.1 Protein Homology CDS 1481471 1481800 . - 0 ID=cds-WP_264676333.1;Parent=gene-LP088_RS07760;Dbxref=Genbank:WP_264676333.1;Name=WP_264676333.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017397111.1;locus_tag=LP088_RS07760;product=SMR family transporter;protein_id=WP_264676333.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1482034 1482783 . - . ID=gene-LP088_RS07765;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=LP088_RS07765;old_locus_tag=LP088_07695 NZ_CP087814.1 Protein Homology CDS 1482034 1482783 . - 0 ID=cds-WP_078273759.1;Parent=gene-LP088_RS07765;Dbxref=Genbank:WP_078273759.1;Name=WP_078273759.1;Ontology_term=GO:0008616;gbkey=CDS;gene=queC;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011960983.1;locus_tag=LP088_RS07765;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WP_078273759.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1483012 1484319 . + . ID=gene-LP088_RS07770;Name=LP088_RS07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07770;old_locus_tag=LP088_07700 NZ_CP087814.1 Protein Homology CDS 1483012 1484319 . + 0 ID=cds-WP_078273760.1;Parent=gene-LP088_RS07770;Dbxref=Genbank:WP_078273760.1;Name=WP_078273760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177577.1;locus_tag=LP088_RS07770;product=NCS2 family permease;protein_id=WP_078273760.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1484749 1485474 . - . ID=gene-LP088_RS07775;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=LP088_RS07775;old_locus_tag=LP088_07705 NZ_CP087814.1 Protein Homology CDS 1484749 1485474 . - 0 ID=cds-WP_078273761.1;Parent=gene-LP088_RS07775;Dbxref=Genbank:WP_078273761.1;Name=WP_078273761.1;Ontology_term=GO:0015920,GO:0015221,GO:0042626,GO:0009898,GO:0043190;gbkey=CDS;gene=lptB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003659750.1;locus_tag=LP088_RS07775;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_078273761.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1485471 1486001 . - . ID=gene-LP088_RS07780;Name=lptA;gbkey=Gene;gene=lptA;gene_biotype=protein_coding;locus_tag=LP088_RS07780;old_locus_tag=LP088_07710 NZ_CP087814.1 Protein Homology CDS 1485471 1486001 . - 0 ID=cds-WP_078273762.1;Parent=gene-LP088_RS07780;Dbxref=Genbank:WP_078273762.1;Name=WP_078273762.1;Ontology_term=GO:0015920,GO:0001530,GO:0030288,GO:0043190;gbkey=CDS;gene=lptA;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide binding|0001530||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009501237.1;locus_tag=LP088_RS07780;product=lipopolysaccharide transport periplasmic protein LptA;protein_id=WP_078273762.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1486023 1486598 . - . ID=gene-LP088_RS07785;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=LP088_RS07785;old_locus_tag=LP088_07715 NZ_CP087814.1 Protein Homology CDS 1486023 1486598 . - 0 ID=cds-WP_078273763.1;Parent=gene-LP088_RS07785;Dbxref=Genbank:WP_078273763.1;Name=WP_078273763.1;Ontology_term=GO:0015920,GO:0015221,GO:0005886;gbkey=CDS;gene=lptC;go_component=plasma membrane|0005886||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003666212.1;locus_tag=LP088_RS07785;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WP_078273763.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1486646 1487167 . - . ID=gene-LP088_RS07790;Name=LP088_RS07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07790;old_locus_tag=LP088_07720 NZ_CP087814.1 Protein Homology CDS 1486646 1487167 . - 0 ID=cds-WP_078273764.1;Parent=gene-LP088_RS07790;Dbxref=Genbank:WP_078273764.1;Name=WP_078273764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011960096.1;locus_tag=LP088_RS07790;product=HAD hydrolase family protein;protein_id=WP_078273764.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1487194 1488183 . - . ID=gene-LP088_RS07795;Name=LP088_RS07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07795;old_locus_tag=LP088_07725 NZ_CP087814.1 Protein Homology CDS 1487194 1488183 . - 0 ID=cds-WP_078273765.1;Parent=gene-LP088_RS07795;Dbxref=Genbank:WP_078273765.1;Name=WP_078273765.1;Ontology_term=GO:0005975,GO:0016853;gbkey=CDS;go_function=isomerase activity|0016853||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003669701.1;locus_tag=LP088_RS07795;product=KpsF/GutQ family sugar-phosphate isomerase;protein_id=WP_078273765.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1488345 1488950 . - . ID=gene-LP088_RS07800;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=LP088_RS07800;old_locus_tag=LP088_07730 NZ_CP087814.1 Protein Homology CDS 1488345 1488950 . - 0 ID=cds-WP_078273766.1;Parent=gene-LP088_RS07800;Dbxref=Genbank:WP_078273766.1;Name=WP_078273766.1;Ontology_term=GO:0006355,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198110.1;locus_tag=LP088_RS07800;product=RNA chaperone Hfq;protein_id=WP_078273766.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1489016 1490158 . - . ID=gene-LP088_RS07805;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=LP088_RS07805;old_locus_tag=LP088_07735 NZ_CP087814.1 Protein Homology CDS 1489016 1490158 . - 0 ID=cds-WP_112742337.1;Parent=gene-LP088_RS07805;Dbxref=Genbank:WP_112742337.1;Name=WP_112742337.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011960093.1;locus_tag=LP088_RS07805;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_112742337.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1490217 1490999 . - . ID=gene-LP088_RS07810;Name=LP088_RS07810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07810;old_locus_tag=LP088_07740 NZ_CP087814.1 GeneMarkS-2+ CDS 1490217 1490999 . - 0 ID=cds-WP_112742338.1;Parent=gene-LP088_RS07810;Dbxref=Genbank:WP_112742338.1;Name=WP_112742338.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS07810;product=hypothetical protein;protein_id=WP_112742338.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1490999 1491433 . - . ID=gene-LP088_RS07815;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=LP088_RS07815;old_locus_tag=LP088_07745 NZ_CP087814.1 Protein Homology CDS 1490999 1491433 . - 0 ID=cds-WP_112742339.1;Parent=gene-LP088_RS07815;Dbxref=Genbank:WP_112742339.1;Name=WP_112742339.1;Ontology_term=GO:0006400,GO:0016887,GO:0005737;gbkey=CDS;gene=tsaE;go_component=cytoplasm|0005737||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003658224.1;locus_tag=LP088_RS07815;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_112742339.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1491430 1491942 . - . ID=gene-LP088_RS07820;Name=LP088_RS07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07820;old_locus_tag=LP088_07750 NZ_CP087814.1 Protein Homology CDS 1491430 1491942 . - 0 ID=cds-WP_112742340.1;Parent=gene-LP088_RS07820;Dbxref=Genbank:WP_112742340.1;Name=WP_112742340.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025054.2;locus_tag=LP088_RS07820;product=GNAT family N-acetyltransferase;protein_id=WP_112742340.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1491923 1492177 . - . ID=gene-LP088_RS07825;Name=LP088_RS07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07825;old_locus_tag=LP088_07755 NZ_CP087814.1 Protein Homology CDS 1491923 1492177 . - 0 ID=cds-WP_029102153.1;Parent=gene-LP088_RS07825;Dbxref=Genbank:WP_029102153.1;Name=WP_029102153.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020265.2;locus_tag=LP088_RS07825;product=DUF1778 domain-containing protein;protein_id=WP_029102153.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1492187 1492783 . - . ID=gene-LP088_RS07830;Name=LP088_RS07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07830;old_locus_tag=LP088_07760 NZ_CP087814.1 Protein Homology CDS 1492187 1492783 . - 0 ID=cds-WP_078273770.1;Parent=gene-LP088_RS07830;Dbxref=Genbank:WP_078273770.1;Name=WP_078273770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007116356.1;locus_tag=LP088_RS07830;product=6-carboxytetrahydropterin synthase;protein_id=WP_078273770.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1492920 1493321 . - . ID=gene-LP088_RS07835;Name=LP088_RS07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07835;old_locus_tag=LP088_07765 NZ_CP087814.1 Protein Homology CDS 1492920 1493321 . - 0 ID=cds-WP_112742341.1;Parent=gene-LP088_RS07835;Dbxref=Genbank:WP_112742341.1;Name=WP_112742341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003663968.1;locus_tag=LP088_RS07835;product=biopolymer transporter ExbD;protein_id=WP_112742341.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1493331 1493885 . - . ID=gene-LP088_RS07840;Name=LP088_RS07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07840;old_locus_tag=LP088_07770 NZ_CP087814.1 Protein Homology CDS 1493331 1493885 . - 0 ID=cds-WP_078273772.1;Parent=gene-LP088_RS07840;Dbxref=Genbank:WP_078273772.1;Name=WP_078273772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003656764.1;locus_tag=LP088_RS07840;product=MotA/TolQ/ExbB proton channel family protein;protein_id=WP_078273772.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1493926 1494921 . - . ID=gene-LP088_RS07845;Name=LP088_RS07845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07845;old_locus_tag=LP088_07775 NZ_CP087814.1 GeneMarkS-2+ CDS 1493926 1494921 . - 0 ID=cds-WP_264675881.1;Parent=gene-LP088_RS07845;Dbxref=Genbank:WP_264675881.1;Name=WP_264675881.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS07845;product=energy transducer TonB;protein_id=WP_264675881.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1495099 1496295 . - . ID=gene-LP088_RS07850;Name=LP088_RS07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07850;old_locus_tag=LP088_07780 NZ_CP087814.1 Protein Homology CDS 1495099 1496295 . - 0 ID=cds-WP_143821662.1;Parent=gene-LP088_RS07850;Dbxref=Genbank:WP_143821662.1;Name=WP_143821662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003672140.1;locus_tag=LP088_RS07850;product=AI-2E family transporter;protein_id=WP_143821662.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1496482 1498380 . + . ID=gene-LP088_RS07855;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=LP088_RS07855;old_locus_tag=LP088_07785 NZ_CP087814.1 Protein Homology CDS 1496482 1498380 . + 0 ID=cds-WP_264675882.1;Parent=gene-LP088_RS07855;Dbxref=Genbank:WP_264675882.1;Name=WP_264675882.1;Ontology_term=GO:0009082,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003666403.1;locus_tag=LP088_RS07855;product=dihydroxy-acid dehydratase;protein_id=WP_264675882.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1498459 1498857 . - . ID=gene-LP088_RS07860;Name=LP088_RS07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07860;old_locus_tag=LP088_07790 NZ_CP087814.1 Protein Homology CDS 1498459 1498857 . - 0 ID=cds-WP_264675883.1;Parent=gene-LP088_RS07860;Dbxref=Genbank:WP_264675883.1;Name=WP_264675883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519528.1;locus_tag=LP088_RS07860;product=helix-turn-helix domain-containing protein;protein_id=WP_264675883.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1499017 1499730 . + . ID=gene-LP088_RS07865;Name=LP088_RS07865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07865;old_locus_tag=LP088_07795 NZ_CP087814.1 GeneMarkS-2+ CDS 1499017 1499730 . + 0 ID=cds-WP_112742346.1;Parent=gene-LP088_RS07865;Dbxref=Genbank:WP_112742346.1;Name=WP_112742346.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS07865;product=hypothetical protein;protein_id=WP_112742346.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1499787 1500257 . + . ID=gene-LP088_RS07870;Name=LP088_RS07870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07870;old_locus_tag=LP088_07800 NZ_CP087814.1 GeneMarkS-2+ CDS 1499787 1500257 . + 0 ID=cds-WP_112742347.1;Parent=gene-LP088_RS07870;Dbxref=Genbank:WP_112742347.1;Name=WP_112742347.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS07870;product=hypothetical protein;protein_id=WP_112742347.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1500259 1500795 . + . ID=gene-LP088_RS07875;Name=LP088_RS07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07875;old_locus_tag=LP088_07805 NZ_CP087814.1 GeneMarkS-2+ CDS 1500259 1500795 . + 0 ID=cds-WP_112742348.1;Parent=gene-LP088_RS07875;Dbxref=Genbank:WP_112742348.1;Name=WP_112742348.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS07875;product=hypothetical protein;protein_id=WP_112742348.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1500883 1501113 . + . ID=gene-LP088_RS07880;Name=LP088_RS07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07880;old_locus_tag=LP088_07810 NZ_CP087814.1 GeneMarkS-2+ CDS 1500883 1501113 . + 0 ID=cds-WP_112742349.1;Parent=gene-LP088_RS07880;Dbxref=Genbank:WP_112742349.1;Name=WP_112742349.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS07880;product=hypothetical protein;protein_id=WP_112742349.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1501113 1501463 . + . ID=gene-LP088_RS07885;Name=LP088_RS07885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07885;old_locus_tag=LP088_07815 NZ_CP087814.1 Protein Homology CDS 1501113 1501463 . + 0 ID=cds-WP_264676334.1;Parent=gene-LP088_RS07885;Dbxref=Genbank:WP_264676334.1;Name=WP_264676334.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017496.2;locus_tag=LP088_RS07885;product=Uma2 family endonuclease;protein_id=WP_264676334.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1501474 1502025 . + . ID=gene-LP088_RS07890;Name=LP088_RS07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07890;old_locus_tag=LP088_07820 NZ_CP087814.1 GeneMarkS-2+ CDS 1501474 1502025 . + 0 ID=cds-WP_112742351.1;Parent=gene-LP088_RS07890;Dbxref=Genbank:WP_112742351.1;Name=WP_112742351.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS07890;product=hypothetical protein;protein_id=WP_112742351.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1502060 1502845 . - . ID=gene-LP088_RS07895;Name=gloB;gbkey=Gene;gene=gloB;gene_biotype=protein_coding;locus_tag=LP088_RS07895;old_locus_tag=LP088_07825 NZ_CP087814.1 Protein Homology CDS 1502060 1502845 . - 0 ID=cds-WP_112742352.1;Parent=gene-LP088_RS07895;Dbxref=Genbank:WP_112742352.1;Name=WP_112742352.1;Ontology_term=GO:0019243,GO:0004416;gbkey=CDS;gene=gloB;go_function=hydroxyacylglutathione hydrolase activity|0004416||IEA;go_process=methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione|0019243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519928.1;locus_tag=LP088_RS07895;product=hydroxyacylglutathione hydrolase;protein_id=WP_112742352.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1503062 1504144 . - . ID=gene-LP088_RS07900;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=LP088_RS07900;old_locus_tag=LP088_07830 NZ_CP087814.1 Protein Homology CDS 1503062 1504144 . - 0 ID=cds-WP_112742353.1;Parent=gene-LP088_RS07900;Dbxref=Genbank:WP_112742353.1;Name=WP_112742353.1;Ontology_term=GO:0006564,GO:0003824,GO:0004648;gbkey=CDS;gene=serC;go_function=catalytic activity|0003824||IEA,O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003662497.1;locus_tag=LP088_RS07900;product=3-phosphoserine/phosphohydroxythreonine transaminase;protein_id=WP_112742353.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1504268 1505143 . - . ID=gene-LP088_RS07905;Name=LP088_RS07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07905;old_locus_tag=LP088_07835 NZ_CP087814.1 GeneMarkS-2+ CDS 1504268 1505143 . - 0 ID=cds-WP_078273780.1;Parent=gene-LP088_RS07905;Dbxref=Genbank:WP_078273780.1;Name=WP_078273780.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS07905;product=hypothetical protein;protein_id=WP_078273780.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1505419 1507815 . - . ID=gene-LP088_RS07910;Name=LP088_RS07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07910;old_locus_tag=LP088_07840 NZ_CP087814.1 Protein Homology CDS 1505419 1507815 . - 0 ID=cds-WP_078273781.1;Parent=gene-LP088_RS07910;Dbxref=Genbank:WP_078273781.1;Name=WP_078273781.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF013594.2;locus_tag=LP088_RS07910;product=M48 family metalloprotease;protein_id=WP_078273781.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1507830 1508420 . - . ID=gene-LP088_RS07915;Name=LP088_RS07915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07915;old_locus_tag=LP088_07845 NZ_CP087814.1 Protein Homology CDS 1507830 1508420 . - 0 ID=cds-WP_078273782.1;Parent=gene-LP088_RS07915;Dbxref=Genbank:WP_078273782.1;Name=WP_078273782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201928.1;locus_tag=LP088_RS07915;product=LemA family protein;protein_id=WP_078273782.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1508843 1509985 . + . ID=gene-LP088_RS07920;Name=rodA;gbkey=Gene;gene=rodA;gene_biotype=protein_coding;locus_tag=LP088_RS07920;old_locus_tag=LP088_07850 NZ_CP087814.1 Protein Homology CDS 1508843 1509985 . + 0 ID=cds-WP_078273783.1;Parent=gene-LP088_RS07920;Dbxref=Genbank:WP_078273783.1;Name=WP_078273783.1;Ontology_term=GO:0008360;gbkey=CDS;gene=rodA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019673822.1;locus_tag=LP088_RS07920;product=rod shape-determining protein RodA;protein_id=WP_078273783.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1510159 1510392 . - . ID=gene-LP088_RS07925;Name=LP088_RS07925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07925;old_locus_tag=LP088_07855 NZ_CP087814.1 Protein Homology CDS 1510159 1510392 . - 0 ID=cds-WP_228157784.1;Parent=gene-LP088_RS07925;Dbxref=Genbank:WP_228157784.1;Name=WP_228157784.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF015365.2;locus_tag=LP088_RS07925;product=IS1 family transposase;protein_id=WP_228157784.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1510382 1510540 . - . ID=gene-LP088_RS07930;Name=LP088_RS07930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07930;old_locus_tag=LP088_07860 NZ_CP087814.1 GeneMarkS-2+ CDS 1510382 1510540 . - 0 ID=cds-WP_228157785.1;Parent=gene-LP088_RS07930;Dbxref=Genbank:WP_228157785.1;Name=WP_228157785.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS07930;product=hypothetical protein;protein_id=WP_228157785.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 1510616 1510708 . - . ID=gene-LP088_RS07935;Name=LP088_RS07935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS07935;old_locus_tag=LP088_07865;partial=true;pseudo=true;start_range=.,1510616 NZ_CP087814.1 Protein Homology CDS 1510616 1510708 . - 0 ID=cds-LP088_RS07935;Parent=gene-LP088_RS07935;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_040591296.1;locus_tag=LP088_RS07935;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,1510616;transl_table=11 NZ_CP087814.1 RefSeq gene 1510917 1511921 . + . ID=gene-LP088_RS07940;Name=LP088_RS07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07940;old_locus_tag=LP088_07870 NZ_CP087814.1 GeneMarkS-2+ CDS 1510917 1511921 . + 0 ID=cds-WP_078273784.1;Parent=gene-LP088_RS07940;Dbxref=Genbank:WP_078273784.1;Name=WP_078273784.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS07940;product=hypothetical protein;protein_id=WP_078273784.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1512031 1513161 . + . ID=gene-LP088_RS07945;Name=LP088_RS07945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07945;old_locus_tag=LP088_07875 NZ_CP087814.1 Protein Homology CDS 1512031 1513161 . + 0 ID=cds-WP_158079626.1;Parent=gene-LP088_RS07945;Dbxref=Genbank:WP_158079626.1;Name=WP_158079626.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015679.2;locus_tag=LP088_RS07945;product=L%2CD-transpeptidase family protein;protein_id=WP_158079626.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1513247 1514644 . + . ID=gene-LP088_RS07950;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=LP088_RS07950;old_locus_tag=LP088_07880 NZ_CP087814.1 Protein Homology CDS 1513247 1514644 . + 0 ID=cds-WP_078273786.1;Parent=gene-LP088_RS07950;Dbxref=Genbank:WP_078273786.1;Name=WP_078273786.1;Ontology_term=GO:0006188,GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=IMP biosynthetic process|0006188||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003667962.1;locus_tag=LP088_RS07950;product=adenylosuccinate lyase;protein_id=WP_078273786.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1514706 1515644 . + . ID=gene-LP088_RS07955;Name=LP088_RS07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07955;old_locus_tag=LP088_07885 NZ_CP087814.1 Protein Homology CDS 1514706 1515644 . + 0 ID=cds-WP_112742358.1;Parent=gene-LP088_RS07955;Dbxref=Genbank:WP_112742358.1;Name=WP_112742358.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019313.2;locus_tag=LP088_RS07955;product=P-loop NTPase fold protein;protein_id=WP_112742358.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1515811 1516425 . + . ID=gene-LP088_RS07960;Name=LP088_RS07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07960;old_locus_tag=LP088_07890 NZ_CP087814.1 GeneMarkS-2+ CDS 1515811 1516425 . + 0 ID=cds-WP_078273787.1;Parent=gene-LP088_RS07960;Dbxref=Genbank:WP_078273787.1;Name=WP_078273787.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS07960;product=hypothetical protein;protein_id=WP_078273787.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1516481 1517122 . - . ID=gene-LP088_RS07965;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=LP088_RS07965;old_locus_tag=LP088_07895 NZ_CP087814.1 Protein Homology CDS 1516481 1517122 . - 0 ID=cds-WP_078273788.1;Parent=gene-LP088_RS07965;Dbxref=Genbank:WP_078273788.1;Name=WP_078273788.1;Ontology_term=GO:0009152,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196386.1;locus_tag=LP088_RS07965;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_078273788.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1517218 1517511 . - . ID=gene-LP088_RS07970;Name=LP088_RS07970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07970;old_locus_tag=LP088_07900 NZ_CP087814.1 GeneMarkS-2+ CDS 1517218 1517511 . - 0 ID=cds-WP_112742359.1;Parent=gene-LP088_RS07970;Dbxref=Genbank:WP_112742359.1;Name=WP_112742359.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS07970;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_112742359.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1517511 1517753 . - . ID=gene-LP088_RS07975;Name=LP088_RS07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07975;old_locus_tag=LP088_07905 NZ_CP087814.1 GeneMarkS-2+ CDS 1517511 1517753 . - 0 ID=cds-WP_078273790.1;Parent=gene-LP088_RS07975;Dbxref=Genbank:WP_078273790.1;Name=WP_078273790.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS07975;product=hypothetical protein;protein_id=WP_078273790.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1517789 1517986 . - . ID=gene-LP088_RS07980;Name=LP088_RS07980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07980;old_locus_tag=LP088_07910 NZ_CP087814.1 GeneMarkS-2+ CDS 1517789 1517986 . - 0 ID=cds-WP_078273791.1;Parent=gene-LP088_RS07980;Dbxref=Genbank:WP_078273791.1;Name=WP_078273791.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS07980;product=hypothetical protein;protein_id=WP_078273791.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1518063 1519106 . - . ID=gene-LP088_RS07985;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=LP088_RS07985;old_locus_tag=LP088_07915 NZ_CP087814.1 Protein Homology CDS 1518063 1519106 . - 0 ID=cds-WP_078273792.1;Parent=gene-LP088_RS07985;Dbxref=Genbank:WP_078273792.1;Name=WP_078273792.1;Ontology_term=GO:0006189,GO:0009152,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520133.1;locus_tag=LP088_RS07985;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_078273792.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1519258 1519334 . + . ID=gene-LP088_RS07990;Name=LP088_RS07990;gbkey=Gene;gene_biotype=tRNA;locus_tag=LP088_RS07990;old_locus_tag=LP088_07920 NZ_CP087814.1 tRNAscan-SE tRNA 1519258 1519334 . + . ID=rna-LP088_RS07990;Parent=gene-LP088_RS07990;anticodon=(pos:1519292..1519294);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS07990;product=tRNA-Ile NZ_CP087814.1 tRNAscan-SE exon 1519258 1519334 . + . ID=exon-LP088_RS07990-1;Parent=rna-LP088_RS07990;anticodon=(pos:1519292..1519294);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS07990;product=tRNA-Ile NZ_CP087814.1 RefSeq gene 1519476 1519775 . - . ID=gene-LP088_RS07995;Name=LP088_RS07995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS07995;old_locus_tag=LP088_07925 NZ_CP087814.1 GeneMarkS-2+ CDS 1519476 1519775 . - 0 ID=cds-WP_078273793.1;Parent=gene-LP088_RS07995;Dbxref=Genbank:WP_078273793.1;Name=WP_078273793.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS07995;product=hypothetical protein;protein_id=WP_078273793.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1519762 1520292 . - . ID=gene-LP088_RS08000;Name=LP088_RS08000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08000;old_locus_tag=LP088_07930 NZ_CP087814.1 Protein Homology CDS 1519762 1520292 . - 0 ID=cds-WP_264684451.1;Parent=gene-LP088_RS08000;Dbxref=Genbank:WP_264684451.1;Name=WP_264684451.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016343.2;locus_tag=LP088_RS08000;product=DUF551 domain-containing protein;protein_id=WP_264684451.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1520453 1520770 . - . ID=gene-LP088_RS08005;Name=LP088_RS08005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08005;old_locus_tag=LP088_07935 NZ_CP087814.1 GeneMarkS-2+ CDS 1520453 1520770 . - 0 ID=cds-WP_264684450.1;Parent=gene-LP088_RS08005;Dbxref=Genbank:WP_264684450.1;Name=WP_264684450.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS08005;product=nucleoporin Nup120/160;protein_id=WP_264684450.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1520767 1521264 . - . ID=gene-LP088_RS08010;Name=LP088_RS08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08010;old_locus_tag=LP088_07940 NZ_CP087814.1 GeneMarkS-2+ CDS 1520767 1521264 . - 0 ID=cds-WP_264684449.1;Parent=gene-LP088_RS08010;Dbxref=Genbank:WP_264684449.1;Name=WP_264684449.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS08010;product=hypothetical protein;protein_id=WP_264684449.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1521332 1521904 . - . ID=gene-LP088_RS08015;Name=LP088_RS08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08015;old_locus_tag=LP088_07945 NZ_CP087814.1 GeneMarkS-2+ CDS 1521332 1521904 . - 0 ID=cds-WP_264684448.1;Parent=gene-LP088_RS08015;Dbxref=Genbank:WP_264684448.1;Name=WP_264684448.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS08015;product=hypothetical protein;protein_id=WP_264684448.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 1522053 1522660 . - . ID=gene-LP088_RS08020;Name=ssb;gbkey=Gene;gene=ssb;gene_biotype=pseudogene;locus_tag=LP088_RS08020;old_locus_tag=LP088_07950;pseudo=true NZ_CP087814.1 Protein Homology CDS 1522053 1522660 . - 0 ID=cds-LP088_RS08020;Parent=gene-LP088_RS08020;Note=frameshifted;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0006351,GO:0003697;gbkey=CDS;gene=ssb;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000168322.1;locus_tag=LP088_RS08020;product=single-stranded DNA-binding protein;pseudo=true;transl_table=11 NZ_CP087814.1 RefSeq gene 1522660 1523295 . - . ID=gene-LP088_RS08025;Name=LP088_RS08025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08025;old_locus_tag=LP088_07955 NZ_CP087814.1 Protein Homology CDS 1522660 1523295 . - 0 ID=cds-WP_112742071.1-3;Parent=gene-LP088_RS08025;Dbxref=Genbank:WP_112742071.1;Name=WP_112742071.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021128.2;locus_tag=LP088_RS08025;product=YqaJ viral recombinase family protein;protein_id=WP_112742071.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1523292 1524047 . - . ID=gene-LP088_RS08030;Name=LP088_RS08030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08030;old_locus_tag=LP088_07960 NZ_CP087814.1 Protein Homology CDS 1523292 1524047 . - 0 ID=cds-WP_264676181.1-3;Parent=gene-LP088_RS08030;Dbxref=Genbank:WP_264676181.1;Name=WP_264676181.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016302.2;locus_tag=LP088_RS08030;product=ERF family protein;protein_id=WP_264676181.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1524044 1524238 . - . ID=gene-LP088_RS08035;Name=LP088_RS08035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08035;old_locus_tag=LP088_07965 NZ_CP087814.1 GeneMarkS-2+ CDS 1524044 1524238 . - 0 ID=cds-WP_264684447.1;Parent=gene-LP088_RS08035;Dbxref=Genbank:WP_264684447.1;Name=WP_264684447.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS08035;product=hypothetical protein;protein_id=WP_264684447.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1524235 1524423 . - . ID=gene-LP088_RS08040;Name=LP088_RS08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08040;old_locus_tag=LP088_07970 NZ_CP087814.1 GeneMarkS-2+ CDS 1524235 1524423 . - 0 ID=cds-WP_264684446.1;Parent=gene-LP088_RS08040;Dbxref=Genbank:WP_264684446.1;Name=WP_264684446.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS08040;product=hypothetical protein;protein_id=WP_264684446.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1524434 1524769 . - . ID=gene-LP088_RS08045;Name=LP088_RS08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08045;old_locus_tag=LP088_07975 NZ_CP087814.1 GeneMarkS-2+ CDS 1524434 1524769 . - 0 ID=cds-WP_264684445.1;Parent=gene-LP088_RS08045;Dbxref=Genbank:WP_264684445.1;Name=WP_264684445.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS08045;product=hypothetical protein;protein_id=WP_264684445.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1525136 1525204 . + . ID=gene-LP088_RS08050;Name=LP088_RS08050;gbkey=Gene;gene_biotype=tRNA;locus_tag=LP088_RS08050;old_locus_tag=LP088_07980 NZ_CP087814.1 tRNAscan-SE tRNA 1525136 1525204 . + . ID=rna-LP088_RS08050;Parent=gene-LP088_RS08050;anticodon=(pos:1525165..1525167);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS08050;product=tRNA-Met NZ_CP087814.1 tRNAscan-SE exon 1525136 1525204 . + . ID=exon-LP088_RS08050-1;Parent=rna-LP088_RS08050;anticodon=(pos:1525165..1525167);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS08050;product=tRNA-Met NZ_CP087814.1 RefSeq gene 1525563 1525637 . + . ID=gene-LP088_RS08055;Name=LP088_RS08055;gbkey=Gene;gene_biotype=tRNA;locus_tag=LP088_RS08055;old_locus_tag=LP088_07985 NZ_CP087814.1 tRNAscan-SE tRNA 1525563 1525637 . + . ID=rna-LP088_RS08055;Parent=gene-LP088_RS08055;anticodon=(pos:1525595..1525597);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS08055;product=tRNA-Cys NZ_CP087814.1 tRNAscan-SE exon 1525563 1525637 . + . ID=exon-LP088_RS08055-1;Parent=rna-LP088_RS08055;anticodon=(pos:1525595..1525597);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS08055;product=tRNA-Cys NZ_CP087814.1 RefSeq gene 1525763 1526071 . - . ID=gene-LP088_RS08060;Name=LP088_RS08060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08060;old_locus_tag=LP088_07990 NZ_CP087814.1 Protein Homology CDS 1525763 1526071 . - 0 ID=cds-WP_264684444.1;Parent=gene-LP088_RS08060;Dbxref=Genbank:WP_264684444.1;Name=WP_264684444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003671759.1;locus_tag=LP088_RS08060;product=hypothetical protein;protein_id=WP_264684444.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1526064 1526441 . - . ID=gene-LP088_RS08065;Name=LP088_RS08065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08065;old_locus_tag=LP088_07995 NZ_CP087814.1 Protein Homology CDS 1526064 1526441 . - 0 ID=cds-WP_264684443.1;Parent=gene-LP088_RS08065;Dbxref=Genbank:WP_264684443.1;Name=WP_264684443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003671763.1;locus_tag=LP088_RS08065;product=hypothetical protein;protein_id=WP_264684443.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1526505 1528616 . - . ID=gene-LP088_RS08070;Name=LP088_RS08070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08070;old_locus_tag=LP088_08000 NZ_CP087814.1 GeneMarkS-2+ CDS 1526505 1528616 . - 0 ID=cds-WP_264690295.1;Parent=gene-LP088_RS08070;Dbxref=Genbank:WP_264690295.1;Name=WP_264690295.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS08070;product=hypothetical protein;protein_id=WP_264690295.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1528616 1529827 . - . ID=gene-LP088_RS08075;Name=LP088_RS08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08075;old_locus_tag=LP088_08005 NZ_CP087814.1 GeneMarkS-2+ CDS 1528616 1529827 . - 0 ID=cds-WP_264690296.1;Parent=gene-LP088_RS08075;Dbxref=Genbank:WP_264690296.1;Name=WP_264690296.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS08075;product=hypothetical protein;protein_id=WP_264690296.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1529820 1532423 . - . ID=gene-LP088_RS08080;Name=LP088_RS08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08080;old_locus_tag=LP088_08010 NZ_CP087814.1 GeneMarkS-2+ CDS 1529820 1532423 . - 0 ID=cds-WP_264690297.1;Parent=gene-LP088_RS08080;Dbxref=Genbank:WP_264690297.1;Name=WP_264690297.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS08080;product=hypothetical protein;protein_id=WP_264690297.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1532425 1532925 . - . ID=gene-LP088_RS08085;Name=LP088_RS08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08085;old_locus_tag=LP088_08015 NZ_CP087814.1 Protein Homology CDS 1532425 1532925 . - 0 ID=cds-WP_264684439.1;Parent=gene-LP088_RS08085;Dbxref=Genbank:WP_264684439.1;Name=WP_264684439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004752436.1;locus_tag=LP088_RS08085;product=hypothetical protein;protein_id=WP_264684439.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1533000 1533158 . - . ID=gene-LP088_RS08090;Name=LP088_RS08090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08090;old_locus_tag=LP088_08020 NZ_CP087814.1 GeneMarkS-2+ CDS 1533000 1533158 . - 0 ID=cds-WP_264684438.1;Parent=gene-LP088_RS08090;Dbxref=Genbank:WP_264684438.1;Name=WP_264684438.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS08090;product=hypothetical protein;protein_id=WP_264684438.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1533209 1533691 . - . ID=gene-LP088_RS08095;Name=LP088_RS08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08095;old_locus_tag=LP088_08025 NZ_CP087814.1 GeneMarkS-2+ CDS 1533209 1533691 . - 0 ID=cds-WP_264684437.1;Parent=gene-LP088_RS08095;Dbxref=Genbank:WP_264684437.1;Name=WP_264684437.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS08095;product=hypothetical protein;protein_id=WP_264684437.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1533688 1533879 . - . ID=gene-LP088_RS08100;Name=LP088_RS08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08100;old_locus_tag=LP088_08030 NZ_CP087814.1 GeneMarkS-2+ CDS 1533688 1533879 . - 0 ID=cds-WP_264684436.1;Parent=gene-LP088_RS08100;Dbxref=Genbank:WP_264684436.1;Name=WP_264684436.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS08100;product=hypothetical protein;protein_id=WP_264684436.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1533860 1534048 . - . ID=gene-LP088_RS08105;Name=LP088_RS08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08105;old_locus_tag=LP088_08035 NZ_CP087814.1 GeneMarkS-2+ CDS 1533860 1534048 . - 0 ID=cds-WP_264684435.1;Parent=gene-LP088_RS08105;Dbxref=Genbank:WP_264684435.1;Name=WP_264684435.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS08105;product=hypothetical protein;protein_id=WP_264684435.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1534343 1534684 . - . ID=gene-LP088_RS08110;Name=LP088_RS08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08110;old_locus_tag=LP088_08040 NZ_CP087814.1 GeneMarkS-2+ CDS 1534343 1534684 . - 0 ID=cds-WP_264684434.1;Parent=gene-LP088_RS08110;Dbxref=Genbank:WP_264684434.1;Name=WP_264684434.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS08110;product=hypothetical protein;protein_id=WP_264684434.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1534693 1535016 . - . ID=gene-LP088_RS08115;Name=LP088_RS08115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08115;old_locus_tag=LP088_08045 NZ_CP087814.1 GeneMarkS-2+ CDS 1534693 1535016 . - 0 ID=cds-WP_264684433.1;Parent=gene-LP088_RS08115;Dbxref=Genbank:WP_264684433.1;Name=WP_264684433.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS08115;product=hypothetical protein;protein_id=WP_264684433.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1535029 1535358 . - . ID=gene-LP088_RS08120;Name=LP088_RS08120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08120;old_locus_tag=LP088_08050 NZ_CP087814.1 GeneMarkS-2+ CDS 1535029 1535358 . - 0 ID=cds-WP_264690298.1;Parent=gene-LP088_RS08120;Dbxref=Genbank:WP_264690298.1;Name=WP_264690298.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS08120;product=hypothetical protein;protein_id=WP_264690298.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1535300 1536049 . - . ID=gene-LP088_RS08125;Name=LP088_RS08125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08125;old_locus_tag=LP088_08055 NZ_CP087814.1 Protein Homology CDS 1535300 1536049 . - 0 ID=cds-WP_264684431.1;Parent=gene-LP088_RS08125;Dbxref=Genbank:WP_264684431.1;Name=WP_264684431.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012920.2;locus_tag=LP088_RS08125;product=helix-turn-helix transcriptional regulator;protein_id=WP_264684431.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1536225 1536428 . + . ID=gene-LP088_RS08130;Name=LP088_RS08130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08130;old_locus_tag=LP088_08060 NZ_CP087814.1 GeneMarkS-2+ CDS 1536225 1536428 . + 0 ID=cds-WP_264684430.1;Parent=gene-LP088_RS08130;Dbxref=Genbank:WP_264684430.1;Name=WP_264684430.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS08130;product=helix-turn-helix domain-containing protein;protein_id=WP_264684430.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1536464 1537102 . + . ID=gene-LP088_RS08135;Name=LP088_RS08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08135;old_locus_tag=LP088_08065 NZ_CP087814.1 GeneMarkS-2+ CDS 1536464 1537102 . + 0 ID=cds-WP_264684429.1;Parent=gene-LP088_RS08135;Dbxref=Genbank:WP_264684429.1;Name=WP_264684429.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS08135;product=hypothetical protein;protein_id=WP_264684429.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1537099 1538118 . + . ID=gene-LP088_RS08140;Name=LP088_RS08140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08140;old_locus_tag=LP088_08070 NZ_CP087814.1 Protein Homology CDS 1537099 1538118 . + 0 ID=cds-WP_264690299.1;Parent=gene-LP088_RS08140;Dbxref=Genbank:WP_264690299.1;Name=WP_264690299.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016381.2;locus_tag=LP088_RS08140;product=replication protein;protein_id=WP_264690299.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1538111 1538719 . + . ID=gene-LP088_RS08145;Name=LP088_RS08145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08145;old_locus_tag=LP088_08075 NZ_CP087814.1 GeneMarkS-2+ CDS 1538111 1538719 . + 0 ID=cds-WP_079326168.1;Parent=gene-LP088_RS08145;Dbxref=Genbank:WP_079326168.1;Name=WP_079326168.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS08145;product=hypothetical protein;protein_id=WP_079326168.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1538716 1539108 . + . ID=gene-LP088_RS08150;Name=LP088_RS08150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08150;old_locus_tag=LP088_08080 NZ_CP087814.1 Protein Homology CDS 1538716 1539108 . + 0 ID=cds-WP_115369748.1;Parent=gene-LP088_RS08150;Dbxref=Genbank:WP_115369748.1;Name=WP_115369748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519914.1;locus_tag=LP088_RS08150;product=VRR-NUC domain-containing protein;protein_id=WP_115369748.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1539105 1539608 . + . ID=gene-LP088_RS08155;Name=LP088_RS08155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08155;old_locus_tag=LP088_08085 NZ_CP087814.1 GeneMarkS-2+ CDS 1539105 1539608 . + 0 ID=cds-WP_079326170.1;Parent=gene-LP088_RS08155;Dbxref=Genbank:WP_079326170.1;Name=WP_079326170.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS08155;product=hypothetical protein;protein_id=WP_079326170.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1539639 1539899 . + . ID=gene-LP088_RS08160;Name=LP088_RS08160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08160;old_locus_tag=LP088_08090 NZ_CP087814.1 GeneMarkS-2+ CDS 1539639 1539899 . + 0 ID=cds-WP_264684427.1;Parent=gene-LP088_RS08160;Dbxref=Genbank:WP_264684427.1;Name=WP_264684427.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS08160;product=hypothetical protein;protein_id=WP_264684427.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1539921 1540211 . + . ID=gene-LP088_RS08165;Name=LP088_RS08165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08165;old_locus_tag=LP088_08095 NZ_CP087814.1 GeneMarkS-2+ CDS 1539921 1540211 . + 0 ID=cds-WP_112742084.1-3;Parent=gene-LP088_RS08165;Dbxref=Genbank:WP_112742084.1;Name=WP_112742084.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS08165;product=hypothetical protein;protein_id=WP_112742084.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1540208 1540693 . + . ID=gene-LP088_RS08170;Name=LP088_RS08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08170;old_locus_tag=LP088_08100 NZ_CP087814.1 Protein Homology CDS 1540208 1540693 . + 0 ID=cds-WP_264690300.1;Parent=gene-LP088_RS08170;Dbxref=Genbank:WP_264690300.1;Name=WP_264690300.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017578.2;locus_tag=LP088_RS08170;product=recombination protein NinB;protein_id=WP_264690300.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1540830 1540985 . + . ID=gene-LP088_RS08175;Name=LP088_RS08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08175;old_locus_tag=LP088_08105 NZ_CP087814.1 Protein Homology CDS 1540830 1540985 . + 0 ID=cds-WP_264684425.1;Parent=gene-LP088_RS08175;Dbxref=Genbank:WP_264684425.1;Name=WP_264684425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003660082.1;locus_tag=LP088_RS08175;product=hypothetical protein;protein_id=WP_264684425.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1541135 1541380 . + . ID=gene-LP088_RS08180;Name=LP088_RS08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08180;old_locus_tag=LP088_08110 NZ_CP087814.1 GeneMarkS-2+ CDS 1541135 1541380 . + 0 ID=cds-WP_264690301.1;Parent=gene-LP088_RS08180;Dbxref=Genbank:WP_264690301.1;Name=WP_264690301.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS08180;product=hypothetical protein;protein_id=WP_264690301.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1541473 1541670 . + . ID=gene-LP088_RS08185;Name=LP088_RS08185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08185;old_locus_tag=LP088_08115 NZ_CP087814.1 GeneMarkS-2+ CDS 1541473 1541670 . + 0 ID=cds-WP_078275332.1;Parent=gene-LP088_RS08185;Dbxref=Genbank:WP_078275332.1;Name=WP_078275332.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS08185;product=hypothetical protein;protein_id=WP_078275332.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1541674 1542126 . + . ID=gene-LP088_RS08190;Name=LP088_RS08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08190;old_locus_tag=LP088_08120 NZ_CP087814.1 Protein Homology CDS 1541674 1542126 . + 0 ID=cds-WP_078275333.1;Parent=gene-LP088_RS08190;Dbxref=Genbank:WP_078275333.1;Name=WP_078275333.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013490.2;locus_tag=LP088_RS08190;product=hypothetical protein;protein_id=WP_078275333.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1542175 1542615 . + . ID=gene-LP088_RS08195;Name=LP088_RS08195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08195;old_locus_tag=LP088_08125 NZ_CP087814.1 GeneMarkS-2+ CDS 1542175 1542615 . + 0 ID=cds-WP_078275334.1;Parent=gene-LP088_RS08195;Dbxref=Genbank:WP_078275334.1;Name=WP_078275334.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS08195;product=hypothetical protein;protein_id=WP_078275334.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1542709 1543410 . - . ID=gene-LP088_RS08200;Name=LP088_RS08200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08200;old_locus_tag=LP088_08130 NZ_CP087814.1 Protein Homology CDS 1542709 1543410 . - 0 ID=cds-WP_264690303.1;Parent=gene-LP088_RS08200;Dbxref=Genbank:WP_264690303.1;Name=WP_264690303.1;Ontology_term=GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;inference=COORDINATES: protein motif:HMM:NF024929.2;locus_tag=LP088_RS08200;product=M15 family metallopeptidase;protein_id=WP_264690303.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1543412 1545739 . - . ID=gene-LP088_RS08205;Name=LP088_RS08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08205;old_locus_tag=LP088_08135 NZ_CP087814.1 Protein Homology CDS 1543412 1545739 . - 0 ID=cds-WP_264690304.1;Parent=gene-LP088_RS08205;Dbxref=Genbank:WP_264690304.1;Name=WP_264690304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004761381.1;locus_tag=LP088_RS08205;product=hypothetical protein;protein_id=WP_264690304.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1545749 1546432 . - . ID=gene-LP088_RS08210;Name=LP088_RS08210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08210;old_locus_tag=LP088_08140 NZ_CP087814.1 Protein Homology CDS 1545749 1546432 . - 0 ID=cds-WP_264684420.1;Parent=gene-LP088_RS08210;Dbxref=Genbank:WP_264684420.1;Name=WP_264684420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004761371.1;locus_tag=LP088_RS08210;product=hypothetical protein;protein_id=WP_264684420.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1546442 1546729 . - . ID=gene-LP088_RS08215;Name=LP088_RS08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08215;old_locus_tag=LP088_08145 NZ_CP087814.1 GeneMarkS-2+ CDS 1546442 1546729 . - 0 ID=cds-WP_264684419.1;Parent=gene-LP088_RS08215;Dbxref=Genbank:WP_264684419.1;Name=WP_264684419.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS08215;product=hypothetical protein;protein_id=WP_264684419.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1546745 1547152 . - . ID=gene-LP088_RS08220;Name=LP088_RS08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08220;old_locus_tag=LP088_08150 NZ_CP087814.1 GeneMarkS-2+ CDS 1546745 1547152 . - 0 ID=cds-WP_264690305.1;Parent=gene-LP088_RS08220;Dbxref=Genbank:WP_264690305.1;Name=WP_264690305.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS08220;product=hypothetical protein;protein_id=WP_264690305.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1547218 1547691 . - . ID=gene-LP088_RS08225;Name=LP088_RS08225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08225;old_locus_tag=LP088_08155 NZ_CP087814.1 GeneMarkS-2+ CDS 1547218 1547691 . - 0 ID=cds-WP_264690306.1;Parent=gene-LP088_RS08225;Dbxref=Genbank:WP_264690306.1;Name=WP_264690306.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS08225;product=hypothetical protein;protein_id=WP_264690306.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1547742 1549034 . - . ID=gene-LP088_RS08230;Name=LP088_RS08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08230;old_locus_tag=LP088_08160 NZ_CP087814.1 Protein Homology CDS 1547742 1549034 . - 0 ID=cds-WP_264690307.1;Parent=gene-LP088_RS08230;Dbxref=Genbank:WP_264690307.1;Name=WP_264690307.1;Ontology_term=GO:0019028;gbkey=CDS;go_component=viral capsid|0019028||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005203087.1;locus_tag=LP088_RS08230;product=N4-gp56 family major capsid protein;protein_id=WP_264690307.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1549057 1549905 . - . ID=gene-LP088_RS08235;Name=LP088_RS08235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08235;old_locus_tag=LP088_08165 NZ_CP087814.1 GeneMarkS-2+ CDS 1549057 1549905 . - 0 ID=cds-WP_264690308.1;Parent=gene-LP088_RS08235;Dbxref=Genbank:WP_264690308.1;Name=WP_264690308.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS08235;product=hypothetical protein;protein_id=WP_264690308.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1549985 1551184 . - . ID=gene-LP088_RS08240;Name=LP088_RS08240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08240;old_locus_tag=LP088_08170 NZ_CP087814.1 GeneMarkS-2+ CDS 1549985 1551184 . - 0 ID=cds-WP_264690309.1;Parent=gene-LP088_RS08240;Dbxref=Genbank:WP_264690309.1;Name=WP_264690309.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS08240;product=hypothetical protein;protein_id=WP_264690309.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1551185 1554484 . - . ID=gene-LP088_RS08245;Name=LP088_RS08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08245;old_locus_tag=LP088_08175 NZ_CP087814.1 GeneMarkS-2+ CDS 1551185 1554484 . - 0 ID=cds-WP_078275335.1;Parent=gene-LP088_RS08245;Dbxref=Genbank:WP_078275335.1;Name=WP_078275335.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS08245;product=hypothetical protein;protein_id=WP_078275335.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1554481 1555698 . - . ID=gene-LP088_RS08250;Name=LP088_RS08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08250;old_locus_tag=LP088_08180 NZ_CP087814.1 GeneMarkS-2+ CDS 1554481 1555698 . - 0 ID=cds-WP_264690310.1;Parent=gene-LP088_RS08250;Dbxref=Genbank:WP_264690310.1;Name=WP_264690310.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS08250;product=hypothetical protein;protein_id=WP_264690310.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1555695 1556030 . - . ID=gene-LP088_RS08255;Name=LP088_RS08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08255;old_locus_tag=LP088_08185 NZ_CP087814.1 GeneMarkS-2+ CDS 1555695 1556030 . - 0 ID=cds-WP_078275337.1;Parent=gene-LP088_RS08255;Dbxref=Genbank:WP_078275337.1;Name=WP_078275337.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS08255;product=hypothetical protein;protein_id=WP_078275337.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1556047 1556454 . - . ID=gene-LP088_RS08260;Name=LP088_RS08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08260;old_locus_tag=LP088_08190 NZ_CP087814.1 Protein Homology CDS 1556047 1556454 . - 0 ID=cds-WP_078275338.1;Parent=gene-LP088_RS08260;Dbxref=Genbank:WP_078275338.1;Name=WP_078275338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015975452.1;locus_tag=LP088_RS08260;product=hypothetical protein;protein_id=WP_078275338.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1556538 1558184 . - . ID=gene-LP088_RS08265;Name=LP088_RS08265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08265;old_locus_tag=LP088_08195 NZ_CP087814.1 Protein Homology CDS 1556538 1558184 . - 0 ID=cds-WP_244893701.1;Parent=gene-LP088_RS08265;Dbxref=Genbank:WP_244893701.1;Name=WP_244893701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005215608.1;locus_tag=LP088_RS08265;product=terminase;protein_id=WP_244893701.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1558162 1558812 . - . ID=gene-LP088_RS08270;Name=LP088_RS08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08270;old_locus_tag=LP088_08200 NZ_CP087814.1 Protein Homology CDS 1558162 1558812 . - 0 ID=cds-WP_264690311.1;Parent=gene-LP088_RS08270;Dbxref=Genbank:WP_264690311.1;Name=WP_264690311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005221905.1;locus_tag=LP088_RS08270;product=hypothetical protein;protein_id=WP_264690311.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1558917 1574231 . - . ID=gene-LP088_RS08275;Name=LP088_RS08275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08275;old_locus_tag=LP088_08205 NZ_CP087814.1 Protein Homology CDS 1558917 1574231 . - 0 ID=cds-WP_264690312.1;Parent=gene-LP088_RS08275;Dbxref=Genbank:WP_264690312.1;Name=WP_264690312.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF032893.0;locus_tag=LP088_RS08275;product=PLxRFG domain-containing protein;protein_id=WP_264690312.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1574233 1575810 . - . ID=gene-LP088_RS08280;Name=LP088_RS08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08280;old_locus_tag=LP088_08210 NZ_CP087814.1 GeneMarkS-2+ CDS 1574233 1575810 . - 0 ID=cds-WP_264684406.1;Parent=gene-LP088_RS08280;Dbxref=Genbank:WP_264684406.1;Name=WP_264684406.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS08280;product=hypothetical protein;protein_id=WP_264684406.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1575935 1577221 . - . ID=gene-LP088_RS08285;Name=LP088_RS08285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08285;old_locus_tag=LP088_08215 NZ_CP087814.1 Protein Homology CDS 1575935 1577221 . - 0 ID=cds-WP_264684405.1;Parent=gene-LP088_RS08285;Dbxref=Genbank:WP_264684405.1;Name=WP_264684405.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012798.2;locus_tag=LP088_RS08285;product=integrase family protein;protein_id=WP_264684405.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1577729 1580302 . - . ID=gene-LP088_RS08290;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=LP088_RS08290;old_locus_tag=LP088_08220 NZ_CP087814.1 Protein Homology CDS 1577729 1580302 . - 0 ID=cds-WP_264675884.1;Parent=gene-LP088_RS08290;Dbxref=Genbank:WP_264675884.1;Name=WP_264675884.1;Ontology_term=GO:0006457,GO:0016887;gbkey=CDS;gene=clpB;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001210049.1;locus_tag=LP088_RS08290;product=ATP-dependent chaperone ClpB;protein_id=WP_264675884.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1580573 1581127 . + . ID=gene-LP088_RS08295;Name=LP088_RS08295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08295;old_locus_tag=LP088_08225 NZ_CP087814.1 Protein Homology CDS 1580573 1581127 . + 0 ID=cds-WP_112742361.1;Parent=gene-LP088_RS08295;Dbxref=Genbank:WP_112742361.1;Name=WP_112742361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009502103.1;locus_tag=LP088_RS08295;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_112742361.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1581539 1581901 . + . ID=gene-LP088_RS08300;Name=LP088_RS08300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08300;old_locus_tag=LP088_08230 NZ_CP087814.1 Protein Homology CDS 1581539 1581901 . + 0 ID=cds-WP_029103970.1;Parent=gene-LP088_RS08300;Dbxref=Genbank:WP_029103970.1;Name=WP_029103970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520838.1;locus_tag=LP088_RS08300;product=roadblock/LC7 domain-containing protein;protein_id=WP_029103970.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1581948 1582436 . + . ID=gene-LP088_RS08305;Name=LP088_RS08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08305;old_locus_tag=LP088_08235 NZ_CP087814.1 Protein Homology CDS 1581948 1582436 . + 0 ID=cds-WP_228144924.1;Parent=gene-LP088_RS08305;Dbxref=Genbank:WP_228144924.1;Name=WP_228144924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009501612.1;locus_tag=LP088_RS08305;product=PAS domain-containing protein;protein_id=WP_228144924.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1582436 1583182 . + . ID=gene-LP088_RS08310;Name=LP088_RS08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08310;old_locus_tag=LP088_08240 NZ_CP087814.1 Protein Homology CDS 1582436 1583182 . + 0 ID=cds-WP_115370064.1;Parent=gene-LP088_RS08310;Dbxref=Genbank:WP_115370064.1;Name=WP_115370064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520836.1;locus_tag=LP088_RS08310;product=phosphate/phosphite/phosphonate ABC transporter substrate-binding protein;protein_id=WP_115370064.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1583249 1583848 . + . ID=gene-LP088_RS08315;Name=LP088_RS08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08315;old_locus_tag=LP088_08245 NZ_CP087814.1 GeneMarkS-2+ CDS 1583249 1583848 . + 0 ID=cds-WP_115370065.1;Parent=gene-LP088_RS08315;Dbxref=Genbank:WP_115370065.1;Name=WP_115370065.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS08315;product=hypothetical protein;protein_id=WP_115370065.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1583944 1585227 . + . ID=gene-LP088_RS08320;Name=LP088_RS08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08320;old_locus_tag=LP088_08250 NZ_CP087814.1 GeneMarkS-2+ CDS 1583944 1585227 . + 0 ID=cds-WP_112742363.1;Parent=gene-LP088_RS08320;Dbxref=Genbank:WP_112742363.1;Name=WP_112742363.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS08320;product=hypothetical protein;protein_id=WP_112742363.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1585259 1585807 . + . ID=gene-LP088_RS08325;Name=LP088_RS08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08325;old_locus_tag=LP088_08255 NZ_CP087814.1 Protein Homology CDS 1585259 1585807 . + 0 ID=cds-WP_078275352.1;Parent=gene-LP088_RS08325;Dbxref=Genbank:WP_078275352.1;Name=WP_078275352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520833.1;locus_tag=LP088_RS08325;product=ATP/GTP-binding protein;protein_id=WP_078275352.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1585830 1586456 . + . ID=gene-LP088_RS08330;Name=LP088_RS08330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08330;old_locus_tag=LP088_08260 NZ_CP087814.1 Protein Homology CDS 1585830 1586456 . + 0 ID=cds-WP_112742364.1;Parent=gene-LP088_RS08330;Dbxref=Genbank:WP_112742364.1;Name=WP_112742364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201030.1;locus_tag=LP088_RS08330;product=hypothetical protein;protein_id=WP_112742364.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 1586644 1587613 . + . ID=gene-LP088_RS08335;Name=LP088_RS08335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS08335;old_locus_tag=LP088_08265;pseudo=true NZ_CP087814.1 Protein Homology CDS 1586644 1587613 . + 0 ID=cds-LP088_RS08335;Parent=gene-LP088_RS08335;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003670128.1;locus_tag=LP088_RS08335;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11 NZ_CP087814.1 RefSeq gene 1587905 1588834 . + . ID=gene-LP088_RS08340;Name=LP088_RS08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08340;old_locus_tag=LP088_08270 NZ_CP087814.1 Protein Homology CDS 1587905 1588834 . + 0 ID=cds-WP_078275354.1;Parent=gene-LP088_RS08340;Dbxref=Genbank:WP_078275354.1;Name=WP_078275354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011960930.1;locus_tag=LP088_RS08340;product=ABC transporter permease;protein_id=WP_078275354.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1588831 1589625 . + . ID=gene-LP088_RS08345;Name=LP088_RS08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08345;old_locus_tag=LP088_08275 NZ_CP087814.1 Protein Homology CDS 1588831 1589625 . + 0 ID=cds-WP_115370067.1;Parent=gene-LP088_RS08345;Dbxref=Genbank:WP_115370067.1;Name=WP_115370067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003665643.1;locus_tag=LP088_RS08345;product=ABC transporter ATP-binding protein;protein_id=WP_115370067.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 1589697 1590523 . + . ID=gene-LP088_RS08350;Name=LP088_RS08350;end_range=1590523,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS08350;old_locus_tag=LP088_08280;partial=true;pseudo=true NZ_CP087814.1 Protein Homology CDS 1589697 1590523 . + 0 ID=cds-LP088_RS08350;Parent=gene-LP088_RS08350;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=1590523,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_182073071.1;locus_tag=LP088_RS08350;partial=true;product=IS630 family transposase;pseudo=true;transl_table=11 NZ_CP087814.1 RefSeq gene 1590765 1591622 . + . ID=gene-LP088_RS08355;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=LP088_RS08355;old_locus_tag=LP088_08285 NZ_CP087814.1 Protein Homology CDS 1590765 1591622 . + 0 ID=cds-WP_264690313.1;Parent=gene-LP088_RS08355;Dbxref=Genbank:WP_264690313.1;Name=WP_264690313.1;Ontology_term=GO:0009152,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019768007.1;locus_tag=LP088_RS08355;product=formyltetrahydrofolate deformylase;protein_id=WP_264690313.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1591696 1592127 . - . ID=gene-LP088_RS08360;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=LP088_RS08360;old_locus_tag=LP088_08290 NZ_CP087814.1 Protein Homology CDS 1591696 1592127 . - 0 ID=cds-WP_078274598.1;Parent=gene-LP088_RS08360;Dbxref=Genbank:WP_078274598.1;Name=WP_078274598.1;Ontology_term=GO:0006165,GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;go_process=nucleoside diphosphate phosphorylation|0006165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000963851.1;locus_tag=LP088_RS08360;product=nucleoside-diphosphate kinase;protein_id=WP_078274598.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1592309 1594501 . - . ID=gene-LP088_RS08365;Name=LP088_RS08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08365;old_locus_tag=LP088_08295 NZ_CP087814.1 Protein Homology CDS 1592309 1594501 . - 0 ID=cds-WP_078274607.1;Parent=gene-LP088_RS08365;Dbxref=Genbank:WP_078274607.1;Name=WP_078274607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003656482.1;locus_tag=LP088_RS08365;product=carboxy terminal-processing peptidase;protein_id=WP_078274607.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1594657 1595721 . + . ID=gene-LP088_RS08370;Name=nagZ;gbkey=Gene;gene=nagZ;gene_biotype=protein_coding;locus_tag=LP088_RS08370;old_locus_tag=LP088_08300 NZ_CP087814.1 Protein Homology CDS 1594657 1595721 . + 0 ID=cds-WP_078274597.1;Parent=gene-LP088_RS08370;Dbxref=Genbank:WP_078274597.1;Name=WP_078274597.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=nagZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011959603.1;locus_tag=LP088_RS08370;product=beta-N-acetylhexosaminidase;protein_id=WP_078274597.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1595964 1596674 . - . ID=gene-LP088_RS08375;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=LP088_RS08375;old_locus_tag=LP088_08305 NZ_CP087814.1 Protein Homology CDS 1595964 1596674 . - 0 ID=cds-WP_078274596.1;Parent=gene-LP088_RS08375;Dbxref=Genbank:WP_078274596.1;Name=WP_078274596.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513996.1;locus_tag=LP088_RS08375;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_078274596.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1596699 1597097 . - . ID=gene-LP088_RS08380;Name=LP088_RS08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08380;old_locus_tag=LP088_08310 NZ_CP087814.1 Protein Homology CDS 1596699 1597097 . - 0 ID=cds-WP_078274595.1;Parent=gene-LP088_RS08380;Dbxref=Genbank:WP_078274595.1;Name=WP_078274595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011960213.1;locus_tag=LP088_RS08380;product=LapA family protein;protein_id=WP_078274595.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1597106 1597444 . - . ID=gene-LP088_RS08385;Name=LP088_RS08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08385;old_locus_tag=LP088_08315 NZ_CP087814.1 Protein Homology CDS 1597106 1597444 . - 0 ID=cds-WP_078274594.1;Parent=gene-LP088_RS08385;Dbxref=Genbank:WP_078274594.1;Name=WP_078274594.1;Ontology_term=GO:0006310,GO:0006355,GO:0003677,GO:0005694;gbkey=CDS;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011960808.1;locus_tag=LP088_RS08385;product=integration host factor subunit beta;protein_id=WP_078274594.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1597629 1599302 . - . ID=gene-LP088_RS08390;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=LP088_RS08390;old_locus_tag=LP088_08320 NZ_CP087814.1 Protein Homology CDS 1597629 1599302 . - 0 ID=cds-WP_112742371.1;Parent=gene-LP088_RS08390;Dbxref=Genbank:WP_112742371.1;Name=WP_112742371.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsA;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004995230.1;locus_tag=LP088_RS08390;product=30S ribosomal protein S1;protein_id=WP_112742371.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1599460 1600164 . - . ID=gene-LP088_RS08395;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=LP088_RS08395;old_locus_tag=LP088_08325 NZ_CP087814.1 Protein Homology CDS 1599460 1600164 . - 0 ID=cds-WP_078274592.1;Parent=gene-LP088_RS08395;Dbxref=Genbank:WP_078274592.1;Name=WP_078274592.1;Ontology_term=GO:0015949,GO:0004127;gbkey=CDS;gene=cmk;go_function=cytidylate kinase activity|0004127||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003673097.1;locus_tag=LP088_RS08395;product=(d)CMP kinase;protein_id=WP_078274592.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1600522 1601004 . - . ID=gene-LP088_RS08400;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=LP088_RS08400;old_locus_tag=LP088_08330 NZ_CP087814.1 Protein Homology CDS 1600522 1601004 . - 0 ID=cds-WP_228157846.1;Parent=gene-LP088_RS08400;Dbxref=Genbank:WP_228157846.1;Name=WP_228157846.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013107901.1;locus_tag=LP088_RS08400;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_228157846.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1601091 1601807 . - . ID=gene-LP088_RS08405;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=LP088_RS08405;old_locus_tag=LP088_08335 NZ_CP087814.1 Protein Homology CDS 1601091 1601807 . - 0 ID=cds-WP_078274591.1;Parent=gene-LP088_RS08405;Dbxref=Genbank:WP_078274591.1;Name=WP_078274591.1;Ontology_term=GO:0006284,GO:0004844,GO:0016799;gbkey=CDS;gene=ung;go_function=uracil DNA N-glycosylase activity|0004844||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007115680.1;locus_tag=LP088_RS08405;product=uracil-DNA glycosylase;protein_id=WP_078274591.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1601948 1602907 . - . ID=gene-LP088_RS08410;Name=LP088_RS08410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08410;old_locus_tag=LP088_08340 NZ_CP087814.1 Protein Homology CDS 1601948 1602907 . - 0 ID=cds-WP_078274590.1;Parent=gene-LP088_RS08410;Dbxref=Genbank:WP_078274590.1;Name=WP_078274590.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018028.2;locus_tag=LP088_RS08410;product=RDD family protein;protein_id=WP_078274590.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1603077 1604297 . + . ID=gene-LP088_RS08415;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=LP088_RS08415;old_locus_tag=LP088_08345 NZ_CP087814.1 Protein Homology CDS 1603077 1604297 . + 0 ID=cds-WP_078274589.1;Parent=gene-LP088_RS08415;Dbxref=Genbank:WP_078274589.1;Name=WP_078274589.1;Ontology_term=GO:0006824,GO:0015693,GO:0015087,GO:0015095;gbkey=CDS;gene=corA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA,magnesium ion transmembrane transporter activity|0015095||IEA;go_process=cobalt ion transport|0006824||IEA,magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009501912.1;locus_tag=LP088_RS08415;product=magnesium/cobalt transporter CorA;protein_id=WP_078274589.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1604540 1606714 . + . ID=gene-LP088_RS08420;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=LP088_RS08420;old_locus_tag=LP088_08350 NZ_CP087814.1 Protein Homology CDS 1604540 1606714 . + 0 ID=cds-WP_264675885.1;Parent=gene-LP088_RS08420;Dbxref=Genbank:WP_264675885.1;Name=WP_264675885.1;Ontology_term=GO:0006269,GO:0003896;gbkey=CDS;gene=dnaG;go_function=DNA primase activity|0003896||IEA;go_process=DNA replication%2C synthesis of RNA primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003671271.1;locus_tag=LP088_RS08420;product=DNA primase;protein_id=WP_264675885.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1606711 1607664 . - . ID=gene-LP088_RS08425;Name=LP088_RS08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08425;old_locus_tag=LP088_08355 NZ_CP087814.1 Protein Homology CDS 1606711 1607664 . - 0 ID=cds-WP_264676335.1;Parent=gene-LP088_RS08425;Dbxref=Genbank:WP_264676335.1;Name=WP_264676335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443355.1;locus_tag=LP088_RS08425;product=AEC family transporter;protein_id=WP_264676335.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1607756 1608259 . - . ID=gene-LP088_RS08430;Name=LP088_RS08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08430;old_locus_tag=LP088_08360 NZ_CP087814.1 GeneMarkS-2+ CDS 1607756 1608259 . - 0 ID=cds-WP_078274587.1;Parent=gene-LP088_RS08430;Dbxref=Genbank:WP_078274587.1;Name=WP_078274587.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS08430;product=hypothetical protein;protein_id=WP_078274587.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1608300 1608824 . - . ID=gene-LP088_RS08435;Name=LP088_RS08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08435;old_locus_tag=LP088_08365 NZ_CP087814.1 Protein Homology CDS 1608300 1608824 . - 0 ID=cds-WP_158079672.1;Parent=gene-LP088_RS08435;Dbxref=Genbank:WP_158079672.1;Name=WP_158079672.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR02452.1;locus_tag=LP088_RS08435;product=TIGR02452 family protein;protein_id=WP_158079672.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1608821 1609135 . - . ID=gene-LP088_RS08440;Name=LP088_RS08440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08440;old_locus_tag=LP088_08370 NZ_CP087814.1 GeneMarkS-2+ CDS 1608821 1609135 . - 0 ID=cds-WP_167398746.1;Parent=gene-LP088_RS08440;Dbxref=Genbank:WP_167398746.1;Name=WP_167398746.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS08440;product=hypothetical protein;protein_id=WP_167398746.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1609231 1609620 . - . ID=gene-LP088_RS08445;Name=LP088_RS08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08445;old_locus_tag=LP088_08375 NZ_CP087814.1 GeneMarkS-2+ CDS 1609231 1609620 . - 0 ID=cds-WP_143821698.1;Parent=gene-LP088_RS08445;Dbxref=Genbank:WP_143821698.1;Name=WP_143821698.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS08445;product=hypothetical protein;protein_id=WP_143821698.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1609704 1611599 . - . ID=gene-LP088_RS08450;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=LP088_RS08450;old_locus_tag=LP088_08380 NZ_CP087814.1 Protein Homology CDS 1609704 1611599 . - 0 ID=cds-WP_078274603.1;Parent=gene-LP088_RS08450;Dbxref=Genbank:WP_078274603.1;Name=WP_078274603.1;Ontology_term=GO:0002098,GO:0008033,GO:0050660;gbkey=CDS;gene=mnmG;go_function=flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009501660.1;locus_tag=LP088_RS08450;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_078274603.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1611813 1612745 . - . ID=gene-LP088_RS08455;Name=LP088_RS08455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08455;old_locus_tag=LP088_08385 NZ_CP087814.1 Protein Homology CDS 1611813 1612745 . - 0 ID=cds-WP_264675886.1;Parent=gene-LP088_RS08455;Dbxref=Genbank:WP_264675886.1;Name=WP_264675886.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026253.2;locus_tag=LP088_RS08455;product=WG repeat-containing protein;protein_id=WP_264675886.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1612786 1613136 . - . ID=gene-LP088_RS08460;Name=LP088_RS08460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08460;old_locus_tag=LP088_08390 NZ_CP087814.1 Protein Homology CDS 1612786 1613136 . - 0 ID=cds-WP_078274583.1;Parent=gene-LP088_RS08460;Dbxref=Genbank:WP_078274583.1;Name=WP_078274583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003659312.1;locus_tag=LP088_RS08460;product=hypothetical protein;protein_id=WP_078274583.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1613133 1613480 . - . ID=gene-LP088_RS08465;Name=LP088_RS08465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08465;old_locus_tag=LP088_08395 NZ_CP087814.1 GeneMarkS-2+ CDS 1613133 1613480 . - 0 ID=cds-WP_078274582.1;Parent=gene-LP088_RS08465;Dbxref=Genbank:WP_078274582.1;Name=WP_078274582.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS08465;product=hypothetical protein;protein_id=WP_078274582.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1613555 1613890 . - . ID=gene-LP088_RS08470;Name=grxD;gbkey=Gene;gene=grxD;gene_biotype=protein_coding;locus_tag=LP088_RS08470;old_locus_tag=LP088_08400 NZ_CP087814.1 Protein Homology CDS 1613555 1613890 . - 0 ID=cds-WP_036362211.1;Parent=gene-LP088_RS08470;Dbxref=Genbank:WP_036362211.1;Name=WP_036362211.1;Ontology_term=GO:0009055;gbkey=CDS;gene=grxD;go_function=electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003660650.1;locus_tag=LP088_RS08470;product=Grx4 family monothiol glutaredoxin;protein_id=WP_036362211.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1613944 1614510 . - . ID=gene-LP088_RS08475;Name=LP088_RS08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08475;old_locus_tag=LP088_08405 NZ_CP087814.1 Protein Homology CDS 1613944 1614510 . - 0 ID=cds-WP_112742376.1;Parent=gene-LP088_RS08475;Dbxref=Genbank:WP_112742376.1;Name=WP_112742376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003667968.1;locus_tag=LP088_RS08475;product=cysteine hydrolase;protein_id=WP_112742376.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1614558 1615037 . - . ID=gene-LP088_RS08480;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=LP088_RS08480;old_locus_tag=LP088_08410 NZ_CP087814.1 Protein Homology CDS 1614558 1615037 . - 0 ID=cds-WP_112742825.1;Parent=gene-LP088_RS08480;Dbxref=Genbank:WP_112742825.1;Name=WP_112742825.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000488386.1;locus_tag=LP088_RS08480;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_112742825.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1615158 1616300 . + . ID=gene-LP088_RS08485;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=LP088_RS08485;old_locus_tag=LP088_08415 NZ_CP087814.1 Protein Homology CDS 1615158 1616300 . + 0 ID=cds-WP_112742377.1;Parent=gene-LP088_RS08485;Dbxref=Genbank:WP_112742377.1;Name=WP_112742377.1;Ontology_term=GO:0008033,GO:0016740,GO:0016783;gbkey=CDS;gene=mnmA;go_function=transferase activity|0016740||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003660653.1;locus_tag=LP088_RS08485;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_112742377.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1616312 1616695 . + . ID=gene-LP088_RS08490;Name=LP088_RS08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08490;old_locus_tag=LP088_08420 NZ_CP087814.1 Protein Homology CDS 1616312 1616695 . + 0 ID=cds-WP_115005207.1;Parent=gene-LP088_RS08490;Dbxref=Genbank:WP_115005207.1;Name=WP_115005207.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017470.2;locus_tag=LP088_RS08490;product=DUF805 domain-containing protein;protein_id=WP_115005207.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1616884 1617783 . - . ID=gene-LP088_RS08495;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=LP088_RS08495;old_locus_tag=LP088_08425 NZ_CP087814.1 Protein Homology CDS 1616884 1617783 . - 0 ID=cds-WP_112742379.1;Parent=gene-LP088_RS08495;Dbxref=Genbank:WP_112742379.1;Name=WP_112742379.1;Ontology_term=GO:0006744,GO:0008412;gbkey=CDS;gene=ubiA;go_function=4-hydroxybenzoate octaprenyltransferase activity|0008412||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520747.1;locus_tag=LP088_RS08495;product=4-hydroxybenzoate octaprenyltransferase;protein_id=WP_112742379.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1617970 1619286 . + . ID=gene-LP088_RS08500;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=LP088_RS08500;old_locus_tag=LP088_08430 NZ_CP087814.1 Protein Homology CDS 1617970 1619286 . + 0 ID=cds-WP_112742826.1;Parent=gene-LP088_RS08500;Dbxref=Genbank:WP_112742826.1;Name=WP_112742826.1;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010195944.1;locus_tag=LP088_RS08500;product=diaminopimelate decarboxylase;protein_id=WP_112742826.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1619492 1620196 . + . ID=gene-LP088_RS08505;Name=LP088_RS08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08505;old_locus_tag=LP088_08435 NZ_CP087814.1 GeneMarkS-2+ CDS 1619492 1620196 . + 0 ID=cds-WP_112742380.1;Parent=gene-LP088_RS08505;Dbxref=Genbank:WP_112742380.1;Name=WP_112742380.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS08505;product=hypothetical protein;protein_id=WP_112742380.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1620280 1621161 . + . ID=gene-LP088_RS08510;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=LP088_RS08510;old_locus_tag=LP088_08440 NZ_CP087814.1 Protein Homology CDS 1620280 1621161 . + 0 ID=cds-WP_112742381.1;Parent=gene-LP088_RS08510;Dbxref=Genbank:WP_112742381.1;Name=WP_112742381.1;Ontology_term=GO:0008168;gbkey=CDS;gene=ubiE;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019518519.1;locus_tag=LP088_RS08510;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=WP_112742381.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1621368 1622999 . + . ID=gene-LP088_RS08515;Name=LP088_RS08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08515;old_locus_tag=LP088_08445 NZ_CP087814.1 Protein Homology CDS 1621368 1622999 . + 0 ID=cds-WP_112742827.1;Parent=gene-LP088_RS08515;Dbxref=Genbank:WP_112742827.1;Name=WP_112742827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199302.1;locus_tag=LP088_RS08515;product=AarF/UbiB family protein;protein_id=WP_112742827.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1623327 1625081 . + . ID=gene-LP088_RS08520;Name=LP088_RS08520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08520;old_locus_tag=LP088_08450 NZ_CP087814.1 Protein Homology CDS 1623327 1625081 . + 0 ID=cds-WP_078274573.1;Parent=gene-LP088_RS08520;Dbxref=Genbank:WP_078274573.1;Name=WP_078274573.1;Ontology_term=GO:0006425,GO:0000166,GO:0004819,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,glutamine-tRNA ligase activity|0004819||IEA,ATP binding|0005524||IEA;go_process=glutaminyl-tRNA aminoacylation|0006425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003659397.1;locus_tag=LP088_RS08520;product=glutamine--tRNA ligase/YqeY domain fusion protein;protein_id=WP_078274573.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1625161 1625544 . - . ID=gene-LP088_RS08525;Name=LP088_RS08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08525;old_locus_tag=LP088_08455 NZ_CP087814.1 GeneMarkS-2+ CDS 1625161 1625544 . - 0 ID=cds-WP_208624036.1;Parent=gene-LP088_RS08525;Dbxref=Genbank:WP_208624036.1;Name=WP_208624036.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS08525;product=hemerythrin domain-containing protein;protein_id=WP_208624036.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1625683 1628019 . - . ID=gene-LP088_RS08530;Name=LP088_RS08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08530;old_locus_tag=LP088_08460 NZ_CP087814.1 Protein Homology CDS 1625683 1628019 . - 0 ID=cds-WP_112742382.1;Parent=gene-LP088_RS08530;Dbxref=Genbank:WP_112742382.1;Name=WP_112742382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011960365.1;locus_tag=LP088_RS08530;product=TonB-dependent receptor;protein_id=WP_112742382.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1628054 1629304 . - . ID=gene-LP088_RS08535;Name=LP088_RS08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08535;old_locus_tag=LP088_08465 NZ_CP087814.1 Protein Homology CDS 1628054 1629304 . - 0 ID=cds-WP_112742383.1;Parent=gene-LP088_RS08535;Dbxref=Genbank:WP_112742383.1;Name=WP_112742383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004769318.1;locus_tag=LP088_RS08535;product=MFS transporter;protein_id=WP_112742383.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1629304 1629702 . - . ID=gene-LP088_RS08540;Name=LP088_RS08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08540;old_locus_tag=LP088_08470 NZ_CP087814.1 Protein Homology CDS 1629304 1629702 . - 0 ID=cds-WP_112742384.1;Parent=gene-LP088_RS08540;Dbxref=Genbank:WP_112742384.1;Name=WP_112742384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002233960.1;locus_tag=LP088_RS08540;product=hypothetical protein;protein_id=WP_112742384.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1629707 1630309 . - . ID=gene-LP088_RS08545;Name=LP088_RS08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08545;old_locus_tag=LP088_08475 NZ_CP087814.1 Protein Homology CDS 1629707 1630309 . - 0 ID=cds-WP_112742829.1;Parent=gene-LP088_RS08545;Dbxref=Genbank:WP_112742829.1;Name=WP_112742829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002237990.1;locus_tag=LP088_RS08545;product=acetyltransferase;protein_id=WP_112742829.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1630493 1632289 . - . ID=gene-LP088_RS08550;Name=LP088_RS08550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08550;old_locus_tag=LP088_08480 NZ_CP087814.1 Protein Homology CDS 1630493 1632289 . - 0 ID=cds-WP_078274569.1;Parent=gene-LP088_RS08550;Dbxref=Genbank:WP_078274569.1;Name=WP_078274569.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016099.2;locus_tag=LP088_RS08550;product=hypothetical protein;protein_id=WP_078274569.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1632303 1633583 . - . ID=gene-LP088_RS08555;Name=LP088_RS08555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08555;old_locus_tag=LP088_08485 NZ_CP087814.1 Protein Homology CDS 1632303 1633583 . - 0 ID=cds-WP_078274568.1;Parent=gene-LP088_RS08555;Dbxref=Genbank:WP_078274568.1;Name=WP_078274568.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024826.2;locus_tag=LP088_RS08555;product=SidA/IucD/PvdA family monooxygenase;protein_id=WP_078274568.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1633576 1635375 . - . ID=gene-LP088_RS08560;Name=LP088_RS08560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08560;old_locus_tag=LP088_08490 NZ_CP087814.1 Protein Homology CDS 1633576 1635375 . - 0 ID=cds-WP_078274567.1;Parent=gene-LP088_RS08560;Dbxref=Genbank:WP_078274567.1;Name=WP_078274567.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016099.2;locus_tag=LP088_RS08560;product=hypothetical protein;protein_id=WP_078274567.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1635643 1636368 . - . ID=gene-LP088_RS08565;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=LP088_RS08565;old_locus_tag=LP088_08495 NZ_CP087814.1 Protein Homology CDS 1635643 1636368 . - 0 ID=cds-WP_078274566.1;Parent=gene-LP088_RS08565;Dbxref=Genbank:WP_078274566.1;Name=WP_078274566.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005403897.1;locus_tag=LP088_RS08565;product=respiratory nitrate reductase subunit gamma;protein_id=WP_078274566.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1636365 1637162 . - . ID=gene-LP088_RS08570;Name=narJ;gbkey=Gene;gene=narJ;gene_biotype=protein_coding;locus_tag=LP088_RS08570;old_locus_tag=LP088_08500 NZ_CP087814.1 Protein Homology CDS 1636365 1637162 . - 0 ID=cds-WP_112742385.1;Parent=gene-LP088_RS08570;Dbxref=Genbank:WP_112742385.1;Name=WP_112742385.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narJ;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005403896.1;locus_tag=LP088_RS08570;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_112742385.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1637174 1638325 . - . ID=gene-LP088_RS08575;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=LP088_RS08575;old_locus_tag=LP088_08505 NZ_CP087814.1 Protein Homology CDS 1637174 1638325 . - 0 ID=cds-WP_264675887.1;Parent=gene-LP088_RS08575;Dbxref=Genbank:WP_264675887.1;Name=WP_264675887.1;Ontology_term=GO:0009061,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: protein motif:HMM:TIGR01660.1;locus_tag=LP088_RS08575;product=nitrate reductase subunit beta;protein_id=WP_264675887.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 1638363 1639478 . - . ID=gene-LP088_RS08580;Name=LP088_RS08580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS08580;old_locus_tag=LP088_08510;partial=true;pseudo=true;start_range=.,1638363 NZ_CP087814.1 Protein Homology CDS 1638363 1639478 . - 0 ID=cds-LP088_RS08580;Parent=gene-LP088_RS08580;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0015707,GO:0015514,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=nitrite efflux transmembrane transporter activity|0015514||IEA;go_process=nitrite transport|0015707||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019673235.1;locus_tag=LP088_RS08580;partial=true;product=NarK family nitrate/nitrite MFS transporter;pseudo=true;start_range=.,1638363;transl_table=11 NZ_CP087814.1 RefSeq gene 1639835 1641133 . - . ID=gene-LP088_RS08585;Name=LP088_RS08585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08585;old_locus_tag=LP088_08515 NZ_CP087814.1 Protein Homology CDS 1639835 1641133 . - 0 ID=cds-WP_112742387.1;Parent=gene-LP088_RS08585;Dbxref=Genbank:WP_112742387.1;Name=WP_112742387.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013618.2;locus_tag=LP088_RS08585;product=transglycosylase SLT domain-containing protein;protein_id=WP_112742387.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1641174 1641395 . - . ID=gene-LP088_RS08590;Name=LP088_RS08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08590;old_locus_tag=LP088_08520 NZ_CP087814.1 GeneMarkS-2+ CDS 1641174 1641395 . - 0 ID=cds-WP_147287379.1;Parent=gene-LP088_RS08590;Dbxref=Genbank:WP_147287379.1;Name=WP_147287379.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS08590;product=hypothetical protein;protein_id=WP_147287379.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1642002 1643774 . + . ID=gene-LP088_RS08595;Name=LP088_RS08595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08595;old_locus_tag=LP088_08525 NZ_CP087814.1 Protein Homology CDS 1642002 1643774 . + 0 ID=cds-WP_112742389.1;Parent=gene-LP088_RS08595;Dbxref=Genbank:WP_112742389.1;Name=WP_112742389.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004943540.1;locus_tag=LP088_RS08595;product=acyl-CoA dehydrogenase family protein;protein_id=WP_112742389.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1643989 1646295 . + . ID=gene-LP088_RS08600;Name=LP088_RS08600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08600;old_locus_tag=LP088_08530 NZ_CP087814.1 Protein Homology CDS 1643989 1646295 . + 0 ID=cds-WP_112742390.1;Parent=gene-LP088_RS08600;Dbxref=Genbank:WP_112742390.1;Name=WP_112742390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007393783.1;locus_tag=LP088_RS08600;product=site-specific recombinase;protein_id=WP_112742390.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1646301 1648190 . + . ID=gene-LP088_RS08605;Name=LP088_RS08605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08605;old_locus_tag=LP088_08535 NZ_CP087814.1 Protein Homology CDS 1646301 1648190 . + 0 ID=cds-WP_112742391.1;Parent=gene-LP088_RS08605;Dbxref=Genbank:WP_112742391.1;Name=WP_112742391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003662977.1;locus_tag=LP088_RS08605;product=AAA family ATPase;protein_id=WP_112742391.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1648187 1649221 . + . ID=gene-LP088_RS08610;Name=LP088_RS08610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08610;old_locus_tag=LP088_08540 NZ_CP087814.1 Protein Homology CDS 1648187 1649221 . + 0 ID=cds-WP_112742392.1;Parent=gene-LP088_RS08610;Dbxref=Genbank:WP_112742392.1;Name=WP_112742392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196444.1;locus_tag=LP088_RS08610;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_112742392.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1649324 1649968 . + . ID=gene-LP088_RS08615;Name=LP088_RS08615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08615;old_locus_tag=LP088_08545 NZ_CP087814.1 GeneMarkS-2+ CDS 1649324 1649968 . + 0 ID=cds-WP_112742393.1;Parent=gene-LP088_RS08615;Dbxref=Genbank:WP_112742393.1;Name=WP_112742393.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS08615;product=hypothetical protein;protein_id=WP_112742393.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1650291 1650884 . - . ID=gene-LP088_RS08620;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=LP088_RS08620;old_locus_tag=LP088_08550 NZ_CP087814.1 Protein Homology CDS 1650291 1650884 . - 0 ID=cds-WP_078274553.1;Parent=gene-LP088_RS08620;Dbxref=Genbank:WP_078274553.1;Name=WP_078274553.1;Ontology_term=GO:0006281,GO:0006310;gbkey=CDS;gene=recR;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280074.1;locus_tag=LP088_RS08620;product=recombination mediator RecR;protein_id=WP_078274553.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1650884 1651216 . - . ID=gene-LP088_RS08625;Name=LP088_RS08625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08625;old_locus_tag=LP088_08555 NZ_CP087814.1 Protein Homology CDS 1650884 1651216 . - 0 ID=cds-WP_078274552.1;Parent=gene-LP088_RS08625;Dbxref=Genbank:WP_078274552.1;Name=WP_078274552.1;Ontology_term=GO:0008150,GO:0003677,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019673357.1;locus_tag=LP088_RS08625;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_078274552.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1651610 1652896 . + . ID=gene-LP088_RS08630;Name=LP088_RS08630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08630;old_locus_tag=LP088_08560 NZ_CP087814.1 Protein Homology CDS 1651610 1652896 . + 0 ID=cds-WP_078274551.1;Parent=gene-LP088_RS08630;Dbxref=Genbank:WP_078274551.1;Name=WP_078274551.1;Ontology_term=GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198936.1;locus_tag=LP088_RS08630;product=FAD-dependent monooxygenase;protein_id=WP_078274551.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1653076 1654935 . + . ID=gene-LP088_RS08635;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=LP088_RS08635;old_locus_tag=LP088_08565 NZ_CP087814.1 Protein Homology CDS 1653076 1654935 . + 0 ID=cds-WP_112742394.1;Parent=gene-LP088_RS08635;Dbxref=Genbank:WP_112742394.1;Name=WP_112742394.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019518832.1;locus_tag=LP088_RS08635;product=RNA polymerase sigma factor RpoD;protein_id=WP_112742394.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 1655456 1655557 . - . ID=gene-LP088_RS08640;Name=LP088_RS08640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS08640;partial=true;pseudo=true;start_range=.,1655456 NZ_CP087814.1 Protein Homology CDS 1655456 1655557 . - 0 ID=cds-LP088_RS08640;Parent=gene-LP088_RS08640;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005107137.1;locus_tag=LP088_RS08640;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1655456;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 1656549 1656740 . + . ID=gene-LP088_RS08645;Name=LP088_RS08645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS08645;old_locus_tag=LP088_08570;partial=true;pseudo=true;start_range=.,1656549 NZ_CP087814.1 Protein Homology CDS 1656549 1656740 . + 0 ID=cds-LP088_RS08645;Parent=gene-LP088_RS08645;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558311.1;locus_tag=LP088_RS08645;partial=true;product=IS30 family transposase;pseudo=true;start_range=.,1656549;transl_table=11 NZ_CP087814.1 RefSeq gene 1656885 1657706 . + . ID=gene-LP088_RS08650;Name=LP088_RS08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08650;old_locus_tag=LP088_08575 NZ_CP087814.1 Protein Homology CDS 1656885 1657706 . + 0 ID=cds-WP_079324444.1;Parent=gene-LP088_RS08650;Dbxref=Genbank:WP_079324444.1;Name=WP_079324444.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: protein motif:HMM:NF015998.2;locus_tag=LP088_RS08650;product=class I SAM-dependent methyltransferase;protein_id=WP_079324444.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1657927 1658094 . + . ID=gene-LP088_RS08655;Name=LP088_RS08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08655;old_locus_tag=LP088_08580 NZ_CP087814.1 GeneMarkS-2+ CDS 1657927 1658094 . + 0 ID=cds-WP_158079668.1;Parent=gene-LP088_RS08655;Dbxref=Genbank:WP_158079668.1;Name=WP_158079668.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS08655;product=hypothetical protein;protein_id=WP_158079668.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1658302 1658640 . - . ID=gene-LP088_RS08660;Name=LP088_RS08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08660;old_locus_tag=LP088_08585 NZ_CP087814.1 Protein Homology CDS 1658302 1658640 . - 0 ID=cds-WP_264675888.1;Parent=gene-LP088_RS08660;Dbxref=Genbank:WP_264675888.1;Name=WP_264675888.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024751.2;locus_tag=LP088_RS08660;product=transposase;protein_id=WP_264675888.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1658852 1659160 . - . ID=gene-LP088_RS08665;Name=LP088_RS08665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08665;old_locus_tag=LP088_08590 NZ_CP087814.1 Protein Homology CDS 1658852 1659160 . - 0 ID=cds-WP_112742399.1-2;Parent=gene-LP088_RS08665;Dbxref=Genbank:WP_112742399.1;Name=WP_112742399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004703692.1;locus_tag=LP088_RS08665;product=IS630 transposase-related protein;protein_id=WP_112742399.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1659291 1659620 . + . ID=gene-LP088_RS08670;Name=LP088_RS08670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08670;old_locus_tag=LP088_08595 NZ_CP087814.1 Protein Homology CDS 1659291 1659620 . + 0 ID=cds-WP_115370104.1;Parent=gene-LP088_RS08670;Dbxref=Genbank:WP_115370104.1;Name=WP_115370104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011960798.1;locus_tag=LP088_RS08670;product=DUF493 domain-containing protein;protein_id=WP_115370104.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1659737 1661101 . + . ID=gene-LP088_RS08675;Name=LP088_RS08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08675;old_locus_tag=LP088_08600 NZ_CP087814.1 Protein Homology CDS 1659737 1661101 . + 0 ID=cds-WP_115370105.1;Parent=gene-LP088_RS08675;Dbxref=Genbank:WP_115370105.1;Name=WP_115370105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011960359.1;locus_tag=LP088_RS08675;product=exonuclease SbcCD subunit D C-terminal domain-containing protein;protein_id=WP_115370105.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1661214 1665323 . + . ID=gene-LP088_RS08680;Name=LP088_RS08680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08680;old_locus_tag=LP088_08605 NZ_CP087814.1 Protein Homology CDS 1661214 1665323 . + 0 ID=cds-WP_264690314.1;Parent=gene-LP088_RS08680;Dbxref=Genbank:WP_264690314.1;Name=WP_264690314.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024867.2;locus_tag=LP088_RS08680;product=AAA family ATPase;protein_id=WP_264690314.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1665682 1665957 . + . ID=gene-LP088_RS08685;Name=LP088_RS08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08685;old_locus_tag=LP088_08610 NZ_CP087814.1 GeneMarkS-2+ CDS 1665682 1665957 . + 0 ID=cds-WP_162860405.1;Parent=gene-LP088_RS08685;Dbxref=Genbank:WP_162860405.1;Name=WP_162860405.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS08685;product=hypothetical protein;protein_id=WP_162860405.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1666047 1667081 . + . ID=gene-LP088_RS08690;Name=ppk2;gbkey=Gene;gene=ppk2;gene_biotype=protein_coding;locus_tag=LP088_RS08690;old_locus_tag=LP088_08615 NZ_CP087814.1 Protein Homology CDS 1666047 1667081 . + 0 ID=cds-WP_112742401.1;Parent=gene-LP088_RS08690;Dbxref=Genbank:WP_112742401.1;Name=WP_112742401.1;Ontology_term=GO:0006793,GO:0008976,GO:0005575;gbkey=CDS;gene=ppk2;go_component=cellular_component|0005575||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=phosphorus metabolic process|0006793||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003658182.1;locus_tag=LP088_RS08690;product=polyphosphate kinase 2;protein_id=WP_112742401.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1667204 1667515 . + . ID=gene-LP088_RS08695;Name=LP088_RS08695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08695;old_locus_tag=LP088_08620 NZ_CP087814.1 Protein Homology CDS 1667204 1667515 . + 0 ID=cds-WP_078273024.1;Parent=gene-LP088_RS08695;Dbxref=Genbank:WP_078273024.1;Name=WP_078273024.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.2;locus_tag=LP088_RS08695;product=ATP-binding cassette domain-containing protein;protein_id=WP_078273024.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1667673 1667873 . + . ID=gene-LP088_RS08700;Name=LP088_RS08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08700;old_locus_tag=LP088_08625 NZ_CP087814.1 GeneMarkS-2+ CDS 1667673 1667873 . + 0 ID=cds-WP_162860406.1;Parent=gene-LP088_RS08700;Dbxref=Genbank:WP_162860406.1;Name=WP_162860406.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS08700;product=ABC transporter ATP-binding protein;protein_id=WP_162860406.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1667877 1668623 . + . ID=gene-LP088_RS08705;Name=fetB;gbkey=Gene;gene=fetB;gene_biotype=protein_coding;locus_tag=LP088_RS08705;old_locus_tag=LP088_08630 NZ_CP087814.1 Protein Homology CDS 1667877 1668623 . + 0 ID=cds-WP_264675890.1;Parent=gene-LP088_RS08705;Dbxref=Genbank:WP_264675890.1;Name=WP_264675890.1;gbkey=CDS;gene=fetB;inference=COORDINATES: protein motif:HMM:NF015605.2;locus_tag=LP088_RS08705;product=iron export ABC transporter permease subunit FetB;protein_id=WP_264675890.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1668749 1669651 . + . ID=gene-LP088_RS08710;Name=LP088_RS08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08710;old_locus_tag=LP088_08635 NZ_CP087814.1 Protein Homology CDS 1668749 1669651 . + 0 ID=cds-WP_078273027.1;Parent=gene-LP088_RS08710;Dbxref=Genbank:WP_078273027.1;Name=WP_078273027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019518803.1;locus_tag=LP088_RS08710;product=ATP-binding protein;protein_id=WP_078273027.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1669804 1670556 . - . ID=gene-LP088_RS08715;Name=LP088_RS08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08715;old_locus_tag=LP088_08640 NZ_CP087814.1 Protein Homology CDS 1669804 1670556 . - 0 ID=cds-WP_078273028.1;Parent=gene-LP088_RS08715;Dbxref=Genbank:WP_078273028.1;Name=WP_078273028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004777517.1;locus_tag=LP088_RS08715;product=MBL fold metallo-hydrolase;protein_id=WP_078273028.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1670918 1671640 . + . ID=gene-LP088_RS08720;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=LP088_RS08720;old_locus_tag=LP088_08645 NZ_CP087814.1 Protein Homology CDS 1670918 1671640 . + 0 ID=cds-WP_264675891.1;Parent=gene-LP088_RS08720;Dbxref=Genbank:WP_264675891.1;Name=WP_264675891.1;Ontology_term=GO:0006400,GO:0003725;gbkey=CDS;gene=tsaB;go_function=double-stranded RNA binding|0003725||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013108092.1;locus_tag=LP088_RS08720;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_264675891.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1671863 1672705 . + . ID=gene-LP088_RS08725;Name=LP088_RS08725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08725;old_locus_tag=LP088_08650 NZ_CP087814.1 Protein Homology CDS 1671863 1672705 . + 0 ID=cds-WP_046698234.1;Parent=gene-LP088_RS08725;Dbxref=Genbank:WP_046698234.1;Name=WP_046698234.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444152.1;locus_tag=LP088_RS08725;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_046698234.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1672839 1673642 . + . ID=gene-LP088_RS08730;Name=LP088_RS08730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08730;old_locus_tag=LP088_08655 NZ_CP087814.1 Protein Homology CDS 1672839 1673642 . + 0 ID=cds-WP_162860407.1;Parent=gene-LP088_RS08730;Dbxref=Genbank:WP_162860407.1;Name=WP_162860407.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016340.2;locus_tag=LP088_RS08730;product=class I SAM-dependent methyltransferase;protein_id=WP_162860407.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1673650 1673898 . + . ID=gene-LP088_RS08735;Name=LP088_RS08735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08735;old_locus_tag=LP088_08660 NZ_CP087814.1 GeneMarkS-2+ CDS 1673650 1673898 . + 0 ID=cds-WP_112742406.1;Parent=gene-LP088_RS08735;Dbxref=Genbank:WP_112742406.1;Name=WP_112742406.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS08735;product=hypothetical protein;protein_id=WP_112742406.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1674119 1675390 . + . ID=gene-LP088_RS08740;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=LP088_RS08740;old_locus_tag=LP088_08665 NZ_CP087814.1 Protein Homology CDS 1674119 1675390 . + 0 ID=cds-WP_264675892.1;Parent=gene-LP088_RS08740;Dbxref=Genbank:WP_264675892.1;Name=WP_264675892.1;Ontology_term=GO:0006189,GO:0009152,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003673103.1;locus_tag=LP088_RS08740;product=phosphoribosylamine--glycine ligase;protein_id=WP_264675892.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1675566 1675991 . + . ID=gene-LP088_RS08745;Name=LP088_RS08745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08745;old_locus_tag=LP088_08670 NZ_CP087814.1 Protein Homology CDS 1675566 1675991 . + 0 ID=cds-WP_112742408.1;Parent=gene-LP088_RS08745;Dbxref=Genbank:WP_112742408.1;Name=WP_112742408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512763.1;locus_tag=LP088_RS08745;product=CidA/LrgA family protein;protein_id=WP_112742408.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1675978 1676676 . + . ID=gene-LP088_RS08750;Name=LP088_RS08750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08750;old_locus_tag=LP088_08675 NZ_CP087814.1 Protein Homology CDS 1675978 1676676 . + 0 ID=cds-WP_112742409.1;Parent=gene-LP088_RS08750;Dbxref=Genbank:WP_112742409.1;Name=WP_112742409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007395530.1;locus_tag=LP088_RS08750;product=LrgB family protein;protein_id=WP_112742409.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1676716 1677144 . - . ID=gene-LP088_RS08755;Name=LP088_RS08755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08755;old_locus_tag=LP088_08680 NZ_CP087814.1 Protein Homology CDS 1676716 1677144 . - 0 ID=cds-WP_158079578.1;Parent=gene-LP088_RS08755;Dbxref=Genbank:WP_158079578.1;Name=WP_158079578.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026253.2;locus_tag=LP088_RS08755;product=WG repeat-containing protein;protein_id=WP_158079578.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1677132 1677353 . - . ID=gene-LP088_RS08760;Name=LP088_RS08760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08760;old_locus_tag=LP088_08685 NZ_CP087814.1 Protein Homology CDS 1677132 1677353 . - 0 ID=cds-WP_112742410.1;Parent=gene-LP088_RS08760;Dbxref=Genbank:WP_112742410.1;Name=WP_112742410.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026253.2;locus_tag=LP088_RS08760;product=WG repeat-containing protein;protein_id=WP_112742410.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1677463 1679067 . + . ID=gene-LP088_RS08765;Name=LP088_RS08765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08765;old_locus_tag=LP088_08690 NZ_CP087814.1 Protein Homology CDS 1677463 1679067 . + 0 ID=cds-WP_112742411.1;Parent=gene-LP088_RS08765;Dbxref=Genbank:WP_112742411.1;Name=WP_112742411.1;Ontology_term=GO:0019646,GO:0009055,GO:0070069;gbkey=CDS;go_component=cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003659226.1;locus_tag=LP088_RS08765;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_112742411.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1679070 1680209 . + . ID=gene-LP088_RS08770;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=LP088_RS08770;old_locus_tag=LP088_08695 NZ_CP087814.1 Protein Homology CDS 1679070 1680209 . + 0 ID=cds-WP_112742412.1;Parent=gene-LP088_RS08770;Dbxref=Genbank:WP_112742412.1;Name=WP_112742412.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007394351.1;locus_tag=LP088_RS08770;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_112742412.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1680220 1680351 . + . ID=gene-LP088_RS08775;Name=cydX;gbkey=Gene;gene=cydX;gene_biotype=protein_coding;locus_tag=LP088_RS08775;old_locus_tag=LP088_08700 NZ_CP087814.1 Protein Homology CDS 1680220 1680351 . + 0 ID=cds-WP_078273038.1;Parent=gene-LP088_RS08775;Dbxref=Genbank:WP_078273038.1;Name=WP_078273038.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydX;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003659228.1;locus_tag=LP088_RS08775;product=cytochrome bd-I oxidase subunit CydX;protein_id=WP_078273038.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1680703 1682379 . - . ID=gene-LP088_RS08780;Name=LP088_RS08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08780;old_locus_tag=LP088_08705 NZ_CP087814.1 Protein Homology CDS 1680703 1682379 . - 0 ID=cds-WP_112742413.1;Parent=gene-LP088_RS08780;Dbxref=Genbank:WP_112742413.1;Name=WP_112742413.1;Ontology_term=GO:0009401,GO:0022877,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: protein motif:HMM:TIGR01427.1;locus_tag=LP088_RS08780;product=fructose-specific PTS transporter subunit EIIC;protein_id=WP_112742413.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1682777 1683853 . - . ID=gene-LP088_RS08785;Name=LP088_RS08785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08785;old_locus_tag=LP088_08710 NZ_CP087814.1 Protein Homology CDS 1682777 1683853 . - 0 ID=cds-WP_244893619.1;Parent=gene-LP088_RS08785;Dbxref=Genbank:WP_244893619.1;Name=WP_244893619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519878.1;locus_tag=LP088_RS08785;product=hexose kinase;protein_id=WP_244893619.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1683759 1686641 . - . ID=gene-LP088_RS08790;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=LP088_RS08790;old_locus_tag=LP088_08715 NZ_CP087814.1 Protein Homology CDS 1683759 1686641 . - 0 ID=cds-WP_264675893.1;Parent=gene-LP088_RS08790;Dbxref=Genbank:WP_264675893.1;Name=WP_264675893.1;Ontology_term=GO:0006808,GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=regulation of nitrogen utilization|0006808||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004947088.1;locus_tag=LP088_RS08790;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_264675893.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1687156 1687929 . - . ID=gene-LP088_RS08795;Name=LP088_RS08795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08795;old_locus_tag=LP088_08720 NZ_CP087814.1 Protein Homology CDS 1687156 1687929 . - 0 ID=cds-WP_112742415.1;Parent=gene-LP088_RS08795;Dbxref=Genbank:WP_112742415.1;Name=WP_112742415.1;Ontology_term=GO:0008150,GO:0051540,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=metal cluster binding|0051540||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280543.1;locus_tag=LP088_RS08795;product=Nif3-like dinuclear metal center hexameric protein;protein_id=WP_112742415.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1688318 1689823 . + . ID=gene-LP088_RS08800;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=LP088_RS08800;old_locus_tag=LP088_08725 NZ_CP087814.1 Protein Homology CDS 1688318 1689823 . + 0 ID=cds-WP_158079579.1;Parent=gene-LP088_RS08800;Dbxref=Genbank:WP_158079579.1;Name=WP_158079579.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: protein motif:HMM:TIGR00237.1;locus_tag=LP088_RS08800;product=exodeoxyribonuclease VII large subunit;protein_id=WP_158079579.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1689879 1690823 . + . ID=gene-LP088_RS08805;Name=LP088_RS08805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08805;old_locus_tag=LP088_08730 NZ_CP087814.1 Protein Homology CDS 1689879 1690823 . + 0 ID=cds-WP_078273043.1;Parent=gene-LP088_RS08805;Dbxref=Genbank:WP_078273043.1;Name=WP_078273043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000075011.1;locus_tag=LP088_RS08805;product=DMT family transporter;protein_id=WP_078273043.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1690981 1691592 . + . ID=gene-LP088_RS08810;Name=LP088_RS08810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08810;old_locus_tag=LP088_08735 NZ_CP087814.1 Protein Homology CDS 1690981 1691592 . + 0 ID=cds-WP_078273044.1;Parent=gene-LP088_RS08810;Dbxref=Genbank:WP_078273044.1;Name=WP_078273044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003658333.1;locus_tag=LP088_RS08810;product=TIGR00730 family Rossman fold protein;protein_id=WP_078273044.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1692441 1692869 . + . ID=gene-LP088_RS08815;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=LP088_RS08815;old_locus_tag=LP088_08740 NZ_CP087814.1 Protein Homology CDS 1692441 1692869 . + 0 ID=cds-WP_078273154.1;Parent=gene-LP088_RS08815;Dbxref=Genbank:WP_078273154.1;Name=WP_078273154.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005107117.1;locus_tag=LP088_RS08815;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_078273154.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1692880 1694223 . + . ID=gene-LP088_RS08820;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=LP088_RS08820;old_locus_tag=LP088_08745 NZ_CP087814.1 Protein Homology CDS 1692880 1694223 . + 0 ID=cds-WP_078273045.1;Parent=gene-LP088_RS08820;Dbxref=Genbank:WP_078273045.1;Name=WP_078273045.1;Ontology_term=GO:0006633,GO:0003989,GO:0004075,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA,biotin carboxylase activity|0004075||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201258.1;locus_tag=LP088_RS08820;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_078273045.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1694282 1695178 . - . ID=gene-LP088_RS08825;Name=LP088_RS08825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08825;old_locus_tag=LP088_08750 NZ_CP087814.1 Protein Homology CDS 1694282 1695178 . - 0 ID=cds-WP_078273046.1;Parent=gene-LP088_RS08825;Dbxref=Genbank:WP_078273046.1;Name=WP_078273046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009501768.1;locus_tag=LP088_RS08825;product=LysR family transcriptional regulator;protein_id=WP_078273046.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1695777 1696937 . + . ID=gene-LP088_RS08830;Name=LP088_RS08830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08830;old_locus_tag=LP088_08755 NZ_CP087814.1 Protein Homology CDS 1695777 1696937 . + 0 ID=cds-WP_264676336.1;Parent=gene-LP088_RS08830;Dbxref=Genbank:WP_264676336.1;Name=WP_264676336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657474.1;locus_tag=LP088_RS08830;product=MFS transporter;protein_id=WP_264676336.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1697124 1697909 . + . ID=gene-LP088_RS08835;Name=LP088_RS08835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08835;old_locus_tag=LP088_08760 NZ_CP087814.1 GeneMarkS-2+ CDS 1697124 1697909 . + 0 ID=cds-WP_078273047.1;Parent=gene-LP088_RS08835;Dbxref=Genbank:WP_078273047.1;Name=WP_078273047.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS08835;product=hypothetical protein;protein_id=WP_078273047.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1697909 1698361 . + . ID=gene-LP088_RS08840;Name=LP088_RS08840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08840;old_locus_tag=LP088_08765 NZ_CP087814.1 Protein Homology CDS 1697909 1698361 . + 0 ID=cds-WP_078273048.1;Parent=gene-LP088_RS08840;Dbxref=Genbank:WP_078273048.1;Name=WP_078273048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005401889.1;locus_tag=LP088_RS08840;product=ATP-binding protein;protein_id=WP_078273048.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1698343 1699098 . + . ID=gene-LP088_RS08845;Name=LP088_RS08845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08845;old_locus_tag=LP088_08770 NZ_CP087814.1 Protein Homology CDS 1698343 1699098 . + 0 ID=cds-WP_078273049.1;Parent=gene-LP088_RS08845;Dbxref=Genbank:WP_078273049.1;Name=WP_078273049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005243064.1;locus_tag=LP088_RS08845;product=guanylyltransferase;protein_id=WP_078273049.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1699315 1700841 . - . ID=gene-LP088_RS08850;Name=LP088_RS08850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08850;old_locus_tag=LP088_08775 NZ_CP087814.1 Protein Homology CDS 1699315 1700841 . - 0 ID=cds-WP_078273050.1;Parent=gene-LP088_RS08850;Dbxref=Genbank:WP_078273050.1;Name=WP_078273050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003673010.1;locus_tag=LP088_RS08850;product=acetyl-CoA hydrolase/transferase family protein;protein_id=WP_078273050.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1701006 1702101 . - . ID=gene-LP088_RS08855;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=LP088_RS08855;old_locus_tag=LP088_08780 NZ_CP087814.1 Protein Homology CDS 1702030 1702101 . - 0 ID=cds-WP_112742417.1;Parent=gene-LP088_RS08855;Dbxref=Genbank:WP_112742417.1;Name=WP_112742417.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0003747;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_152411763.1;locus_tag=LP088_RS08855;product=peptide chain release factor 2;protein_id=WP_112742417.1;transl_table=11 NZ_CP087814.1 Protein Homology CDS 1701006 1702028 . - 0 ID=cds-WP_112742417.1;Parent=gene-LP088_RS08855;Dbxref=Genbank:WP_112742417.1;Name=WP_112742417.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0003747;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_152411763.1;locus_tag=LP088_RS08855;product=peptide chain release factor 2;protein_id=WP_112742417.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1702322 1703584 . + . ID=gene-LP088_RS08860;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=LP088_RS08860;old_locus_tag=LP088_08785 NZ_CP087814.1 Protein Homology CDS 1702322 1703584 . + 0 ID=cds-WP_078273051.1;Parent=gene-LP088_RS08860;Dbxref=Genbank:WP_078273051.1;Name=WP_078273051.1;Ontology_term=GO:0015813,GO:0015501;gbkey=CDS;gene=gltS;go_function=glutamate:sodium symporter activity|0015501||IEA;go_process=L-glutamate transmembrane transport|0015813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201877.1;locus_tag=LP088_RS08860;product=sodium/glutamate symporter;protein_id=WP_078273051.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1704294 1705883 . - . ID=gene-LP088_RS08865;Name=LP088_RS08865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08865;old_locus_tag=LP088_08790 NZ_CP087814.1 Protein Homology CDS 1704294 1705883 . - 0 ID=cds-WP_078273052.1;Parent=gene-LP088_RS08865;Dbxref=Genbank:WP_078273052.1;Name=WP_078273052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019672802.1;locus_tag=LP088_RS08865;product=inorganic phosphate transporter;protein_id=WP_078273052.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1706372 1706602 . - . ID=gene-LP088_RS08870;Name=LP088_RS08870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08870;old_locus_tag=LP088_08795 NZ_CP087814.1 GeneMarkS-2+ CDS 1706372 1706602 . - 0 ID=cds-WP_078273053.1;Parent=gene-LP088_RS08870;Dbxref=Genbank:WP_078273053.1;Name=WP_078273053.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS08870;product=hypothetical protein;protein_id=WP_078273053.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1706781 1709168 . - . ID=gene-LP088_RS08875;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;locus_tag=LP088_RS08875;old_locus_tag=LP088_08800 NZ_CP087814.1 Protein Homology CDS 1706781 1709168 . - 0 ID=cds-WP_228157692.1;Parent=gene-LP088_RS08875;Dbxref=Genbank:WP_228157692.1;Name=WP_228157692.1;Ontology_term=GO:0009252,GO:0046677,GO:0008233,GO:0008658,GO:0008955,GO:0009274;gbkey=CDS;gene=mrcB;go_component=peptidoglycan-based cell wall|0009274||IEA;go_function=peptidase activity|0008233||IEA,penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011960841.1;locus_tag=LP088_RS08875;product=penicillin-binding protein 1B;protein_id=WP_228157692.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1709505 1710401 . - . ID=gene-LP088_RS08880;Name=LP088_RS08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08880;old_locus_tag=LP088_08805 NZ_CP087814.1 Protein Homology CDS 1709505 1710401 . - 0 ID=cds-WP_078273055.1;Parent=gene-LP088_RS08880;Dbxref=Genbank:WP_078273055.1;Name=WP_078273055.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015431.2;locus_tag=LP088_RS08880;product=LysR family transcriptional regulator;protein_id=WP_078273055.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1710700 1711302 . + . ID=gene-LP088_RS08885;Name=LP088_RS08885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08885;old_locus_tag=LP088_08810 NZ_CP087814.1 Protein Homology CDS 1710700 1711302 . + 0 ID=cds-WP_112742418.1;Parent=gene-LP088_RS08885;Dbxref=Genbank:WP_112742418.1;Name=WP_112742418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513876.1;locus_tag=LP088_RS08885;product=nitroreductase family protein;protein_id=WP_112742418.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1711435 1712286 . + . ID=gene-LP088_RS08890;Name=LP088_RS08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08890;old_locus_tag=LP088_08815 NZ_CP087814.1 Protein Homology CDS 1711435 1712286 . + 0 ID=cds-WP_112742419.1;Parent=gene-LP088_RS08890;Dbxref=Genbank:WP_112742419.1;Name=WP_112742419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201758.1;locus_tag=LP088_RS08890;product=lytic transglycosylase domain-containing protein;protein_id=WP_112742419.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1712450 1713358 . + . ID=gene-LP088_RS08895;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=LP088_RS08895;old_locus_tag=LP088_08820 NZ_CP087814.1 Protein Homology CDS 1712450 1713358 . + 0 ID=cds-WP_112742420.1;Parent=gene-LP088_RS08895;Dbxref=Genbank:WP_112742420.1;Name=WP_112742420.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=htpX;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009501605.1;locus_tag=LP088_RS08895;product=protease HtpX;protein_id=WP_112742420.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1713385 1714641 . - . ID=gene-LP088_RS08900;Name=LP088_RS08900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08900;old_locus_tag=LP088_08825 NZ_CP087814.1 Protein Homology CDS 1713385 1714641 . - 0 ID=cds-WP_112742421.1;Parent=gene-LP088_RS08900;Dbxref=Genbank:WP_112742421.1;Name=WP_112742421.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF036878.2;locus_tag=LP088_RS08900;product=PIN domain-containing protein;protein_id=WP_112742421.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1714654 1715358 . - . ID=gene-LP088_RS08905;Name=LP088_RS08905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08905;old_locus_tag=LP088_08830 NZ_CP087814.1 Protein Homology CDS 1714654 1715358 . - 0 ID=cds-WP_078273064.1;Parent=gene-LP088_RS08905;Dbxref=Genbank:WP_078273064.1;Name=WP_078273064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657471.1;locus_tag=LP088_RS08905;product=LrgB family protein;protein_id=WP_078273064.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1715355 1715738 . - . ID=gene-LP088_RS08910;Name=LP088_RS08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08910;old_locus_tag=LP088_08835 NZ_CP087814.1 Protein Homology CDS 1715355 1715738 . - 0 ID=cds-WP_078273065.1;Parent=gene-LP088_RS08910;Dbxref=Genbank:WP_078273065.1;Name=WP_078273065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003670352.1;locus_tag=LP088_RS08910;product=CidA/LrgA family protein;protein_id=WP_078273065.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1716133 1717173 . - . ID=gene-LP088_RS08915;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=LP088_RS08915;old_locus_tag=LP088_08840 NZ_CP087814.1 Protein Homology CDS 1716133 1717173 . - 0 ID=cds-WP_078273066.1;Parent=gene-LP088_RS08915;Dbxref=Genbank:WP_078273066.1;Name=WP_078273066.1;Ontology_term=GO:0006465,GO:0004252;gbkey=CDS;gene=sppA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007395376.1;locus_tag=LP088_RS08915;product=signal peptide peptidase SppA;protein_id=WP_078273066.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1717523 1720105 . - . ID=gene-LP088_RS08920;Name=LP088_RS08920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08920;old_locus_tag=LP088_08845 NZ_CP087814.1 Protein Homology CDS 1717523 1720105 . - 0 ID=cds-WP_112742422.1;Parent=gene-LP088_RS08920;Dbxref=Genbank:WP_112742422.1;Name=WP_112742422.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015714.2;locus_tag=LP088_RS08920;product=ComEC/Rec2 family competence protein;protein_id=WP_112742422.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1720124 1720903 . - . ID=gene-LP088_RS08925;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=LP088_RS08925;old_locus_tag=LP088_08850 NZ_CP087814.1 Protein Homology CDS 1720124 1720903 . - 0 ID=cds-WP_112742423.1;Parent=gene-LP088_RS08925;Dbxref=Genbank:WP_112742423.1;Name=WP_112742423.1;Ontology_term=GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019673707.1;locus_tag=LP088_RS08925;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_112742423.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1720903 1721397 . - . ID=gene-LP088_RS08930;Name=LP088_RS08930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08930;old_locus_tag=LP088_08855 NZ_CP087814.1 Protein Homology CDS 1720903 1721397 . - 0 ID=cds-WP_078273069.1;Parent=gene-LP088_RS08930;Dbxref=Genbank:WP_078273069.1;Name=WP_078273069.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016839.2;locus_tag=LP088_RS08930;product=septum formation initiator family protein;protein_id=WP_078273069.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1721399 1722712 . - . ID=gene-LP088_RS08935;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=LP088_RS08935;old_locus_tag=LP088_08860 NZ_CP087814.1 Protein Homology CDS 1721399 1722712 . - 0 ID=cds-WP_078273070.1;Parent=gene-LP088_RS08935;Dbxref=Genbank:WP_078273070.1;Name=WP_078273070.1;Ontology_term=GO:0006096,GO:0004634;gbkey=CDS;gene=eno;go_function=phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007395288.1;locus_tag=LP088_RS08935;product=phosphopyruvate hydratase;protein_id=WP_078273070.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1722783 1723148 . - . ID=gene-LP088_RS08940;Name=LP088_RS08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08940;old_locus_tag=LP088_08865 NZ_CP087814.1 GeneMarkS-2+ CDS 1722783 1723148 . - 0 ID=cds-WP_078273071.1;Parent=gene-LP088_RS08940;Dbxref=Genbank:WP_078273071.1;Name=WP_078273071.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS08940;product=hypothetical protein;protein_id=WP_078273071.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1723180 1723332 . - . ID=gene-LP088_RS08945;Name=LP088_RS08945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08945;old_locus_tag=LP088_08870 NZ_CP087814.1 GeneMarkS-2+ CDS 1723180 1723332 . - 0 ID=cds-WP_158079580.1;Parent=gene-LP088_RS08945;Dbxref=Genbank:WP_158079580.1;Name=WP_158079580.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS08945;product=hypothetical protein;protein_id=WP_158079580.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1723715 1724581 . - . ID=gene-LP088_RS08950;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=LP088_RS08950;old_locus_tag=LP088_08875 NZ_CP087814.1 Protein Homology CDS 1723715 1724581 . - 0 ID=cds-WP_078273073.1;Parent=gene-LP088_RS08950;Dbxref=Genbank:WP_078273073.1;Name=WP_078273073.1;Ontology_term=GO:0009058,GO:0008676;gbkey=CDS;gene=kdsA;go_function=3-deoxy-8-phosphooctulonate synthase activity|0008676||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009501267.1;locus_tag=LP088_RS08950;product=3-deoxy-8-phosphooctulonate synthase;protein_id=WP_078273073.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1724578 1724997 . - . ID=gene-LP088_RS08955;Name=LP088_RS08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08955;old_locus_tag=LP088_08880 NZ_CP087814.1 Protein Homology CDS 1724578 1724997 . - 0 ID=cds-WP_158079581.1;Parent=gene-LP088_RS08955;Dbxref=Genbank:WP_158079581.1;Name=WP_158079581.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013970.2;locus_tag=LP088_RS08955;product=PIN domain-containing protein;protein_id=WP_158079581.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1724984 1725220 . - . ID=gene-LP088_RS08960;Name=LP088_RS08960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08960;old_locus_tag=LP088_08885 NZ_CP087814.1 GeneMarkS-2+ CDS 1724984 1725220 . - 0 ID=cds-WP_029102036.1;Parent=gene-LP088_RS08960;Dbxref=Genbank:WP_029102036.1;Name=WP_029102036.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS08960;product=hypothetical protein;protein_id=WP_029102036.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1725290 1726924 . - . ID=gene-LP088_RS08965;Name=LP088_RS08965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08965;old_locus_tag=LP088_08890 NZ_CP087814.1 Protein Homology CDS 1725290 1726924 . - 0 ID=cds-WP_078273156.1;Parent=gene-LP088_RS08965;Dbxref=Genbank:WP_078273156.1;Name=WP_078273156.1;Ontology_term=GO:0006221,GO:0006241,GO:0003883;gbkey=CDS;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,CTP biosynthetic process|0006241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019673701.1;locus_tag=LP088_RS08965;product=CTP synthase;protein_id=WP_078273156.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1727067 1728467 . - . ID=gene-LP088_RS08970;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=LP088_RS08970;old_locus_tag=LP088_08895 NZ_CP087814.1 Protein Homology CDS 1727067 1728467 . - 0 ID=cds-WP_264676337.1;Parent=gene-LP088_RS08970;Dbxref=Genbank:WP_264676337.1;Name=WP_264676337.1;Ontology_term=GO:0018339,GO:0008172,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=rimO;go_function=S-methyltransferase activity|0008172||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid|0018339||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443809.1;locus_tag=LP088_RS08970;product=30S ribosomal protein S12 methylthiotransferase RimO;protein_id=WP_264676337.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1728920 1729004 . - . ID=gene-LP088_RS08975;Name=LP088_RS08975;gbkey=Gene;gene_biotype=tRNA;locus_tag=LP088_RS08975;old_locus_tag=LP088_08900 NZ_CP087814.1 tRNAscan-SE tRNA 1728920 1729004 . - . ID=rna-LP088_RS08975;Parent=gene-LP088_RS08975;anticodon=(pos:complement(1728968..1728970));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS08975;product=tRNA-Leu NZ_CP087814.1 tRNAscan-SE exon 1728920 1729004 . - . ID=exon-LP088_RS08975-1;Parent=rna-LP088_RS08975;anticodon=(pos:complement(1728968..1728970));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS08975;product=tRNA-Leu NZ_CP087814.1 RefSeq gene 1729100 1729714 . - . ID=gene-LP088_RS08980;Name=LP088_RS08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08980;old_locus_tag=LP088_08905 NZ_CP087814.1 Protein Homology CDS 1729100 1729714 . - 0 ID=cds-WP_078273076.1;Parent=gene-LP088_RS08980;Dbxref=Genbank:WP_078273076.1;Name=WP_078273076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005006620.1;locus_tag=LP088_RS08980;product=nicotinamidase;protein_id=WP_078273076.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1729921 1731405 . + . ID=gene-LP088_RS08985;Name=LP088_RS08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08985;old_locus_tag=LP088_08910 NZ_CP087814.1 Protein Homology CDS 1729921 1731405 . + 0 ID=cds-WP_078273157.1;Parent=gene-LP088_RS08985;Dbxref=Genbank:WP_078273157.1;Name=WP_078273157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519425.1;locus_tag=LP088_RS08985;product=alanine:cation symporter family protein;protein_id=WP_078273157.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1731476 1732276 . - . ID=gene-LP088_RS08990;Name=LP088_RS08990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08990;old_locus_tag=LP088_08915 NZ_CP087814.1 Protein Homology CDS 1731476 1732276 . - 0 ID=cds-WP_078273077.1;Parent=gene-LP088_RS08990;Dbxref=Genbank:WP_078273077.1;Name=WP_078273077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003659474.1;locus_tag=LP088_RS08990;product=ferredoxin--NADP reductase;protein_id=WP_078273077.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1732505 1734019 . - . ID=gene-LP088_RS08995;Name=LP088_RS08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS08995;old_locus_tag=LP088_08920 NZ_CP087814.1 Protein Homology CDS 1732505 1734019 . - 0 ID=cds-WP_078273078.1;Parent=gene-LP088_RS08995;Dbxref=Genbank:WP_078273078.1;Name=WP_078273078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003668638.1;locus_tag=LP088_RS08995;product=NADH-quinone oxidoreductase subunit N;protein_id=WP_078273078.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1734019 1735695 . - . ID=gene-LP088_RS09000;Name=nuoM;gbkey=Gene;gene=nuoM;gene_biotype=protein_coding;locus_tag=LP088_RS09000;old_locus_tag=LP088_08925 NZ_CP087814.1 Protein Homology CDS 1734019 1735695 . - 0 ID=cds-WP_078273079.1;Parent=gene-LP088_RS09000;Dbxref=Genbank:WP_078273079.1;Name=WP_078273079.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoM;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005158618.1;locus_tag=LP088_RS09000;product=NADH-quinone oxidoreductase subunit M;protein_id=WP_078273079.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1735697 1737553 . - . ID=gene-LP088_RS09005;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=LP088_RS09005;old_locus_tag=LP088_08930 NZ_CP087814.1 Protein Homology CDS 1735697 1737553 . - 0 ID=cds-WP_078273080.1;Parent=gene-LP088_RS09005;Dbxref=Genbank:WP_078273080.1;Name=WP_078273080.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoL;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003668641.1;locus_tag=LP088_RS09005;product=NADH-quinone oxidoreductase subunit L;protein_id=WP_078273080.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1737560 1737910 . - . ID=gene-LP088_RS09010;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=LP088_RS09010;old_locus_tag=LP088_08935 NZ_CP087814.1 Protein Homology CDS 1737560 1737910 . - 0 ID=cds-WP_078273081.1;Parent=gene-LP088_RS09010;Dbxref=Genbank:WP_078273081.1;Name=WP_078273081.1;Ontology_term=GO:0042773,GO:0016651;gbkey=CDS;gene=nuoK;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003656526.1;locus_tag=LP088_RS09010;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=WP_078273081.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1737907 1738533 . - . ID=gene-LP088_RS09015;Name=nuoJ;gbkey=Gene;gene=nuoJ;gene_biotype=protein_coding;locus_tag=LP088_RS09015;old_locus_tag=LP088_08940 NZ_CP087814.1 Protein Homology CDS 1737907 1738533 . - 0 ID=cds-WP_078273082.1;Parent=gene-LP088_RS09015;Dbxref=Genbank:WP_078273082.1;Name=WP_078273082.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoJ;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003673036.1;locus_tag=LP088_RS09015;product=NADH-quinone oxidoreductase subunit J;protein_id=WP_078273082.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1738530 1739078 . - . ID=gene-LP088_RS09020;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=LP088_RS09020;old_locus_tag=LP088_08945 NZ_CP087814.1 Protein Homology CDS 1738530 1739078 . - 0 ID=cds-WP_078273083.1;Parent=gene-LP088_RS09020;Dbxref=Genbank:WP_078273083.1;Name=WP_078273083.1;Ontology_term=GO:0016651,GO:0051539,GO:0016020;gbkey=CDS;gene=nuoI;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013107845.1;locus_tag=LP088_RS09020;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=WP_078273083.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1739079 1740107 . - . ID=gene-LP088_RS09025;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=LP088_RS09025;old_locus_tag=LP088_08950 NZ_CP087814.1 Protein Homology CDS 1739079 1740107 . - 0 ID=cds-WP_078273084.1;Parent=gene-LP088_RS09025;Dbxref=Genbank:WP_078273084.1;Name=WP_078273084.1;gbkey=CDS;gene=nuoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003656531.1;locus_tag=LP088_RS09025;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=WP_078273084.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1740108 1743224 . - . ID=gene-LP088_RS09030;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=LP088_RS09030;old_locus_tag=LP088_08955 NZ_CP087814.1 Protein Homology CDS 1740108 1743224 . - 0 ID=cds-WP_078273085.1;Parent=gene-LP088_RS09030;Dbxref=Genbank:WP_078273085.1;Name=WP_078273085.1;Ontology_term=GO:0006120,GO:0050136;gbkey=CDS;gene=nuoG;go_function=NADH dehydrogenase (quinone) activity|0050136||IEA;go_process=mitochondrial electron transport%2C NADH to ubiquinone|0006120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013107843.1;locus_tag=LP088_RS09030;product=NADH-quinone oxidoreductase subunit NuoG;protein_id=WP_078273085.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1743226 1744644 . - . ID=gene-LP088_RS09035;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=LP088_RS09035;old_locus_tag=LP088_08960 NZ_CP087814.1 Protein Homology CDS 1743226 1744644 . - 0 ID=cds-WP_078273086.1;Parent=gene-LP088_RS09035;Dbxref=Genbank:WP_078273086.1;Name=WP_078273086.1;Ontology_term=GO:0050136;gbkey=CDS;gene=nuoF;go_function=NADH dehydrogenase (quinone) activity|0050136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003656534.1;locus_tag=LP088_RS09035;product=NADH-quinone oxidoreductase subunit NuoF;protein_id=WP_078273086.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1744641 1745150 . - . ID=gene-LP088_RS09040;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=protein_coding;locus_tag=LP088_RS09040;old_locus_tag=LP088_08965 NZ_CP087814.1 Protein Homology CDS 1744641 1745150 . - 0 ID=cds-WP_078273087.1;Parent=gene-LP088_RS09040;Dbxref=Genbank:WP_078273087.1;Name=WP_078273087.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nuoE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512927.1;locus_tag=LP088_RS09040;product=NADH-quinone oxidoreductase subunit NuoE;protein_id=WP_078273087.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1745321 1745923 . + . ID=gene-LP088_RS09045;Name=LP088_RS09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09045;old_locus_tag=LP088_08970 NZ_CP087814.1 Protein Homology CDS 1745321 1745923 . + 0 ID=cds-WP_264675895.1;Parent=gene-LP088_RS09045;Dbxref=Genbank:WP_264675895.1;Name=WP_264675895.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024260.2;locus_tag=LP088_RS09045;product=helix-turn-helix domain-containing protein;protein_id=WP_264675895.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1745969 1747264 . - . ID=gene-LP088_RS09050;Name=LP088_RS09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09050;old_locus_tag=LP088_08975 NZ_CP087814.1 Protein Homology CDS 1745969 1747264 . - 0 ID=cds-WP_264675896.1;Parent=gene-LP088_RS09050;Dbxref=Genbank:WP_264675896.1;Name=WP_264675896.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF015531.2;locus_tag=LP088_RS09050;product=S41 family peptidase;protein_id=WP_264675896.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1747294 1747509 . - . ID=gene-LP088_RS09055;Name=LP088_RS09055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09055;old_locus_tag=LP088_08980 NZ_CP087814.1 GeneMarkS-2+ CDS 1747294 1747509 . - 0 ID=cds-WP_264675897.1;Parent=gene-LP088_RS09055;Dbxref=Genbank:WP_264675897.1;Name=WP_264675897.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS09055;product=hypothetical protein;protein_id=WP_264675897.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1747618 1747944 . - . ID=gene-LP088_RS09060;Name=LP088_RS09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09060;old_locus_tag=LP088_08985 NZ_CP087814.1 GeneMarkS-2+ CDS 1747618 1747944 . - 0 ID=cds-WP_264675898.1;Parent=gene-LP088_RS09060;Dbxref=Genbank:WP_264675898.1;Name=WP_264675898.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS09060;product=hypothetical protein;protein_id=WP_264675898.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1748026 1749774 . - . ID=gene-LP088_RS09065;Name=nuoC;gbkey=Gene;gene=nuoC;gene_biotype=protein_coding;locus_tag=LP088_RS09065;old_locus_tag=LP088_08990 NZ_CP087814.1 Protein Homology CDS 1748026 1749774 . - 0 ID=cds-WP_112742426.1;Parent=gene-LP088_RS09065;Dbxref=Genbank:WP_112742426.1;Name=WP_112742426.1;Ontology_term=GO:0048038,GO:0050136,GO:0051287,GO:0030964;gbkey=CDS;gene=nuoC;go_component=NADH dehydrogenase complex|0030964||IEA;go_function=quinone binding|0048038||IEA,NADH dehydrogenase (quinone) activity|0050136||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013107840.1;locus_tag=LP088_RS09065;product=NADH-quinone oxidoreductase subunit C/D;protein_id=WP_112742426.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 1749848 1750767 . - . ID=gene-LP088_RS09070;Name=LP088_RS09070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS09070;old_locus_tag=LP088_08995;pseudo=true NZ_CP087814.1 Protein Homology CDS 1749848 1750767 . - 0 ID=cds-LP088_RS09070;Parent=gene-LP088_RS09070;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001061075.1;locus_tag=LP088_RS09070;product=DMT family transporter;pseudo=true;transl_table=11 NZ_CP087814.1 RefSeq gene 1750760 1751071 . - . ID=gene-LP088_RS09075;Name=LP088_RS09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09075;old_locus_tag=LP088_09000 NZ_CP087814.1 Protein Homology CDS 1750760 1751071 . - 0 ID=cds-WP_264675899.1;Parent=gene-LP088_RS09075;Dbxref=Genbank:WP_264675899.1;Name=WP_264675899.1;Ontology_term=GO:0006629;gbkey=CDS;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: protein motif:HMM:NF012699.2;locus_tag=LP088_RS09075;product=fatty acid desaturase;protein_id=WP_264675899.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1751052 1751702 . - . ID=gene-LP088_RS09080;Name=LP088_RS09080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09080;old_locus_tag=LP088_09005 NZ_CP087814.1 Protein Homology CDS 1751052 1751702 . - 0 ID=cds-WP_264675900.1;Parent=gene-LP088_RS09080;Dbxref=Genbank:WP_264675900.1;Name=WP_264675900.1;Ontology_term=GO:0006629;gbkey=CDS;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: protein motif:HMM:NF012699.2;locus_tag=LP088_RS09080;product=fatty acid desaturase;protein_id=WP_264675900.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1751756 1752424 . - . ID=gene-LP088_RS09085;Name=LP088_RS09085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09085;old_locus_tag=LP088_09010 NZ_CP087814.1 Protein Homology CDS 1751756 1752424 . - 0 ID=cds-WP_112742427.1;Parent=gene-LP088_RS09085;Dbxref=Genbank:WP_112742427.1;Name=WP_112742427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004994287.1;locus_tag=LP088_RS09085;product=NADH-quinone oxidoreductase subunit B;protein_id=WP_112742427.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1752502 1752981 . - . ID=gene-LP088_RS09090;Name=LP088_RS09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09090;old_locus_tag=LP088_09015 NZ_CP087814.1 Protein Homology CDS 1752502 1752981 . - 0 ID=cds-WP_112742428.1;Parent=gene-LP088_RS09090;Dbxref=Genbank:WP_112742428.1;Name=WP_112742428.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020961.2;locus_tag=LP088_RS09090;product=DUF2004 domain-containing protein;protein_id=WP_112742428.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1753044 1753445 . - . ID=gene-LP088_RS09095;Name=LP088_RS09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09095;old_locus_tag=LP088_09020 NZ_CP087814.1 GeneMarkS-2+ CDS 1753044 1753445 . - 0 ID=cds-WP_264675901.1;Parent=gene-LP088_RS09095;Dbxref=Genbank:WP_264675901.1;Name=WP_264675901.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS09095;product=hypothetical protein;protein_id=WP_264675901.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1753520 1754125 . - . ID=gene-LP088_RS09100;Name=ndhC;gbkey=Gene;gene=ndhC;gene_biotype=protein_coding;locus_tag=LP088_RS09100;old_locus_tag=LP088_09025 NZ_CP087814.1 Protein Homology CDS 1753520 1754125 . - 0 ID=cds-WP_112742430.1;Parent=gene-LP088_RS09100;Dbxref=Genbank:WP_112742430.1;Name=WP_112742430.1;Ontology_term=GO:0008137;gbkey=CDS;gene=ndhC;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003656554.1;locus_tag=LP088_RS09100;product=NADH-quinone oxidoreductase subunit A;protein_id=WP_112742430.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1754319 1758242 . - . ID=gene-LP088_RS09105;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;gene_synonym=purI;locus_tag=LP088_RS09105;old_locus_tag=LP088_09030 NZ_CP087814.1 Protein Homology CDS 1754319 1758242 . - 0 ID=cds-WP_244893621.1;Parent=gene-LP088_RS09105;Dbxref=Genbank:WP_244893621.1;Name=WP_244893621.1;Ontology_term=GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003673496.1;locus_tag=LP088_RS09105;product=phosphoribosylformylglycinamidine synthase;protein_id=WP_244893621.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1758513 1759181 . + . ID=gene-LP088_RS09110;Name=LP088_RS09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09110;old_locus_tag=LP088_09035 NZ_CP087814.1 Protein Homology CDS 1758513 1759181 . + 0 ID=cds-WP_078273096.1;Parent=gene-LP088_RS09110;Dbxref=Genbank:WP_078273096.1;Name=WP_078273096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013108085.1;locus_tag=LP088_RS09110;product=FixH family protein;protein_id=WP_078273096.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1759200 1759985 . + . ID=gene-LP088_RS09115;Name=LP088_RS09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09115;old_locus_tag=LP088_09040 NZ_CP087814.1 Protein Homology CDS 1759200 1759985 . + 0 ID=cds-WP_078273097.1;Parent=gene-LP088_RS09115;Dbxref=Genbank:WP_078273097.1;Name=WP_078273097.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017655.2;locus_tag=LP088_RS09115;product=TraX family protein;protein_id=WP_078273097.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1760324 1760470 . + . ID=gene-LP088_RS09120;Name=LP088_RS09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09120;old_locus_tag=LP088_09045 NZ_CP087814.1 GeneMarkS-2+ CDS 1760324 1760470 . + 0 ID=cds-WP_264675902.1;Parent=gene-LP088_RS09120;Dbxref=Genbank:WP_264675902.1;Name=WP_264675902.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS09120;product=hypothetical protein;protein_id=WP_264675902.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1760494 1760892 . + . ID=gene-LP088_RS09125;Name=LP088_RS09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09125;old_locus_tag=LP088_09050 NZ_CP087814.1 GeneMarkS-2+ CDS 1760494 1760892 . + 0 ID=cds-WP_264675903.1;Parent=gene-LP088_RS09125;Dbxref=Genbank:WP_264675903.1;Name=WP_264675903.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS09125;product=hypothetical protein;protein_id=WP_264675903.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1760952 1762142 . - . ID=gene-LP088_RS09130;Name=LP088_RS09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09130;old_locus_tag=LP088_09055 NZ_CP087814.1 Protein Homology CDS 1760952 1762142 . - 0 ID=cds-WP_264690315.1;Parent=gene-LP088_RS09130;Dbxref=Genbank:WP_264690315.1;Name=WP_264690315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198351.1;locus_tag=LP088_RS09130;product=hemolysin family protein;protein_id=WP_264690315.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1762381 1762698 . + . ID=gene-LP088_RS09135;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=LP088_RS09135;old_locus_tag=LP088_09060 NZ_CP087814.1 Protein Homology CDS 1762381 1762698 . + 0 ID=cds-WP_029102065.1;Parent=gene-LP088_RS09135;Dbxref=Genbank:WP_029102065.1;Name=WP_029102065.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003673874.1;locus_tag=LP088_RS09135;product=preprotein translocase subunit YajC;protein_id=WP_029102065.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1762879 1764753 . + . ID=gene-LP088_RS09140;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=LP088_RS09140;old_locus_tag=LP088_09065 NZ_CP087814.1 Protein Homology CDS 1762879 1764753 . + 0 ID=cds-WP_112742433.1;Parent=gene-LP088_RS09140;Dbxref=Genbank:WP_112742433.1;Name=WP_112742433.1;Ontology_term=GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003658056.1;locus_tag=LP088_RS09140;product=protein translocase subunit SecD;protein_id=WP_112742433.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1764763 1765890 . + . ID=gene-LP088_RS09145;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=LP088_RS09145;old_locus_tag=LP088_09070 NZ_CP087814.1 Protein Homology CDS 1764763 1765890 . + 0 ID=cds-WP_112742434.1;Parent=gene-LP088_RS09145;Dbxref=Genbank:WP_112742434.1;Name=WP_112742434.1;Ontology_term=GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003658054.1;locus_tag=LP088_RS09145;product=protein translocase subunit SecF;protein_id=WP_112742434.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1766008 1767381 . - . ID=gene-LP088_RS09150;Name=cysG;gbkey=Gene;gene=cysG;gene_biotype=protein_coding;locus_tag=LP088_RS09150;old_locus_tag=LP088_09075 NZ_CP087814.1 Protein Homology CDS 1766008 1767381 . - 0 ID=cds-WP_112742435.1;Parent=gene-LP088_RS09150;Dbxref=Genbank:WP_112742435.1;Name=WP_112742435.1;Ontology_term=GO:0019354,GO:0004851,GO:0043115,GO:0051266,GO:0051287;gbkey=CDS;gene=cysG;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA,precorrin-2 dehydrogenase activity|0043115||IEA,sirohydrochlorin ferrochelatase activity|0051266||IEA,NAD binding|0051287||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004463033.1;locus_tag=LP088_RS09150;product=siroheme synthase CysG;protein_id=WP_112742435.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1767528 1768439 . - . ID=gene-LP088_RS09155;Name=LP088_RS09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09155;old_locus_tag=LP088_09080 NZ_CP087814.1 Protein Homology CDS 1767528 1768439 . - 0 ID=cds-WP_078275357.1-5;Parent=gene-LP088_RS09155;Dbxref=Genbank:WP_078275357.1;Name=WP_078275357.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004282326.1;locus_tag=LP088_RS09155;product=IS982 family transposase;protein_id=WP_078275357.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1768546 1769202 . - . ID=gene-LP088_RS09160;Name=LP088_RS09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09160;old_locus_tag=LP088_09085 NZ_CP087814.1 Protein Homology CDS 1768546 1769202 . - 0 ID=cds-WP_228157696.1;Parent=gene-LP088_RS09160;Dbxref=Genbank:WP_228157696.1;Name=WP_228157696.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007115334.1;locus_tag=LP088_RS09160;product=phosphoadenosine phosphosulfate reductase family protein;protein_id=WP_228157696.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1769440 1769967 . - . ID=gene-LP088_RS09165;Name=LP088_RS09165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09165;old_locus_tag=LP088_09090 NZ_CP087814.1 Protein Homology CDS 1769440 1769967 . - 0 ID=cds-WP_264690316.1;Parent=gene-LP088_RS09165;Dbxref=Genbank:WP_264690316.1;Name=WP_264690316.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017849.2;locus_tag=LP088_RS09165;product=DUF934 domain-containing protein;protein_id=WP_264690316.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1769981 1771660 . - . ID=gene-LP088_RS09170;Name=LP088_RS09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09170;old_locus_tag=LP088_09095 NZ_CP087814.1 Protein Homology CDS 1769981 1771660 . - 0 ID=cds-WP_112742437.1;Parent=gene-LP088_RS09170;Dbxref=Genbank:WP_112742437.1;Name=WP_112742437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513725.1;locus_tag=LP088_RS09170;product=nitrite/sulfite reductase;protein_id=WP_112742437.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1771816 1772001 . + . ID=gene-LP088_RS09175;Name=LP088_RS09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09175;old_locus_tag=LP088_09100 NZ_CP087814.1 GeneMarkS-2+ CDS 1771816 1772001 . + 0 ID=cds-WP_112742438.1;Parent=gene-LP088_RS09175;Dbxref=Genbank:WP_112742438.1;Name=WP_112742438.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS09175;product=hypothetical protein;protein_id=WP_112742438.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1772100 1772336 . + . ID=gene-LP088_RS09180;Name=LP088_RS09180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09180;old_locus_tag=LP088_09105 NZ_CP087814.1 GeneMarkS-2+ CDS 1772100 1772336 . + 0 ID=cds-WP_112742439.1;Parent=gene-LP088_RS09180;Dbxref=Genbank:WP_112742439.1;Name=WP_112742439.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS09180;product=hypothetical protein;protein_id=WP_112742439.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1772473 1772685 . + . ID=gene-LP088_RS09185;Name=LP088_RS09185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09185;old_locus_tag=LP088_09110 NZ_CP087814.1 GeneMarkS-2+ CDS 1772473 1772685 . + 0 ID=cds-WP_112742440.1;Parent=gene-LP088_RS09185;Dbxref=Genbank:WP_112742440.1;Name=WP_112742440.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS09185;product=hypothetical protein;protein_id=WP_112742440.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1772729 1774021 . - . ID=gene-LP088_RS09190;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=LP088_RS09190;old_locus_tag=LP088_09115 NZ_CP087814.1 Protein Homology CDS 1772729 1774021 . - 0 ID=cds-WP_112742441.1;Parent=gene-LP088_RS09190;Dbxref=Genbank:WP_112742441.1;Name=WP_112742441.1;Ontology_term=GO:0015803,GO:0015658;gbkey=CDS;gene=brnQ;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: protein motif:HMM:NF017347.2;locus_tag=LP088_RS09190;product=branched-chain amino acid transport system II carrier protein;protein_id=WP_112742441.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1774210 1774914 . + . ID=gene-LP088_RS09195;Name=LP088_RS09195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09195;old_locus_tag=LP088_09120 NZ_CP087814.1 GeneMarkS-2+ CDS 1774210 1774914 . + 0 ID=cds-WP_264675905.1;Parent=gene-LP088_RS09195;Dbxref=Genbank:WP_264675905.1;Name=WP_264675905.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS09195;product=hypothetical protein;protein_id=WP_264675905.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1774962 1776623 . - . ID=gene-LP088_RS09200;Name=LP088_RS09200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09200;old_locus_tag=LP088_09125 NZ_CP087814.1 Protein Homology CDS 1774962 1776623 . - 0 ID=cds-WP_112742442.1;Parent=gene-LP088_RS09200;Dbxref=Genbank:WP_112742442.1;Name=WP_112742442.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013117.2;locus_tag=LP088_RS09200;product=mechanosensitive ion channel family protein;protein_id=WP_112742442.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1776991 1778370 . + . ID=gene-LP088_RS09205;Name=ahcY;gbkey=Gene;gene=ahcY;gene_biotype=protein_coding;locus_tag=LP088_RS09205;old_locus_tag=LP088_09130 NZ_CP087814.1 Protein Homology CDS 1776991 1778370 . + 0 ID=cds-WP_112742443.1;Parent=gene-LP088_RS09205;Dbxref=Genbank:WP_112742443.1;Name=WP_112742443.1;Ontology_term=GO:0006730,GO:0004013;gbkey=CDS;gene=ahcY;go_function=adenosylhomocysteinase activity|0004013||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004996095.1;locus_tag=LP088_RS09205;product=adenosylhomocysteinase;protein_id=WP_112742443.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1778464 1780149 . + . ID=gene-LP088_RS09210;Name=msrAB;gbkey=Gene;gene=msrAB;gene_biotype=protein_coding;locus_tag=LP088_RS09210;old_locus_tag=LP088_09135 NZ_CP087814.1 Protein Homology CDS 1778464 1780149 . + 0 ID=cds-WP_078273112.1;Parent=gene-LP088_RS09210;Dbxref=Genbank:WP_078273112.1;Name=WP_078273112.1;gbkey=CDS;gene=msrAB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513425.1;locus_tag=LP088_RS09210;product=bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_078273112.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1780533 1781060 . - . ID=gene-LP088_RS09215;Name=LP088_RS09215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09215;old_locus_tag=LP088_09140 NZ_CP087814.1 Protein Homology CDS 1780533 1781060 . - 0 ID=cds-WP_112742445.1;Parent=gene-LP088_RS09215;Dbxref=Genbank:WP_112742445.1;Name=WP_112742445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520537.1;locus_tag=LP088_RS09215;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_112742445.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1781382 1782320 . - . ID=gene-LP088_RS09220;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=LP088_RS09220;old_locus_tag=LP088_09145 NZ_CP087814.1 Protein Homology CDS 1781382 1782320 . - 0 ID=cds-WP_112742446.1;Parent=gene-LP088_RS09220;Dbxref=Genbank:WP_112742446.1;Name=WP_112742446.1;Ontology_term=GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003658200.1;locus_tag=LP088_RS09220;product=signal recognition particle-docking protein FtsY;protein_id=WP_112742446.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1782490 1783521 . + . ID=gene-LP088_RS09225;Name=LP088_RS09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09225;old_locus_tag=LP088_09150 NZ_CP087814.1 Protein Homology CDS 1782490 1783521 . + 0 ID=cds-WP_112742447.1;Parent=gene-LP088_RS09225;Dbxref=Genbank:WP_112742447.1;Name=WP_112742447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520236.1;locus_tag=LP088_RS09225;product=ABC transporter substrate-binding protein;protein_id=WP_112742447.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1783566 1785842 . - . ID=gene-LP088_RS09230;Name=LP088_RS09230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09230;old_locus_tag=LP088_09155 NZ_CP087814.1 Protein Homology CDS 1783566 1785842 . - 0 ID=cds-WP_112742448.1;Parent=gene-LP088_RS09230;Dbxref=Genbank:WP_112742448.1;Name=WP_112742448.1;Ontology_term=GO:0006260,GO:0032508,GO:0003678;gbkey=CDS;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA,DNA duplex unwinding|0032508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201438.1;locus_tag=LP088_RS09230;product=primosomal protein N';protein_id=WP_112742448.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1786047 1786427 . - . ID=gene-LP088_RS09235;Name=LP088_RS09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09235;old_locus_tag=LP088_09160 NZ_CP087814.1 Protein Homology CDS 1786047 1786427 . - 0 ID=cds-WP_078273117.1;Parent=gene-LP088_RS09235;Dbxref=Genbank:WP_078273117.1;Name=WP_078273117.1;Ontology_term=GO:0008152,GO:0019239;gbkey=CDS;go_function=deaminase activity|0019239||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280987.1;locus_tag=LP088_RS09235;product=Rid family detoxifying hydrolase;protein_id=WP_078273117.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1786517 1786702 . - . ID=gene-LP088_RS09240;Name=LP088_RS09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09240;old_locus_tag=LP088_09165 NZ_CP087814.1 Protein Homology CDS 1786517 1786702 . - 0 ID=cds-WP_078273118.1;Parent=gene-LP088_RS09240;Dbxref=Genbank:WP_078273118.1;Name=WP_078273118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003662721.1;locus_tag=LP088_RS09240;product=hypothetical protein;protein_id=WP_078273118.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1786854 1787636 . + . ID=gene-LP088_RS09245;Name=LP088_RS09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09245;old_locus_tag=LP088_09170 NZ_CP087814.1 Protein Homology CDS 1786854 1787636 . + 0 ID=cds-WP_078273119.1;Parent=gene-LP088_RS09245;Dbxref=Genbank:WP_078273119.1;Name=WP_078273119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004639486.1;locus_tag=LP088_RS09245;product=M48 family metallopeptidase;protein_id=WP_078273119.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1787712 1789910 . - . ID=gene-LP088_RS09250;Name=LP088_RS09250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09250;old_locus_tag=LP088_09175 NZ_CP087814.1 Protein Homology CDS 1787712 1789910 . - 0 ID=cds-WP_112742449.1;Parent=gene-LP088_RS09250;Dbxref=Genbank:WP_112742449.1;Name=WP_112742449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280986.1;locus_tag=LP088_RS09250;product=HD domain-containing protein;protein_id=WP_112742449.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1790360 1790620 . - . ID=gene-LP088_RS09255;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=LP088_RS09255;old_locus_tag=LP088_09180 NZ_CP087814.1 Protein Homology CDS 1790360 1790620 . - 0 ID=cds-WP_051225765.1;Parent=gene-LP088_RS09255;Dbxref=Genbank:WP_051225765.1;Name=WP_051225765.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoZ;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004923811.1;locus_tag=LP088_RS09255;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_051225765.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1790707 1791339 . - . ID=gene-LP088_RS09260;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=LP088_RS09260;old_locus_tag=LP088_09185 NZ_CP087814.1 Protein Homology CDS 1790707 1791339 . - 0 ID=cds-WP_112742450.1;Parent=gene-LP088_RS09260;Dbxref=Genbank:WP_112742450.1;Name=WP_112742450.1;Ontology_term=GO:0015949,GO:0004385;gbkey=CDS;gene=gmk;go_function=guanylate kinase activity|0004385||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009501654.1;locus_tag=LP088_RS09260;product=guanylate kinase;protein_id=WP_112742450.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1791454 1792386 . + . ID=gene-LP088_RS09265;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=LP088_RS09265;old_locus_tag=LP088_09190 NZ_CP087814.1 Protein Homology CDS 1791454 1792386 . + 0 ID=cds-WP_029102094.1;Parent=gene-LP088_RS09265;Dbxref=Genbank:WP_029102094.1;Name=WP_029102094.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201433.1;locus_tag=LP088_RS09265;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_029102094.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1792536 1792706 . + . ID=gene-LP088_RS09270;Name=LP088_RS09270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09270;old_locus_tag=LP088_09195 NZ_CP087814.1 GeneMarkS-2+ CDS 1792536 1792706 . + 0 ID=cds-WP_158079585.1;Parent=gene-LP088_RS09270;Dbxref=Genbank:WP_158079585.1;Name=WP_158079585.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS09270;product=hypothetical protein;protein_id=WP_158079585.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1792720 1794096 . - . ID=gene-LP088_RS09275;Name=LP088_RS09275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09275;old_locus_tag=LP088_09200 NZ_CP087814.1 Protein Homology CDS 1792720 1794096 . - 0 ID=cds-WP_078273123.1;Parent=gene-LP088_RS09275;Dbxref=Genbank:WP_078273123.1;Name=WP_078273123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004922247.1;locus_tag=LP088_RS09275;product=wax ester/triacylglycerol synthase family O-acyltransferase;protein_id=WP_078273123.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1794544 1795896 . - . ID=gene-LP088_RS09280;Name=argG;gbkey=Gene;gene=argG;gene_biotype=protein_coding;locus_tag=LP088_RS09280;old_locus_tag=LP088_09205 NZ_CP087814.1 Protein Homology CDS 1794544 1795896 . - 0 ID=cds-WP_181879618.1;Parent=gene-LP088_RS09280;Dbxref=Genbank:WP_181879618.1;Name=WP_181879618.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524,GO:0042803;gbkey=CDS;gene=argG;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004994615.1;locus_tag=LP088_RS09280;product=argininosuccinate synthase;protein_id=WP_181879618.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1796091 1796582 . + . ID=gene-LP088_RS09285;Name=LP088_RS09285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09285;old_locus_tag=LP088_09210 NZ_CP087814.1 Protein Homology CDS 1796091 1796582 . + 0 ID=cds-WP_078273125.1;Parent=gene-LP088_RS09285;Dbxref=Genbank:WP_078273125.1;Name=WP_078273125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657550.1;locus_tag=LP088_RS09285;product=L%2CD-transpeptidase;protein_id=WP_078273125.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1796625 1796942 . + . ID=gene-LP088_RS09290;Name=LP088_RS09290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09290;old_locus_tag=LP088_09215 NZ_CP087814.1 GeneMarkS-2+ CDS 1796625 1796942 . + 0 ID=cds-WP_078273126.1;Parent=gene-LP088_RS09290;Dbxref=Genbank:WP_078273126.1;Name=WP_078273126.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS09290;product=hypothetical protein;protein_id=WP_078273126.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1796967 1797935 . + . ID=gene-LP088_RS09295;Name=LP088_RS09295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09295;old_locus_tag=LP088_09220 NZ_CP087814.1 Protein Homology CDS 1796967 1797935 . + 0 ID=cds-WP_078273127.1;Parent=gene-LP088_RS09295;Dbxref=Genbank:WP_078273127.1;Name=WP_078273127.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016655319.1;locus_tag=LP088_RS09295;product=LysR family transcriptional regulator;protein_id=WP_078273127.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1798138 1798214 . - . ID=gene-LP088_RS09300;Name=LP088_RS09300;gbkey=Gene;gene_biotype=tRNA;locus_tag=LP088_RS09300;old_locus_tag=LP088_09225 NZ_CP087814.1 tRNAscan-SE tRNA 1798138 1798214 . - . ID=rna-LP088_RS09300;Parent=gene-LP088_RS09300;anticodon=(pos:complement(1798178..1798180));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS09300;product=tRNA-Asp NZ_CP087814.1 tRNAscan-SE exon 1798138 1798214 . - . ID=exon-LP088_RS09300-1;Parent=rna-LP088_RS09300;anticodon=(pos:complement(1798178..1798180));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS09300;product=tRNA-Asp NZ_CP087814.1 RefSeq gene 1798254 1798329 . - . ID=gene-LP088_RS09305;Name=LP088_RS09305;gbkey=Gene;gene_biotype=tRNA;locus_tag=LP088_RS09305;old_locus_tag=LP088_09230 NZ_CP087814.1 tRNAscan-SE tRNA 1798254 1798329 . - . ID=rna-LP088_RS09305;Parent=gene-LP088_RS09305;anticodon=(pos:complement(1798294..1798296));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS09305;product=tRNA-Val NZ_CP087814.1 tRNAscan-SE exon 1798254 1798329 . - . ID=exon-LP088_RS09305-1;Parent=rna-LP088_RS09305;anticodon=(pos:complement(1798294..1798296));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS09305;product=tRNA-Val NZ_CP087814.1 RefSeq gene 1798533 1799249 . - . ID=gene-LP088_RS09310;Name=LP088_RS09310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09310;old_locus_tag=LP088_09235 NZ_CP087814.1 Protein Homology CDS 1798533 1799249 . - 0 ID=cds-WP_078273128.1;Parent=gene-LP088_RS09310;Dbxref=Genbank:WP_078273128.1;Name=WP_078273128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003659980.1;locus_tag=LP088_RS09310;product=nucleotidyltransferase family protein;protein_id=WP_078273128.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1799390 1800415 . - . ID=gene-LP088_RS09315;Name=LP088_RS09315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09315;old_locus_tag=LP088_09240 NZ_CP087814.1 Protein Homology CDS 1799390 1800415 . - 0 ID=cds-WP_112742452.1;Parent=gene-LP088_RS09315;Dbxref=Genbank:WP_112742452.1;Name=WP_112742452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003673908.1;locus_tag=LP088_RS09315;product=phosphotransferase;protein_id=WP_112742452.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1800868 1803831 . + . ID=gene-LP088_RS09320;Name=lptD;gbkey=Gene;gene=lptD;gene_biotype=protein_coding;locus_tag=LP088_RS09320;old_locus_tag=LP088_09245 NZ_CP087814.1 Protein Homology CDS 1800868 1803831 . + 0 ID=cds-WP_228157697.1;Parent=gene-LP088_RS09320;Dbxref=Genbank:WP_228157697.1;Name=WP_228157697.1;Ontology_term=GO:0010033,GO:0061024,GO:0019867;gbkey=CDS;gene=lptD;go_component=outer membrane|0019867||IEA;go_process=response to organic substance|0010033||IEA,membrane organization|0061024||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003669513.1;locus_tag=LP088_RS09320;product=LPS assembly protein LptD;protein_id=WP_228157697.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1803918 1804907 . + . ID=gene-LP088_RS09325;Name=LP088_RS09325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09325;old_locus_tag=LP088_09250 NZ_CP087814.1 Protein Homology CDS 1803918 1804907 . + 0 ID=cds-WP_264690317.1;Parent=gene-LP088_RS09325;Dbxref=Genbank:WP_264690317.1;Name=WP_264690317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011960972.1;locus_tag=LP088_RS09325;product=peptidylprolyl isomerase;protein_id=WP_264690317.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1805153 1808551 . + . ID=gene-LP088_RS09330;Name=LP088_RS09330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09330;old_locus_tag=LP088_09255 NZ_CP087814.1 Protein Homology CDS 1805153 1808551 . + 0 ID=cds-WP_264689941.1;Parent=gene-LP088_RS09330;Dbxref=Genbank:WP_264689941.1;Name=WP_264689941.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015737.2;locus_tag=LP088_RS09330;product=autotransporter domain-containing protein;protein_id=WP_264689941.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1809062 1810144 . - . ID=gene-LP088_RS09335;Name=ccoP;gbkey=Gene;gene=ccoP;gene_biotype=protein_coding;locus_tag=LP088_RS09335;old_locus_tag=LP088_09260 NZ_CP087814.1 Protein Homology CDS 1809062 1810144 . - 0 ID=cds-WP_078273131.1;Parent=gene-LP088_RS09335;Dbxref=Genbank:WP_078273131.1;Name=WP_078273131.1;Ontology_term=GO:0004129;gbkey=CDS;gene=ccoP;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657540.1;locus_tag=LP088_RS09335;product=cytochrome-c oxidase%2C cbb3-type subunit III;protein_id=WP_078273131.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1810141 1810320 . - . ID=gene-LP088_RS09340;Name=LP088_RS09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09340;old_locus_tag=LP088_09265 NZ_CP087814.1 Protein Homology CDS 1810141 1810320 . - 0 ID=cds-WP_078273132.1;Parent=gene-LP088_RS09340;Dbxref=Genbank:WP_078273132.1;Name=WP_078273132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657541.1;locus_tag=LP088_RS09340;product=cbb3-type cytochrome c oxidase subunit 3;protein_id=WP_078273132.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1810320 1810958 . - . ID=gene-LP088_RS09345;Name=ccoO;gbkey=Gene;gene=ccoO;gene_biotype=protein_coding;locus_tag=LP088_RS09345;old_locus_tag=LP088_09270 NZ_CP087814.1 Protein Homology CDS 1810320 1810958 . - 0 ID=cds-WP_264675907.1;Parent=gene-LP088_RS09345;Dbxref=Genbank:WP_264675907.1;Name=WP_264675907.1;Ontology_term=GO:0004129;gbkey=CDS;gene=ccoO;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657543.1;locus_tag=LP088_RS09345;product=cytochrome-c oxidase%2C cbb3-type subunit II;protein_id=WP_264675907.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1810970 1812460 . - . ID=gene-LP088_RS09350;Name=ccoN;gbkey=Gene;gene=ccoN;gene_biotype=protein_coding;locus_tag=LP088_RS09350;old_locus_tag=LP088_09275 NZ_CP087814.1 Protein Homology CDS 1810970 1812460 . - 0 ID=cds-WP_078273134.1;Parent=gene-LP088_RS09350;Dbxref=Genbank:WP_078273134.1;Name=WP_078273134.1;Ontology_term=GO:0004129;gbkey=CDS;gene=ccoN;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657544.1;locus_tag=LP088_RS09350;product=cytochrome-c oxidase%2C cbb3-type subunit I;protein_id=WP_078273134.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1813076 1813459 . + . ID=gene-LP088_RS09355;Name=LP088_RS09355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09355;old_locus_tag=LP088_09280 NZ_CP087814.1 Protein Homology CDS 1813076 1813459 . + 0 ID=cds-WP_078273135.1;Parent=gene-LP088_RS09355;Dbxref=Genbank:WP_078273135.1;Name=WP_078273135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657546.1;locus_tag=LP088_RS09355;product=SCP2 sterol-binding domain-containing protein;protein_id=WP_078273135.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1813535 1814455 . - . ID=gene-LP088_RS09360;Name=LP088_RS09360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09360;old_locus_tag=LP088_09285 NZ_CP087814.1 Protein Homology CDS 1813535 1814455 . - 0 ID=cds-WP_078273136.1;Parent=gene-LP088_RS09360;Dbxref=Genbank:WP_078273136.1;Name=WP_078273136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019518896.1;locus_tag=LP088_RS09360;product=OmpA family protein;protein_id=WP_078273136.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1814532 1822058 . - . ID=gene-LP088_RS09365;Name=LP088_RS09365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09365;old_locus_tag=LP088_09290 NZ_CP087814.1 Protein Homology CDS 1814532 1822058 . - 0 ID=cds-WP_078273137.1;Parent=gene-LP088_RS09365;Dbxref=Genbank:WP_078273137.1;Name=WP_078273137.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015831.2;locus_tag=LP088_RS09365;product=YadA-like family protein;protein_id=WP_078273137.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1822883 1824232 . + . ID=gene-LP088_RS09370;Name=ccoG;gbkey=Gene;gene=ccoG;gene_biotype=protein_coding;locus_tag=LP088_RS09370;old_locus_tag=LP088_09295 NZ_CP087814.1 Protein Homology CDS 1822883 1824232 . + 0 ID=cds-WP_078273162.1;Parent=gene-LP088_RS09370;Dbxref=Genbank:WP_078273162.1;Name=WP_078273162.1;Ontology_term=GO:0008535,GO:0003674;gbkey=CDS;gene=ccoG;go_function=molecular_function|0003674||IEA;go_process=respiratory chain complex IV assembly|0008535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003674024.1;locus_tag=LP088_RS09370;product=cytochrome c oxidase accessory protein CcoG;protein_id=WP_078273162.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1824736 1826439 . - . ID=gene-LP088_RS09375;Name=LP088_RS09375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09375;old_locus_tag=LP088_09300 NZ_CP087814.1 Protein Homology CDS 1824736 1826439 . - 0 ID=cds-WP_112742455.1;Parent=gene-LP088_RS09375;Dbxref=Genbank:WP_112742455.1;Name=WP_112742455.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657944.1;locus_tag=LP088_RS09375;product=ATP-binding cassette domain-containing protein;protein_id=WP_112742455.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1826432 1828252 . - . ID=gene-LP088_RS09380;Name=cydD;gbkey=Gene;gene=cydD;gene_biotype=protein_coding;locus_tag=LP088_RS09380;old_locus_tag=LP088_09305 NZ_CP087814.1 Protein Homology CDS 1826432 1828252 . - 0 ID=cds-WP_112742456.1;Parent=gene-LP088_RS09380;Dbxref=Genbank:WP_112742456.1;Name=WP_112742456.1;Ontology_term=GO:0033228,GO:0005524,GO:0033230,GO:0005886,GO:0055051;gbkey=CDS;gene=cydD;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C integrated substrate binding|0055051||IEA;go_function=ATP binding|0005524||IEA,ABC-type cysteine transporter activity|0033230||IEA;go_process=cysteine export across plasma membrane|0033228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003673177.1;locus_tag=LP088_RS09380;product=thiol reductant ABC exporter subunit CydD;protein_id=WP_112742456.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1828357 1828845 . - . ID=gene-LP088_RS09385;Name=LP088_RS09385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09385;old_locus_tag=LP088_09310 NZ_CP087814.1 GeneMarkS-2+ CDS 1828357 1828845 . - 0 ID=cds-WP_078273139.1;Parent=gene-LP088_RS09385;Dbxref=Genbank:WP_078273139.1;Name=WP_078273139.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS09385;product=hypothetical protein;protein_id=WP_078273139.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1828826 1829107 . - . ID=gene-LP088_RS09390;Name=LP088_RS09390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09390;old_locus_tag=LP088_09315 NZ_CP087814.1 GeneMarkS-2+ CDS 1828826 1829107 . - 0 ID=cds-WP_078273140.1;Parent=gene-LP088_RS09390;Dbxref=Genbank:WP_078273140.1;Name=WP_078273140.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS09390;product=hypothetical protein;protein_id=WP_078273140.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1829162 1831087 . - . ID=gene-LP088_RS09395;Name=LP088_RS09395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09395;old_locus_tag=LP088_09320 NZ_CP087814.1 Protein Homology CDS 1829162 1831087 . - 0 ID=cds-WP_264676338.1;Parent=gene-LP088_RS09395;Dbxref=Genbank:WP_264676338.1;Name=WP_264676338.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015210.2;locus_tag=LP088_RS09395;product=DUF262 domain-containing HNH endonuclease family protein;protein_id=WP_264676338.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1831245 1832579 . - . ID=gene-LP088_RS09400;Name=LP088_RS09400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09400;old_locus_tag=LP088_09325 NZ_CP087814.1 Protein Homology CDS 1831245 1832579 . - 0 ID=cds-WP_078273142.1;Parent=gene-LP088_RS09400;Dbxref=Genbank:WP_078273142.1;Name=WP_078273142.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015210.2;locus_tag=LP088_RS09400;product=DUF262 domain-containing protein;protein_id=WP_078273142.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1833030 1834421 . - . ID=gene-LP088_RS09405;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=LP088_RS09405;old_locus_tag=LP088_09330 NZ_CP087814.1 Protein Homology CDS 1833030 1834421 . - 0 ID=cds-WP_078273143.1;Parent=gene-LP088_RS09405;Dbxref=Genbank:WP_078273143.1;Name=WP_078273143.1;Ontology_term=GO:0006099,GO:0004333;gbkey=CDS;gene=fumC;go_function=fumarate hydratase activity|0004333||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657941.1;locus_tag=LP088_RS09405;product=class II fumarate hydratase;protein_id=WP_078273143.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1834541 1835104 . + . ID=gene-LP088_RS09410;Name=LP088_RS09410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09410;old_locus_tag=LP088_09335 NZ_CP087814.1 Protein Homology CDS 1834541 1835104 . + 0 ID=cds-WP_078273144.1;Parent=gene-LP088_RS09410;Dbxref=Genbank:WP_078273144.1;Name=WP_078273144.1;Ontology_term=GO:0006730,GO:0030272;gbkey=CDS;go_function=5-formyltetrahydrofolate cyclo-ligase activity|0030272||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003673896.1;locus_tag=LP088_RS09410;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_078273144.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1835217 1836563 . - . ID=gene-LP088_RS09415;Name=LP088_RS09415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09415;old_locus_tag=LP088_09340 NZ_CP087814.1 Protein Homology CDS 1835217 1836563 . - 0 ID=cds-WP_078273145.1;Parent=gene-LP088_RS09415;Dbxref=Genbank:WP_078273145.1;Name=WP_078273145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004692757.1;locus_tag=LP088_RS09415;product=TRAP transporter large permease subunit;protein_id=WP_078273145.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1836822 1837148 . - . ID=gene-LP088_RS09420;Name=LP088_RS09420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09420;old_locus_tag=LP088_09345 NZ_CP087814.1 Protein Homology CDS 1836822 1837148 . - 0 ID=cds-WP_228157850.1;Parent=gene-LP088_RS09420;Dbxref=Genbank:WP_228157850.1;Name=WP_228157850.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04271.1;locus_tag=LP088_RS09420;product=hypothetical protein;protein_id=WP_228157850.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 1837191 1837766 . - . ID=gene-LP088_RS09425;Name=LP088_RS09425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS09425;old_locus_tag=LP088_09350;partial=true;pseudo=true;start_range=.,1837191 NZ_CP087814.1 Protein Homology CDS 1837191 1837766 . - 0 ID=cds-LP088_RS09425;Parent=gene-LP088_RS09425;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014610.2;locus_tag=LP088_RS09425;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1837191;transl_table=11 NZ_CP087814.1 RefSeq gene 1837884 1838249 . - . ID=gene-LP088_RS09430;Name=LP088_RS09430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09430;old_locus_tag=LP088_09355 NZ_CP087814.1 Protein Homology CDS 1837884 1838249 . - 0 ID=cds-WP_208624039.1;Parent=gene-LP088_RS09430;Dbxref=Genbank:WP_208624039.1;Name=WP_208624039.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: protein motif:HMM:NF014923.2;locus_tag=LP088_RS09430;product=THUMP domain-containing protein;protein_id=WP_208624039.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1838363 1838587 . - . ID=gene-LP088_RS09435;Name=LP088_RS09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09435;old_locus_tag=LP088_09360 NZ_CP087814.1 GeneMarkS-2+ CDS 1838363 1838587 . - 0 ID=cds-WP_078273146.1;Parent=gene-LP088_RS09435;Dbxref=Genbank:WP_078273146.1;Name=WP_078273146.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS09435;product=hypothetical protein;protein_id=WP_078273146.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1838718 1839176 . - . ID=gene-LP088_RS09440;Name=LP088_RS09440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09440;old_locus_tag=LP088_09365 NZ_CP087814.1 Protein Homology CDS 1838718 1839176 . - 0 ID=cds-WP_078273147.1;Parent=gene-LP088_RS09440;Dbxref=Genbank:WP_078273147.1;Name=WP_078273147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017391138.1;locus_tag=LP088_RS09440;product=YchJ family protein;protein_id=WP_078273147.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1839176 1841332 . - . ID=gene-LP088_RS09445;Name=ppk1;gbkey=Gene;gene=ppk1;gene_biotype=protein_coding;locus_tag=LP088_RS09445;old_locus_tag=LP088_09370 NZ_CP087814.1 Protein Homology CDS 1839176 1841332 . - 0 ID=cds-WP_078273164.1;Parent=gene-LP088_RS09445;Dbxref=Genbank:WP_078273164.1;Name=WP_078273164.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;gene=ppk1;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004972016.1;locus_tag=LP088_RS09445;product=polyphosphate kinase 1;protein_id=WP_078273164.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1841773 1842204 . + . ID=gene-LP088_RS09450;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=LP088_RS09450;old_locus_tag=LP088_09375 NZ_CP087814.1 Protein Homology CDS 1841773 1842204 . + 0 ID=cds-WP_078273148.1;Parent=gene-LP088_RS09450;Dbxref=Genbank:WP_078273148.1;Name=WP_078273148.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplM;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003673317.1;locus_tag=LP088_RS09450;product=50S ribosomal protein L13;protein_id=WP_078273148.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1842215 1842601 . + . ID=gene-LP088_RS09455;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=LP088_RS09455;old_locus_tag=LP088_09380 NZ_CP087814.1 Protein Homology CDS 1842215 1842601 . + 0 ID=cds-WP_112742458.1;Parent=gene-LP088_RS09455;Dbxref=Genbank:WP_112742458.1;Name=WP_112742458.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1;locus_tag=LP088_RS09455;product=30S ribosomal protein S9;protein_id=WP_112742458.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1843046 1843630 . + . ID=gene-LP088_RS09460;Name=petA;gbkey=Gene;gene=petA;gene_biotype=protein_coding;locus_tag=LP088_RS09460;old_locus_tag=LP088_09385 NZ_CP087814.1 Protein Homology CDS 1843046 1843630 . + 0 ID=cds-WP_078273149.1;Parent=gene-LP088_RS09460;Dbxref=Genbank:WP_078273149.1;Name=WP_078273149.1;Ontology_term=GO:0009060,GO:0008121,GO:0009055,GO:0045275;gbkey=CDS;gene=petA;go_component=respiratory chain complex III|0045275||IEA;go_function=ubiquinol-cytochrome-c reductase activity|0008121||IEA,electron transfer activity|0009055||IEA;go_process=aerobic respiration|0009060||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657575.1;locus_tag=LP088_RS09460;product=ubiquinol-cytochrome c reductase iron-sulfur subunit;protein_id=WP_078273149.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1843654 1844874 . + . ID=gene-LP088_RS09465;Name=LP088_RS09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09465;old_locus_tag=LP088_09390 NZ_CP087814.1 Protein Homology CDS 1843654 1844874 . + 0 ID=cds-WP_029102508.1;Parent=gene-LP088_RS09465;Dbxref=Genbank:WP_029102508.1;Name=WP_029102508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657576.1;locus_tag=LP088_RS09465;product=cytochrome bc complex cytochrome b subunit;protein_id=WP_029102508.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1844874 1845593 . + . ID=gene-LP088_RS09470;Name=LP088_RS09470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09470;old_locus_tag=LP088_09395 NZ_CP087814.1 Protein Homology CDS 1844874 1845593 . + 0 ID=cds-WP_078273150.1;Parent=gene-LP088_RS09470;Dbxref=Genbank:WP_078273150.1;Name=WP_078273150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007393905.1;locus_tag=LP088_RS09470;product=cytochrome c1;protein_id=WP_078273150.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1845708 1846352 . + . ID=gene-LP088_RS09475;Name=LP088_RS09475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09475;old_locus_tag=LP088_09400 NZ_CP087814.1 Protein Homology CDS 1845708 1846352 . + 0 ID=cds-WP_078273151.1;Parent=gene-LP088_RS09475;Dbxref=Genbank:WP_078273151.1;Name=WP_078273151.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003674053.1;locus_tag=LP088_RS09475;product=glutathione S-transferase N-terminal domain-containing protein;protein_id=WP_078273151.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 1846370 1847000 . - . ID=gene-LP088_RS09480;Name=LP088_RS09480;end_range=1847000,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS09480;old_locus_tag=LP088_09405;partial=true;pseudo=true NZ_CP087814.1 Protein Homology CDS 1846370 1847000 . - 0 ID=cds-LP088_RS09480;Parent=gene-LP088_RS09480;Note=programmed frameshift%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=1847000,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611661.1;locus_tag=LP088_RS09480;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_CP087814.1 RefSeq gene 1847186 1847605 . + . ID=gene-LP088_RS09485;Name=LP088_RS09485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09485;old_locus_tag=LP088_09410 NZ_CP087814.1 Protein Homology CDS 1847186 1847605 . + 0 ID=cds-WP_078273541.1;Parent=gene-LP088_RS09485;Dbxref=Genbank:WP_078273541.1;Name=WP_078273541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003667686.1;locus_tag=LP088_RS09485;product=ClpXP protease specificity-enhancing factor SspB;protein_id=WP_078273541.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1847709 1848902 . - . ID=gene-LP088_RS09490;Name=LP088_RS09490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09490;old_locus_tag=LP088_09415 NZ_CP087814.1 GeneMarkS-2+ CDS 1847709 1848902 . - 0 ID=cds-WP_078273542.1;Parent=gene-LP088_RS09490;Dbxref=Genbank:WP_078273542.1;Name=WP_078273542.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS09490;product=hypothetical protein;protein_id=WP_078273542.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1849081 1851150 . + . ID=gene-LP088_RS09495;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=LP088_RS09495;old_locus_tag=LP088_09420 NZ_CP087814.1 Protein Homology CDS 1849081 1851150 . + 0 ID=cds-WP_078273543.1;Parent=gene-LP088_RS09495;Dbxref=Genbank:WP_078273543.1;Name=WP_078273543.1;Ontology_term=GO:0006431,GO:0000166,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=nucleotide binding|0000166||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004998984.1;locus_tag=LP088_RS09495;product=methionine--tRNA ligase;protein_id=WP_078273543.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1851199 1851822 . + . ID=gene-LP088_RS09500;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=LP088_RS09500;old_locus_tag=LP088_09425 NZ_CP087814.1 Protein Homology CDS 1851199 1851822 . + 0 ID=cds-WP_228157698.1;Parent=gene-LP088_RS09500;Dbxref=Genbank:WP_228157698.1;Name=WP_228157698.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: protein motif:HMM:NF002677.0;locus_tag=LP088_RS09500;product=DNA polymerase IV;protein_id=WP_228157698.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1851740 1852279 . + . ID=gene-LP088_RS09505;Name=LP088_RS09505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09505;old_locus_tag=LP088_09430 NZ_CP087814.1 Protein Homology CDS 1851740 1852279 . + 0 ID=cds-WP_228157699.1;Parent=gene-LP088_RS09505;Dbxref=Genbank:WP_228157699.1;Name=WP_228157699.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023227.2;locus_tag=LP088_RS09505;product=hypothetical protein;protein_id=WP_228157699.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1852346 1852825 . - . ID=gene-LP088_RS09510;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=LP088_RS09510;old_locus_tag=LP088_09435 NZ_CP087814.1 Protein Homology CDS 1852346 1852825 . - 0 ID=cds-WP_062498874.1;Parent=gene-LP088_RS09510;Dbxref=Genbank:WP_062498874.1;Name=WP_062498874.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplI;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513369.1;locus_tag=LP088_RS09510;product=50S ribosomal protein L9;protein_id=WP_062498874.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1852839 1853066 . - . ID=gene-LP088_RS09515;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=LP088_RS09515;old_locus_tag=LP088_09440 NZ_CP087814.1 Protein Homology CDS 1852839 1853066 . - 0 ID=cds-WP_003657491.1;Parent=gene-LP088_RS09515;Dbxref=Genbank:WP_003657491.1;Name=WP_003657491.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004995928.1;locus_tag=LP088_RS09515;product=30S ribosomal protein S18;protein_id=WP_003657491.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1853082 1853483 . - . ID=gene-LP088_RS09520;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=LP088_RS09520;old_locus_tag=LP088_09445 NZ_CP087814.1 Protein Homology CDS 1853082 1853483 . - 0 ID=cds-WP_029102499.1;Parent=gene-LP088_RS09520;Dbxref=Genbank:WP_029102499.1;Name=WP_029102499.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011960859.1;locus_tag=LP088_RS09520;product=30S ribosomal protein S6;protein_id=WP_029102499.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1853616 1854122 . - . ID=gene-LP088_RS09525;Name=LP088_RS09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09525;old_locus_tag=LP088_09450 NZ_CP087814.1 GeneMarkS-2+ CDS 1853616 1854122 . - 0 ID=cds-WP_112742460.1;Parent=gene-LP088_RS09525;Dbxref=Genbank:WP_112742460.1;Name=WP_112742460.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS09525;product=hypothetical protein;protein_id=WP_112742460.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1854213 1854533 . - . ID=gene-LP088_RS09530;Name=LP088_RS09530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09530;old_locus_tag=LP088_09455 NZ_CP087814.1 Protein Homology CDS 1854213 1854533 . - 0 ID=cds-WP_029102497.1;Parent=gene-LP088_RS09530;Dbxref=Genbank:WP_029102497.1;Name=WP_029102497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013108069.1;locus_tag=LP088_RS09530;product=YcgL domain-containing protein;protein_id=WP_029102497.1;transl_table=11 NZ_CP087814.1 cmsearch riboswitch 1854787 1854926 . + . ID=id-NZ_CP087814.1:1854787..1854926;Dbxref=RFAM:RF00504;Note=glycine riboswitch;bound_moiety=glycine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP087814.1 cmsearch riboswitch 1854950 1855056 . + . ID=id-NZ_CP087814.1:1854950..1855056;Dbxref=RFAM:RF00504;Note=glycine riboswitch;bound_moiety=glycine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP087814.1 RefSeq gene 1855176 1856273 . + . ID=gene-LP088_RS09535;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=LP088_RS09535;old_locus_tag=LP088_09460 NZ_CP087814.1 Protein Homology CDS 1855176 1856273 . + 0 ID=cds-WP_078273545.1;Parent=gene-LP088_RS09535;Dbxref=Genbank:WP_078273545.1;Name=WP_078273545.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443087.1;locus_tag=LP088_RS09535;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WP_078273545.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1856460 1856840 . + . ID=gene-LP088_RS09540;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=LP088_RS09540;old_locus_tag=LP088_09465 NZ_CP087814.1 Protein Homology CDS 1856460 1856840 . + 0 ID=cds-WP_078273546.1;Parent=gene-LP088_RS09540;Dbxref=Genbank:WP_078273546.1;Name=WP_078273546.1;Ontology_term=GO:0019464,GO:0003824;gbkey=CDS;gene=gcvH;go_function=catalytic activity|0003824||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280078.1;locus_tag=LP088_RS09540;product=glycine cleavage system protein GcvH;protein_id=WP_078273546.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1856952 1858406 . + . ID=gene-LP088_RS09545;Name=LP088_RS09545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09545;old_locus_tag=LP088_09470 NZ_CP087814.1 Protein Homology CDS 1856952 1858406 . + 0 ID=cds-WP_264675908.1;Parent=gene-LP088_RS09545;Dbxref=Genbank:WP_264675908.1;Name=WP_264675908.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015926.2;locus_tag=LP088_RS09545;product=DUF349 domain-containing protein;protein_id=WP_264675908.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1858550 1861393 . + . ID=gene-LP088_RS09550;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=LP088_RS09550;old_locus_tag=LP088_09475 NZ_CP087814.1 Protein Homology CDS 1858550 1861393 . + 0 ID=cds-WP_264675909.1;Parent=gene-LP088_RS09550;Dbxref=Genbank:WP_264675909.1;Name=WP_264675909.1;Ontology_term=GO:0019464,GO:0004375;gbkey=CDS;gene=gcvP;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013108071.1;locus_tag=LP088_RS09550;product=aminomethyl-transferring glycine dehydrogenase;protein_id=WP_264675909.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1861509 1862207 . + . ID=gene-LP088_RS09555;Name=LP088_RS09555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09555;old_locus_tag=LP088_09480 NZ_CP087814.1 GeneMarkS-2+ CDS 1861509 1862207 . + 0 ID=cds-WP_078273549.1;Parent=gene-LP088_RS09555;Dbxref=Genbank:WP_078273549.1;Name=WP_078273549.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS09555;product=hypothetical protein;protein_id=WP_078273549.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1862262 1862501 . + . ID=gene-LP088_RS09560;Name=LP088_RS09560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09560;old_locus_tag=LP088_09485 NZ_CP087814.1 GeneMarkS-2+ CDS 1862262 1862501 . + 0 ID=cds-WP_078273550.1;Parent=gene-LP088_RS09560;Dbxref=Genbank:WP_078273550.1;Name=WP_078273550.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS09560;product=hypothetical protein;protein_id=WP_078273550.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1862501 1862761 . + . ID=gene-LP088_RS09565;Name=LP088_RS09565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09565;old_locus_tag=LP088_09490 NZ_CP087814.1 Protein Homology CDS 1862501 1862761 . + 0 ID=cds-WP_112742462.1;Parent=gene-LP088_RS09565;Dbxref=Genbank:WP_112742462.1;Name=WP_112742462.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012342.2;locus_tag=LP088_RS09565;product=pilin;protein_id=WP_112742462.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1862919 1864112 . + . ID=gene-LP088_RS09570;Name=sat;gbkey=Gene;gene=sat;gene_biotype=protein_coding;locus_tag=LP088_RS09570;old_locus_tag=LP088_09495 NZ_CP087814.1 Protein Homology CDS 1862919 1864112 . + 0 ID=cds-WP_078273614.1;Parent=gene-LP088_RS09570;Dbxref=Genbank:WP_078273614.1;Name=WP_078273614.1;Ontology_term=GO:0004781;gbkey=CDS;gene=sat;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513724.1;locus_tag=LP088_RS09570;product=sulfate adenylyltransferase;protein_id=WP_078273614.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1864160 1864456 . - . ID=gene-LP088_RS09575;Name=LP088_RS09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09575 NZ_CP087814.1 Protein Homology CDS 1864160 1864456 . - 0 ID=cds-WP_264684360.1;Parent=gene-LP088_RS09575;Dbxref=Genbank:WP_264684360.1;Name=WP_264684360.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012707.2;locus_tag=LP088_RS09575;product=transporter substrate-binding domain-containing protein;protein_id=WP_264684360.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1864488 1864997 . - . ID=gene-LP088_RS09580;Name=LP088_RS09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09580 NZ_CP087814.1 Protein Homology CDS 1864488 1864997 . - 0 ID=cds-WP_264684359.1;Parent=gene-LP088_RS09580;Dbxref=Genbank:WP_264684359.1;Name=WP_264684359.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012707.2;locus_tag=LP088_RS09580;product=transporter substrate-binding domain-containing protein;protein_id=WP_264684359.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 1865276 1866066 . + . ID=gene-LP088_RS09585;Name=LP088_RS09585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS09585;old_locus_tag=LP088_09505;pseudo=true NZ_CP087814.1 Protein Homology CDS 1865276 1866066 . + 0 ID=cds-LP088_RS09585;Parent=gene-LP088_RS09585;Note=programmed frameshift%3B internal stop;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105201.1;locus_tag=LP088_RS09585;product=transposase;pseudo=true;transl_table=11 NZ_CP087814.1 RefSeq gene 1866177 1867055 . + . ID=gene-LP088_RS09590;Name=LP088_RS09590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09590;old_locus_tag=LP088_09510 NZ_CP087814.1 Protein Homology CDS 1866177 1867055 . + 0 ID=cds-WP_078273552.1;Parent=gene-LP088_RS09590;Dbxref=Genbank:WP_078273552.1;Name=WP_078273552.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016103.2;locus_tag=LP088_RS09590;product=ChaN family lipoprotein;protein_id=WP_078273552.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1867058 1869325 . + . ID=gene-LP088_RS09595;Name=LP088_RS09595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09595;old_locus_tag=LP088_09515 NZ_CP087814.1 Protein Homology CDS 1867058 1869325 . + 0 ID=cds-WP_264675910.1;Parent=gene-LP088_RS09595;Dbxref=Genbank:WP_264675910.1;Name=WP_264675910.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF014896.2;locus_tag=LP088_RS09595;product=prolyl oligopeptidase family serine peptidase;protein_id=WP_264675910.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1869430 1871682 . + . ID=gene-LP088_RS09600;Name=LP088_RS09600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09600;old_locus_tag=LP088_09520 NZ_CP087814.1 Protein Homology CDS 1869430 1871682 . + 0 ID=cds-WP_078273554.1;Parent=gene-LP088_RS09600;Dbxref=Genbank:WP_078273554.1;Name=WP_078273554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520752.1;locus_tag=LP088_RS09600;product=TonB-dependent receptor;protein_id=WP_078273554.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1871682 1872641 . + . ID=gene-LP088_RS09605;Name=LP088_RS09605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09605;old_locus_tag=LP088_09525 NZ_CP087814.1 Protein Homology CDS 1871682 1872641 . + 0 ID=cds-WP_078273555.1;Parent=gene-LP088_RS09605;Dbxref=Genbank:WP_078273555.1;Name=WP_078273555.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015506.2;locus_tag=LP088_RS09605;product=energy transducer TonB;protein_id=WP_078273555.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1872763 1873890 . + . ID=gene-LP088_RS09610;Name=LP088_RS09610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09610;old_locus_tag=LP088_09530 NZ_CP087814.1 Protein Homology CDS 1872763 1873890 . + 0 ID=cds-WP_112742464.1;Parent=gene-LP088_RS09610;Dbxref=Genbank:WP_112742464.1;Name=WP_112742464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520751.1;locus_tag=LP088_RS09610;product=hemin-degrading factor;protein_id=WP_112742464.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1874016 1874810 . + . ID=gene-LP088_RS09615;Name=LP088_RS09615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09615;old_locus_tag=LP088_09535 NZ_CP087814.1 Protein Homology CDS 1874016 1874810 . + 0 ID=cds-WP_079325380.1;Parent=gene-LP088_RS09615;Dbxref=Genbank:WP_079325380.1;Name=WP_079325380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520750.1;locus_tag=LP088_RS09615;product=ABC transporter substrate-binding protein;protein_id=WP_079325380.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1874833 1875843 . + . ID=gene-LP088_RS09620;Name=LP088_RS09620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09620;old_locus_tag=LP088_09540 NZ_CP087814.1 Protein Homology CDS 1874833 1875843 . + 0 ID=cds-WP_112742832.1;Parent=gene-LP088_RS09620;Dbxref=Genbank:WP_112742832.1;Name=WP_112742832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520749.1;locus_tag=LP088_RS09620;product=iron ABC transporter permease;protein_id=WP_112742832.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1875836 1876597 . + . ID=gene-LP088_RS09625;Name=LP088_RS09625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09625;old_locus_tag=LP088_09545 NZ_CP087814.1 Protein Homology CDS 1875836 1876597 . + 0 ID=cds-WP_112742465.1;Parent=gene-LP088_RS09625;Dbxref=Genbank:WP_112742465.1;Name=WP_112742465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520748.1;locus_tag=LP088_RS09625;product=ABC transporter ATP-binding protein;protein_id=WP_112742465.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 1876728 1877428 . + . ID=gene-LP088_RS09630;Name=LP088_RS09630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS09630;old_locus_tag=LP088_09550;pseudo=true NZ_CP087814.1 Protein Homology CDS 1876728 1877428 . + 0 ID=cds-LP088_RS09630;Parent=gene-LP088_RS09630;Note=frameshifted%3B internal stop;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105201.1;locus_tag=LP088_RS09630;product=transposase;pseudo=true;transl_table=11 NZ_CP087814.1 RefSeq gene 1877753 1878814 . + . ID=gene-LP088_RS09635;Name=LP088_RS09635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09635;old_locus_tag=LP088_09555 NZ_CP087814.1 Protein Homology CDS 1877753 1878814 . + 0 ID=cds-WP_264675911.1;Parent=gene-LP088_RS09635;Dbxref=Genbank:WP_264675911.1;Name=WP_264675911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019672476.1;locus_tag=LP088_RS09635;product=sulfate ABC transporter substrate-binding protein;protein_id=WP_264675911.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1878973 1879869 . + . ID=gene-LP088_RS09640;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=protein_coding;locus_tag=LP088_RS09640;old_locus_tag=LP088_09560 NZ_CP087814.1 Protein Homology CDS 1878973 1879869 . + 0 ID=cds-WP_112742467.1;Parent=gene-LP088_RS09640;Dbxref=Genbank:WP_112742467.1;Name=WP_112742467.1;Ontology_term=GO:0008272,GO:0015419,GO:0005886,GO:0055052;gbkey=CDS;gene=cysT;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transport|0008272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007393530.1;locus_tag=LP088_RS09640;product=sulfate ABC transporter permease subunit CysT;protein_id=WP_112742467.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1880119 1880970 . + . ID=gene-LP088_RS09645;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=LP088_RS09645;old_locus_tag=LP088_09565 NZ_CP087814.1 Protein Homology CDS 1880119 1880970 . + 0 ID=cds-WP_112742468.1;Parent=gene-LP088_RS09645;Dbxref=Genbank:WP_112742468.1;Name=WP_112742468.1;Ontology_term=GO:0008272,GO:0015419,GO:0005886,GO:0055052;gbkey=CDS;gene=cysW;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transport|0008272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003669590.1;locus_tag=LP088_RS09645;product=sulfate ABC transporter permease subunit CysW;protein_id=WP_112742468.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 1881083 1881796 . + . ID=gene-LP088_RS09650;Name=LP088_RS09650;end_range=1881796,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS09650;old_locus_tag=LP088_09570;partial=true;pseudo=true NZ_CP087814.1 Protein Homology CDS 1881083 1881796 . + 0 ID=cds-LP088_RS09650;Parent=gene-LP088_RS09650;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005524;end_range=1881796,.;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016540906.1;locus_tag=LP088_RS09650;partial=true;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11 NZ_CP087814.1 RefSeq gene 1882255 1882908 . - . ID=gene-LP088_RS09655;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=LP088_RS09655;old_locus_tag=LP088_09575 NZ_CP087814.1 Protein Homology CDS 1882255 1882908 . - 0 ID=cds-WP_112742470.1;Parent=gene-LP088_RS09655;Dbxref=Genbank:WP_112742470.1;Name=WP_112742470.1;Ontology_term=GO:0006139,GO:0004017,GO:0005524;gbkey=CDS;gene=adk;go_function=adenylate kinase activity|0004017||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199237.1;locus_tag=LP088_RS09655;product=adenylate kinase;protein_id=WP_112742470.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1882985 1884247 . - . ID=gene-LP088_RS09660;Name=ccmI;gbkey=Gene;gene=ccmI;gene_biotype=protein_coding;locus_tag=LP088_RS09660;old_locus_tag=LP088_09580 NZ_CP087814.1 Protein Homology CDS 1882985 1884247 . - 0 ID=cds-WP_112742471.1;Parent=gene-LP088_RS09660;Dbxref=Genbank:WP_112742471.1;Name=WP_112742471.1;Ontology_term=GO:0017004,GO:0051082;gbkey=CDS;gene=ccmI;go_function=unfolded protein binding|0051082||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013108054.1;locus_tag=LP088_RS09660;product=c-type cytochrome biogenesis protein CcmI;protein_id=WP_112742471.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1884244 1884873 . - . ID=gene-LP088_RS09665;Name=LP088_RS09665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09665;old_locus_tag=LP088_09585 NZ_CP087814.1 Protein Homology CDS 1884244 1884873 . - 0 ID=cds-WP_245952214.1;Parent=gene-LP088_RS09665;Dbxref=Genbank:WP_245952214.1;Name=WP_245952214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514065.1;locus_tag=LP088_RS09665;product=cytochrome c-type biogenesis protein CcmH;protein_id=WP_245952214.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1884810 1885391 . - . ID=gene-LP088_RS09670;Name=LP088_RS09670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09670;old_locus_tag=LP088_09590 NZ_CP087814.1 Protein Homology CDS 1884810 1885391 . - 0 ID=cds-WP_115369326.1;Parent=gene-LP088_RS09670;Dbxref=Genbank:WP_115369326.1;Name=WP_115369326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003660237.1;locus_tag=LP088_RS09670;product=DsbE family thiol:disulfide interchange protein;protein_id=WP_115369326.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1885388 1887553 . - . ID=gene-LP088_RS09675;Name=LP088_RS09675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09675;old_locus_tag=LP088_09595 NZ_CP087814.1 Protein Homology CDS 1885388 1887553 . - 0 ID=cds-WP_115369325.1;Parent=gene-LP088_RS09675;Dbxref=Genbank:WP_115369325.1;Name=WP_115369325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280826.1;locus_tag=LP088_RS09675;product=heme lyase CcmF/NrfE family subunit;protein_id=WP_115369325.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1888101 1889411 . - . ID=gene-LP088_RS09680;Name=LP088_RS09680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09680;old_locus_tag=LP088_09600 NZ_CP087814.1 Protein Homology CDS 1888101 1889411 . - 0 ID=cds-WP_264690318.1;Parent=gene-LP088_RS09680;Dbxref=Genbank:WP_264690318.1;Name=WP_264690318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657451.1;locus_tag=LP088_RS09680;product=hypothetical protein;protein_id=WP_264690318.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1890107 1890676 . + . ID=gene-LP088_RS09685;Name=LP088_RS09685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09685;old_locus_tag=LP088_09605 NZ_CP087814.1 Protein Homology CDS 1890107 1890676 . + 0 ID=cds-WP_112742473.1;Parent=gene-LP088_RS09685;Dbxref=Genbank:WP_112742473.1;Name=WP_112742473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007114965.1;locus_tag=LP088_RS09685;product=lipocalin family protein;protein_id=WP_112742473.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1890908 1891882 . + . ID=gene-LP088_RS09690;Name=LP088_RS09690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09690;old_locus_tag=LP088_09610 NZ_CP087814.1 Protein Homology CDS 1890908 1891882 . + 0 ID=cds-WP_264675912.1;Parent=gene-LP088_RS09690;Dbxref=Genbank:WP_264675912.1;Name=WP_264675912.1;Ontology_term=GO:0004427;gbkey=CDS;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;inference=COORDINATES: protein motif:HMM:NF003877.0;locus_tag=LP088_RS09690;product=manganese-dependent inorganic pyrophosphatase;protein_id=WP_264675912.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1892002 1892526 . - . ID=gene-LP088_RS09695;Name=LP088_RS09695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09695;old_locus_tag=LP088_09615 NZ_CP087814.1 Protein Homology CDS 1892002 1892526 . - 0 ID=cds-WP_112742834.1;Parent=gene-LP088_RS09695;Dbxref=Genbank:WP_112742834.1;Name=WP_112742834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003658356.1;locus_tag=LP088_RS09695;product=hypothetical protein;protein_id=WP_112742834.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1892867 1894873 . + . ID=gene-LP088_RS09700;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=LP088_RS09700;old_locus_tag=LP088_09620 NZ_CP087814.1 Protein Homology CDS 1892867 1894873 . + 0 ID=cds-WP_112742475.1;Parent=gene-LP088_RS09700;Dbxref=Genbank:WP_112742475.1;Name=WP_112742475.1;Ontology_term=GO:0009252,GO:0003824;gbkey=CDS;gene=mrdA;go_function=catalytic activity|0003824||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011960073.1;locus_tag=LP088_RS09700;product=penicillin-binding protein 2;protein_id=WP_112742475.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1894870 1895463 . + . ID=gene-LP088_RS09705;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=LP088_RS09705;old_locus_tag=LP088_09625 NZ_CP087814.1 Protein Homology CDS 1894870 1895463 . + 0 ID=cds-WP_264675913.1;Parent=gene-LP088_RS09705;Dbxref=Genbank:WP_264675913.1;Name=WP_264675913.1;Ontology_term=GO:0031167,GO:0052913;gbkey=CDS;gene=rsmD;go_function=16S rRNA (guanine(966)-N(2))-methyltransferase activity|0052913||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004717268.1;locus_tag=LP088_RS09705;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=WP_264675913.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1895951 1896829 . + . ID=gene-LP088_RS09710;Name=LP088_RS09710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09710;old_locus_tag=LP088_09630 NZ_CP087814.1 Protein Homology CDS 1895951 1896829 . + 0 ID=cds-WP_078273575.1;Parent=gene-LP088_RS09710;Dbxref=Genbank:WP_078273575.1;Name=WP_078273575.1;Ontology_term=GO:0008150,GO:0016740,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=transferase activity|0016740||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: protein motif:HMM:NF014679.2;locus_tag=LP088_RS09710;product=DegV family EDD domain-containing protein;protein_id=WP_078273575.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1897164 1897535 . - . ID=gene-LP088_RS09715;Name=LP088_RS09715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09715;old_locus_tag=LP088_09635 NZ_CP087814.1 Protein Homology CDS 1897164 1897535 . - 0 ID=cds-WP_264690319.1;Parent=gene-LP088_RS09715;Dbxref=Genbank:WP_264690319.1;Name=WP_264690319.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013970.2;locus_tag=LP088_RS09715;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_264690319.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1897544 1897771 . - . ID=gene-LP088_RS09720;Name=LP088_RS09720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09720;old_locus_tag=LP088_09640 NZ_CP087814.1 GeneMarkS-2+ CDS 1897544 1897771 . - 0 ID=cds-WP_078273577.1;Parent=gene-LP088_RS09720;Dbxref=Genbank:WP_078273577.1;Name=WP_078273577.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS09720;product=hypothetical protein;protein_id=WP_078273577.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1897841 1899859 . - . ID=gene-LP088_RS09725;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=LP088_RS09725;old_locus_tag=LP088_09645 NZ_CP087814.1 Protein Homology CDS 1897841 1899859 . - 0 ID=cds-WP_264675914.1;Parent=gene-LP088_RS09725;Dbxref=Genbank:WP_264675914.1;Name=WP_264675914.1;Ontology_term=GO:0006098,GO:0004802,GO:0005737;gbkey=CDS;gene=tkt;go_component=cytoplasm|0005737||IEA;go_function=transketolase activity|0004802||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004786277.1;locus_tag=LP088_RS09725;product=transketolase;protein_id=WP_264675914.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1900104 1900442 . + . ID=gene-LP088_RS09730;Name=LP088_RS09730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09730;old_locus_tag=LP088_09650 NZ_CP087814.1 GeneMarkS-2+ CDS 1900104 1900442 . + 0 ID=cds-WP_147287331.1;Parent=gene-LP088_RS09730;Dbxref=Genbank:WP_147287331.1;Name=WP_147287331.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS09730;product=hypothetical protein;protein_id=WP_147287331.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1900495 1900818 . + . ID=gene-LP088_RS09735;Name=LP088_RS09735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09735;old_locus_tag=LP088_09655 NZ_CP087814.1 GeneMarkS-2+ CDS 1900495 1900818 . + 0 ID=cds-WP_115369316.1;Parent=gene-LP088_RS09735;Dbxref=Genbank:WP_115369316.1;Name=WP_115369316.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS09735;product=hypothetical protein;protein_id=WP_115369316.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 1900887 1901438 . - . ID=gene-LP088_RS09740;Name=LP088_RS09740;end_range=1901438,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS09740;old_locus_tag=LP088_09660;partial=true;pseudo=true NZ_CP087814.1 Protein Homology CDS 1900887 1901438 . - 0 ID=cds-LP088_RS09740;Parent=gene-LP088_RS09740;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1901438,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010111273.1;locus_tag=LP088_RS09740;partial=true;product=RNA 2'-phosphotransferase;pseudo=true;transl_table=11 NZ_CP087814.1 RefSeq gene 1901993 1902115 . - . ID=gene-LP088_RS09745;Name=LP088_RS09745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09745;old_locus_tag=LP088_09665 NZ_CP087814.1 Protein Homology CDS 1901993 1902115 . - 0 ID=cds-WP_244893637.1;Parent=gene-LP088_RS09745;Dbxref=Genbank:WP_244893637.1;Name=WP_244893637.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016268.2;locus_tag=LP088_RS09745;product=BrnT family toxin;protein_id=WP_244893637.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1902112 1902294 . - . ID=gene-LP088_RS09750;Name=LP088_RS09750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09750;old_locus_tag=LP088_09670 NZ_CP087814.1 GeneMarkS-2+ CDS 1902112 1902294 . - 0 ID=cds-WP_244893638.1;Parent=gene-LP088_RS09750;Dbxref=Genbank:WP_244893638.1;Name=WP_244893638.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS09750;product=hypothetical protein;protein_id=WP_244893638.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1902298 1903554 . - . ID=gene-LP088_RS09755;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=LP088_RS09755;old_locus_tag=LP088_09675 NZ_CP087814.1 Protein Homology CDS 1902298 1903554 . - 0 ID=cds-WP_078273581.1;Parent=gene-LP088_RS09755;Dbxref=Genbank:WP_078273581.1;Name=WP_078273581.1;Ontology_term=GO:0006434,GO:0004828,GO:0005737;gbkey=CDS;gene=serS;go_component=cytoplasm|0005737||IEA;go_function=serine-tRNA ligase activity|0004828||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520900.1;locus_tag=LP088_RS09755;product=serine--tRNA ligase;protein_id=WP_078273581.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1903787 1904470 . + . ID=gene-LP088_RS09760;Name=LP088_RS09760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09760;old_locus_tag=LP088_09680 NZ_CP087814.1 Protein Homology CDS 1903787 1904470 . + 0 ID=cds-WP_078273582.1;Parent=gene-LP088_RS09760;Dbxref=Genbank:WP_078273582.1;Name=WP_078273582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444038.1;locus_tag=LP088_RS09760;product=YcxB family protein;protein_id=WP_078273582.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1904721 1904978 . - . ID=gene-LP088_RS09765;Name=LP088_RS09765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09765;old_locus_tag=LP088_09685 NZ_CP087814.1 Protein Homology CDS 1904721 1904978 . - 0 ID=cds-WP_078273583.1;Parent=gene-LP088_RS09765;Dbxref=Genbank:WP_078273583.1;Name=WP_078273583.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015827.2;locus_tag=LP088_RS09765;product=DUF333 domain-containing protein;protein_id=WP_078273583.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1905020 1906138 . - . ID=gene-LP088_RS09770;Name=LP088_RS09770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09770;old_locus_tag=LP088_09690 NZ_CP087814.1 GeneMarkS-2+ CDS 1905020 1906138 . - 0 ID=cds-WP_078273584.1;Parent=gene-LP088_RS09770;Dbxref=Genbank:WP_078273584.1;Name=WP_078273584.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS09770;product=hypothetical protein;protein_id=WP_078273584.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1906135 1906320 . - . ID=gene-LP088_RS09775;Name=LP088_RS09775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09775;old_locus_tag=LP088_09695 NZ_CP087814.1 GeneMarkS-2+ CDS 1906135 1906320 . - 0 ID=cds-WP_112742486.1;Parent=gene-LP088_RS09775;Dbxref=Genbank:WP_112742486.1;Name=WP_112742486.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS09775;product=hypothetical protein;protein_id=WP_112742486.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1906443 1906649 . - . ID=gene-LP088_RS09780;Name=LP088_RS09780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09780;old_locus_tag=LP088_09700 NZ_CP087814.1 GeneMarkS-2+ CDS 1906443 1906649 . - 0 ID=cds-WP_078273586.1;Parent=gene-LP088_RS09780;Dbxref=Genbank:WP_078273586.1;Name=WP_078273586.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS09780;product=hypothetical protein;protein_id=WP_078273586.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1906689 1907153 . - . ID=gene-LP088_RS09785;Name=LP088_RS09785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09785;old_locus_tag=LP088_09705 NZ_CP087814.1 Protein Homology CDS 1906689 1907153 . - 0 ID=cds-WP_078273587.1;Parent=gene-LP088_RS09785;Dbxref=Genbank:WP_078273587.1;Name=WP_078273587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520760.1;locus_tag=LP088_RS09785;product=DUF441 domain-containing protein;protein_id=WP_078273587.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1907198 1908289 . - . ID=gene-LP088_RS09790;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=LP088_RS09790;old_locus_tag=LP088_09710 NZ_CP087814.1 Protein Homology CDS 1907198 1908289 . - 0 ID=cds-WP_078273588.1;Parent=gene-LP088_RS09790;Dbxref=Genbank:WP_078273588.1;Name=WP_078273588.1;Ontology_term=GO:0005525;gbkey=CDS;gene=ychF;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004995132.1;locus_tag=LP088_RS09790;product=redox-regulated ATPase YchF;protein_id=WP_078273588.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 1908624 1913672 . + . ID=gene-LP088_RS09795;Name=LP088_RS09795;end_range=1913672,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS09795;old_locus_tag=LP088_09715;partial=true;pseudo=true NZ_CP087814.1 Protein Homology CDS 1908624 1913672 . + 0 ID=cds-LP088_RS09795;Parent=gene-LP088_RS09795;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1913672,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012196.1;locus_tag=LP088_RS09795;partial=true;product=Ig-like domain-containing protein;pseudo=true;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 1913817 1914212 . + . ID=gene-LP088_RS09800;Name=LP088_RS09800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS09800;old_locus_tag=LP088_09720;partial=true;pseudo=true;start_range=.,1913817 NZ_CP087814.1 Protein Homology CDS 1913817 1914212 . + 0 ID=cds-LP088_RS09800;Parent=gene-LP088_RS09800;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010918632.1;locus_tag=LP088_RS09800;partial=true;product=type I secretion C-terminal target domain-containing protein;pseudo=true;start_range=.,1913817;transl_table=11 NZ_CP087814.1 RefSeq gene 1914526 1914996 . + . ID=gene-LP088_RS09805;Name=LP088_RS09805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09805;old_locus_tag=LP088_09725 NZ_CP087814.1 Protein Homology CDS 1914526 1914996 . + 0 ID=cds-WP_029102466.1;Parent=gene-LP088_RS09805;Dbxref=Genbank:WP_029102466.1;Name=WP_029102466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007395151.1;locus_tag=LP088_RS09805;product=DNA starvation/stationary phase protection protein;protein_id=WP_029102466.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1915090 1915707 . - . ID=gene-LP088_RS09810;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=LP088_RS09810;old_locus_tag=LP088_09730 NZ_CP087814.1 Protein Homology CDS 1915090 1915707 . - 0 ID=cds-WP_029102465.1;Parent=gene-LP088_RS09810;Dbxref=Genbank:WP_029102465.1;Name=WP_029102465.1;Ontology_term=GO:0042559,GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=pteridine-containing compound biosynthetic process|0042559||IEA,tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007393734.1;locus_tag=LP088_RS09810;product=GTP cyclohydrolase I FolE;protein_id=WP_029102465.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1915951 1916763 . + . ID=gene-LP088_RS09815;Name=LP088_RS09815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09815;old_locus_tag=LP088_09735 NZ_CP087814.1 Protein Homology CDS 1915951 1916763 . + 0 ID=cds-WP_112742488.1;Parent=gene-LP088_RS09815;Dbxref=Genbank:WP_112742488.1;Name=WP_112742488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513755.1;locus_tag=LP088_RS09815;product=enoyl-ACP reductase;protein_id=WP_112742488.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1916895 1917605 . + . ID=gene-LP088_RS09820;Name=LP088_RS09820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09820;old_locus_tag=LP088_09740 NZ_CP087814.1 Protein Homology CDS 1916895 1917605 . + 0 ID=cds-WP_078273591.1;Parent=gene-LP088_RS09820;Dbxref=Genbank:WP_078273591.1;Name=WP_078273591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003664326.1;locus_tag=LP088_RS09820;product=DUF1275 domain-containing protein;protein_id=WP_078273591.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1917876 1918484 . - . ID=gene-LP088_RS09825;Name=scpB;gbkey=Gene;gene=scpB;gene_biotype=protein_coding;locus_tag=LP088_RS09825;old_locus_tag=LP088_09745 NZ_CP087814.1 Protein Homology CDS 1917876 1918484 . - 0 ID=cds-WP_078273592.1;Parent=gene-LP088_RS09825;Dbxref=Genbank:WP_078273592.1;Name=WP_078273592.1;Ontology_term=GO:0007059,GO:0005515;gbkey=CDS;gene=scpB;go_function=protein binding|0005515||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009502255.1;locus_tag=LP088_RS09825;product=SMC-Scp complex subunit ScpB;protein_id=WP_078273592.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1918500 1919399 . - . ID=gene-LP088_RS09830;Name=LP088_RS09830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09830;old_locus_tag=LP088_09750 NZ_CP087814.1 Protein Homology CDS 1918500 1919399 . - 0 ID=cds-WP_078273593.1;Parent=gene-LP088_RS09830;Dbxref=Genbank:WP_078273593.1;Name=WP_078273593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003662359.1;locus_tag=LP088_RS09830;product=segregation/condensation protein A;protein_id=WP_078273593.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1919399 1920034 . - . ID=gene-LP088_RS09835;Name=LP088_RS09835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09835;old_locus_tag=LP088_09755 NZ_CP087814.1 Protein Homology CDS 1919399 1920034 . - 0 ID=cds-WP_078273594.1;Parent=gene-LP088_RS09835;Dbxref=Genbank:WP_078273594.1;Name=WP_078273594.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019976.2;locus_tag=LP088_RS09835;product=NERD domain-containing protein;protein_id=WP_078273594.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1920045 1920221 . - . ID=gene-LP088_RS09840;Name=LP088_RS09840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09840;old_locus_tag=LP088_09760 NZ_CP087814.1 GeneMarkS-2+ CDS 1920045 1920221 . - 0 ID=cds-WP_158079611.1;Parent=gene-LP088_RS09840;Dbxref=Genbank:WP_158079611.1;Name=WP_158079611.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS09840;product=hypothetical protein;protein_id=WP_158079611.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1920231 1921280 . - . ID=gene-LP088_RS09845;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=LP088_RS09845;old_locus_tag=LP088_09765 NZ_CP087814.1 Protein Homology CDS 1920231 1921280 . - 0 ID=cds-WP_264675915.1;Parent=gene-LP088_RS09845;Dbxref=Genbank:WP_264675915.1;Name=WP_264675915.1;Ontology_term=GO:0006436,GO:0004830,GO:0005737;gbkey=CDS;gene=trpS;go_component=cytoplasm|0005737||IEA;go_function=tryptophan-tRNA ligase activity|0004830||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009501619.1;locus_tag=LP088_RS09845;product=tryptophan--tRNA ligase;protein_id=WP_264675915.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1921411 1921683 . - . ID=gene-LP088_RS09850;Name=LP088_RS09850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09850;old_locus_tag=LP088_09770 NZ_CP087814.1 GeneMarkS-2+ CDS 1921411 1921683 . - 0 ID=cds-WP_078273596.1;Parent=gene-LP088_RS09850;Dbxref=Genbank:WP_078273596.1;Name=WP_078273596.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS09850;product=hypothetical protein;protein_id=WP_078273596.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1921752 1922732 . - . ID=gene-LP088_RS09855;Name=LP088_RS09855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09855;old_locus_tag=LP088_09775 NZ_CP087814.1 Protein Homology CDS 1921752 1922732 . - 0 ID=cds-WP_244893639.1;Parent=gene-LP088_RS09855;Dbxref=Genbank:WP_244893639.1;Name=WP_244893639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011961165.1;locus_tag=LP088_RS09855;product=lipid A biosynthesis acyltransferase;protein_id=WP_244893639.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1922836 1924779 . - . ID=gene-LP088_RS09860;Name=LP088_RS09860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09860;old_locus_tag=LP088_09780 NZ_CP087814.1 Protein Homology CDS 1922836 1924779 . - 0 ID=cds-WP_264675916.1;Parent=gene-LP088_RS09860;Dbxref=Genbank:WP_264675916.1;Name=WP_264675916.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003673093.1;locus_tag=LP088_RS09860;product=ATP-binding cassette domain-containing protein;protein_id=WP_264675916.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1924858 1925073 . + . ID=gene-LP088_RS09865;Name=LP088_RS09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09865;old_locus_tag=LP088_09785 NZ_CP087814.1 Protein Homology CDS 1924858 1925073 . + 0 ID=cds-WP_078273599.1;Parent=gene-LP088_RS09865;Dbxref=Genbank:WP_078273599.1;Name=WP_078273599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004976120.1;locus_tag=LP088_RS09865;product=SlyX family protein;protein_id=WP_078273599.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1925224 1926135 . + . ID=gene-LP088_RS09870;Name=LP088_RS09870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09870;old_locus_tag=LP088_09790 NZ_CP087814.1 Protein Homology CDS 1925224 1926135 . + 0 ID=cds-WP_078275357.1-6;Parent=gene-LP088_RS09870;Dbxref=Genbank:WP_078275357.1;Name=WP_078275357.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004282326.1;locus_tag=LP088_RS09870;product=IS982 family transposase;protein_id=WP_078275357.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1926383 1927777 . + . ID=gene-LP088_RS09875;Name=LP088_RS09875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09875;old_locus_tag=LP088_09795 NZ_CP087814.1 Protein Homology CDS 1926383 1927777 . + 0 ID=cds-WP_078273600.1;Parent=gene-LP088_RS09875;Dbxref=Genbank:WP_078273600.1;Name=WP_078273600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513905.1;locus_tag=LP088_RS09875;product=outer membrane protein transport protein;protein_id=WP_078273600.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1927889 1928584 . + . ID=gene-LP088_RS09880;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=LP088_RS09880;old_locus_tag=LP088_09800 NZ_CP087814.1 Protein Homology CDS 1927889 1928584 . + 0 ID=cds-WP_078273601.1;Parent=gene-LP088_RS09880;Dbxref=Genbank:WP_078273601.1;Name=WP_078273601.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003659945.1;locus_tag=LP088_RS09880;product=ribulose-phosphate 3-epimerase;protein_id=WP_078273601.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1928600 1928935 . + . ID=gene-LP088_RS09885;Name=LP088_RS09885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09885;old_locus_tag=LP088_09805 NZ_CP087814.1 Protein Homology CDS 1928600 1928935 . + 0 ID=cds-WP_078273602.1;Parent=gene-LP088_RS09885;Dbxref=Genbank:WP_078273602.1;Name=WP_078273602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280975.1;locus_tag=LP088_RS09885;product=hypothetical protein;protein_id=WP_078273602.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1928935 1929258 . + . ID=gene-LP088_RS09890;Name=LP088_RS09890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09890;old_locus_tag=LP088_09810 NZ_CP087814.1 Protein Homology CDS 1928935 1929258 . + 0 ID=cds-WP_078273603.1;Parent=gene-LP088_RS09890;Dbxref=Genbank:WP_078273603.1;Name=WP_078273603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003659938.1;locus_tag=LP088_RS09890;product=hypothetical protein;protein_id=WP_078273603.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1929394 1929870 . + . ID=gene-LP088_RS09895;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=LP088_RS09895;old_locus_tag=LP088_09815 NZ_CP087814.1 Protein Homology CDS 1929394 1929870 . + 0 ID=cds-WP_065256375.1;Parent=gene-LP088_RS09895;Dbxref=Genbank:WP_065256375.1;Name=WP_065256375.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198674.1;locus_tag=LP088_RS09895;product=transcription elongation factor GreA;protein_id=WP_065256375.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1930041 1930169 . + . ID=gene-LP088_RS09900;Name=LP088_RS09900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09900 NZ_CP087814.1 GeneMarkS-2+ CDS 1930041 1930169 . + 0 ID=cds-WP_264675918.1;Parent=gene-LP088_RS09900;Dbxref=Genbank:WP_264675918.1;Name=WP_264675918.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS09900;product=hypothetical protein;protein_id=WP_264675918.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1930339 1930668 . - . ID=gene-LP088_RS09905;Name=LP088_RS09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09905;old_locus_tag=LP088_09820 NZ_CP087814.1 Protein Homology CDS 1930339 1930668 . - 0 ID=cds-WP_065256373.1;Parent=gene-LP088_RS09905;Dbxref=Genbank:WP_065256373.1;Name=WP_065256373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003245988.1;locus_tag=LP088_RS09905;product=branched-chain amino acid transporter permease;protein_id=WP_065256373.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1930665 1931390 . - . ID=gene-LP088_RS09910;Name=LP088_RS09910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09910;old_locus_tag=LP088_09825 NZ_CP087814.1 Protein Homology CDS 1930665 1931390 . - 0 ID=cds-WP_078273604.1;Parent=gene-LP088_RS09910;Dbxref=Genbank:WP_078273604.1;Name=WP_078273604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016290308.1;locus_tag=LP088_RS09910;product=AzlC family ABC transporter permease;protein_id=WP_078273604.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1931560 1931727 . + . ID=gene-LP088_RS09915;Name=LP088_RS09915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09915;old_locus_tag=LP088_09830 NZ_CP087814.1 Protein Homology CDS 1931560 1931727 . + 0 ID=cds-WP_078273605.1;Parent=gene-LP088_RS09915;Dbxref=Genbank:WP_078273605.1;Name=WP_078273605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657740.1;locus_tag=LP088_RS09915;product=lipoprotein;protein_id=WP_078273605.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1931763 1932554 . + . ID=gene-LP088_RS09920;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=LP088_RS09920;old_locus_tag=LP088_09835 NZ_CP087814.1 Protein Homology CDS 1931763 1932554 . + 0 ID=cds-WP_065256371.1;Parent=gene-LP088_RS09920;Dbxref=Genbank:WP_065256371.1;Name=WP_065256371.1;Ontology_term=GO:0036211;gbkey=CDS;gene=map;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657719.1;locus_tag=LP088_RS09920;product=type I methionyl aminopeptidase;protein_id=WP_065256371.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1932776 1933552 . + . ID=gene-LP088_RS09925;Name=LP088_RS09925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09925;old_locus_tag=LP088_09840 NZ_CP087814.1 Protein Homology CDS 1932776 1933552 . + 0 ID=cds-WP_078273606.1;Parent=gene-LP088_RS09925;Dbxref=Genbank:WP_078273606.1;Name=WP_078273606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199794.1;locus_tag=LP088_RS09925;product=TatD family hydrolase;protein_id=WP_078273606.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1933559 1934533 . - . ID=gene-LP088_RS09930;Name=LP088_RS09930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09930;old_locus_tag=LP088_09845 NZ_CP087814.1 Protein Homology CDS 1933559 1934533 . - 0 ID=cds-WP_264690320.1;Parent=gene-LP088_RS09930;Dbxref=Genbank:WP_264690320.1;Name=WP_264690320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009501387.1;locus_tag=LP088_RS09930;product=dicarboxylate transporter/tellurite-resistance protein TehA;protein_id=WP_264690320.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1934666 1934851 . - . ID=gene-LP088_RS09935;Name=LP088_RS09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09935 NZ_CP087814.1 Protein Homology CDS 1934666 1934851 . - 0 ID=cds-WP_264683038.1;Parent=gene-LP088_RS09935;Dbxref=Genbank:WP_264683038.1;Name=WP_264683038.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013053.2;locus_tag=LP088_RS09935;product=cysteine hydrolase;protein_id=WP_264683038.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1934875 1935504 . - . ID=gene-LP088_RS09940;Name=LP088_RS09940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09940 NZ_CP087814.1 Protein Homology CDS 1934875 1935504 . - 0 ID=cds-WP_264675920.1;Parent=gene-LP088_RS09940;Dbxref=Genbank:WP_264675920.1;Name=WP_264675920.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013053.2;locus_tag=LP088_RS09940;product=isochorismatase family protein;protein_id=WP_264675920.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1935750 1936508 . + . ID=gene-LP088_RS09945;Name=LP088_RS09945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09945;old_locus_tag=LP088_09855 NZ_CP087814.1 Protein Homology CDS 1935750 1936508 . + 0 ID=cds-WP_208624041.1;Parent=gene-LP088_RS09945;Dbxref=Genbank:WP_208624041.1;Name=WP_208624041.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024260.2;locus_tag=LP088_RS09945;product=AraC family transcriptional regulator;protein_id=WP_208624041.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1936753 1937892 . + . ID=gene-LP088_RS09950;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=LP088_RS09950;old_locus_tag=LP088_09860 NZ_CP087814.1 Protein Homology CDS 1936753 1937892 . + 0 ID=cds-WP_264690321.1;Parent=gene-LP088_RS09950;Dbxref=Genbank:WP_264690321.1;Name=WP_264690321.1;Ontology_term=GO:0009220,GO:0004088,GO:0005951;gbkey=CDS;gene=carA;go_component=carbamoyl-phosphate synthase complex|0005951||IEA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004682763.1;locus_tag=LP088_RS09950;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=WP_264690321.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1937955 1938578 . + . ID=gene-LP088_RS09955;Name=LP088_RS09955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09955;old_locus_tag=LP088_09865 NZ_CP087814.1 GeneMarkS-2+ CDS 1937955 1938578 . + 0 ID=cds-WP_078273609.1;Parent=gene-LP088_RS09955;Dbxref=Genbank:WP_078273609.1;Name=WP_078273609.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS09955;product=hypothetical protein;protein_id=WP_078273609.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1938717 1939478 . + . ID=gene-LP088_RS09960;Name=LP088_RS09960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09960;old_locus_tag=LP088_09870 NZ_CP087814.1 GeneMarkS-2+ CDS 1938717 1939478 . + 0 ID=cds-WP_078273610.1;Parent=gene-LP088_RS09960;Dbxref=Genbank:WP_078273610.1;Name=WP_078273610.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS09960;product=hypothetical protein;protein_id=WP_078273610.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1939515 1942745 . + . ID=gene-LP088_RS09965;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=LP088_RS09965;old_locus_tag=LP088_09875 NZ_CP087814.1 Protein Homology CDS 1939515 1942745 . + 0 ID=cds-WP_078273611.1;Parent=gene-LP088_RS09965;Dbxref=Genbank:WP_078273611.1;Name=WP_078273611.1;Ontology_term=GO:0006807,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004996397.1;locus_tag=LP088_RS09965;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_078273611.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1942807 1943301 . + . ID=gene-LP088_RS09970;Name=LP088_RS09970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09970;old_locus_tag=LP088_09880 NZ_CP087814.1 Protein Homology CDS 1942807 1943301 . + 0 ID=cds-WP_078273612.1;Parent=gene-LP088_RS09970;Dbxref=Genbank:WP_078273612.1;Name=WP_078273612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018679135.1;locus_tag=LP088_RS09970;product=putative molybdenum carrier protein;protein_id=WP_078273612.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1943334 1943981 . + . ID=gene-LP088_RS09975;Name=LP088_RS09975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09975;old_locus_tag=LP088_09885 NZ_CP087814.1 Protein Homology CDS 1943334 1943981 . + 0 ID=cds-WP_078273613.1;Parent=gene-LP088_RS09975;Dbxref=Genbank:WP_078273613.1;Name=WP_078273613.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012933.2;locus_tag=LP088_RS09975;product=DNA-3-methyladenine glycosylase;protein_id=WP_078273613.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 1944250 1944811 . - . ID=gene-LP088_RS09980;Name=LP088_RS09980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS09980;old_locus_tag=LP088_09890;pseudo=true NZ_CP087814.1 Protein Homology CDS 1944250 1944811 . - 0 ID=cds-LP088_RS09980;Parent=gene-LP088_RS09980;Note=frameshifted;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011959554.1;locus_tag=LP088_RS09980;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_CP087814.1 RefSeq gene 1945082 1947700 . - . ID=gene-LP088_RS09985;Name=LP088_RS09985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09985;old_locus_tag=LP088_09895 NZ_CP087814.1 Protein Homology CDS 1945082 1947700 . - 0 ID=cds-WP_078273676.1;Parent=gene-LP088_RS09985;Dbxref=Genbank:WP_078273676.1;Name=WP_078273676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003669588.1;locus_tag=LP088_RS09985;product=LysM peptidoglycan-binding domain-containing protein;protein_id=WP_078273676.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1947849 1948424 . - . ID=gene-LP088_RS09990;Name=LP088_RS09990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09990;old_locus_tag=LP088_09900 NZ_CP087814.1 Protein Homology CDS 1947849 1948424 . - 0 ID=cds-WP_112742497.1;Parent=gene-LP088_RS09990;Dbxref=Genbank:WP_112742497.1;Name=WP_112742497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003669584.1;locus_tag=LP088_RS09990;product=nuclear transport factor 2 family protein;protein_id=WP_112742497.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1948541 1949776 . - . ID=gene-LP088_RS09995;Name=LP088_RS09995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS09995;old_locus_tag=LP088_09905 NZ_CP087814.1 Protein Homology CDS 1948541 1949776 . - 0 ID=cds-WP_078273677.1;Parent=gene-LP088_RS09995;Dbxref=Genbank:WP_078273677.1;Name=WP_078273677.1;Ontology_term=GO:0019346,GO:0071268,GO:0003824,GO:0030170;gbkey=CDS;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA,homocysteine biosynthetic process|0071268||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003658238.1;locus_tag=LP088_RS09995;product=O-succinylhomoserine sulfhydrylase;protein_id=WP_078273677.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1949963 1951174 . - . ID=gene-LP088_RS10000;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=LP088_RS10000;old_locus_tag=LP088_09910 NZ_CP087814.1 Protein Homology CDS 1949963 1951174 . - 0 ID=cds-WP_029103255.1;Parent=gene-LP088_RS10000;Dbxref=Genbank:WP_029103255.1;Name=WP_029103255.1;Ontology_term=GO:0019358,GO:0004516;gbkey=CDS;gene=pncB;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=nicotinate nucleotide salvage|0019358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007394081.1;locus_tag=LP088_RS10000;product=nicotinate phosphoribosyltransferase;protein_id=WP_029103255.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1951597 1952256 . - . ID=gene-LP088_RS10005;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=LP088_RS10005;old_locus_tag=LP088_09915 NZ_CP087814.1 Protein Homology CDS 1951597 1952256 . - 0 ID=cds-WP_078273679.1;Parent=gene-LP088_RS10005;Dbxref=Genbank:WP_078273679.1;Name=WP_078273679.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: protein motif:HMM:TIGR00693.1;locus_tag=LP088_RS10005;product=thiamine phosphate synthase;protein_id=WP_078273679.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1952532 1953371 . - . ID=gene-LP088_RS10010;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=LP088_RS10010;old_locus_tag=LP088_09920 NZ_CP087814.1 Protein Homology CDS 1952532 1953371 . - 0 ID=cds-WP_078273680.1;Parent=gene-LP088_RS10010;Dbxref=Genbank:WP_078273680.1;Name=WP_078273680.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: protein motif:HMM:TIGR00097.1;locus_tag=LP088_RS10010;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_078273680.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1953368 1954213 . - . ID=gene-LP088_RS10015;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=LP088_RS10015;old_locus_tag=LP088_09925 NZ_CP087814.1 Protein Homology CDS 1953368 1954213 . - 0 ID=cds-WP_264675921.1;Parent=gene-LP088_RS10015;Dbxref=Genbank:WP_264675921.1;Name=WP_264675921.1;Ontology_term=GO:0009228,GO:0004417;gbkey=CDS;gene=thiM;go_function=hydroxyethylthiazole kinase activity|0004417||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: protein motif:HMM:NF006830.0;locus_tag=LP088_RS10015;product=hydroxyethylthiazole kinase;protein_id=WP_264675921.1;transl_table=11 NZ_CP087814.1 cmsearch riboswitch 1954277 1954367 . - . ID=id-NZ_CP087814.1:1954277..1954367;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP087814.1 RefSeq gene 1954488 1955234 . + . ID=gene-LP088_RS10020;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=LP088_RS10020;old_locus_tag=LP088_09930 NZ_CP087814.1 Protein Homology CDS 1954488 1955234 . + 0 ID=cds-WP_112742498.1;Parent=gene-LP088_RS10020;Dbxref=Genbank:WP_112742498.1;Name=WP_112742498.1;Ontology_term=GO:0009107,GO:0016979;gbkey=CDS;gene=lipB;go_function=lipoate-protein ligase activity|0016979||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513421.1;locus_tag=LP088_RS10020;product=lipoyl(octanoyl) transferase LipB;protein_id=WP_112742498.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1955237 1956391 . + . ID=gene-LP088_RS10025;Name=LP088_RS10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10025;old_locus_tag=LP088_09935 NZ_CP087814.1 GeneMarkS-2+ CDS 1955237 1956391 . + 0 ID=cds-WP_264690322.1;Parent=gene-LP088_RS10025;Dbxref=Genbank:WP_264690322.1;Name=WP_264690322.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS10025;product=hypothetical protein;protein_id=WP_264690322.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1956505 1957038 . + . ID=gene-LP088_RS10030;Name=LP088_RS10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10030;old_locus_tag=LP088_09940 NZ_CP087814.1 Protein Homology CDS 1956505 1957038 . + 0 ID=cds-WP_078273684.1;Parent=gene-LP088_RS10030;Dbxref=Genbank:WP_078273684.1;Name=WP_078273684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003660140.1;locus_tag=LP088_RS10030;product=inorganic diphosphatase;protein_id=WP_078273684.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1957140 1958141 . - . ID=gene-LP088_RS10035;Name=LP088_RS10035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10035;old_locus_tag=LP088_09945 NZ_CP087814.1 Protein Homology CDS 1957140 1958141 . - 0 ID=cds-WP_078273685.1;Parent=gene-LP088_RS10035;Dbxref=Genbank:WP_078273685.1;Name=WP_078273685.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003658326.1;locus_tag=LP088_RS10035;product=pseudouridine synthase;protein_id=WP_078273685.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1958445 1960379 . - . ID=gene-LP088_RS10040;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=LP088_RS10040;old_locus_tag=LP088_09950 NZ_CP087814.1 Protein Homology CDS 1958445 1960379 . - 0 ID=cds-WP_112742500.1;Parent=gene-LP088_RS10040;Dbxref=Genbank:WP_112742500.1;Name=WP_112742500.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004774039.1;locus_tag=LP088_RS10040;product=molecular chaperone HtpG;protein_id=WP_112742500.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1960496 1960960 . - . ID=gene-LP088_RS10045;Name=LP088_RS10045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10045;old_locus_tag=LP088_09955 NZ_CP087814.1 GeneMarkS-2+ CDS 1960496 1960960 . - 0 ID=cds-WP_162860418.1;Parent=gene-LP088_RS10045;Dbxref=Genbank:WP_162860418.1;Name=WP_162860418.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS10045;product=hypothetical protein;protein_id=WP_162860418.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1961177 1961422 . - . ID=gene-LP088_RS10050;Name=LP088_RS10050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10050;old_locus_tag=LP088_09960 NZ_CP087814.1 Protein Homology CDS 1961177 1961422 . - 0 ID=cds-WP_112742502.1;Parent=gene-LP088_RS10050;Dbxref=Genbank:WP_112742502.1;Name=WP_112742502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019673613.1;locus_tag=LP088_RS10050;product=PspC domain-containing protein;protein_id=WP_112742502.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1961591 1962613 . + . ID=gene-LP088_RS10055;Name=nadR;gbkey=Gene;gene=nadR;gene_biotype=protein_coding;locus_tag=LP088_RS10055;old_locus_tag=LP088_09965 NZ_CP087814.1 Protein Homology CDS 1961591 1962613 . + 0 ID=cds-WP_264675923.1;Parent=gene-LP088_RS10055;Dbxref=Genbank:WP_264675923.1;Name=WP_264675923.1;Ontology_term=GO:0009058,GO:0000309,GO:0003677,GO:0050262;gbkey=CDS;gene=nadR;go_function=nicotinamide-nucleotide adenylyltransferase activity|0000309||IEA,DNA binding|0003677||IEA,ribosylnicotinamide kinase activity|0050262||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019518781.1;locus_tag=LP088_RS10055;product=multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR;protein_id=WP_264675923.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1962745 1963902 . - . ID=gene-LP088_RS10060;Name=LP088_RS10060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10060;old_locus_tag=LP088_09970 NZ_CP087814.1 Protein Homology CDS 1962745 1963902 . - 0 ID=cds-WP_228157703.1;Parent=gene-LP088_RS10060;Dbxref=Genbank:WP_228157703.1;Name=WP_228157703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199038.1;locus_tag=LP088_RS10060;product=serine hydrolase;protein_id=WP_228157703.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1964032 1964541 . - . ID=gene-LP088_RS10065;Name=LP088_RS10065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10065;old_locus_tag=LP088_09975 NZ_CP087814.1 GeneMarkS-2+ CDS 1964032 1964541 . - 0 ID=cds-WP_143821657.1;Parent=gene-LP088_RS10065;Dbxref=Genbank:WP_143821657.1;Name=WP_143821657.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS10065;product=hypothetical protein;protein_id=WP_143821657.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1964811 1965794 . + . ID=gene-LP088_RS10070;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=LP088_RS10070;old_locus_tag=LP088_09980 NZ_CP087814.1 Protein Homology CDS 1964811 1965794 . + 0 ID=cds-WP_078273690.1;Parent=gene-LP088_RS10070;Dbxref=Genbank:WP_078273690.1;Name=WP_078273690.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003660790.1;locus_tag=LP088_RS10070;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_078273690.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1965876 1968923 . - . ID=gene-LP088_RS10075;Name=LP088_RS10075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10075;old_locus_tag=LP088_09985 NZ_CP087814.1 Protein Homology CDS 1965876 1968923 . - 0 ID=cds-WP_264675924.1;Parent=gene-LP088_RS10075;Dbxref=Genbank:WP_264675924.1;Name=WP_264675924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004878838.1;locus_tag=LP088_RS10075;product=efflux RND transporter permease subunit;protein_id=WP_264675924.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1968920 1970083 . - . ID=gene-LP088_RS10080;Name=LP088_RS10080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10080;old_locus_tag=LP088_09990 NZ_CP087814.1 Protein Homology CDS 1968920 1970083 . - 0 ID=cds-WP_115369275.1;Parent=gene-LP088_RS10080;Dbxref=Genbank:WP_115369275.1;Name=WP_115369275.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: protein motif:HMM:TIGR01730.1;locus_tag=LP088_RS10080;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_115369275.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1970150 1971529 . - . ID=gene-LP088_RS10085;Name=LP088_RS10085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10085;old_locus_tag=LP088_09995 NZ_CP087814.1 Protein Homology CDS 1970150 1971529 . - 0 ID=cds-WP_264675925.1;Parent=gene-LP088_RS10085;Dbxref=Genbank:WP_264675925.1;Name=WP_264675925.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019509.2;locus_tag=LP088_RS10085;product=phospholipase D-like domain-containing protein;protein_id=WP_264675925.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1971539 1972861 . - . ID=gene-LP088_RS10090;Name=LP088_RS10090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10090;old_locus_tag=LP088_10000 NZ_CP087814.1 Protein Homology CDS 1971539 1972861 . - 0 ID=cds-WP_264675926.1;Parent=gene-LP088_RS10090;Dbxref=Genbank:WP_264675926.1;Name=WP_264675926.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025224.2;locus_tag=LP088_RS10090;product=leucine-rich repeat domain-containing protein;protein_id=WP_264675926.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1972904 1974997 . - . ID=gene-LP088_RS10095;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=LP088_RS10095;old_locus_tag=LP088_10005 NZ_CP087814.1 Protein Homology CDS 1972904 1974997 . - 0 ID=cds-WP_264675927.1;Parent=gene-LP088_RS10095;Dbxref=Genbank:WP_264675927.1;Name=WP_264675927.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009767348.1;locus_tag=LP088_RS10095;product=ATP-dependent DNA helicase RecG;protein_id=WP_264675927.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1975344 1976567 . + . ID=gene-LP088_RS10100;Name=LP088_RS10100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10100;old_locus_tag=LP088_10010 NZ_CP087814.1 Protein Homology CDS 1975344 1976567 . + 0 ID=cds-WP_264675928.1;Parent=gene-LP088_RS10100;Dbxref=Genbank:WP_264675928.1;Name=WP_264675928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003112840.1;locus_tag=LP088_RS10100;product=type II secretion system F family protein;protein_id=WP_264675928.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1976567 1977472 . + . ID=gene-LP088_RS10105;Name=LP088_RS10105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10105;old_locus_tag=LP088_10015 NZ_CP087814.1 Protein Homology CDS 1976567 1977472 . + 0 ID=cds-WP_112742507.1;Parent=gene-LP088_RS10105;Dbxref=Genbank:WP_112742507.1;Name=WP_112742507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019672350.1;locus_tag=LP088_RS10105;product=A24 family peptidase;protein_id=WP_112742507.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1977520 1977596 . + . ID=gene-LP088_RS10110;Name=LP088_RS10110;gbkey=Gene;gene_biotype=tRNA;locus_tag=LP088_RS10110;old_locus_tag=LP088_10020 NZ_CP087814.1 tRNAscan-SE tRNA 1977520 1977596 . + . ID=rna-LP088_RS10110;Parent=gene-LP088_RS10110;anticodon=(pos:1977554..1977556);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS10110;product=tRNA-Val NZ_CP087814.1 tRNAscan-SE exon 1977520 1977596 . + . ID=exon-LP088_RS10110-1;Parent=rna-LP088_RS10110;anticodon=(pos:1977554..1977556);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS10110;product=tRNA-Val NZ_CP087814.1 RefSeq gene 1977716 1980493 . + . ID=gene-LP088_RS10115;Name=glnD;gbkey=Gene;gene=glnD;gene_biotype=protein_coding;locus_tag=LP088_RS10115;old_locus_tag=LP088_10025 NZ_CP087814.1 Protein Homology CDS 1977716 1980493 . + 0 ID=cds-WP_264675929.1;Parent=gene-LP088_RS10115;Dbxref=Genbank:WP_264675929.1;Name=WP_264675929.1;Ontology_term=GO:0018177,GO:0008773;gbkey=CDS;gene=glnD;go_function=[protein-PII] uridylyltransferase activity|0008773||IEA;go_process=protein uridylylation|0018177||IEA;inference=COORDINATES: protein motif:HMM:TIGR01693.1;locus_tag=LP088_RS10115;product=[protein-PII] uridylyltransferase;protein_id=WP_264675929.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1980551 1981399 . + . ID=gene-LP088_RS10120;Name=LP088_RS10120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10120;old_locus_tag=LP088_10030 NZ_CP087814.1 Protein Homology CDS 1980551 1981399 . + 0 ID=cds-WP_078273701.1;Parent=gene-LP088_RS10120;Dbxref=Genbank:WP_078273701.1;Name=WP_078273701.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026253.2;locus_tag=LP088_RS10120;product=WG repeat-containing protein;protein_id=WP_078273701.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1981474 1982505 . - . ID=gene-LP088_RS10125;Name=LP088_RS10125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10125;old_locus_tag=LP088_10035 NZ_CP087814.1 Protein Homology CDS 1981474 1982505 . - 0 ID=cds-WP_078273702.1;Parent=gene-LP088_RS10125;Dbxref=Genbank:WP_078273702.1;Name=WP_078273702.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024779.2;locus_tag=LP088_RS10125;product=DUF4105 domain-containing protein;protein_id=WP_078273702.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1982648 1982953 . + . ID=gene-LP088_RS10130;Name=LP088_RS10130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10130;old_locus_tag=LP088_10040 NZ_CP087814.1 Protein Homology CDS 1982648 1982953 . + 0 ID=cds-WP_078273703.1;Parent=gene-LP088_RS10130;Dbxref=Genbank:WP_078273703.1;Name=WP_078273703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520392.1;locus_tag=LP088_RS10130;product=rhodanese-like domain-containing protein;protein_id=WP_078273703.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1983087 1983163 . + . ID=gene-LP088_RS10135;Name=LP088_RS10135;gbkey=Gene;gene_biotype=tRNA;locus_tag=LP088_RS10135;old_locus_tag=LP088_10045 NZ_CP087814.1 tRNAscan-SE tRNA 1983087 1983163 . + . ID=rna-LP088_RS10135;Parent=gene-LP088_RS10135;anticodon=(pos:1983121..1983123);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS10135;product=tRNA-Pro NZ_CP087814.1 tRNAscan-SE exon 1983087 1983163 . + . ID=exon-LP088_RS10135-1;Parent=rna-LP088_RS10135;anticodon=(pos:1983121..1983123);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS10135;product=tRNA-Pro NZ_CP087814.1 RefSeq gene 1983207 1983283 . + . ID=gene-LP088_RS10140;Name=LP088_RS10140;gbkey=Gene;gene_biotype=tRNA;locus_tag=LP088_RS10140;old_locus_tag=LP088_10050 NZ_CP087814.1 tRNAscan-SE tRNA 1983207 1983283 . + . ID=rna-LP088_RS10140;Parent=gene-LP088_RS10140;anticodon=(pos:1983241..1983243);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS10140;product=tRNA-Arg NZ_CP087814.1 tRNAscan-SE exon 1983207 1983283 . + . ID=exon-LP088_RS10140-1;Parent=rna-LP088_RS10140;anticodon=(pos:1983241..1983243);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS10140;product=tRNA-Arg NZ_CP087814.1 RefSeq gene 1983317 1983392 . + . ID=gene-LP088_RS10145;Name=LP088_RS10145;gbkey=Gene;gene_biotype=tRNA;locus_tag=LP088_RS10145;old_locus_tag=LP088_10055 NZ_CP087814.1 tRNAscan-SE tRNA 1983317 1983392 . + . ID=rna-LP088_RS10145;Parent=gene-LP088_RS10145;anticodon=(pos:1983350..1983352);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS10145;product=tRNA-His NZ_CP087814.1 tRNAscan-SE exon 1983317 1983392 . + . ID=exon-LP088_RS10145-1;Parent=rna-LP088_RS10145;anticodon=(pos:1983350..1983352);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS10145;product=tRNA-His NZ_CP087814.1 RefSeq gene 1983580 1984254 . + . ID=gene-LP088_RS10150;Name=LP088_RS10150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10150;old_locus_tag=LP088_10060 NZ_CP087814.1 Protein Homology CDS 1983580 1984254 . + 0 ID=cds-WP_264676339.1;Parent=gene-LP088_RS10150;Dbxref=Genbank:WP_264676339.1;Name=WP_264676339.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024750.2;locus_tag=LP088_RS10150;product=integrase arm-type DNA-binding domain-containing protein;protein_id=WP_264676339.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1984248 1985114 . + . ID=gene-LP088_RS10155;Name=LP088_RS10155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10155;old_locus_tag=LP088_10065 NZ_CP087814.1 Protein Homology CDS 1984248 1985114 . + 0 ID=cds-WP_264676340.1;Parent=gene-LP088_RS10155;Dbxref=Genbank:WP_264676340.1;Name=WP_264676340.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024547.2;locus_tag=LP088_RS10155;product=YfjI family protein;protein_id=WP_264676340.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1985983 1986147 . - . ID=gene-LP088_RS10160;Name=LP088_RS10160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10160;old_locus_tag=LP088_10070 NZ_CP087814.1 GeneMarkS-2+ CDS 1985983 1986147 . - 0 ID=cds-WP_158079618.1;Parent=gene-LP088_RS10160;Dbxref=Genbank:WP_158079618.1;Name=WP_158079618.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS10160;product=hypothetical protein;protein_id=WP_158079618.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1986117 1986665 . - . ID=gene-LP088_RS10165;Name=LP088_RS10165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10165;old_locus_tag=LP088_10075 NZ_CP087814.1 GeneMarkS-2+ CDS 1986117 1986665 . - 0 ID=cds-WP_078273716.1;Parent=gene-LP088_RS10165;Dbxref=Genbank:WP_078273716.1;Name=WP_078273716.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS10165;product=hypothetical protein;protein_id=WP_078273716.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1986837 1987289 . + . ID=gene-LP088_RS10170;Name=LP088_RS10170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10170;old_locus_tag=LP088_10080 NZ_CP087814.1 Protein Homology CDS 1986837 1987289 . + 0 ID=cds-WP_029103381.1;Parent=gene-LP088_RS10170;Dbxref=Genbank:WP_029103381.1;Name=WP_029103381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013108194.1;locus_tag=LP088_RS10170;product=universal stress protein;protein_id=WP_029103381.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1987508 1988575 . + . ID=gene-LP088_RS10175;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=LP088_RS10175;old_locus_tag=LP088_10085 NZ_CP087814.1 Protein Homology CDS 1987508 1988575 . + 0 ID=cds-WP_078273717.1;Parent=gene-LP088_RS10175;Dbxref=Genbank:WP_078273717.1;Name=WP_078273717.1;Ontology_term=GO:0009220,GO:0004151;gbkey=CDS;gene=pyrC;go_function=dihydroorotase activity|0004151||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514185.1;locus_tag=LP088_RS10175;product=dihydroorotase;protein_id=WP_078273717.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1988572 1989207 . + . ID=gene-LP088_RS10180;Name=rnt;gbkey=Gene;gene=rnt;gene_biotype=protein_coding;locus_tag=LP088_RS10180;old_locus_tag=LP088_10090 NZ_CP087814.1 Protein Homology CDS 1988572 1989207 . + 0 ID=cds-WP_078273718.1;Parent=gene-LP088_RS10180;Dbxref=Genbank:WP_078273718.1;Name=WP_078273718.1;Ontology_term=GO:0006364,GO:0042780,GO:0016896;gbkey=CDS;gene=rnt;go_function=exoribonuclease activity%2C producing 5'-phosphomonoesters|0016896||IEA;go_process=rRNA processing|0006364||IEA,tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520904.1;locus_tag=LP088_RS10180;product=ribonuclease T;protein_id=WP_078273718.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1989268 1989756 . + . ID=gene-LP088_RS10185;Name=LP088_RS10185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10185;old_locus_tag=LP088_10095 NZ_CP087814.1 Protein Homology CDS 1989268 1989756 . + 0 ID=cds-WP_078273719.1;Parent=gene-LP088_RS10185;Dbxref=Genbank:WP_078273719.1;Name=WP_078273719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004906495.1;locus_tag=LP088_RS10185;product=YajQ family cyclic di-GMP-binding protein;protein_id=WP_078273719.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1989941 1990016 . + . ID=gene-LP088_RS10190;Name=LP088_RS10190;gbkey=Gene;gene_biotype=tRNA;locus_tag=LP088_RS10190;old_locus_tag=LP088_10100 NZ_CP087814.1 tRNAscan-SE tRNA 1989941 1990016 . + . ID=rna-LP088_RS10190;Parent=gene-LP088_RS10190;anticodon=(pos:1989975..1989977);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS10190;product=tRNA-Glu NZ_CP087814.1 tRNAscan-SE exon 1989941 1990016 . + . ID=exon-LP088_RS10190-1;Parent=rna-LP088_RS10190;anticodon=(pos:1989975..1989977);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS10190;product=tRNA-Glu NZ_CP087814.1 RefSeq gene 1990174 1990809 . + . ID=gene-LP088_RS10195;Name=LP088_RS10195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10195;old_locus_tag=LP088_10105 NZ_CP087814.1 Protein Homology CDS 1990174 1990809 . + 0 ID=cds-WP_078275365.1;Parent=gene-LP088_RS10195;Dbxref=Genbank:WP_078275365.1;Name=WP_078275365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003656698.1;locus_tag=LP088_RS10195;product=DUF2062 domain-containing protein;protein_id=WP_078275365.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1990836 1991549 . - . ID=gene-LP088_RS10200;Name=LP088_RS10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10200;old_locus_tag=LP088_10110 NZ_CP087814.1 Protein Homology CDS 1990836 1991549 . - 0 ID=cds-WP_078275364.1;Parent=gene-LP088_RS10200;Dbxref=Genbank:WP_078275364.1;Name=WP_078275364.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657592.1;locus_tag=LP088_RS10200;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_078275364.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1991546 1992823 . - . ID=gene-LP088_RS10205;Name=LP088_RS10205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10205;old_locus_tag=LP088_10115 NZ_CP087814.1 Protein Homology CDS 1991546 1992823 . - 0 ID=cds-WP_078275363.1;Parent=gene-LP088_RS10205;Dbxref=Genbank:WP_078275363.1;Name=WP_078275363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003660334.1;locus_tag=LP088_RS10205;product=3-deoxy-D-manno-octulosonic acid transferase;protein_id=WP_078275363.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1992825 1994573 . - . ID=gene-LP088_RS10210;Name=LP088_RS10210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10210;old_locus_tag=LP088_10120 NZ_CP087814.1 Protein Homology CDS 1992825 1994573 . - 0 ID=cds-WP_264675930.1;Parent=gene-LP088_RS10210;Dbxref=Genbank:WP_264675930.1;Name=WP_264675930.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019843.2;locus_tag=LP088_RS10210;product=sel1 repeat family protein;protein_id=WP_264675930.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1994570 1997149 . - . ID=gene-LP088_RS10215;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=LP088_RS10215;old_locus_tag=LP088_10125 NZ_CP087814.1 Protein Homology CDS 1994570 1997149 . - 0 ID=cds-WP_264675931.1;Parent=gene-LP088_RS10215;Dbxref=Genbank:WP_264675931.1;Name=WP_264675931.1;Ontology_term=GO:0006508,GO:0004177,GO:0008237;gbkey=CDS;gene=pepN;go_function=aminopeptidase activity|0004177||IEA,metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011960190.1;locus_tag=LP088_RS10215;product=aminopeptidase N;protein_id=WP_264675931.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1997483 1998001 . + . ID=gene-LP088_RS10220;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=LP088_RS10220;old_locus_tag=LP088_10130 NZ_CP087814.1 Protein Homology CDS 1997483 1998001 . + 0 ID=cds-WP_264675932.1;Parent=gene-LP088_RS10220;Dbxref=Genbank:WP_264675932.1;Name=WP_264675932.1;Ontology_term=GO:0009279;gbkey=CDS;gene=pal;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003671735.1;locus_tag=LP088_RS10220;product=peptidoglycan-associated lipoprotein Pal;protein_id=WP_264675932.1;transl_table=11 NZ_CP087814.1 RefSeq gene 1998724 2000439 . + . ID=gene-LP088_RS10225;Name=LP088_RS10225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10225;old_locus_tag=LP088_10135 NZ_CP087814.1 Protein Homology CDS 1998724 2000439 . + 0 ID=cds-WP_264675933.1;Parent=gene-LP088_RS10225;Dbxref=Genbank:WP_264675933.1;Name=WP_264675933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003670869.1;locus_tag=LP088_RS10225;product=OmpA family protein;protein_id=WP_264675933.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2000525 2001139 . + . ID=gene-LP088_RS10230;Name=LP088_RS10230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10230;old_locus_tag=LP088_10140 NZ_CP087814.1 Protein Homology CDS 2000525 2001139 . + 0 ID=cds-WP_112742513.1;Parent=gene-LP088_RS10230;Dbxref=Genbank:WP_112742513.1;Name=WP_112742513.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442669.1;locus_tag=LP088_RS10230;product=pseudouridine synthase;protein_id=WP_112742513.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2001164 2003014 . - . ID=gene-LP088_RS10235;Name=LP088_RS10235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10235;old_locus_tag=LP088_10145 NZ_CP087814.1 Protein Homology CDS 2001164 2003014 . - 0 ID=cds-WP_264690323.1;Parent=gene-LP088_RS10235;Dbxref=Genbank:WP_264690323.1;Name=WP_264690323.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: protein motif:HMM:NF036516.2;locus_tag=LP088_RS10235;product=PDZ domain-containing protein;protein_id=WP_264690323.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2003287 2003772 . + . ID=gene-LP088_RS10240;Name=LP088_RS10240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10240;old_locus_tag=LP088_10150 NZ_CP087814.1 Protein Homology CDS 2003287 2003772 . + 0 ID=cds-WP_078274018.1;Parent=gene-LP088_RS10240;Dbxref=Genbank:WP_078274018.1;Name=WP_078274018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005402252.1;locus_tag=LP088_RS10240;product=peptidylprolyl isomerase;protein_id=WP_078274018.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2003998 2004462 . + . ID=gene-LP088_RS10245;Name=LP088_RS10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10245;old_locus_tag=LP088_10155 NZ_CP087814.1 Protein Homology CDS 2003998 2004462 . + 0 ID=cds-WP_078274017.1;Parent=gene-LP088_RS10245;Dbxref=Genbank:WP_078274017.1;Name=WP_078274017.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015669.2;locus_tag=LP088_RS10245;product=META domain-containing protein;protein_id=WP_078274017.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2004586 2006694 . + . ID=gene-LP088_RS10250;Name=LP088_RS10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10250;old_locus_tag=LP088_10160 NZ_CP087814.1 Protein Homology CDS 2004586 2006694 . + 0 ID=cds-WP_115369252.1;Parent=gene-LP088_RS10250;Dbxref=Genbank:WP_115369252.1;Name=WP_115369252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009767370.1;locus_tag=LP088_RS10250;product=NADPH-dependent 2%2C4-dienoyl-CoA reductase;protein_id=WP_115369252.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2006743 2007675 . - . ID=gene-LP088_RS10255;Name=LP088_RS10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10255;old_locus_tag=LP088_10165 NZ_CP087814.1 Protein Homology CDS 2006743 2007675 . - 0 ID=cds-WP_078274015.1;Parent=gene-LP088_RS10255;Dbxref=Genbank:WP_078274015.1;Name=WP_078274015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005008551.1;locus_tag=LP088_RS10255;product=DUF4424 family protein;protein_id=WP_078274015.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2007774 2008781 . + . ID=gene-LP088_RS10260;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=LP088_RS10260;old_locus_tag=LP088_10170 NZ_CP087814.1 Protein Homology CDS 2007774 2008781 . + 0 ID=cds-WP_078274032.1;Parent=gene-LP088_RS10260;Dbxref=Genbank:WP_078274032.1;Name=WP_078274032.1;Ontology_term=GO:0033014,GO:0003824,GO:0004655,GO:0046872;gbkey=CDS;gene=hemB;go_function=catalytic activity|0003824||IEA,porphobilinogen synthase activity|0004655||IEA,metal ion binding|0046872||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011182168.1;locus_tag=LP088_RS10260;product=porphobilinogen synthase;protein_id=WP_078274032.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 2008934 2010137 . - . ID=gene-LP088_RS10265;Name=LP088_RS10265;end_range=2010137,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS10265;old_locus_tag=LP088_10175;partial=true;pseudo=true NZ_CP087814.1 Protein Homology CDS 2008934 2010137 . - 0 ID=cds-LP088_RS10265;Parent=gene-LP088_RS10265;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2010137,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512913.1;locus_tag=LP088_RS10265;partial=true;product=ABC transporter permease;pseudo=true;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 2010183 2010704 . - . ID=gene-LP088_RS10270;Name=LP088_RS10270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS10270;old_locus_tag=LP088_10180;partial=true;pseudo=true;start_range=.,2010183 NZ_CP087814.1 Protein Homology CDS 2010183 2010704 . - 0 ID=cds-LP088_RS10270;Parent=gene-LP088_RS10270;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027890.2;locus_tag=LP088_RS10270;partial=true;product=efflux RND transporter periplasmic adaptor subunit;pseudo=true;start_range=.,2010183;transl_table=11 NZ_CP087814.1 RefSeq gene 2010617 2010961 . - . ID=gene-LP088_RS10275;Name=LP088_RS10275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10275;old_locus_tag=LP088_10185 NZ_CP087814.1 Protein Homology CDS 2010617 2010961 . - 0 ID=cds-WP_162860421.1;Parent=gene-LP088_RS10275;Dbxref=Genbank:WP_162860421.1;Name=WP_162860421.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024923.2;locus_tag=LP088_RS10275;product=biotin/lipoyl-binding protein;protein_id=WP_162860421.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2011815 2012825 . - . ID=gene-LP088_RS10280;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=LP088_RS10280;old_locus_tag=LP088_10190 NZ_CP087814.1 Protein Homology CDS 2011815 2012825 . - 0 ID=cds-WP_112742519.1;Parent=gene-LP088_RS10280;Dbxref=Genbank:WP_112742519.1;Name=WP_112742519.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=holA;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003670509.1;locus_tag=LP088_RS10280;product=DNA polymerase III subunit delta;protein_id=WP_112742519.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2012837 2013325 . - . ID=gene-LP088_RS10285;Name=LP088_RS10285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10285;old_locus_tag=LP088_10195 NZ_CP087814.1 GeneMarkS-2+ CDS 2012837 2013325 . - 0 ID=cds-WP_078274012.1;Parent=gene-LP088_RS10285;Dbxref=Genbank:WP_078274012.1;Name=WP_078274012.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS10285;product=hypothetical protein;protein_id=WP_078274012.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2013358 2013651 . - . ID=gene-LP088_RS10290;Name=LP088_RS10290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10290;old_locus_tag=LP088_10200 NZ_CP087814.1 GeneMarkS-2+ CDS 2013358 2013651 . - 0 ID=cds-WP_078274011.1;Parent=gene-LP088_RS10290;Dbxref=Genbank:WP_078274011.1;Name=WP_078274011.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS10290;product=hypothetical protein;protein_id=WP_078274011.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2013737 2016328 . - . ID=gene-LP088_RS10295;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=LP088_RS10295;old_locus_tag=LP088_10205 NZ_CP087814.1 Protein Homology CDS 2013737 2016328 . - 0 ID=cds-WP_112742520.1;Parent=gene-LP088_RS10295;Dbxref=Genbank:WP_112742520.1;Name=WP_112742520.1;Ontology_term=GO:0006429,GO:0004823,GO:0005737;gbkey=CDS;gene=leuS;go_component=cytoplasm|0005737||IEA;go_function=leucine-tRNA ligase activity|0004823||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657512.1;locus_tag=LP088_RS10295;product=leucine--tRNA ligase;protein_id=WP_112742520.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2016420 2016770 . + . ID=gene-LP088_RS10300;Name=LP088_RS10300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10300;old_locus_tag=LP088_10210 NZ_CP087814.1 Protein Homology CDS 2016420 2016770 . + 0 ID=cds-WP_078274009.1;Parent=gene-LP088_RS10300;Dbxref=Genbank:WP_078274009.1;Name=WP_078274009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657511.1;locus_tag=LP088_RS10300;product=Spx/MgsR family RNA polymerase-binding regulatory protein;protein_id=WP_078274009.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2016824 2017090 . + . ID=gene-LP088_RS10305;Name=LP088_RS10305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10305;old_locus_tag=LP088_10215 NZ_CP087814.1 GeneMarkS-2+ CDS 2016824 2017090 . + 0 ID=cds-WP_112742521.1;Parent=gene-LP088_RS10305;Dbxref=Genbank:WP_112742521.1;Name=WP_112742521.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS10305;product=hypothetical protein;protein_id=WP_112742521.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2017373 2018281 . - . ID=gene-LP088_RS10310;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=LP088_RS10310;old_locus_tag=LP088_10220 NZ_CP087814.1 Protein Homology CDS 2017373 2018281 . - 0 ID=cds-WP_112742522.1;Parent=gene-LP088_RS10310;Dbxref=Genbank:WP_112742522.1;Name=WP_112742522.1;Ontology_term=GO:0006592,GO:0003991;gbkey=CDS;gene=argB;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004703301.1;locus_tag=LP088_RS10310;product=acetylglutamate kinase;protein_id=WP_112742522.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2018335 2018799 . - . ID=gene-LP088_RS10315;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=LP088_RS10315;old_locus_tag=LP088_10225 NZ_CP087814.1 Protein Homology CDS 2018335 2018799 . - 0 ID=cds-WP_078274031.1;Parent=gene-LP088_RS10315;Dbxref=Genbank:WP_078274031.1;Name=WP_078274031.1;Ontology_term=GO:0006226,GO:0046081,GO:0000287,GO:0004170;gbkey=CDS;gene=dut;go_function=magnesium ion binding|0000287||IEA,dUTP diphosphatase activity|0004170||IEA;go_process=dUMP biosynthetic process|0006226||IEA,dUTP catabolic process|0046081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512921.1;locus_tag=LP088_RS10315;product=dUTP diphosphatase;protein_id=WP_078274031.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2018980 2019055 . + . ID=gene-LP088_RS10320;Name=LP088_RS10320;gbkey=Gene;gene_biotype=tRNA;locus_tag=LP088_RS10320;old_locus_tag=LP088_10230 NZ_CP087814.1 tRNAscan-SE tRNA 2018980 2019055 . + . ID=rna-LP088_RS10320;Parent=gene-LP088_RS10320;anticodon=(pos:2019013..2019015);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS10320;product=tRNA-Lys NZ_CP087814.1 tRNAscan-SE exon 2018980 2019055 . + . ID=exon-LP088_RS10320-1;Parent=rna-LP088_RS10320;anticodon=(pos:2019013..2019015);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS10320;product=tRNA-Lys NZ_CP087814.1 RefSeq gene 2019091 2019166 . + . ID=gene-LP088_RS10325;Name=LP088_RS10325;gbkey=Gene;gene_biotype=tRNA;locus_tag=LP088_RS10325;old_locus_tag=LP088_10235 NZ_CP087814.1 tRNAscan-SE tRNA 2019091 2019166 . + . ID=rna-LP088_RS10325;Parent=gene-LP088_RS10325;anticodon=(pos:2019124..2019126);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS10325;product=tRNA-Lys NZ_CP087814.1 tRNAscan-SE exon 2019091 2019166 . + . ID=exon-LP088_RS10325-1;Parent=rna-LP088_RS10325;anticodon=(pos:2019124..2019126);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS10325;product=tRNA-Lys NZ_CP087814.1 RefSeq gene 2019168 2019243 . + . ID=gene-LP088_RS10330;Name=LP088_RS10330;gbkey=Gene;gene_biotype=tRNA;locus_tag=LP088_RS10330;old_locus_tag=LP088_10240 NZ_CP087814.1 tRNAscan-SE tRNA 2019168 2019243 . + . ID=rna-LP088_RS10330;Parent=gene-LP088_RS10330;anticodon=(pos:2019201..2019203);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS10330;product=tRNA-Asn NZ_CP087814.1 tRNAscan-SE exon 2019168 2019243 . + . ID=exon-LP088_RS10330-1;Parent=rna-LP088_RS10330;anticodon=(pos:2019201..2019203);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS10330;product=tRNA-Asn NZ_CP087814.1 RefSeq gene 2019530 2020630 . + . ID=gene-LP088_RS10335;Name=LP088_RS10335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10335;old_locus_tag=LP088_10245 NZ_CP087814.1 Protein Homology CDS 2019530 2020630 . + 0 ID=cds-WP_112742836.1;Parent=gene-LP088_RS10335;Dbxref=Genbank:WP_112742836.1;Name=WP_112742836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279915.1;locus_tag=LP088_RS10335;product=PhoH family protein;protein_id=WP_112742836.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2020620 2021171 . + . ID=gene-LP088_RS10340;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=LP088_RS10340;old_locus_tag=LP088_10250 NZ_CP087814.1 Protein Homology CDS 2020620 2021171 . + 0 ID=cds-WP_112742523.1;Parent=gene-LP088_RS10340;Dbxref=Genbank:WP_112742523.1;Name=WP_112742523.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=ribonuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003658339.1;locus_tag=LP088_RS10340;product=rRNA maturation RNase YbeY;protein_id=WP_112742523.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 2021501 2022062 . + . ID=gene-LP088_RS10345;Name=LP088_RS10345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS10345;old_locus_tag=LP088_10255;pseudo=true NZ_CP087814.1 Protein Homology CDS 2021501 2022062 . + 0 ID=cds-LP088_RS10345;Parent=gene-LP088_RS10345;Note=frameshifted;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011959554.1;locus_tag=LP088_RS10345;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_CP087814.1 RefSeq gene 2022222 2023724 . - . ID=gene-LP088_RS10350;Name=LP088_RS10350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10350;old_locus_tag=LP088_10260 NZ_CP087814.1 Protein Homology CDS 2022222 2023724 . - 0 ID=cds-WP_112742524.1;Parent=gene-LP088_RS10350;Dbxref=Genbank:WP_112742524.1;Name=WP_112742524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005297096.1;locus_tag=LP088_RS10350;product=tripartite tricarboxylate transporter permease;protein_id=WP_112742524.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2023728 2024180 . - . ID=gene-LP088_RS10355;Name=LP088_RS10355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10355;old_locus_tag=LP088_10265 NZ_CP087814.1 Protein Homology CDS 2023728 2024180 . - 0 ID=cds-WP_112742525.1;Parent=gene-LP088_RS10355;Dbxref=Genbank:WP_112742525.1;Name=WP_112742525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443968.1;locus_tag=LP088_RS10355;product=tripartite tricarboxylate transporter TctB family protein;protein_id=WP_112742525.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2024244 2025353 . - . ID=gene-LP088_RS10360;Name=LP088_RS10360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10360;old_locus_tag=LP088_10270 NZ_CP087814.1 Protein Homology CDS 2024244 2025353 . - 0 ID=cds-WP_078274003.1;Parent=gene-LP088_RS10360;Dbxref=Genbank:WP_078274003.1;Name=WP_078274003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443967.1;locus_tag=LP088_RS10360;product=tripartite tricarboxylate transporter substrate binding protein;protein_id=WP_078274003.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2025756 2026499 . + . ID=gene-LP088_RS10365;Name=LP088_RS10365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10365;old_locus_tag=LP088_10275 NZ_CP087814.1 Protein Homology CDS 2025756 2026499 . + 0 ID=cds-WP_078274002.1;Parent=gene-LP088_RS10365;Dbxref=Genbank:WP_078274002.1;Name=WP_078274002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520028.1;locus_tag=LP088_RS10365;product=sulfite exporter TauE/SafE family protein;protein_id=WP_078274002.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2026750 2027853 . + . ID=gene-LP088_RS10370;Name=LP088_RS10370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10370;old_locus_tag=LP088_10280 NZ_CP087814.1 Protein Homology CDS 2026750 2027853 . + 0 ID=cds-WP_112742526.1;Parent=gene-LP088_RS10370;Dbxref=Genbank:WP_112742526.1;Name=WP_112742526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017394969.1;locus_tag=LP088_RS10370;product=TAXI family TRAP transporter solute-binding subunit;protein_id=WP_112742526.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2027902 2028369 . + . ID=gene-LP088_RS10375;Name=LP088_RS10375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10375;old_locus_tag=LP088_10285 NZ_CP087814.1 Protein Homology CDS 2027902 2028369 . + 0 ID=cds-WP_264682813.1;Parent=gene-LP088_RS10375;Dbxref=Genbank:WP_264682813.1;Name=WP_264682813.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020479.2;locus_tag=LP088_RS10375;product=DUF1850 domain-containing protein;protein_id=WP_264682813.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2028371 2030371 . + . ID=gene-LP088_RS10380;Name=LP088_RS10380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10380;old_locus_tag=LP088_10290 NZ_CP087814.1 Protein Homology CDS 2028371 2030371 . + 0 ID=cds-WP_112742528.1;Parent=gene-LP088_RS10380;Dbxref=Genbank:WP_112742528.1;Name=WP_112742528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005237022.1;locus_tag=LP088_RS10380;product=TRAP transporter permease;protein_id=WP_112742528.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2030521 2032860 . + . ID=gene-LP088_RS10385;Name=LP088_RS10385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10385;old_locus_tag=LP088_10295 NZ_CP087814.1 Protein Homology CDS 2030521 2032860 . + 0 ID=cds-WP_112742529.1;Parent=gene-LP088_RS10385;Dbxref=Genbank:WP_112742529.1;Name=WP_112742529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013107750.1;locus_tag=LP088_RS10385;product=NADP-dependent malic enzyme;protein_id=WP_112742529.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2032952 2034094 . + . ID=gene-LP088_RS10390;Name=LP088_RS10390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10390;old_locus_tag=LP088_10300 NZ_CP087814.1 Protein Homology CDS 2032952 2034094 . + 0 ID=cds-WP_112742837.1;Parent=gene-LP088_RS10390;Dbxref=Genbank:WP_112742837.1;Name=WP_112742837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003673638.1;locus_tag=LP088_RS10390;product=tRNA nucleotidyltransferase;protein_id=WP_112742837.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2034091 2034861 . + . ID=gene-LP088_RS10395;Name=LP088_RS10395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10395;old_locus_tag=LP088_10305 NZ_CP087814.1 Protein Homology CDS 2034091 2034861 . + 0 ID=cds-WP_112742530.1;Parent=gene-LP088_RS10395;Dbxref=Genbank:WP_112742530.1;Name=WP_112742530.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003659088.1;locus_tag=LP088_RS10395;product=pteridine reductase;protein_id=WP_112742530.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2034944 2035921 . - . ID=gene-LP088_RS10400;Name=LP088_RS10400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10400;old_locus_tag=LP088_10310 NZ_CP087814.1 Protein Homology CDS 2034944 2035921 . - 0 ID=cds-WP_112742531.1;Parent=gene-LP088_RS10400;Dbxref=Genbank:WP_112742531.1;Name=WP_112742531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657461.1;locus_tag=LP088_RS10400;product=porin;protein_id=WP_112742531.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2036513 2037181 . + . ID=gene-LP088_RS10405;Name=LP088_RS10405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10405;old_locus_tag=LP088_10315 NZ_CP087814.1 Protein Homology CDS 2036513 2037181 . + 0 ID=cds-WP_078273996.1;Parent=gene-LP088_RS10405;Dbxref=Genbank:WP_078273996.1;Name=WP_078273996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007395297.1;locus_tag=LP088_RS10405;product=tRNA-(ms[2]io[6]A)-hydroxylase;protein_id=WP_078273996.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2037378 2038319 . + . ID=gene-LP088_RS10410;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=LP088_RS10410;old_locus_tag=LP088_10320 NZ_CP087814.1 Protein Homology CDS 2037378 2038319 . + 0 ID=cds-WP_112742532.1;Parent=gene-LP088_RS10410;Dbxref=Genbank:WP_112742532.1;Name=WP_112742532.1;Ontology_term=GO:0004791;gbkey=CDS;gene=trxB;go_function=thioredoxin-disulfide reductase activity|0004791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009390526.1;locus_tag=LP088_RS10410;product=thioredoxin-disulfide reductase;protein_id=WP_112742532.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2038560 2039921 . - . ID=gene-LP088_RS10415;Name=gorA;gbkey=Gene;gene=gorA;gene_biotype=protein_coding;locus_tag=LP088_RS10415;old_locus_tag=LP088_10325 NZ_CP087814.1 Protein Homology CDS 2038560 2039921 . - 0 ID=cds-WP_264675935.1;Parent=gene-LP088_RS10415;Dbxref=Genbank:WP_264675935.1;Name=WP_264675935.1;Ontology_term=GO:0006749,GO:0045454,GO:0004362,GO:0050660,GO:0050661;gbkey=CDS;gene=gorA;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=glutathione metabolic process|0006749||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005230226.1;locus_tag=LP088_RS10415;product=glutathione-disulfide reductase;protein_id=WP_264675935.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2040095 2040364 . - . ID=gene-LP088_RS10420;Name=LP088_RS10420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10420;old_locus_tag=LP088_10330 NZ_CP087814.1 GeneMarkS-2+ CDS 2040095 2040364 . - 0 ID=cds-WP_264675936.1;Parent=gene-LP088_RS10420;Dbxref=Genbank:WP_264675936.1;Name=WP_264675936.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS10420;product=hypothetical protein;protein_id=WP_264675936.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2040582 2042681 . - . ID=gene-LP088_RS10425;Name=LP088_RS10425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10425;old_locus_tag=LP088_10335 NZ_CP087814.1 Protein Homology CDS 2040582 2042681 . - 0 ID=cds-WP_264675937.1;Parent=gene-LP088_RS10425;Dbxref=Genbank:WP_264675937.1;Name=WP_264675937.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023418.2;locus_tag=LP088_RS10425;product=transglutaminaseTgpA domain-containing protein;protein_id=WP_264675937.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2043140 2044180 . - . ID=gene-LP088_RS10430;Name=LP088_RS10430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10430;old_locus_tag=LP088_10340 NZ_CP087814.1 Protein Homology CDS 2043140 2044180 . - 0 ID=cds-WP_264675938.1;Parent=gene-LP088_RS10430;Dbxref=Genbank:WP_264675938.1;Name=WP_264675938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514264.1;locus_tag=LP088_RS10430;product=DUF58 domain-containing protein;protein_id=WP_264675938.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2044230 2045165 . - . ID=gene-LP088_RS10435;Name=LP088_RS10435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10435;old_locus_tag=LP088_10345 NZ_CP087814.1 Protein Homology CDS 2044230 2045165 . - 0 ID=cds-WP_112742534.1;Parent=gene-LP088_RS10435;Dbxref=Genbank:WP_112742534.1;Name=WP_112742534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444118.1;locus_tag=LP088_RS10435;product=AAA family ATPase;protein_id=WP_112742534.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2045128 2045403 . - . ID=gene-LP088_RS10440;Name=LP088_RS10440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10440;old_locus_tag=LP088_10350 NZ_CP087814.1 GeneMarkS-2+ CDS 2045128 2045403 . - 0 ID=cds-WP_143821677.1;Parent=gene-LP088_RS10440;Dbxref=Genbank:WP_143821677.1;Name=WP_143821677.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS10440;product=hypothetical protein;protein_id=WP_143821677.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2045590 2047683 . - . ID=gene-LP088_RS10445;Name=LP088_RS10445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10445;old_locus_tag=LP088_10355 NZ_CP087814.1 Protein Homology CDS 2045590 2047683 . - 0 ID=cds-WP_078273990.1;Parent=gene-LP088_RS10445;Dbxref=Genbank:WP_078273990.1;Name=WP_078273990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201327.1;locus_tag=LP088_RS10445;product=EAL domain-containing protein;protein_id=WP_078273990.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2047864 2049558 . - . ID=gene-LP088_RS10450;Name=LP088_RS10450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10450;old_locus_tag=LP088_10360 NZ_CP087814.1 GeneMarkS-2+ CDS 2047864 2049558 . - 0 ID=cds-WP_078273989.1;Parent=gene-LP088_RS10450;Dbxref=Genbank:WP_078273989.1;Name=WP_078273989.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS10450;product=hypothetical protein;protein_id=WP_078273989.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2049866 2050069 . - . ID=gene-LP088_RS10455;Name=LP088_RS10455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10455;old_locus_tag=LP088_10365 NZ_CP087814.1 Protein Homology CDS 2049866 2050069 . - 0 ID=cds-WP_115369237.1;Parent=gene-LP088_RS10455;Dbxref=Genbank:WP_115369237.1;Name=WP_115369237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003656331.1;locus_tag=LP088_RS10455;product=hypothetical protein;protein_id=WP_115369237.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2050181 2051185 . - . ID=gene-LP088_RS10460;Name=LP088_RS10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10460;old_locus_tag=LP088_10370 NZ_CP087814.1 GeneMarkS-2+ CDS 2050181 2051185 . - 0 ID=cds-WP_078273987.1;Parent=gene-LP088_RS10460;Dbxref=Genbank:WP_078273987.1;Name=WP_078273987.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS10460;product=hypothetical protein;protein_id=WP_078273987.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2051431 2052270 . - . ID=gene-LP088_RS10465;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=LP088_RS10465;old_locus_tag=LP088_10375 NZ_CP087814.1 Protein Homology CDS 2051431 2052270 . - 0 ID=cds-WP_078273986.1;Parent=gene-LP088_RS10465;Dbxref=Genbank:WP_078273986.1;Name=WP_078273986.1;Ontology_term=GO:0009252,GO:0008881;gbkey=CDS;gene=murI;go_function=glutamate racemase activity|0008881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003656329.1;locus_tag=LP088_RS10465;product=glutamate racemase;protein_id=WP_078273986.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2052285 2052887 . - . ID=gene-LP088_RS10470;Name=LP088_RS10470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10470;old_locus_tag=LP088_10380 NZ_CP087814.1 Protein Homology CDS 2052285 2052887 . - 0 ID=cds-WP_228157704.1;Parent=gene-LP088_RS10470;Dbxref=Genbank:WP_228157704.1;Name=WP_228157704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003667019.1;locus_tag=LP088_RS10470;product=DUF1285 domain-containing protein;protein_id=WP_228157704.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2053219 2054889 . + . ID=gene-LP088_RS10475;Name=LP088_RS10475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10475;old_locus_tag=LP088_10385 NZ_CP087814.1 Protein Homology CDS 2053219 2054889 . + 0 ID=cds-WP_078273984.1;Parent=gene-LP088_RS10475;Dbxref=Genbank:WP_078273984.1;Name=WP_078273984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019672375.1;locus_tag=LP088_RS10475;product=electron transfer flavoprotein-ubiquinone oxidoreductase;protein_id=WP_078273984.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2055157 2055699 . + . ID=gene-LP088_RS10480;Name=LP088_RS10480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10480;old_locus_tag=LP088_10390 NZ_CP087814.1 Protein Homology CDS 2055157 2055699 . + 0 ID=cds-WP_078273983.1;Parent=gene-LP088_RS10480;Dbxref=Genbank:WP_078273983.1;Name=WP_078273983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199315.1;locus_tag=LP088_RS10480;product=glutathione peroxidase;protein_id=WP_078273983.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2055782 2056093 . - . ID=gene-LP088_RS10485;Name=LP088_RS10485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10485;old_locus_tag=LP088_10395 NZ_CP087814.1 Protein Homology CDS 2055782 2056093 . - 0 ID=cds-WP_078274028.1;Parent=gene-LP088_RS10485;Dbxref=Genbank:WP_078274028.1;Name=WP_078274028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201513.1;locus_tag=LP088_RS10485;product=hypothetical protein;protein_id=WP_078274028.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2056301 2057971 . + . ID=gene-LP088_RS10490;Name=LP088_RS10490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10490;old_locus_tag=LP088_10400 NZ_CP087814.1 Protein Homology CDS 2056301 2057971 . + 0 ID=cds-WP_264675939.1;Parent=gene-LP088_RS10490;Dbxref=Genbank:WP_264675939.1;Name=WP_264675939.1;Ontology_term=GO:0009435,GO:0003952,GO:0005524;gbkey=CDS;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,ATP binding|0005524||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007395543.1;locus_tag=LP088_RS10490;product=NAD+ synthase;protein_id=WP_264675939.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2058019 2058375 . + . ID=gene-LP088_RS10495;Name=LP088_RS10495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10495;old_locus_tag=LP088_10405 NZ_CP087814.1 GeneMarkS-2+ CDS 2058019 2058375 . + 0 ID=cds-WP_264690324.1;Parent=gene-LP088_RS10495;Dbxref=Genbank:WP_264690324.1;Name=WP_264690324.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS10495;product=hypothetical protein;protein_id=WP_264690324.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2058372 2059649 . - . ID=gene-LP088_RS10500;Name=LP088_RS10500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10500;old_locus_tag=LP088_10410 NZ_CP087814.1 Protein Homology CDS 2058372 2059649 . - 0 ID=cds-WP_078273981.1;Parent=gene-LP088_RS10500;Dbxref=Genbank:WP_078273981.1;Name=WP_078273981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005181548.1;locus_tag=LP088_RS10500;product=ammonium transporter;protein_id=WP_078273981.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2059692 2060030 . - . ID=gene-LP088_RS10505;Name=LP088_RS10505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10505;old_locus_tag=LP088_10415 NZ_CP087814.1 Protein Homology CDS 2059692 2060030 . - 0 ID=cds-WP_078273980.1;Parent=gene-LP088_RS10505;Dbxref=Genbank:WP_078273980.1;Name=WP_078273980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013574351.1;locus_tag=LP088_RS10505;product=P-II family nitrogen regulator;protein_id=WP_078273980.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2060445 2064674 . - . ID=gene-LP088_RS10510;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=LP088_RS10510;old_locus_tag=LP088_10420 NZ_CP087814.1 Protein Homology CDS 2060445 2064674 . - 0 ID=cds-WP_078273979.1;Parent=gene-LP088_RS10510;Dbxref=Genbank:WP_078273979.1;Name=WP_078273979.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoC;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003670390.1;locus_tag=LP088_RS10510;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_078273979.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2064748 2068854 . - . ID=gene-LP088_RS10515;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=LP088_RS10515;old_locus_tag=LP088_10425 NZ_CP087814.1 Protein Homology CDS 2064748 2068854 . - 0 ID=cds-WP_112742537.1;Parent=gene-LP088_RS10515;Dbxref=Genbank:WP_112742537.1;Name=WP_112742537.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoB;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003658758.1;locus_tag=LP088_RS10515;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_112742537.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2069226 2069600 . - . ID=gene-LP088_RS10520;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=LP088_RS10520;old_locus_tag=LP088_10430 NZ_CP087814.1 Protein Homology CDS 2069226 2069600 . - 0 ID=cds-WP_078273977.1;Parent=gene-LP088_RS10520;Dbxref=Genbank:WP_078273977.1;Name=WP_078273977.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplL;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599214.1;locus_tag=LP088_RS10520;product=50S ribosomal protein L7/L12;protein_id=WP_078273977.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2069673 2070176 . - . ID=gene-LP088_RS10525;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=LP088_RS10525;old_locus_tag=LP088_10435 NZ_CP087814.1 Protein Homology CDS 2069673 2070176 . - 0 ID=cds-WP_078273976.1;Parent=gene-LP088_RS10525;Dbxref=Genbank:WP_078273976.1;Name=WP_078273976.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003656498.1;locus_tag=LP088_RS10525;product=50S ribosomal protein L10;protein_id=WP_078273976.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2070493 2071194 . - . ID=gene-LP088_RS10530;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=LP088_RS10530;old_locus_tag=LP088_10440 NZ_CP087814.1 Protein Homology CDS 2070493 2071194 . - 0 ID=cds-WP_029102312.1;Parent=gene-LP088_RS10530;Dbxref=Genbank:WP_029102312.1;Name=WP_029102312.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplA;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003656500.1;locus_tag=LP088_RS10530;product=50S ribosomal protein L1;protein_id=WP_029102312.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2071194 2071625 . - . ID=gene-LP088_RS10535;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=LP088_RS10535;old_locus_tag=LP088_10445 NZ_CP087814.1 Protein Homology CDS 2071194 2071625 . - 0 ID=cds-WP_062498951.1;Parent=gene-LP088_RS10535;Dbxref=Genbank:WP_062498951.1;Name=WP_062498951.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplK;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007395730.1;locus_tag=LP088_RS10535;product=50S ribosomal protein L11;protein_id=WP_062498951.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2071805 2072338 . - . ID=gene-LP088_RS10540;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=LP088_RS10540;old_locus_tag=LP088_10450 NZ_CP087814.1 Protein Homology CDS 2071805 2072338 . - 0 ID=cds-WP_228157853.1;Parent=gene-LP088_RS10540;Dbxref=Genbank:WP_228157853.1;Name=WP_228157853.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusG;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011182015.1;locus_tag=LP088_RS10540;product=transcription termination/antitermination protein NusG;protein_id=WP_228157853.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2072375 2072884 . - . ID=gene-LP088_RS10545;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=LP088_RS10545;old_locus_tag=LP088_10455 NZ_CP087814.1 Protein Homology CDS 2072375 2072884 . - 0 ID=cds-WP_029102315.1;Parent=gene-LP088_RS10545;Dbxref=Genbank:WP_029102315.1;Name=WP_029102315.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444319.1;locus_tag=LP088_RS10545;product=preprotein translocase subunit SecE;protein_id=WP_029102315.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2072942 2073017 . - . ID=gene-LP088_RS10550;Name=LP088_RS10550;gbkey=Gene;gene_biotype=tRNA;locus_tag=LP088_RS10550;old_locus_tag=LP088_10460 NZ_CP087814.1 tRNAscan-SE tRNA 2072942 2073017 . - . ID=rna-LP088_RS10550;Parent=gene-LP088_RS10550;anticodon=(pos:complement(2072982..2072984));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS10550;product=tRNA-Trp NZ_CP087814.1 tRNAscan-SE exon 2072942 2073017 . - . ID=exon-LP088_RS10550-1;Parent=rna-LP088_RS10550;anticodon=(pos:complement(2072982..2072984));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS10550;product=tRNA-Trp NZ_CP087814.1 RefSeq gene 2073150 2073626 . + . ID=gene-LP088_RS10555;Name=LP088_RS10555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10555;old_locus_tag=LP088_10465 NZ_CP087814.1 Protein Homology CDS 2073150 2073626 . + 0 ID=cds-WP_078273974.1;Parent=gene-LP088_RS10555;Dbxref=Genbank:WP_078273974.1;Name=WP_078273974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003665498.1;locus_tag=LP088_RS10555;product=DUF302 domain-containing protein;protein_id=WP_078273974.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2073684 2074577 . - . ID=gene-LP088_RS10560;Name=LP088_RS10560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10560;old_locus_tag=LP088_10470 NZ_CP087814.1 Protein Homology CDS 2073684 2074577 . - 0 ID=cds-WP_078273973.1;Parent=gene-LP088_RS10560;Dbxref=Genbank:WP_078273973.1;Name=WP_078273973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201997.1;locus_tag=LP088_RS10560;product=DMT family transporter;protein_id=WP_078273973.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2074708 2075100 . - . ID=gene-LP088_RS10565;Name=LP088_RS10565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10565;old_locus_tag=LP088_10475 NZ_CP087814.1 Protein Homology CDS 2074708 2075100 . - 0 ID=cds-WP_078273972.1;Parent=gene-LP088_RS10565;Dbxref=Genbank:WP_078273972.1;Name=WP_078273972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007394492.1;locus_tag=LP088_RS10565;product=hypothetical protein;protein_id=WP_078273972.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2075147 2075464 . - . ID=gene-LP088_RS10570;Name=LP088_RS10570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10570;old_locus_tag=LP088_10480 NZ_CP087814.1 Protein Homology CDS 2075147 2075464 . - 0 ID=cds-WP_078273971.1;Parent=gene-LP088_RS10570;Dbxref=Genbank:WP_078273971.1;Name=WP_078273971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009766954.1;locus_tag=LP088_RS10570;product=BolA family transcriptional regulator;protein_id=WP_078273971.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2075575 2075754 . + . ID=gene-LP088_RS10575;Name=LP088_RS10575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10575;old_locus_tag=LP088_10485 NZ_CP087814.1 Protein Homology CDS 2075575 2075754 . + 0 ID=cds-WP_078273970.1;Parent=gene-LP088_RS10575;Dbxref=Genbank:WP_078273970.1;Name=WP_078273970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009502069.1;locus_tag=LP088_RS10575;product=hypothetical protein;protein_id=WP_078273970.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2075888 2076850 . + . ID=gene-LP088_RS10580;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=LP088_RS10580;old_locus_tag=LP088_10490 NZ_CP087814.1 Protein Homology CDS 2075888 2076850 . + 0 ID=cds-WP_078273969.1;Parent=gene-LP088_RS10580;Dbxref=Genbank:WP_078273969.1;Name=WP_078273969.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003658862.1;locus_tag=LP088_RS10580;product=ferrochelatase;protein_id=WP_078273969.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2076977 2077855 . + . ID=gene-LP088_RS10585;Name=LP088_RS10585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10585;old_locus_tag=LP088_10495 NZ_CP087814.1 Protein Homology CDS 2076977 2077855 . + 0 ID=cds-WP_078273968.1;Parent=gene-LP088_RS10585;Dbxref=Genbank:WP_078273968.1;Name=WP_078273968.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016257.2;locus_tag=LP088_RS10585;product=hypothetical protein;protein_id=WP_078273968.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2077952 2080027 . + . ID=gene-LP088_RS10590;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=LP088_RS10590;old_locus_tag=LP088_10500 NZ_CP087814.1 Protein Homology CDS 2077952 2080027 . + 0 ID=cds-WP_264675941.1;Parent=gene-LP088_RS10590;Dbxref=Genbank:WP_264675941.1;Name=WP_264675941.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512721.1;locus_tag=LP088_RS10590;product=NAD-dependent DNA ligase LigA;protein_id=WP_264675941.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2080540 2081925 . + . ID=gene-LP088_RS10595;Name=LP088_RS10595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10595;old_locus_tag=LP088_10505 NZ_CP087814.1 Protein Homology CDS 2080540 2081925 . + 0 ID=cds-WP_078273966.1;Parent=gene-LP088_RS10595;Dbxref=Genbank:WP_078273966.1;Name=WP_078273966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003659087.1;locus_tag=LP088_RS10595;product=APC family permease;protein_id=WP_078273966.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2082015 2082722 . - . ID=gene-LP088_RS10600;Name=LP088_RS10600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10600;old_locus_tag=LP088_10510 NZ_CP087814.1 Protein Homology CDS 2082015 2082722 . - 0 ID=cds-WP_264675942.1;Parent=gene-LP088_RS10600;Dbxref=Genbank:WP_264675942.1;Name=WP_264675942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011959679.1;locus_tag=LP088_RS10600;product=ParA family protein;protein_id=WP_264675942.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2082921 2083181 . + . ID=gene-LP088_RS10605;Name=LP088_RS10605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10605;old_locus_tag=LP088_10515 NZ_CP087814.1 Protein Homology CDS 2082921 2083181 . + 0 ID=cds-WP_264676341.1;Parent=gene-LP088_RS10605;Dbxref=Genbank:WP_264676341.1;Name=WP_264676341.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019540.2;locus_tag=LP088_RS10605;product=type II toxin-antitoxin system HicA family toxin;protein_id=WP_264676341.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2083162 2083497 . + . ID=gene-LP088_RS10610;Name=LP088_RS10610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10610;old_locus_tag=LP088_10520 NZ_CP087814.1 Protein Homology CDS 2083162 2083497 . + 0 ID=cds-WP_078273964.1;Parent=gene-LP088_RS10610;Dbxref=Genbank:WP_078273964.1;Name=WP_078273964.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017355.2;locus_tag=LP088_RS10610;product=type II toxin-antitoxin system HicB family antitoxin;protein_id=WP_078273964.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 2083681 2084265 . - . ID=gene-LP088_RS10615;Name=LP088_RS10615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS10615;old_locus_tag=LP088_10525;partial=true;pseudo=true;start_range=.,2083681 NZ_CP087814.1 Protein Homology CDS 2083681 2084265 . - 0 ID=cds-LP088_RS10615;Parent=gene-LP088_RS10615;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011961130.1;locus_tag=LP088_RS10615;partial=true;product=TetR/AcrR family transcriptional regulator;pseudo=true;start_range=.,2083681;transl_table=11 NZ_CP087814.1 RefSeq gene 2084527 2085708 . + . ID=gene-LP088_RS10620;Name=LP088_RS10620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10620;old_locus_tag=LP088_10530 NZ_CP087814.1 Protein Homology CDS 2084527 2085708 . + 0 ID=cds-WP_078274027.1;Parent=gene-LP088_RS10620;Dbxref=Genbank:WP_078274027.1;Name=WP_078274027.1;Ontology_term=GO:0006629;gbkey=CDS;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003659082.1;locus_tag=LP088_RS10620;product=fatty acid desaturase;protein_id=WP_078274027.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2086354 2087121 . + . ID=gene-LP088_RS10625;Name=LP088_RS10625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10625;old_locus_tag=LP088_10535 NZ_CP087814.1 Protein Homology CDS 2086354 2087121 . + 0 ID=cds-WP_112742541.1;Parent=gene-LP088_RS10625;Dbxref=Genbank:WP_112742541.1;Name=WP_112742541.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012420.2;locus_tag=LP088_RS10625;product=carbonic anhydrase family protein;protein_id=WP_112742541.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2087255 2088337 . + . ID=gene-LP088_RS10630;Name=LP088_RS10630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10630;old_locus_tag=LP088_10540 NZ_CP087814.1 Protein Homology CDS 2087255 2088337 . + 0 ID=cds-WP_078273961.1;Parent=gene-LP088_RS10630;Dbxref=Genbank:WP_078273961.1;Name=WP_078273961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003673277.1;locus_tag=LP088_RS10630;product=tRNA pseudouridine(13) synthase TruD;protein_id=WP_078273961.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2088334 2089227 . - . ID=gene-LP088_RS10635;Name=LP088_RS10635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10635;old_locus_tag=LP088_10545 NZ_CP087814.1 Protein Homology CDS 2088334 2089227 . - 0 ID=cds-WP_078273960.1;Parent=gene-LP088_RS10635;Dbxref=Genbank:WP_078273960.1;Name=WP_078273960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010327551.1;locus_tag=LP088_RS10635;product=PHP domain-containing protein;protein_id=WP_078273960.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2089313 2090497 . - . ID=gene-LP088_RS10640;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=LP088_RS10640;old_locus_tag=LP088_10550 NZ_CP087814.1 Protein Homology CDS 2089313 2090497 . - 0 ID=cds-WP_029102327.1;Parent=gene-LP088_RS10640;Dbxref=Genbank:WP_029102327.1;Name=WP_029102327.1;Ontology_term=GO:0000910,GO:0003924;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514344.1;locus_tag=LP088_RS10640;product=cell division protein FtsZ;protein_id=WP_029102327.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2090677 2091999 . - . ID=gene-LP088_RS10645;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=LP088_RS10645;old_locus_tag=LP088_10555 NZ_CP087814.1 Protein Homology CDS 2090677 2091999 . - 0 ID=cds-WP_078273959.1;Parent=gene-LP088_RS10645;Dbxref=Genbank:WP_078273959.1;Name=WP_078273959.1;Ontology_term=GO:0043093,GO:0005515,GO:0005524;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: protein motif:HMM:TIGR01174.1;locus_tag=LP088_RS10645;product=cell division protein FtsA;protein_id=WP_078273959.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2092105 2092851 . - . ID=gene-LP088_RS10650;Name=LP088_RS10650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10650;old_locus_tag=LP088_10560 NZ_CP087814.1 Protein Homology CDS 2092105 2092851 . - 0 ID=cds-WP_244893651.1;Parent=gene-LP088_RS10650;Dbxref=Genbank:WP_244893651.1;Name=WP_244893651.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015739.2;locus_tag=LP088_RS10650;product=cell division protein FtsQ/DivIB;protein_id=WP_244893651.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2093240 2094148 . - . ID=gene-LP088_RS10655;Name=LP088_RS10655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10655;old_locus_tag=LP088_10565 NZ_CP087814.1 Protein Homology CDS 2093240 2094148 . - 0 ID=cds-WP_112742542.1;Parent=gene-LP088_RS10655;Dbxref=Genbank:WP_112742542.1;Name=WP_112742542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004978280.1;locus_tag=LP088_RS10655;product=D-alanine--D-alanine ligase;protein_id=WP_112742542.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2094195 2094488 . - . ID=gene-LP088_RS10660;Name=LP088_RS10660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10660;old_locus_tag=LP088_10570 NZ_CP087814.1 GeneMarkS-2+ CDS 2094195 2094488 . - 0 ID=cds-WP_158079641.1;Parent=gene-LP088_RS10660;Dbxref=Genbank:WP_158079641.1;Name=WP_158079641.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS10660;product=hypothetical protein;protein_id=WP_158079641.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2094515 2094619 . - . ID=gene-LP088_RS10665;Name=LP088_RS10665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10665 NZ_CP087814.1 GeneMarkS-2+ CDS 2094515 2094619 . - 0 ID=cds-WP_143821674.1;Parent=gene-LP088_RS10665;Dbxref=Genbank:WP_143821674.1;Name=WP_143821674.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS10665;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_143821674.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2094616 2094876 . - . ID=gene-LP088_RS10670;Name=LP088_RS10670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10670;old_locus_tag=LP088_10575 NZ_CP087814.1 GeneMarkS-2+ CDS 2094616 2094876 . - 0 ID=cds-WP_112742543.1;Parent=gene-LP088_RS10670;Dbxref=Genbank:WP_112742543.1;Name=WP_112742543.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS10670;product=hypothetical protein;protein_id=WP_112742543.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2094886 2096337 . - . ID=gene-LP088_RS10675;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=LP088_RS10675;old_locus_tag=LP088_10580 NZ_CP087814.1 Protein Homology CDS 2094886 2096337 . - 0 ID=cds-WP_078273955.1;Parent=gene-LP088_RS10675;Dbxref=Genbank:WP_078273955.1;Name=WP_078273955.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514348.1;locus_tag=LP088_RS10675;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_078273955.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2096510 2097034 . - . ID=gene-LP088_RS10680;Name=LP088_RS10680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10680;old_locus_tag=LP088_10585 NZ_CP087814.1 Protein Homology CDS 2096510 2097034 . - 0 ID=cds-WP_078273954.1;Parent=gene-LP088_RS10680;Dbxref=Genbank:WP_078273954.1;Name=WP_078273954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003656450.1;locus_tag=LP088_RS10680;product=GNAT family N-acetyltransferase;protein_id=WP_078273954.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2097103 2097288 . - . ID=gene-LP088_RS10685;Name=LP088_RS10685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10685;old_locus_tag=LP088_10590 NZ_CP087814.1 GeneMarkS-2+ CDS 2097103 2097288 . - 0 ID=cds-WP_143821673.1;Parent=gene-LP088_RS10685;Dbxref=Genbank:WP_143821673.1;Name=WP_143821673.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS10685;product=hypothetical protein;protein_id=WP_143821673.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2097281 2097610 . - . ID=gene-LP088_RS10690;Name=LP088_RS10690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10690;old_locus_tag=LP088_10595 NZ_CP087814.1 Protein Homology CDS 2097281 2097610 . - 0 ID=cds-WP_078273952.1;Parent=gene-LP088_RS10690;Dbxref=Genbank:WP_078273952.1;Name=WP_078273952.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR02683.1;locus_tag=LP088_RS10690;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_078273952.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2097607 2098689 . - . ID=gene-LP088_RS10695;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=LP088_RS10695;old_locus_tag=LP088_10600 NZ_CP087814.1 Protein Homology CDS 2097607 2098689 . - 0 ID=cds-WP_112742544.1;Parent=gene-LP088_RS10695;Dbxref=Genbank:WP_112742544.1;Name=WP_112742544.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004463261.1;locus_tag=LP088_RS10695;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_112742544.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2098950 2101907 . + . ID=gene-LP088_RS10700;Name=LP088_RS10700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10700;old_locus_tag=LP088_10605 NZ_CP087814.1 Protein Homology CDS 2098950 2101907 . + 0 ID=cds-WP_228157707.1;Parent=gene-LP088_RS10700;Dbxref=Genbank:WP_228157707.1;Name=WP_228157707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019672915.1;locus_tag=LP088_RS10700;product=DNA translocase FtsK 4TM domain-containing protein;protein_id=WP_228157707.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2102676 2103551 . + . ID=gene-LP088_RS10705;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=LP088_RS10705;old_locus_tag=LP088_10610 NZ_CP087814.1 Protein Homology CDS 2102676 2103551 . + 0 ID=cds-WP_078273950.1;Parent=gene-LP088_RS10705;Dbxref=Genbank:WP_078273950.1;Name=WP_078273950.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009766981.1;locus_tag=LP088_RS10705;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_078273950.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2103709 2104065 . + . ID=gene-LP088_RS10710;Name=LP088_RS10710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10710;old_locus_tag=LP088_10615 NZ_CP087814.1 GeneMarkS-2+ CDS 2103709 2104065 . + 0 ID=cds-WP_162860423.1;Parent=gene-LP088_RS10710;Dbxref=Genbank:WP_162860423.1;Name=WP_162860423.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS10710;product=hypothetical protein;protein_id=WP_162860423.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2104034 2104582 . + . ID=gene-LP088_RS10715;Name=LP088_RS10715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10715;old_locus_tag=LP088_10620 NZ_CP087814.1 GeneMarkS-2+ CDS 2104034 2104582 . + 0 ID=cds-WP_162860424.1;Parent=gene-LP088_RS10715;Dbxref=Genbank:WP_162860424.1;Name=WP_162860424.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS10715;product=hypothetical protein;protein_id=WP_162860424.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2104579 2105421 . + . ID=gene-LP088_RS10720;Name=LP088_RS10720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10720;old_locus_tag=LP088_10625 NZ_CP087814.1 Protein Homology CDS 2104579 2105421 . + 0 ID=cds-WP_078273947.1;Parent=gene-LP088_RS10720;Dbxref=Genbank:WP_078273947.1;Name=WP_078273947.1;Ontology_term=GO:0006231,GO:0004799;gbkey=CDS;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004997638.1;locus_tag=LP088_RS10720;product=thymidylate synthase;protein_id=WP_078273947.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2105438 2105944 . + . ID=gene-LP088_RS10725;Name=LP088_RS10725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10725;old_locus_tag=LP088_10630 NZ_CP087814.1 Protein Homology CDS 2105438 2105944 . + 0 ID=cds-WP_112742549.1;Parent=gene-LP088_RS10725;Dbxref=Genbank:WP_112742549.1;Name=WP_112742549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016654928.1;locus_tag=LP088_RS10725;product=dihydrofolate reductase;protein_id=WP_112742549.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2106150 2106338 . + . ID=gene-LP088_RS10730;Name=LP088_RS10730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10730;old_locus_tag=LP088_10635 NZ_CP087814.1 GeneMarkS-2+ CDS 2106150 2106338 . + 0 ID=cds-WP_078273945.1;Parent=gene-LP088_RS10730;Dbxref=Genbank:WP_078273945.1;Name=WP_078273945.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS10730;product=hypothetical protein;protein_id=WP_078273945.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2106657 2109161 . - . ID=gene-LP088_RS10735;Name=LP088_RS10735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10735;old_locus_tag=LP088_10640 NZ_CP087814.1 Protein Homology CDS 2106657 2109161 . - 0 ID=cds-WP_264675944.1;Parent=gene-LP088_RS10735;Dbxref=Genbank:WP_264675944.1;Name=WP_264675944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003673477.1;locus_tag=LP088_RS10735;product=TonB-dependent receptor;protein_id=WP_264675944.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2109322 2109906 . - . ID=gene-LP088_RS10740;Name=ccmE;gbkey=Gene;gene=ccmE;gene_biotype=protein_coding;locus_tag=LP088_RS10740;old_locus_tag=LP088_10645 NZ_CP087814.1 Protein Homology CDS 2109322 2109906 . - 0 ID=cds-WP_264690325.1;Parent=gene-LP088_RS10740;Dbxref=Genbank:WP_264690325.1;Name=WP_264690325.1;Ontology_term=GO:0017003,GO:0017004,GO:0020037;gbkey=CDS;gene=ccmE;go_function=heme binding|0020037||IEA;go_process=protein-heme linkage|0017003||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003672821.1;locus_tag=LP088_RS10740;product=cytochrome c maturation protein CcmE;protein_id=WP_264690325.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2109910 2110116 . - . ID=gene-LP088_RS10745;Name=ccmD;gbkey=Gene;gene=ccmD;gene_biotype=protein_coding;locus_tag=LP088_RS10745;old_locus_tag=LP088_10650 NZ_CP087814.1 Protein Homology CDS 2109910 2110116 . - 0 ID=cds-WP_112742551.1;Parent=gene-LP088_RS10745;Dbxref=Genbank:WP_112742551.1;Name=WP_112742551.1;Ontology_term=GO:0015886,GO:0017004,GO:0016020;gbkey=CDS;gene=ccmD;go_component=membrane|0016020||IEA;go_process=heme transport|0015886||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003656294.1;locus_tag=LP088_RS10745;product=heme exporter protein CcmD;protein_id=WP_112742551.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2110138 2110938 . - . ID=gene-LP088_RS10750;Name=LP088_RS10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10750;old_locus_tag=LP088_10655 NZ_CP087814.1 Protein Homology CDS 2110138 2110938 . - 0 ID=cds-WP_112742552.1;Parent=gene-LP088_RS10750;Dbxref=Genbank:WP_112742552.1;Name=WP_112742552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011961379.1;locus_tag=LP088_RS10750;product=heme ABC transporter permease;protein_id=WP_112742552.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2111255 2112025 . + . ID=gene-LP088_RS10755;Name=LP088_RS10755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10755;old_locus_tag=LP088_10660 NZ_CP087814.1 Protein Homology CDS 2111255 2112025 . + 0 ID=cds-WP_264675946.1;Parent=gene-LP088_RS10755;Dbxref=Genbank:WP_264675946.1;Name=WP_264675946.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657123.1;locus_tag=LP088_RS10755;product=ATP-binding cassette domain-containing protein;protein_id=WP_264675946.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2112082 2112978 . + . ID=gene-LP088_RS10760;Name=LP088_RS10760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10760;old_locus_tag=LP088_10665 NZ_CP087814.1 Protein Homology CDS 2112082 2112978 . + 0 ID=cds-WP_112742554.1;Parent=gene-LP088_RS10760;Dbxref=Genbank:WP_112742554.1;Name=WP_112742554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011961289.1;locus_tag=LP088_RS10760;product=transporter substrate-binding domain-containing protein;protein_id=WP_112742554.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2113012 2113917 . + . ID=gene-LP088_RS10765;Name=LP088_RS10765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10765;old_locus_tag=LP088_10670 NZ_CP087814.1 Protein Homology CDS 2113012 2113917 . + 0 ID=cds-WP_112742556.1;Parent=gene-LP088_RS10765;Dbxref=Genbank:WP_112742556.1;Name=WP_112742556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007395766.1;locus_tag=LP088_RS10765;product=transporter substrate-binding domain-containing protein;protein_id=WP_112742556.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2114002 2114799 . + . ID=gene-LP088_RS10770;Name=LP088_RS10770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10770;old_locus_tag=LP088_10675 NZ_CP087814.1 Protein Homology CDS 2114002 2114799 . + 0 ID=cds-WP_264675947.1;Parent=gene-LP088_RS10770;Dbxref=Genbank:WP_264675947.1;Name=WP_264675947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011961287.1;locus_tag=LP088_RS10770;product=transporter substrate-binding domain-containing protein;protein_id=WP_264675947.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2114991 2115722 . + . ID=gene-LP088_RS10775;Name=LP088_RS10775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10775;old_locus_tag=LP088_10680 NZ_CP087814.1 Protein Homology CDS 2114991 2115722 . + 0 ID=cds-WP_112742841.1;Parent=gene-LP088_RS10775;Dbxref=Genbank:WP_112742841.1;Name=WP_112742841.1;Note=The N-terminal region of this protein%2C as described by TIGR01726%2C is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits%2C which specificities that include histidine%2C arginine%2C glutamine%2C glutamate%2C L-cystine (sic)%2C the opines (in Agrobacterium) octopine and nopaline%2C etc.;Ontology_term=GO:0015837,GO:0005886,GO:0055052;gbkey=CDS;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=amine transport|0015837||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003662674.1;locus_tag=LP088_RS10775;product=ABC transporter permease subunit;protein_id=WP_112742841.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2115719 2116426 . + . ID=gene-LP088_RS10780;Name=LP088_RS10780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10780;old_locus_tag=LP088_10685 NZ_CP087814.1 Protein Homology CDS 2115719 2116426 . + 0 ID=cds-WP_078273938.1;Parent=gene-LP088_RS10780;Dbxref=Genbank:WP_078273938.1;Name=WP_078273938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519571.1;locus_tag=LP088_RS10780;product=ABC transporter permease;protein_id=WP_078273938.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2117042 2117404 . + . ID=gene-LP088_RS10785;Name=LP088_RS10785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10785;old_locus_tag=LP088_10690 NZ_CP087814.1 Protein Homology CDS 2117042 2117404 . + 0 ID=cds-WP_078274022.1;Parent=gene-LP088_RS10785;Dbxref=Genbank:WP_078274022.1;Name=WP_078274022.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013391.2;locus_tag=LP088_RS10785;product=diacylglycerol kinase;protein_id=WP_078274022.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2117460 2117825 . - . ID=gene-LP088_RS10790;Name=LP088_RS10790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10790;old_locus_tag=LP088_10695 NZ_CP087814.1 Protein Homology CDS 2117460 2117825 . - 0 ID=cds-WP_029102349.1;Parent=gene-LP088_RS10790;Dbxref=Genbank:WP_029102349.1;Name=WP_029102349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519618.1;locus_tag=LP088_RS10790;product=DUF423 domain-containing protein;protein_id=WP_029102349.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2117843 2118694 . - . ID=gene-LP088_RS10795;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=protein_coding;locus_tag=LP088_RS10795;old_locus_tag=LP088_10700 NZ_CP087814.1 Protein Homology CDS 2117843 2118694 . - 0 ID=cds-WP_208624110.1;Parent=gene-LP088_RS10795;Dbxref=Genbank:WP_208624110.1;Name=WP_208624110.1;Ontology_term=GO:0006352,GO:0016987;gbkey=CDS;gene=rpoH;go_function=sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010195919.1;locus_tag=LP088_RS10795;product=RNA polymerase sigma factor RpoH;protein_id=WP_208624110.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2119369 2119731 . - . ID=gene-LP088_RS10800;Name=LP088_RS10800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10800;old_locus_tag=LP088_10705 NZ_CP087814.1 Protein Homology CDS 2119369 2119731 . - 0 ID=cds-WP_264675948.1;Parent=gene-LP088_RS10800;Dbxref=Genbank:WP_264675948.1;Name=WP_264675948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003659205.1;locus_tag=LP088_RS10800;product=sulfurtransferase TusA family protein;protein_id=WP_264675948.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2120040 2120681 . + . ID=gene-LP088_RS10805;Name=LP088_RS10805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10805;old_locus_tag=LP088_10710 NZ_CP087814.1 Protein Homology CDS 2120040 2120681 . + 0 ID=cds-WP_115369205.1;Parent=gene-LP088_RS10805;Dbxref=Genbank:WP_115369205.1;Name=WP_115369205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520296.1;locus_tag=LP088_RS10805;product=YidB family protein;protein_id=WP_115369205.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2120826 2121890 . + . ID=gene-LP088_RS10810;Name=LP088_RS10810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10810;old_locus_tag=LP088_10715 NZ_CP087814.1 Protein Homology CDS 2120826 2121890 . + 0 ID=cds-WP_264675949.1;Parent=gene-LP088_RS10810;Dbxref=Genbank:WP_264675949.1;Name=WP_264675949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003659019.1;locus_tag=LP088_RS10810;product=4-phosphoerythronate dehydrogenase;protein_id=WP_264675949.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2121883 2122851 . + . ID=gene-LP088_RS10815;Name=epmA;gbkey=Gene;gene=epmA;gene_biotype=protein_coding;locus_tag=LP088_RS10815;old_locus_tag=LP088_10720 NZ_CP087814.1 Protein Homology CDS 2121883 2122851 . + 0 ID=cds-WP_264675950.1;Parent=gene-LP088_RS10815;Dbxref=Genbank:WP_264675950.1;Name=WP_264675950.1;Ontology_term=GO:0006430,GO:0000166,GO:0004824,GO:0005524;gbkey=CDS;gene=epmA;go_function=nucleotide binding|0000166||IEA,lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003669319.1;locus_tag=LP088_RS10815;product=EF-P lysine aminoacylase EpmA;protein_id=WP_264675950.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2122852 2123610 . - . ID=gene-LP088_RS10820;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=LP088_RS10820;old_locus_tag=LP088_10725 NZ_CP087814.1 Protein Homology CDS 2122852 2123610 . - 0 ID=cds-WP_078273933.1;Parent=gene-LP088_RS10820;Dbxref=Genbank:WP_078273933.1;Name=WP_078273933.1;Ontology_term=GO:0008033,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N(1))-methyltransferase activity|0052906||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013107728.1;locus_tag=LP088_RS10820;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_078273933.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2123617 2124102 . - . ID=gene-LP088_RS10825;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=LP088_RS10825;old_locus_tag=LP088_10730 NZ_CP087814.1 Protein Homology CDS 2123617 2124102 . - 0 ID=cds-WP_078273932.1;Parent=gene-LP088_RS10825;Dbxref=Genbank:WP_078273932.1;Name=WP_078273932.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005011435.1;locus_tag=LP088_RS10825;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_078273932.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2124247 2125029 . - . ID=gene-LP088_RS10830;Name=nfsA;gbkey=Gene;gene=nfsA;gene_biotype=protein_coding;locus_tag=LP088_RS10830;old_locus_tag=LP088_10735 NZ_CP087814.1 Protein Homology CDS 2124247 2125029 . - 0 ID=cds-WP_078273931.1;Parent=gene-LP088_RS10830;Dbxref=Genbank:WP_078273931.1;Name=WP_078273931.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nfsA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657395.1;locus_tag=LP088_RS10830;product=oxygen-insensitive NADPH nitroreductase;protein_id=WP_078273931.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2125374 2125841 . + . ID=gene-LP088_RS10835;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=LP088_RS10835;old_locus_tag=LP088_10740 NZ_CP087814.1 Protein Homology CDS 2125374 2125841 . + 0 ID=cds-WP_029102357.1;Parent=gene-LP088_RS10835;Dbxref=Genbank:WP_029102357.1;Name=WP_029102357.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003663624.1;locus_tag=LP088_RS10835;product=SsrA-binding protein SmpB;protein_id=WP_029102357.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2125887 2126408 . - . ID=gene-LP088_RS10840;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=LP088_RS10840;old_locus_tag=LP088_10745 NZ_CP087814.1 Protein Homology CDS 2125887 2126408 . - 0 ID=cds-WP_036387272.1;Parent=gene-LP088_RS10840;Dbxref=Genbank:WP_036387272.1;Name=WP_036387272.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011182684.1;locus_tag=LP088_RS10840;product=translation initiation factor IF-3;protein_id=WP_036387272.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2126553 2126966 . - . ID=gene-LP088_RS10845;Name=LP088_RS10845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10845;old_locus_tag=LP088_10750 NZ_CP087814.1 GeneMarkS-2+ CDS 2126553 2126966 . - 0 ID=cds-WP_078273930.1;Parent=gene-LP088_RS10845;Dbxref=Genbank:WP_078273930.1;Name=WP_078273930.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS10845;product=hypothetical protein;protein_id=WP_078273930.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2126985 2127644 . - . ID=gene-LP088_RS10850;Name=LP088_RS10850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10850;old_locus_tag=LP088_10755 NZ_CP087814.1 GeneMarkS-2+ CDS 2126985 2127644 . - 0 ID=cds-WP_078273929.1;Parent=gene-LP088_RS10850;Dbxref=Genbank:WP_078273929.1;Name=WP_078273929.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS10850;product=hypothetical protein;protein_id=WP_078273929.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2128081 2128740 . + . ID=gene-LP088_RS10855;Name=LP088_RS10855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10855;old_locus_tag=LP088_10760 NZ_CP087814.1 GeneMarkS-2+ CDS 2128081 2128740 . + 0 ID=cds-WP_078273928.1;Parent=gene-LP088_RS10855;Dbxref=Genbank:WP_078273928.1;Name=WP_078273928.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS10855;product=hypothetical protein;protein_id=WP_078273928.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2128881 2129282 . + . ID=gene-LP088_RS10860;Name=LP088_RS10860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10860;old_locus_tag=LP088_10765 NZ_CP087814.1 GeneMarkS-2+ CDS 2128881 2129282 . + 0 ID=cds-WP_078273927.1;Parent=gene-LP088_RS10860;Dbxref=Genbank:WP_078273927.1;Name=WP_078273927.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS10860;product=hypothetical protein;protein_id=WP_078273927.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2129887 2130108 . - . ID=gene-LP088_RS10865;Name=LP088_RS10865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10865;old_locus_tag=LP088_10770 NZ_CP087814.1 Protein Homology CDS 2129887 2130108 . - 0 ID=cds-WP_062501070.1;Parent=gene-LP088_RS10865;Dbxref=Genbank:WP_062501070.1;Name=WP_062501070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007117392.1;locus_tag=LP088_RS10865;product=DUF2788 domain-containing protein;protein_id=WP_062501070.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2130177 2131370 . - . ID=gene-LP088_RS10870;Name=ubiM;gbkey=Gene;gene=ubiM;gene_biotype=protein_coding;locus_tag=LP088_RS10870;old_locus_tag=LP088_10775 NZ_CP087814.1 Protein Homology CDS 2130177 2131370 . - 0 ID=cds-WP_112742560.1;Parent=gene-LP088_RS10870;Dbxref=Genbank:WP_112742560.1;Name=WP_112742560.1;Ontology_term=GO:0006744,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiM;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657736.1;locus_tag=LP088_RS10870;product=5-demethoxyubiquinol-8 5-hydroxylase UbiM;protein_id=WP_112742560.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2131398 2131835 . - . ID=gene-LP088_RS10875;Name=LP088_RS10875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10875;old_locus_tag=LP088_10780 NZ_CP087814.1 GeneMarkS-2+ CDS 2131398 2131835 . - 0 ID=cds-WP_078273925.1;Parent=gene-LP088_RS10875;Dbxref=Genbank:WP_078273925.1;Name=WP_078273925.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS10875;product=hypothetical protein;protein_id=WP_078273925.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2132119 2133162 . - . ID=gene-LP088_RS10880;Name=LP088_RS10880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10880;old_locus_tag=LP088_10785 NZ_CP087814.1 Protein Homology CDS 2132119 2133162 . - 0 ID=cds-WP_264675951.1;Parent=gene-LP088_RS10880;Dbxref=Genbank:WP_264675951.1;Name=WP_264675951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009501429.1;locus_tag=LP088_RS10880;product=FAD:protein FMN transferase;protein_id=WP_264675951.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2133363 2137148 . + . ID=gene-LP088_RS10885;Name=cas12a;gbkey=Gene;gene=cas12a;gene_biotype=protein_coding;locus_tag=LP088_RS10885;old_locus_tag=LP088_10790 NZ_CP087814.1 Protein Homology CDS 2133363 2137148 . + 0 ID=cds-WP_112742561.1;Parent=gene-LP088_RS10885;Dbxref=Genbank:WP_112742561.1;Name=WP_112742561.1;gbkey=CDS;gene=cas12a;inference=COORDINATES: protein motif:HMM:TIGR04330.1;locus_tag=LP088_RS10885;product=type V CRISPR-associated protein Cas12a/Cpf1;protein_id=WP_112742561.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2137195 2137749 . + . ID=gene-LP088_RS10890;Name=cas4;gbkey=Gene;gene=cas4;gene_biotype=protein_coding;locus_tag=LP088_RS10890;old_locus_tag=LP088_10795 NZ_CP087814.1 Protein Homology CDS 2137195 2137749 . + 0 ID=cds-WP_078273922.1;Parent=gene-LP088_RS10890;Dbxref=Genbank:WP_078273922.1;Name=WP_078273922.1;Ontology_term=GO:0004518;gbkey=CDS;gene=cas4;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: protein motif:HMM:TIGR04328.1;locus_tag=LP088_RS10890;product=type V CRISPR-associated protein Cas4;protein_id=WP_078273922.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2137763 2138791 . + . ID=gene-LP088_RS10895;Name=cas1;gbkey=Gene;gene=cas1;gene_biotype=protein_coding;locus_tag=LP088_RS10895;old_locus_tag=LP088_10800 NZ_CP087814.1 Protein Homology CDS 2137763 2138791 . + 0 ID=cds-WP_078273921.1;Parent=gene-LP088_RS10895;Dbxref=Genbank:WP_078273921.1;Name=WP_078273921.1;Ontology_term=GO:0043571,GO:0004520,GO:0046872;gbkey=CDS;gene=cas1;go_function=endodeoxyribonuclease activity|0004520||IEA,metal ion binding|0046872||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: protein motif:HMM:TIGR04329.1;locus_tag=LP088_RS10895;product=type V CRISPR-associated endonuclease Cas1;protein_id=WP_078273921.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2138788 2139057 . + . ID=gene-LP088_RS10900;Name=cas2;gbkey=Gene;gene=cas2;gene_biotype=protein_coding;locus_tag=LP088_RS10900;old_locus_tag=LP088_10805 NZ_CP087814.1 Protein Homology CDS 2138788 2139057 . + 0 ID=cds-WP_029104087.1;Parent=gene-LP088_RS10900;Dbxref=Genbank:WP_029104087.1;Name=WP_029104087.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas2;go_function=endoribonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: protein motif:HMM:TIGR01573.1;locus_tag=LP088_RS10900;product=CRISPR-associated endonuclease Cas2;protein_id=WP_029104087.1;transl_table=11 NZ_CP087814.1 RefSeq direct_repeat 2139239 2141758 . + . ID=id-NZ_CP087814.1:2139239..2141758;gbkey=repeat_region;inference=COORDINATES: alignment:pilercr:v1.02;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=2139239..2139274;rpt_unit_seq=gtctaacgaccttttaaatttctactgtttgtagat NZ_CP087814.1 RefSeq gene 2141976 2142980 . - . ID=gene-LP088_RS10905;Name=cmoB;gbkey=Gene;gene=cmoB;gene_biotype=protein_coding;locus_tag=LP088_RS10905;old_locus_tag=LP088_10810 NZ_CP087814.1 Protein Homology CDS 2141976 2142980 . - 0 ID=cds-WP_078273920.1;Parent=gene-LP088_RS10905;Dbxref=Genbank:WP_078273920.1;Name=WP_078273920.1;Ontology_term=GO:0002098,GO:0016765;gbkey=CDS;gene=cmoB;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519797.1;locus_tag=LP088_RS10905;product=tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB;protein_id=WP_078273920.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2143100 2143900 . - . ID=gene-LP088_RS10910;Name=cmoA;gbkey=Gene;gene=cmoA;gene_biotype=protein_coding;locus_tag=LP088_RS10910;old_locus_tag=LP088_10815 NZ_CP087814.1 Protein Homology CDS 2143100 2143900 . - 0 ID=cds-WP_078273919.1;Parent=gene-LP088_RS10910;Dbxref=Genbank:WP_078273919.1;Name=WP_078273919.1;Ontology_term=GO:0006400,GO:0008168;gbkey=CDS;gene=cmoA;go_function=methyltransferase activity|0008168||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011281206.1;locus_tag=LP088_RS10910;product=carboxy-S-adenosyl-L-methionine synthase CmoA;protein_id=WP_078273919.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2143977 2144495 . + . ID=gene-LP088_RS10915;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=LP088_RS10915;old_locus_tag=LP088_10820 NZ_CP087814.1 Protein Homology CDS 2143977 2144495 . + 0 ID=cds-WP_078273918.1;Parent=gene-LP088_RS10915;Dbxref=Genbank:WP_078273918.1;Name=WP_078273918.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005220868.1;locus_tag=LP088_RS10915;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_078273918.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2144705 2146822 . - . ID=gene-LP088_RS10920;Name=LP088_RS10920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10920;old_locus_tag=LP088_10825 NZ_CP087814.1 Protein Homology CDS 2144705 2146822 . - 0 ID=cds-WP_264675952.1;Parent=gene-LP088_RS10920;Dbxref=Genbank:WP_264675952.1;Name=WP_264675952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003671057.1;locus_tag=LP088_RS10920;product=PhoX family phosphatase;protein_id=WP_264675952.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2147007 2147957 . - . ID=gene-LP088_RS10925;Name=gshB;gbkey=Gene;gene=gshB;gene_biotype=protein_coding;locus_tag=LP088_RS10925;old_locus_tag=LP088_10830 NZ_CP087814.1 Protein Homology CDS 2147007 2147957 . - 0 ID=cds-WP_112742563.1;Parent=gene-LP088_RS10925;Dbxref=Genbank:WP_112742563.1;Name=WP_112742563.1;Ontology_term=GO:0006750,GO:0004363,GO:0005524,GO:0046872;gbkey=CDS;gene=gshB;go_function=glutathione synthase activity|0004363||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003673553.1;locus_tag=LP088_RS10925;product=glutathione synthase;protein_id=WP_112742563.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2147979 2148434 . - . ID=gene-LP088_RS10930;Name=LP088_RS10930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10930;old_locus_tag=LP088_10835 NZ_CP087814.1 Protein Homology CDS 2147979 2148434 . - 0 ID=cds-WP_112742564.1;Parent=gene-LP088_RS10930;Dbxref=Genbank:WP_112742564.1;Name=WP_112742564.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013970.2;locus_tag=LP088_RS10930;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_112742564.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2148431 2148670 . - . ID=gene-LP088_RS10935;Name=LP088_RS10935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10935;old_locus_tag=LP088_10840 NZ_CP087814.1 GeneMarkS-2+ CDS 2148431 2148670 . - 0 ID=cds-WP_078273914.1;Parent=gene-LP088_RS10935;Dbxref=Genbank:WP_078273914.1;Name=WP_078273914.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS10935;product=hypothetical protein;protein_id=WP_078273914.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2148679 2149317 . - . ID=gene-LP088_RS10940;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=LP088_RS10940;old_locus_tag=LP088_10845 NZ_CP087814.1 Protein Homology CDS 2148679 2149317 . - 0 ID=cds-WP_078273913.1;Parent=gene-LP088_RS10940;Dbxref=Genbank:WP_078273913.1;Name=WP_078273913.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007394148.1;locus_tag=LP088_RS10940;product=orotate phosphoribosyltransferase;protein_id=WP_078273913.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2149442 2151790 . - . ID=gene-LP088_RS10945;Name=LP088_RS10945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10945;old_locus_tag=LP088_10850 NZ_CP087814.1 Protein Homology CDS 2149442 2151790 . - 0 ID=cds-WP_112742565.1;Parent=gene-LP088_RS10945;Dbxref=Genbank:WP_112742565.1;Name=WP_112742565.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012801.2;locus_tag=LP088_RS10945;product=TonB-dependent receptor;protein_id=WP_112742565.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2151966 2152844 . - . ID=gene-LP088_RS10950;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=LP088_RS10950;old_locus_tag=LP088_10855 NZ_CP087814.1 Protein Homology CDS 2151966 2152844 . - 0 ID=cds-WP_112742566.1;Parent=gene-LP088_RS10950;Dbxref=Genbank:WP_112742566.1;Name=WP_112742566.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003650628.1;locus_tag=LP088_RS10950;product=translation elongation factor Ts;protein_id=WP_112742566.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2152983 2153735 . - . ID=gene-LP088_RS10955;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=LP088_RS10955;old_locus_tag=LP088_10860 NZ_CP087814.1 Protein Homology CDS 2152983 2153735 . - 0 ID=cds-WP_112742567.1;Parent=gene-LP088_RS10955;Dbxref=Genbank:WP_112742567.1;Name=WP_112742567.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsB;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007115803.1;locus_tag=LP088_RS10955;product=30S ribosomal protein S2;protein_id=WP_112742567.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2154034 2154489 . - . ID=gene-LP088_RS10960;Name=LP088_RS10960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10960;old_locus_tag=LP088_10865 NZ_CP087814.1 Protein Homology CDS 2154034 2154489 . - 0 ID=cds-WP_029103043.1;Parent=gene-LP088_RS10960;Dbxref=Genbank:WP_029103043.1;Name=WP_029103043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009766899.1;locus_tag=LP088_RS10960;product=chemotaxis protein CheX;protein_id=WP_029103043.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2154625 2154987 . - . ID=gene-LP088_RS10965;Name=LP088_RS10965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10965;old_locus_tag=LP088_10870 NZ_CP087814.1 Protein Homology CDS 2154625 2154987 . - 0 ID=cds-WP_029103044.1;Parent=gene-LP088_RS10965;Dbxref=Genbank:WP_029103044.1;Name=WP_029103044.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512755.1;locus_tag=LP088_RS10965;product=response regulator;protein_id=WP_029103044.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2155218 2157392 . - . ID=gene-LP088_RS10970;Name=LP088_RS10970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10970;old_locus_tag=LP088_10875 NZ_CP087814.1 Protein Homology CDS 2155218 2157392 . - 0 ID=cds-WP_112742568.1;Parent=gene-LP088_RS10970;Dbxref=Genbank:WP_112742568.1;Name=WP_112742568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442729.1;locus_tag=LP088_RS10970;product=ATP-binding protein;protein_id=WP_112742568.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2158233 2159324 . - . ID=gene-LP088_RS10975;Name=LP088_RS10975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10975;old_locus_tag=LP088_10880 NZ_CP087814.1 Protein Homology CDS 2158233 2159324 . - 0 ID=cds-WP_158079639.1;Parent=gene-LP088_RS10975;Dbxref=Genbank:WP_158079639.1;Name=WP_158079639.1;Ontology_term=GO:0042834;gbkey=CDS;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: protein motif:HMM:NF016895.2;locus_tag=LP088_RS10975;product=SPOR domain-containing protein;protein_id=WP_158079639.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2159462 2160781 . - . ID=gene-LP088_RS10980;Name=LP088_RS10980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10980;old_locus_tag=LP088_10885 NZ_CP087814.1 Protein Homology CDS 2159462 2160781 . - 0 ID=cds-WP_078273907.1;Parent=gene-LP088_RS10980;Dbxref=Genbank:WP_078273907.1;Name=WP_078273907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003665142.1;locus_tag=LP088_RS10980;product=bifunctional folylpolyglutamate synthase/dihydrofolate synthase;protein_id=WP_078273907.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2160907 2161794 . - . ID=gene-LP088_RS10985;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=LP088_RS10985;old_locus_tag=LP088_10890 NZ_CP087814.1 Protein Homology CDS 2160907 2161794 . - 0 ID=cds-WP_078273906.1;Parent=gene-LP088_RS10985;Dbxref=Genbank:WP_078273906.1;Name=WP_078273906.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019672894.1;locus_tag=LP088_RS10985;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WP_078273906.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2161865 2162683 . - . ID=gene-LP088_RS10990;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=LP088_RS10990;old_locus_tag=LP088_10895 NZ_CP087814.1 Protein Homology CDS 2161865 2162683 . - 0 ID=cds-WP_078273905.1;Parent=gene-LP088_RS10990;Dbxref=Genbank:WP_078273905.1;Name=WP_078273905.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512836.1;locus_tag=LP088_RS10990;product=tryptophan synthase subunit alpha;protein_id=WP_078273905.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2162805 2163278 . - . ID=gene-LP088_RS10995;Name=LP088_RS10995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS10995;old_locus_tag=LP088_10900 NZ_CP087814.1 Protein Homology CDS 2162805 2163278 . - 0 ID=cds-WP_078273904.1;Parent=gene-LP088_RS10995;Dbxref=Genbank:WP_078273904.1;Name=WP_078273904.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024787.2;locus_tag=LP088_RS10995;product=HNH endonuclease;protein_id=WP_078273904.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2163278 2164480 . - . ID=gene-LP088_RS11000;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=LP088_RS11000;old_locus_tag=LP088_10905 NZ_CP087814.1 Protein Homology CDS 2163278 2164480 . - 0 ID=cds-WP_112742569.1;Parent=gene-LP088_RS11000;Dbxref=Genbank:WP_112742569.1;Name=WP_112742569.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009501528.1;locus_tag=LP088_RS11000;product=tryptophan synthase subunit beta;protein_id=WP_112742569.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2164501 2164878 . - . ID=gene-LP088_RS11005;Name=LP088_RS11005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11005;old_locus_tag=LP088_10910 NZ_CP087814.1 Protein Homology CDS 2164501 2164878 . - 0 ID=cds-WP_264675953.1;Parent=gene-LP088_RS11005;Dbxref=Genbank:WP_264675953.1;Name=WP_264675953.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013970.2;locus_tag=LP088_RS11005;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_264675953.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2164887 2165123 . - . ID=gene-LP088_RS11010;Name=LP088_RS11010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11010;old_locus_tag=LP088_10915 NZ_CP087814.1 GeneMarkS-2+ CDS 2164887 2165123 . - 0 ID=cds-WP_078273901.1;Parent=gene-LP088_RS11010;Dbxref=Genbank:WP_078273901.1;Name=WP_078273901.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS11010;product=hypothetical protein;protein_id=WP_078273901.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2165132 2165884 . - . ID=gene-LP088_RS11015;Name=LP088_RS11015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11015;old_locus_tag=LP088_10920 NZ_CP087814.1 Protein Homology CDS 2165132 2165884 . - 0 ID=cds-WP_264675954.1;Parent=gene-LP088_RS11015;Dbxref=Genbank:WP_264675954.1;Name=WP_264675954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520373.1;locus_tag=LP088_RS11015;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_264675954.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2165895 2166137 . - . ID=gene-LP088_RS11020;Name=LP088_RS11020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11020;old_locus_tag=LP088_10925 NZ_CP087814.1 Protein Homology CDS 2165895 2166137 . - 0 ID=cds-WP_208624044.1;Parent=gene-LP088_RS11020;Dbxref=Genbank:WP_208624044.1;Name=WP_208624044.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013970.2;locus_tag=LP088_RS11020;product=PIN domain-containing protein;protein_id=WP_208624044.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2166311 2166547 . - . ID=gene-LP088_RS11025;Name=LP088_RS11025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11025;old_locus_tag=LP088_10930 NZ_CP087814.1 GeneMarkS-2+ CDS 2166311 2166547 . - 0 ID=cds-WP_112742571.1;Parent=gene-LP088_RS11025;Dbxref=Genbank:WP_112742571.1;Name=WP_112742571.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS11025;product=hypothetical protein;protein_id=WP_112742571.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2166559 2166960 . - . ID=gene-LP088_RS11030;Name=LP088_RS11030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11030;old_locus_tag=LP088_10935 NZ_CP087814.1 GeneMarkS-2+ CDS 2166559 2166960 . - 0 ID=cds-WP_078273898.1;Parent=gene-LP088_RS11030;Dbxref=Genbank:WP_078273898.1;Name=WP_078273898.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS11030;product=hypothetical protein;protein_id=WP_078273898.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2166962 2167618 . - . ID=gene-LP088_RS11035;Name=LP088_RS11035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11035;old_locus_tag=LP088_10940 NZ_CP087814.1 Protein Homology CDS 2166962 2167618 . - 0 ID=cds-WP_078273897.1;Parent=gene-LP088_RS11035;Dbxref=Genbank:WP_078273897.1;Name=WP_078273897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520376.1;locus_tag=LP088_RS11035;product=phosphoribosylanthranilate isomerase;protein_id=WP_078273897.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2167932 2169272 . + . ID=gene-LP088_RS11040;Name=gdhA;gbkey=Gene;gene=gdhA;gene_biotype=protein_coding;locus_tag=LP088_RS11040;old_locus_tag=LP088_10945 NZ_CP087814.1 Protein Homology CDS 2167932 2169272 . + 0 ID=cds-WP_112742572.1;Parent=gene-LP088_RS11040;Dbxref=Genbank:WP_112742572.1;Name=WP_112742572.1;Ontology_term=GO:0006520,GO:0016639;gbkey=CDS;gene=gdhA;go_function=oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007561126.1;locus_tag=LP088_RS11040;product=NADP-specific glutamate dehydrogenase;protein_id=WP_112742572.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2169595 2170623 . + . ID=gene-LP088_RS11045;Name=LP088_RS11045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11045;old_locus_tag=LP088_10950 NZ_CP087814.1 Protein Homology CDS 2169595 2170623 . + 0 ID=cds-WP_078273895.1;Parent=gene-LP088_RS11045;Dbxref=Genbank:WP_078273895.1;Name=WP_078273895.1;Ontology_term=GO:0006207,GO:0006520,GO:0004070,GO:0016597;gbkey=CDS;go_function=aspartate carbamoyltransferase activity|0004070||IEA,amino acid binding|0016597||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512884.1;locus_tag=LP088_RS11045;product=aspartate carbamoyltransferase catalytic subunit;protein_id=WP_078273895.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2170633 2170863 . + . ID=gene-LP088_RS11050;Name=LP088_RS11050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11050;old_locus_tag=LP088_10955 NZ_CP087814.1 GeneMarkS-2+ CDS 2170633 2170863 . + 0 ID=cds-WP_078273894.1;Parent=gene-LP088_RS11050;Dbxref=Genbank:WP_078273894.1;Name=WP_078273894.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS11050;product=hypothetical protein;protein_id=WP_078273894.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2170863 2171228 . + . ID=gene-LP088_RS11055;Name=LP088_RS11055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11055;old_locus_tag=LP088_10960 NZ_CP087814.1 Protein Homology CDS 2170863 2171228 . + 0 ID=cds-WP_162860425.1;Parent=gene-LP088_RS11055;Dbxref=Genbank:WP_162860425.1;Name=WP_162860425.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013970.2;locus_tag=LP088_RS11055;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_162860425.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2171231 2171773 . + . ID=gene-LP088_RS11060;Name=LP088_RS11060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11060;old_locus_tag=LP088_10965 NZ_CP087814.1 Protein Homology CDS 2171231 2171773 . + 0 ID=cds-WP_112742573.1;Parent=gene-LP088_RS11060;Dbxref=Genbank:WP_112742573.1;Name=WP_112742573.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017496.2;locus_tag=LP088_RS11060;product=Uma2 family endonuclease;protein_id=WP_112742573.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2171842 2172075 . + . ID=gene-LP088_RS11065;Name=LP088_RS11065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11065;old_locus_tag=LP088_10970 NZ_CP087814.1 GeneMarkS-2+ CDS 2171842 2172075 . + 0 ID=cds-WP_264675955.1;Parent=gene-LP088_RS11065;Dbxref=Genbank:WP_264675955.1;Name=WP_264675955.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS11065;product=hypothetical protein;protein_id=WP_264675955.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2172085 2172231 . + . ID=gene-LP088_RS11070;Name=LP088_RS11070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11070;old_locus_tag=LP088_10975 NZ_CP087814.1 GeneMarkS-2+ CDS 2172085 2172231 . + 0 ID=cds-WP_264675956.1;Parent=gene-LP088_RS11070;Dbxref=Genbank:WP_264675956.1;Name=WP_264675956.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS11070;product=SEL1-like repeat protein;protein_id=WP_264675956.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2172262 2172738 . + . ID=gene-LP088_RS11075;Name=LP088_RS11075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11075;old_locus_tag=LP088_10980 NZ_CP087814.1 Protein Homology CDS 2172262 2172738 . + 0 ID=cds-WP_162860426.1;Parent=gene-LP088_RS11075;Dbxref=Genbank:WP_162860426.1;Name=WP_162860426.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021501.2;locus_tag=LP088_RS11075;product=sel1 repeat family protein;protein_id=WP_162860426.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2172760 2173902 . + . ID=gene-LP088_RS11080;Name=LP088_RS11080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11080;old_locus_tag=LP088_10985 NZ_CP087814.1 Protein Homology CDS 2172760 2173902 . + 0 ID=cds-WP_112742576.1;Parent=gene-LP088_RS11080;Dbxref=Genbank:WP_112742576.1;Name=WP_112742576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011961072.1;locus_tag=LP088_RS11080;product=dihydroorotase;protein_id=WP_112742576.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 2174294 2174803 . + . ID=gene-LP088_RS11085;Name=LP088_RS11085;end_range=2174803,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS11085;partial=true;pseudo=true;start_range=.,2174294 NZ_CP087814.1 Protein Homology CDS 2174294 2174803 . + 0 ID=cds-LP088_RS11085;Parent=gene-LP088_RS11085;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2174803,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_021438799.1;locus_tag=LP088_RS11085;partial=true;product=Plug domain-containing protein;pseudo=true;start_range=.,2174294;transl_table=11 NZ_CP087814.1 RefSeq gene 2175206 2176408 . + . ID=gene-LP088_RS11090;Name=LP088_RS11090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11090 NZ_CP087814.1 Protein Homology CDS 2175206 2176408 . + 0 ID=cds-WP_264676342.1;Parent=gene-LP088_RS11090;Dbxref=Genbank:WP_264676342.1;Name=WP_264676342.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012801.2;locus_tag=LP088_RS11090;product=TonB-dependent receptor;protein_id=WP_264676342.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2176747 2178282 . + . ID=gene-LP088_RS11095;Name=LP088_RS11095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11095;old_locus_tag=LP088_10995 NZ_CP087814.1 Protein Homology CDS 2176747 2178282 . + 0 ID=cds-WP_112742577.1;Parent=gene-LP088_RS11095;Dbxref=Genbank:WP_112742577.1;Name=WP_112742577.1;Ontology_term=GO:0055085,GO:0008381;gbkey=CDS;go_function=mechanosensitive ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009767385.1;locus_tag=LP088_RS11095;product=mechanosensitive ion channel;protein_id=WP_112742577.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2178410 2178979 . - . ID=gene-LP088_RS11100;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=LP088_RS11100;old_locus_tag=LP088_11000 NZ_CP087814.1 Protein Homology CDS 2178410 2178979 . - 0 ID=cds-WP_029103061.1;Parent=gene-LP088_RS11100;Dbxref=Genbank:WP_029103061.1;Name=WP_029103061.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520793.1;locus_tag=LP088_RS11100;product=elongation factor P;protein_id=WP_029103061.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2179077 2180081 . + . ID=gene-LP088_RS11105;Name=epmB;gbkey=Gene;gene=epmB;gene_biotype=protein_coding;locus_tag=LP088_RS11105;old_locus_tag=LP088_11005 NZ_CP087814.1 Protein Homology CDS 2179077 2180081 . + 0 ID=cds-WP_078273889.1;Parent=gene-LP088_RS11105;Dbxref=Genbank:WP_078273889.1;Name=WP_078273889.1;Ontology_term=GO:0072581;gbkey=CDS;gene=epmB;go_process=protein-N6-(L-lysyl)-L-lysine modification to protein-N6-(beta-lysyl)-L-lysine|0072581||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514269.1;locus_tag=LP088_RS11105;product=EF-P beta-lysylation protein EpmB;protein_id=WP_078273889.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2180161 2180733 . - . ID=gene-LP088_RS11110;Name=LP088_RS11110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11110;old_locus_tag=LP088_11010 NZ_CP087814.1 Protein Homology CDS 2180161 2180733 . - 0 ID=cds-WP_112742578.1;Parent=gene-LP088_RS11110;Dbxref=Genbank:WP_112742578.1;Name=WP_112742578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019518821.1;locus_tag=LP088_RS11110;product=FxsA family protein;protein_id=WP_112742578.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2180874 2181476 . + . ID=gene-LP088_RS11115;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=LP088_RS11115;old_locus_tag=LP088_11015 NZ_CP087814.1 Protein Homology CDS 2180874 2181476 . + 0 ID=cds-WP_078273887.1;Parent=gene-LP088_RS11115;Dbxref=Genbank:WP_078273887.1;Name=WP_078273887.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction endodeoxyribonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003656930.1;locus_tag=LP088_RS11115;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_078273887.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2181621 2182925 . + . ID=gene-LP088_RS11120;Name=LP088_RS11120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11120;old_locus_tag=LP088_11020 NZ_CP087814.1 Protein Homology CDS 2181621 2182925 . + 0 ID=cds-WP_078273886.1;Parent=gene-LP088_RS11120;Dbxref=Genbank:WP_078273886.1;Name=WP_078273886.1;Ontology_term=GO:0015851,GO:0015205,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA;go_process=nucleobase transport|0015851||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009508818.1;locus_tag=LP088_RS11120;product=NCS2 family nucleobase:cation symporter;protein_id=WP_078273886.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2183019 2183522 . - . ID=gene-LP088_RS11125;Name=LP088_RS11125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11125;old_locus_tag=LP088_11025 NZ_CP087814.1 Protein Homology CDS 2183019 2183522 . - 0 ID=cds-WP_078273885.1;Parent=gene-LP088_RS11125;Dbxref=Genbank:WP_078273885.1;Name=WP_078273885.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519048.1;locus_tag=LP088_RS11125;product=redoxin family protein;protein_id=WP_078273885.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2183724 2185118 . - . ID=gene-LP088_RS11130;Name=LP088_RS11130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11130;old_locus_tag=LP088_11030 NZ_CP087814.1 Protein Homology CDS 2183724 2185118 . - 0 ID=cds-WP_112742579.1;Parent=gene-LP088_RS11130;Dbxref=Genbank:WP_112742579.1;Name=WP_112742579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002116692.1;locus_tag=LP088_RS11130;product=FAD-binding oxidoreductase;protein_id=WP_112742579.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2185414 2185578 . - . ID=gene-LP088_RS11135;Name=LP088_RS11135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11135;old_locus_tag=LP088_11035 NZ_CP087814.1 GeneMarkS-2+ CDS 2185414 2185578 . - 0 ID=cds-WP_264683034.1;Parent=gene-LP088_RS11135;Dbxref=Genbank:WP_264683034.1;Name=WP_264683034.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS11135;product=hypothetical protein;protein_id=WP_264683034.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2185589 2187514 . + . ID=gene-LP088_RS11140;Name=LP088_RS11140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11140;old_locus_tag=LP088_11040 NZ_CP087814.1 GeneMarkS-2+ CDS 2185589 2187514 . + 0 ID=cds-WP_264690326.1;Parent=gene-LP088_RS11140;Dbxref=Genbank:WP_264690326.1;Name=WP_264690326.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS11140;product=hypothetical protein;protein_id=WP_264690326.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2187568 2188374 . + . ID=gene-LP088_RS11145;Name=LP088_RS11145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11145;old_locus_tag=LP088_11045 NZ_CP087814.1 GeneMarkS-2+ CDS 2187568 2188374 . + 0 ID=cds-WP_112741850.1-3;Parent=gene-LP088_RS11145;Dbxref=Genbank:WP_112741850.1;Name=WP_112741850.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS11145;product=hypothetical protein;protein_id=WP_112741850.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2188375 2188719 . + . ID=gene-LP088_RS11150;Name=LP088_RS11150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11150;old_locus_tag=LP088_11050 NZ_CP087814.1 GeneMarkS-2+ CDS 2188375 2188719 . + 0 ID=cds-WP_078274937.1-3;Parent=gene-LP088_RS11150;Dbxref=Genbank:WP_078274937.1;Name=WP_078274937.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS11150;product=hypothetical protein;protein_id=WP_078274937.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2188707 2190536 . + . ID=gene-LP088_RS11155;Name=LP088_RS11155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11155;old_locus_tag=LP088_11055 NZ_CP087814.1 GeneMarkS-2+ CDS 2188707 2190536 . + 0 ID=cds-WP_078274936.1-3;Parent=gene-LP088_RS11155;Dbxref=Genbank:WP_078274936.1;Name=WP_078274936.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS11155;product=hypothetical protein;protein_id=WP_078274936.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2190595 2190819 . + . ID=gene-LP088_RS11160;Name=LP088_RS11160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11160;old_locus_tag=LP088_11060 NZ_CP087814.1 GeneMarkS-2+ CDS 2190595 2190819 . + 0 ID=cds-WP_078274935.1-3;Parent=gene-LP088_RS11160;Dbxref=Genbank:WP_078274935.1;Name=WP_078274935.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS11160;product=DUF2190 family protein;protein_id=WP_078274935.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 2190925 2191374 . - . ID=gene-LP088_RS11165;Name=LP088_RS11165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS11165;old_locus_tag=LP088_11065;partial=true;pseudo=true;start_range=.,2190925 NZ_CP087814.1 Protein Homology CDS 2190925 2191374 . - 0 ID=cds-LP088_RS11165;Parent=gene-LP088_RS11165;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005054115.1;locus_tag=LP088_RS11165;partial=true;product=alcohol dehydrogenase catalytic domain-containing protein;pseudo=true;start_range=.,2190925;transl_table=11 NZ_CP087814.1 RefSeq gene 2191495 2191662 . - . ID=gene-LP088_RS11170;Name=LP088_RS11170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11170;old_locus_tag=LP088_11070 NZ_CP087814.1 GeneMarkS-2+ CDS 2191495 2191662 . - 0 ID=cds-WP_158079683.1;Parent=gene-LP088_RS11170;Dbxref=Genbank:WP_158079683.1;Name=WP_158079683.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS11170;product=hypothetical protein;protein_id=WP_158079683.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2192115 2193602 . - . ID=gene-LP088_RS11175;Name=LP088_RS11175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11175;old_locus_tag=LP088_11075 NZ_CP087814.1 Protein Homology CDS 2192115 2193602 . - 0 ID=cds-WP_112742582.1;Parent=gene-LP088_RS11175;Dbxref=Genbank:WP_112742582.1;Name=WP_112742582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003656349.1;locus_tag=LP088_RS11175;product=aminoacyl-histidine dipeptidase;protein_id=WP_112742582.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2193653 2195458 . - . ID=gene-LP088_RS11180;Name=LP088_RS11180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11180;old_locus_tag=LP088_11080 NZ_CP087814.1 Protein Homology CDS 2193653 2195458 . - 0 ID=cds-WP_264675958.1;Parent=gene-LP088_RS11180;Dbxref=Genbank:WP_264675958.1;Name=WP_264675958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011281230.1;locus_tag=LP088_RS11180;product=aminopeptidase P family protein;protein_id=WP_264675958.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2195794 2195991 . - . ID=gene-LP088_RS11185;Name=LP088_RS11185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11185;old_locus_tag=LP088_11085 NZ_CP087814.1 GeneMarkS-2+ CDS 2195794 2195991 . - 0 ID=cds-WP_078274757.1-2;Parent=gene-LP088_RS11185;Dbxref=Genbank:WP_078274757.1;Name=WP_078274757.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS11185;product=hypothetical protein;protein_id=WP_078274757.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2195993 2196670 . - . ID=gene-LP088_RS11190;Name=LP088_RS11190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11190;old_locus_tag=LP088_11090 NZ_CP087814.1 Protein Homology CDS 2195993 2196670 . - 0 ID=cds-WP_264676328.1-2;Parent=gene-LP088_RS11190;Dbxref=Genbank:WP_264676328.1;Name=WP_264676328.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033564.0;locus_tag=LP088_RS11190;product=ISAs1 family transposase;protein_id=WP_264676328.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2196837 2197519 . + . ID=gene-LP088_RS11195;Name=LP088_RS11195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11195;old_locus_tag=LP088_11095 NZ_CP087814.1 Protein Homology CDS 2196837 2197161 . + 0 ID=cds-WP_112742585.1;Parent=gene-LP088_RS11195;Dbxref=Genbank:WP_112742585.1;Name=WP_112742585.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611661.1;locus_tag=LP088_RS11195;product=IS1 family transposase;protein_id=WP_112742585.1;transl_table=11 NZ_CP087814.1 Protein Homology CDS 2197161 2197519 . + 2 ID=cds-WP_112742585.1;Parent=gene-LP088_RS11195;Dbxref=Genbank:WP_112742585.1;Name=WP_112742585.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611661.1;locus_tag=LP088_RS11195;product=IS1 family transposase;protein_id=WP_112742585.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2197675 2198979 . - . ID=gene-LP088_RS11200;Name=LP088_RS11200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11200;old_locus_tag=LP088_11100 NZ_CP087814.1 Protein Homology CDS 2197675 2198979 . - 0 ID=cds-WP_078275054.1;Parent=gene-LP088_RS11200;Dbxref=Genbank:WP_078275054.1;Name=WP_078275054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520347.1;locus_tag=LP088_RS11200;product=TolC family protein;protein_id=WP_078275054.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2199181 2200608 . - . ID=gene-LP088_RS11205;Name=LP088_RS11205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11205;old_locus_tag=LP088_11105 NZ_CP087814.1 Protein Homology CDS 2199181 2200608 . - 0 ID=cds-WP_078275053.1;Parent=gene-LP088_RS11205;Dbxref=Genbank:WP_078275053.1;Name=WP_078275053.1;Ontology_term=GO:0030253;gbkey=CDS;go_process=protein secretion by the type I secretion system|0030253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520346.1;locus_tag=LP088_RS11205;product=HlyD family type I secretion periplasmic adaptor subunit;protein_id=WP_078275053.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2200656 2202809 . - . ID=gene-LP088_RS11210;Name=LP088_RS11210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11210;old_locus_tag=LP088_11110 NZ_CP087814.1 Protein Homology CDS 2200656 2202809 . - 0 ID=cds-WP_264676343.1;Parent=gene-LP088_RS11210;Dbxref=Genbank:WP_264676343.1;Name=WP_264676343.1;Ontology_term=GO:0030253;gbkey=CDS;go_process=protein secretion by the type I secretion system|0030253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_140441271.1;locus_tag=LP088_RS11210;product=type I secretion system permease/ATPase;protein_id=WP_264676343.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2202934 2205717 . - . ID=gene-LP088_RS11215;Name=LP088_RS11215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11215;old_locus_tag=LP088_11115 NZ_CP087814.1 Protein Homology CDS 2202934 2205717 . - 0 ID=cds-WP_078275051.1;Parent=gene-LP088_RS11215;Dbxref=Genbank:WP_078275051.1;Name=WP_078275051.1;Ontology_term=GO:0005509,GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;go_function=calcium ion binding|0005509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520344.1;locus_tag=LP088_RS11215;product=RTX family hemolysin;protein_id=WP_078275051.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2205754 2206260 . - . ID=gene-LP088_RS11220;Name=LP088_RS11220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11220;old_locus_tag=LP088_11120 NZ_CP087814.1 Protein Homology CDS 2205754 2206260 . - 0 ID=cds-WP_078275050.1;Parent=gene-LP088_RS11220;Dbxref=Genbank:WP_078275050.1;Name=WP_078275050.1;Ontology_term=GO:0009404,GO:0016746,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=acyltransferase activity|0016746||IEA;go_process=toxin metabolic process|0009404||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520343.1;locus_tag=LP088_RS11220;product=toxin-activating lysine-acyltransferase;protein_id=WP_078275050.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2206391 2207068 . - . ID=gene-LP088_RS11225;Name=LP088_RS11225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11225;old_locus_tag=LP088_11125 NZ_CP087814.1 Protein Homology CDS 2206391 2207068 . - 0 ID=cds-WP_264676344.1;Parent=gene-LP088_RS11225;Dbxref=Genbank:WP_264676344.1;Name=WP_264676344.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033564.0;locus_tag=LP088_RS11225;product=ISAs1 family transposase;protein_id=WP_264676344.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2207075 2207281 . + . ID=gene-LP088_RS11230;Name=LP088_RS11230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11230;old_locus_tag=LP088_11130 NZ_CP087814.1 GeneMarkS-2+ CDS 2207075 2207281 . + 0 ID=cds-WP_208624045.1;Parent=gene-LP088_RS11230;Dbxref=Genbank:WP_208624045.1;Name=WP_208624045.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS11230;product=hypothetical protein;protein_id=WP_208624045.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2207367 2208353 . - . ID=gene-LP088_RS11235;Name=LP088_RS11235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11235;old_locus_tag=LP088_11135 NZ_CP087814.1 Protein Homology CDS 2207367 2208353 . - 0 ID=cds-WP_078273815.1;Parent=gene-LP088_RS11235;Dbxref=Genbank:WP_078273815.1;Name=WP_078273815.1;Ontology_term=GO:0006108,GO:0016615;gbkey=CDS;go_function=malate dehydrogenase activity|0016615||IEA;go_process=malate metabolic process|0006108||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004996753.1;locus_tag=LP088_RS11235;product=malate dehydrogenase;protein_id=WP_078273815.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2208844 2210871 . - . ID=gene-LP088_RS11240;Name=LP088_RS11240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11240;old_locus_tag=LP088_11140 NZ_CP087814.1 Protein Homology CDS 2208844 2210871 . - 0 ID=cds-WP_228157709.1;Parent=gene-LP088_RS11240;Dbxref=Genbank:WP_228157709.1;Name=WP_228157709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444207.1;locus_tag=LP088_RS11240;product=transglycosylase SLT domain-containing protein;protein_id=WP_228157709.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2211283 2211507 . - . ID=gene-LP088_RS11245;Name=LP088_RS11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11245;old_locus_tag=LP088_11145 NZ_CP087814.1 GeneMarkS-2+ CDS 2211283 2211507 . - 0 ID=cds-WP_078274935.1-4;Parent=gene-LP088_RS11245;Dbxref=Genbank:WP_078274935.1;Name=WP_078274935.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS11245;product=DUF2190 family protein;protein_id=WP_078274935.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2211566 2213008 . - . ID=gene-LP088_RS11250;Name=LP088_RS11250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11250;old_locus_tag=LP088_11150 NZ_CP087814.1 GeneMarkS-2+ CDS 2211566 2213008 . - 0 ID=cds-WP_264675959.1;Parent=gene-LP088_RS11250;Dbxref=Genbank:WP_264675959.1;Name=WP_264675959.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS11250;product=hypothetical protein;protein_id=WP_264675959.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2213023 2213232 . - . ID=gene-LP088_RS11255;Name=LP088_RS11255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11255;old_locus_tag=LP088_11155 NZ_CP087814.1 Protein Homology CDS 2213023 2213232 . - 0 ID=cds-WP_078274960.1-2;Parent=gene-LP088_RS11255;Dbxref=Genbank:WP_078274960.1;Name=WP_078274960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001510316.1;locus_tag=LP088_RS11255;product=hypothetical protein;protein_id=WP_078274960.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2213397 2213696 . + . ID=gene-LP088_RS11260;Name=LP088_RS11260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11260;old_locus_tag=LP088_11160 NZ_CP087814.1 Protein Homology CDS 2213397 2213696 . + 0 ID=cds-WP_078274961.1-2;Parent=gene-LP088_RS11260;Dbxref=Genbank:WP_078274961.1;Name=WP_078274961.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024949.2;locus_tag=LP088_RS11260;product=helix-turn-helix domain-containing protein;protein_id=WP_078274961.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2213891 2214178 . + . ID=gene-LP088_RS11265;Name=LP088_RS11265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11265;old_locus_tag=LP088_11165 NZ_CP087814.1 GeneMarkS-2+ CDS 2213891 2214178 . + 0 ID=cds-WP_078274962.1-2;Parent=gene-LP088_RS11265;Dbxref=Genbank:WP_078274962.1;Name=WP_078274962.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS11265;product=ORF6C domain-containing protein;protein_id=WP_078274962.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2214175 2214594 . + . ID=gene-LP088_RS11270;Name=LP088_RS11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11270;old_locus_tag=LP088_11170 NZ_CP087814.1 Protein Homology CDS 2214175 2214594 . + 0 ID=cds-WP_112741841.1-2;Parent=gene-LP088_RS11270;Dbxref=Genbank:WP_112741841.1;Name=WP_112741841.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012920.2;locus_tag=LP088_RS11270;product=S24 family peptidase;protein_id=WP_112741841.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2214912 2215301 . - . ID=gene-LP088_RS11275;Name=LP088_RS11275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11275;old_locus_tag=LP088_11175 NZ_CP087814.1 GeneMarkS-2+ CDS 2214912 2215301 . - 0 ID=cds-WP_112741840.1;Parent=gene-LP088_RS11275;Dbxref=Genbank:WP_112741840.1;Name=WP_112741840.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS11275;product=hypothetical protein;protein_id=WP_112741840.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2215363 2215503 . - . ID=gene-LP088_RS11280;Name=LP088_RS11280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11280;old_locus_tag=LP088_11180 NZ_CP087814.1 GeneMarkS-2+ CDS 2215363 2215503 . - 0 ID=cds-WP_264675960.1;Parent=gene-LP088_RS11280;Dbxref=Genbank:WP_264675960.1;Name=WP_264675960.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS11280;product=hypothetical protein;protein_id=WP_264675960.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2215605 2215763 . + . ID=gene-LP088_RS11285;Name=LP088_RS11285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11285;old_locus_tag=LP088_11185 NZ_CP087814.1 GeneMarkS-2+ CDS 2215605 2215763 . + 0 ID=cds-WP_162860343.1;Parent=gene-LP088_RS11285;Dbxref=Genbank:WP_162860343.1;Name=WP_162860343.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS11285;product=hypothetical protein;protein_id=WP_162860343.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2215803 2216288 . - . ID=gene-LP088_RS11290;Name=LP088_RS11290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11290;old_locus_tag=LP088_11190 NZ_CP087814.1 Protein Homology CDS 2215803 2216288 . - 0 ID=cds-WP_112741839.1;Parent=gene-LP088_RS11290;Dbxref=Genbank:WP_112741839.1;Name=WP_112741839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019672236.1;locus_tag=LP088_RS11290;product=peptidylprolyl isomerase;protein_id=WP_112741839.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2216367 2217194 . - . ID=gene-LP088_RS11295;Name=LP088_RS11295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11295;old_locus_tag=LP088_11195 NZ_CP087814.1 Protein Homology CDS 2216367 2217194 . - 0 ID=cds-WP_112741838.1;Parent=gene-LP088_RS11295;Dbxref=Genbank:WP_112741838.1;Name=WP_112741838.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015297.2;locus_tag=LP088_RS11295;product=CoA ester lyase;protein_id=WP_112741838.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2217521 2218090 . - . ID=gene-LP088_RS11300;Name=LP088_RS11300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11300;old_locus_tag=LP088_11200 NZ_CP087814.1 Protein Homology CDS 2217521 2218090 . - 0 ID=cds-WP_112741837.1;Parent=gene-LP088_RS11300;Dbxref=Genbank:WP_112741837.1;Name=WP_112741837.1;Ontology_term=GO:0009055,GO:0020037;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003658638.1;locus_tag=LP088_RS11300;product=c-type cytochrome;protein_id=WP_112741837.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2218226 2218429 . - . ID=gene-LP088_RS11305;Name=LP088_RS11305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11305;old_locus_tag=LP088_11205 NZ_CP087814.1 GeneMarkS-2+ CDS 2218226 2218429 . - 0 ID=cds-WP_264675961.1;Parent=gene-LP088_RS11305;Dbxref=Genbank:WP_264675961.1;Name=WP_264675961.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS11305;product=hypothetical protein;protein_id=WP_264675961.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2218566 2221373 . + . ID=gene-LP088_RS11310;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=LP088_RS11310;old_locus_tag=LP088_11210 NZ_CP087814.1 Protein Homology CDS 2218566 2221373 . + 0 ID=cds-WP_112741835.1;Parent=gene-LP088_RS11310;Dbxref=Genbank:WP_112741835.1;Name=WP_112741835.1;Ontology_term=GO:0006428,GO:0004822,GO:0005737;gbkey=CDS;gene=ileS;go_component=cytoplasm|0005737||IEA;go_function=isoleucine-tRNA ligase activity|0004822||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011961109.1;locus_tag=LP088_RS11310;product=isoleucine--tRNA ligase;protein_id=WP_112741835.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2221441 2221695 . + . ID=gene-LP088_RS11315;Name=LP088_RS11315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11315;old_locus_tag=LP088_11215 NZ_CP087814.1 GeneMarkS-2+ CDS 2221441 2221695 . + 0 ID=cds-WP_078273413.1;Parent=gene-LP088_RS11315;Dbxref=Genbank:WP_078273413.1;Name=WP_078273413.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS11315;product=hypothetical protein;protein_id=WP_078273413.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2221789 2222127 . + . ID=gene-LP088_RS11320;Name=LP088_RS11320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11320;old_locus_tag=LP088_11220 NZ_CP087814.1 GeneMarkS-2+ CDS 2221789 2222127 . + 0 ID=cds-WP_162860342.1;Parent=gene-LP088_RS11320;Dbxref=Genbank:WP_162860342.1;Name=WP_162860342.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS11320;product=hypothetical protein;protein_id=WP_162860342.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2222183 2222500 . + . ID=gene-LP088_RS11325;Name=LP088_RS11325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11325;old_locus_tag=LP088_11225 NZ_CP087814.1 GeneMarkS-2+ CDS 2222183 2222500 . + 0 ID=cds-WP_264675962.1;Parent=gene-LP088_RS11325;Dbxref=Genbank:WP_264675962.1;Name=WP_264675962.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS11325;product=hypothetical protein;protein_id=WP_264675962.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2222603 2222893 . + . ID=gene-LP088_RS11330;Name=LP088_RS11330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11330;old_locus_tag=LP088_11230 NZ_CP087814.1 Protein Homology CDS 2222603 2222893 . + 0 ID=cds-WP_264675963.1;Parent=gene-LP088_RS11330;Dbxref=Genbank:WP_264675963.1;Name=WP_264675963.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012792.2;locus_tag=LP088_RS11330;product=GNAT family N-acetyltransferase;protein_id=WP_264675963.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2223020 2223646 . + . ID=gene-LP088_RS11335;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=LP088_RS11335;old_locus_tag=LP088_11235 NZ_CP087814.1 Protein Homology CDS 2223020 2223646 . + 0 ID=cds-WP_264675964.1;Parent=gene-LP088_RS11335;Dbxref=Genbank:WP_264675964.1;Name=WP_264675964.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520220.1;locus_tag=LP088_RS11335;product=signal peptidase II;protein_id=WP_264675964.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2223915 2228387 . + . ID=gene-LP088_RS11340;Name=LP088_RS11340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11340;old_locus_tag=LP088_11240 NZ_CP087814.1 Protein Homology CDS 2223915 2228387 . + 0 ID=cds-WP_264675965.1;Parent=gene-LP088_RS11340;Dbxref=Genbank:WP_264675965.1;Name=WP_264675965.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF012311.2;locus_tag=LP088_RS11340;product=S8 family serine peptidase;protein_id=WP_264675965.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2228446 2229210 . - . ID=gene-LP088_RS11345;Name=LP088_RS11345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11345;old_locus_tag=LP088_11245 NZ_CP087814.1 Protein Homology CDS 2228446 2229210 . - 0 ID=cds-WP_115368629.1;Parent=gene-LP088_RS11345;Dbxref=Genbank:WP_115368629.1;Name=WP_115368629.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014035.2;locus_tag=LP088_RS11345;product=sulfite exporter TauE/SafE family protein;protein_id=WP_115368629.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2229354 2229602 . - . ID=gene-LP088_RS11350;Name=LP088_RS11350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11350;old_locus_tag=LP088_11250 NZ_CP087814.1 Protein Homology CDS 2229354 2229602 . - 0 ID=cds-WP_078273421.1;Parent=gene-LP088_RS11350;Dbxref=Genbank:WP_078273421.1;Name=WP_078273421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657663.1;locus_tag=LP088_RS11350;product=DUF2789 domain-containing protein;protein_id=WP_078273421.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2229725 2230222 . - . ID=gene-LP088_RS11355;Name=LP088_RS11355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11355;old_locus_tag=LP088_11255 NZ_CP087814.1 Protein Homology CDS 2229725 2230222 . - 0 ID=cds-WP_228157765.1;Parent=gene-LP088_RS11355;Dbxref=Genbank:WP_228157765.1;Name=WP_228157765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011959627.1;locus_tag=LP088_RS11355;product=YggT family protein;protein_id=WP_228157765.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2230583 2231425 . - . ID=gene-LP088_RS11360;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=LP088_RS11360;old_locus_tag=LP088_11260 NZ_CP087814.1 Protein Homology CDS 2230583 2231425 . - 0 ID=cds-WP_078273423.1;Parent=gene-LP088_RS11360;Dbxref=Genbank:WP_078273423.1;Name=WP_078273423.1;Ontology_term=GO:0006561,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657029.1;locus_tag=LP088_RS11360;product=pyrroline-5-carboxylate reductase;protein_id=WP_078273423.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2231501 2232955 . - . ID=gene-LP088_RS11365;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=LP088_RS11365;old_locus_tag=LP088_11265 NZ_CP087814.1 Protein Homology CDS 2231501 2232955 . - 0 ID=cds-WP_264675966.1;Parent=gene-LP088_RS11365;Dbxref=Genbank:WP_264675966.1;Name=WP_264675966.1;Ontology_term=GO:0006400,GO:0016879;gbkey=CDS;gene=tilS;go_function=ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: protein motif:HMM:TIGR02432.1;locus_tag=LP088_RS11365;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_264675966.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2232957 2234849 . - . ID=gene-LP088_RS11370;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=LP088_RS11370;old_locus_tag=LP088_11270 NZ_CP087814.1 Protein Homology CDS 2232957 2234849 . - 0 ID=cds-WP_112741831.1;Parent=gene-LP088_RS11370;Dbxref=Genbank:WP_112741831.1;Name=WP_112741831.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parE;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657180.1;locus_tag=LP088_RS11370;product=DNA topoisomerase IV subunit B;protein_id=WP_112741831.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2234931 2235554 . - . ID=gene-LP088_RS11375;Name=LP088_RS11375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11375;old_locus_tag=LP088_11275 NZ_CP087814.1 Protein Homology CDS 2234931 2235554 . - 0 ID=cds-WP_162860341.1;Parent=gene-LP088_RS11375;Dbxref=Genbank:WP_162860341.1;Name=WP_162860341.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF024242.2;locus_tag=LP088_RS11375;product=helix-turn-helix domain-containing protein;protein_id=WP_162860341.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2235538 2235888 . - . ID=gene-LP088_RS11380;Name=LP088_RS11380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11380;old_locus_tag=LP088_11280 NZ_CP087814.1 GeneMarkS-2+ CDS 2235538 2235888 . - 0 ID=cds-WP_264675967.1;Parent=gene-LP088_RS11380;Dbxref=Genbank:WP_264675967.1;Name=WP_264675967.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS11380;product=hypothetical protein;protein_id=WP_264675967.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2236459 2236722 . - . ID=gene-LP088_RS11385;Name=LP088_RS11385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11385;old_locus_tag=LP088_11285 NZ_CP087814.1 GeneMarkS-2+ CDS 2236459 2236722 . - 0 ID=cds-WP_112741828.1;Parent=gene-LP088_RS11385;Dbxref=Genbank:WP_112741828.1;Name=WP_112741828.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS11385;product=hypothetical protein;protein_id=WP_112741828.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2236882 2237043 . + . ID=gene-LP088_RS11390;Name=LP088_RS11390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11390;old_locus_tag=LP088_11290 NZ_CP087814.1 GeneMarkS-2+ CDS 2236882 2237043 . + 0 ID=cds-WP_158079600.1;Parent=gene-LP088_RS11390;Dbxref=Genbank:WP_158079600.1;Name=WP_158079600.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS11390;product=hypothetical protein;protein_id=WP_158079600.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2237043 2237381 . + . ID=gene-LP088_RS11395;Name=LP088_RS11395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11395;old_locus_tag=LP088_11295 NZ_CP087814.1 Protein Homology CDS 2237043 2237381 . + 0 ID=cds-WP_264675968.1;Parent=gene-LP088_RS11395;Dbxref=Genbank:WP_264675968.1;Name=WP_264675968.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013053.2;locus_tag=LP088_RS11395;product=isochorismatase family protein;protein_id=WP_264675968.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2237434 2237934 . - . ID=gene-LP088_RS11400;Name=LP088_RS11400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11400;old_locus_tag=LP088_11300 NZ_CP087814.1 Protein Homology CDS 2237434 2237934 . - 0 ID=cds-WP_208624072.1;Parent=gene-LP088_RS11400;Dbxref=Genbank:WP_208624072.1;Name=WP_208624072.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015431.2;locus_tag=LP088_RS11400;product=LysR substrate-binding domain-containing protein;protein_id=WP_208624072.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2237947 2238129 . - . ID=gene-LP088_RS11405;Name=LP088_RS11405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11405;old_locus_tag=LP088_11305 NZ_CP087814.1 GeneMarkS-2+ CDS 2237947 2238129 . - 0 ID=cds-WP_208624114.1;Parent=gene-LP088_RS11405;Dbxref=Genbank:WP_208624114.1;Name=WP_208624114.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS11405;product=hypothetical protein;protein_id=WP_208624114.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2238299 2239543 . - . ID=gene-LP088_RS11410;Name=LP088_RS11410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11410;old_locus_tag=LP088_11310 NZ_CP087814.1 Protein Homology CDS 2238299 2239543 . - 0 ID=cds-WP_112741826.1;Parent=gene-LP088_RS11410;Dbxref=Genbank:WP_112741826.1;Name=WP_112741826.1;Ontology_term=GO:0009294;gbkey=CDS;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005401557.1;locus_tag=LP088_RS11410;product=DNA-processing protein DprA;protein_id=WP_112741826.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2239722 2240675 . - . ID=gene-LP088_RS11415;Name=LP088_RS11415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11415;old_locus_tag=LP088_11315 NZ_CP087814.1 GeneMarkS-2+ CDS 2239722 2240675 . - 0 ID=cds-WP_228157764.1;Parent=gene-LP088_RS11415;Dbxref=Genbank:WP_228157764.1;Name=WP_228157764.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS11415;product=hypothetical protein;protein_id=WP_228157764.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2240594 2241415 . - . ID=gene-LP088_RS11420;Name=LP088_RS11420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11420;old_locus_tag=LP088_11320 NZ_CP087814.1 Protein Homology CDS 2240594 2241415 . - 0 ID=cds-WP_264676345.1;Parent=gene-LP088_RS11420;Dbxref=Genbank:WP_264676345.1;Name=WP_264676345.1;Ontology_term=GO:0003676,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012492.2;locus_tag=LP088_RS11420;product=DEAD/DEAH box helicase;protein_id=WP_264676345.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2241375 2241623 . - . ID=gene-LP088_RS11425;Name=LP088_RS11425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11425;old_locus_tag=LP088_11325 NZ_CP087814.1 GeneMarkS-2+ CDS 2241375 2241623 . - 0 ID=cds-WP_228157763.1;Parent=gene-LP088_RS11425;Dbxref=Genbank:WP_228157763.1;Name=WP_228157763.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS11425;product=hypothetical protein;protein_id=WP_228157763.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2241788 2242069 . + . ID=gene-LP088_RS11430;Name=LP088_RS11430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11430;old_locus_tag=LP088_11330 NZ_CP087814.1 GeneMarkS-2+ CDS 2241788 2242069 . + 0 ID=cds-WP_078273430.1;Parent=gene-LP088_RS11430;Dbxref=Genbank:WP_078273430.1;Name=WP_078273430.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS11430;product=hypothetical protein;protein_id=WP_078273430.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2242069 2242479 . + . ID=gene-LP088_RS11435;Name=LP088_RS11435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11435;old_locus_tag=LP088_11335 NZ_CP087814.1 Protein Homology CDS 2242069 2242479 . + 0 ID=cds-WP_078273431.1;Parent=gene-LP088_RS11435;Dbxref=Genbank:WP_078273431.1;Name=WP_078273431.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019474.2;locus_tag=LP088_RS11435;product=alpha/beta hydrolase;protein_id=WP_078273431.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2242519 2242728 . + . ID=gene-LP088_RS11440;Name=LP088_RS11440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11440;old_locus_tag=LP088_11340 NZ_CP087814.1 GeneMarkS-2+ CDS 2242519 2242728 . + 0 ID=cds-WP_112741823.1;Parent=gene-LP088_RS11440;Dbxref=Genbank:WP_112741823.1;Name=WP_112741823.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS11440;product=hypothetical protein;protein_id=WP_112741823.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2242689 2242814 . + . ID=gene-LP088_RS11445;Name=LP088_RS11445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11445 NZ_CP087814.1 GeneMarkS-2+ CDS 2242689 2242814 . + 0 ID=cds-WP_264675969.1;Parent=gene-LP088_RS11445;Dbxref=Genbank:WP_264675969.1;Name=WP_264675969.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS11445;product=hypothetical protein;protein_id=WP_264675969.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2242923 2244914 . - . ID=gene-LP088_RS11450;Name=betT;gbkey=Gene;gene=betT;gene_biotype=protein_coding;locus_tag=LP088_RS11450;old_locus_tag=LP088_11345 NZ_CP087814.1 Protein Homology CDS 2242923 2244914 . - 0 ID=cds-WP_112741822.1;Parent=gene-LP088_RS11450;Dbxref=Genbank:WP_112741822.1;Name=WP_112741822.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;gene=betT;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005009642.1;locus_tag=LP088_RS11450;product=choline BCCT transporter BetT;protein_id=WP_112741822.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2245283 2245885 . - . ID=gene-LP088_RS11455;Name=LP088_RS11455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11455;old_locus_tag=LP088_11350 NZ_CP087814.1 Protein Homology CDS 2245283 2245885 . - 0 ID=cds-WP_112741821.1;Parent=gene-LP088_RS11455;Dbxref=Genbank:WP_112741821.1;Name=WP_112741821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003673426.1;locus_tag=LP088_RS11455;product=hypothetical protein;protein_id=WP_112741821.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2245961 2246722 . - . ID=gene-LP088_RS11460;Name=LP088_RS11460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11460;old_locus_tag=LP088_11355 NZ_CP087814.1 Protein Homology CDS 2245961 2246722 . - 0 ID=cds-WP_208624034.1-4;Parent=gene-LP088_RS11460;Dbxref=Genbank:WP_208624034.1;Name=WP_208624034.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF012870.2;locus_tag=LP088_RS11460;product=DDE-type integrase/transposase/recombinase;protein_id=WP_208624034.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2246980 2247231 . + . ID=gene-LP088_RS11465;Name=LP088_RS11465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11465;old_locus_tag=LP088_11360 NZ_CP087814.1 Protein Homology CDS 2246980 2247231 . + 0 ID=cds-WP_208624070.1;Parent=gene-LP088_RS11465;Dbxref=Genbank:WP_208624070.1;Name=WP_208624070.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018630.2;locus_tag=LP088_RS11465;product=DUF1289 domain-containing protein;protein_id=WP_208624070.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2247348 2248514 . - . ID=gene-LP088_RS11470;Name=LP088_RS11470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11470;old_locus_tag=LP088_11365 NZ_CP087814.1 Protein Homology CDS 2247348 2248514 . - 0 ID=cds-WP_078275180.1;Parent=gene-LP088_RS11470;Dbxref=Genbank:WP_078275180.1;Name=WP_078275180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657254.1;locus_tag=LP088_RS11470;product=DUF1615 family protein;protein_id=WP_078275180.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2248618 2249553 . - . ID=gene-LP088_RS11475;Name=LP088_RS11475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11475;old_locus_tag=LP088_11370 NZ_CP087814.1 Protein Homology CDS 2248618 2249553 . - 0 ID=cds-WP_112741819.1;Parent=gene-LP088_RS11475;Dbxref=Genbank:WP_112741819.1;Name=WP_112741819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009766961.1;locus_tag=LP088_RS11475;product=acyl-CoA thioesterase II;protein_id=WP_112741819.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2249722 2252352 . + . ID=gene-LP088_RS11480;Name=plsB;gbkey=Gene;gene=plsB;gene_biotype=protein_coding;locus_tag=LP088_RS11480;old_locus_tag=LP088_11375 NZ_CP087814.1 Protein Homology CDS 2249722 2252352 . + 0 ID=cds-WP_112741818.1;Parent=gene-LP088_RS11480;Dbxref=Genbank:WP_112741818.1;Name=WP_112741818.1;Ontology_term=GO:0008654,GO:0004366;gbkey=CDS;gene=plsB;go_function=glycerol-3-phosphate O-acyltransferase activity|0004366||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003663459.1;locus_tag=LP088_RS11480;product=glycerol-3-phosphate 1-O-acyltransferase PlsB;protein_id=WP_112741818.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2252770 2253408 . + . ID=gene-LP088_RS11485;Name=LP088_RS11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11485;old_locus_tag=LP088_11380 NZ_CP087814.1 Protein Homology CDS 2252770 2253408 . + 0 ID=cds-WP_078275150.1;Parent=gene-LP088_RS11485;Dbxref=Genbank:WP_078275150.1;Name=WP_078275150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520633.1;locus_tag=LP088_RS11485;product=lysophospholipid acyltransferase family protein;protein_id=WP_078275150.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2253645 2263559 . - . ID=gene-LP088_RS11490;Name=LP088_RS11490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11490;old_locus_tag=LP088_11385 NZ_CP087814.1 Protein Homology CDS 2253645 2263559 . - 0 ID=cds-WP_264675970.1;Parent=gene-LP088_RS11490;Dbxref=Genbank:WP_264675970.1;Name=WP_264675970.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039533.1;locus_tag=LP088_RS11490;product=SwmB domain-containing protein;protein_id=WP_264675970.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2263593 2264042 . - . ID=gene-LP088_RS11495;Name=LP088_RS11495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11495;old_locus_tag=LP088_11390 NZ_CP087814.1 Protein Homology CDS 2263593 2264042 . - 0 ID=cds-WP_264690327.1;Parent=gene-LP088_RS11495;Dbxref=Genbank:WP_264690327.1;Name=WP_264690327.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012894.2;locus_tag=LP088_RS11495;product=OmpA family protein;protein_id=WP_264690327.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2263978 2264535 . - . ID=gene-LP088_RS11500;Name=LP088_RS11500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11500;old_locus_tag=LP088_11395 NZ_CP087814.1 GeneMarkS-2+ CDS 2263978 2264535 . - 0 ID=cds-WP_264690328.1;Parent=gene-LP088_RS11500;Dbxref=Genbank:WP_264690328.1;Name=WP_264690328.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS11500;product=hypothetical protein;protein_id=WP_264690328.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2265577 2265651 . - . ID=gene-LP088_RS11505;Name=LP088_RS11505;gbkey=Gene;gene_biotype=tRNA;locus_tag=LP088_RS11505;old_locus_tag=LP088_11400 NZ_CP087814.1 tRNAscan-SE tRNA 2265577 2265651 . - . ID=rna-LP088_RS11505;Parent=gene-LP088_RS11505;anticodon=(pos:complement(2265617..2265619));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS11505;product=tRNA-Thr NZ_CP087814.1 tRNAscan-SE exon 2265577 2265651 . - . ID=exon-LP088_RS11505-1;Parent=rna-LP088_RS11505;anticodon=(pos:complement(2265617..2265619));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS11505;product=tRNA-Thr NZ_CP087814.1 RefSeq gene 2265671 2265744 . - . ID=gene-LP088_RS11510;Name=LP088_RS11510;gbkey=Gene;gene_biotype=tRNA;locus_tag=LP088_RS11510;old_locus_tag=LP088_11405 NZ_CP087814.1 tRNAscan-SE tRNA 2265671 2265744 . - . ID=rna-LP088_RS11510;Parent=gene-LP088_RS11510;anticodon=(pos:complement(2265710..2265712));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS11510;product=tRNA-Gly NZ_CP087814.1 tRNAscan-SE exon 2265671 2265744 . - . ID=exon-LP088_RS11510-1;Parent=rna-LP088_RS11510;anticodon=(pos:complement(2265710..2265712));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS11510;product=tRNA-Gly NZ_CP087814.1 RefSeq gene 2265768 2265851 . - . ID=gene-LP088_RS11515;Name=LP088_RS11515;gbkey=Gene;gene_biotype=tRNA;locus_tag=LP088_RS11515;old_locus_tag=LP088_11410 NZ_CP087814.1 tRNAscan-SE tRNA 2265768 2265851 . - . ID=rna-LP088_RS11515;Parent=gene-LP088_RS11515;anticodon=(pos:complement(2265815..2265817));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS11515;product=tRNA-Tyr NZ_CP087814.1 tRNAscan-SE exon 2265768 2265851 . - . ID=exon-LP088_RS11515-1;Parent=rna-LP088_RS11515;anticodon=(pos:complement(2265815..2265817));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS11515;product=tRNA-Tyr NZ_CP087814.1 RefSeq gene 2265934 2266009 . - . ID=gene-LP088_RS11520;Name=LP088_RS11520;gbkey=Gene;gene_biotype=tRNA;locus_tag=LP088_RS11520;old_locus_tag=LP088_11415 NZ_CP087814.1 tRNAscan-SE tRNA 2265934 2266009 . - . ID=rna-LP088_RS11520;Parent=gene-LP088_RS11520;anticodon=(pos:complement(2265974..2265976));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS11520;product=tRNA-Thr NZ_CP087814.1 tRNAscan-SE exon 2265934 2266009 . - . ID=exon-LP088_RS11520-1;Parent=rna-LP088_RS11520;anticodon=(pos:complement(2265974..2265976));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS11520;product=tRNA-Thr NZ_CP087814.1 RefSeq gene 2266227 2266589 . + . ID=gene-LP088_RS11525;Name=LP088_RS11525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11525 NZ_CP087814.1 Protein Homology CDS 2266227 2266589 . + 0 ID=cds-WP_245952190.1;Parent=gene-LP088_RS11525;Dbxref=Genbank:WP_245952190.1;Name=WP_245952190.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024937.2;locus_tag=LP088_RS11525;product=DUF4126 domain-containing protein;protein_id=WP_245952190.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2266585 2266809 . + . ID=gene-LP088_RS11530;Name=LP088_RS11530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11530 NZ_CP087814.1 Protein Homology CDS 2266585 2266809 . + 0 ID=cds-WP_245952236.1;Parent=gene-LP088_RS11530;Dbxref=Genbank:WP_245952236.1;Name=WP_245952236.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024937.2;locus_tag=LP088_RS11530;product=DUF4126 family protein;protein_id=WP_245952236.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2266884 2268005 . + . ID=gene-LP088_RS11535;Name=LP088_RS11535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11535;old_locus_tag=LP088_11425 NZ_CP087814.1 Protein Homology CDS 2266884 2268005 . + 0 ID=cds-WP_078275154.1;Parent=gene-LP088_RS11535;Dbxref=Genbank:WP_078275154.1;Name=WP_078275154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003667007.1;locus_tag=LP088_RS11535;product=aminotransferase class V-fold PLP-dependent enzyme;protein_id=WP_078275154.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2268065 2268910 . - . ID=gene-LP088_RS11540;Name=LP088_RS11540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11540;old_locus_tag=LP088_11430 NZ_CP087814.1 GeneMarkS-2+ CDS 2268065 2268910 . - 0 ID=cds-WP_208624068.1;Parent=gene-LP088_RS11540;Dbxref=Genbank:WP_208624068.1;Name=WP_208624068.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS11540;product=hypothetical protein;protein_id=WP_208624068.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2268926 2269174 . - . ID=gene-LP088_RS11545;Name=LP088_RS11545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11545;old_locus_tag=LP088_11435 NZ_CP087814.1 GeneMarkS-2+ CDS 2268926 2269174 . - 0 ID=cds-WP_208624067.1;Parent=gene-LP088_RS11545;Dbxref=Genbank:WP_208624067.1;Name=WP_208624067.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS11545;product=hypothetical protein;protein_id=WP_208624067.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2269224 2269607 . - . ID=gene-LP088_RS11550;Name=LP088_RS11550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11550;old_locus_tag=LP088_11440 NZ_CP087814.1 GeneMarkS-2+ CDS 2269224 2269607 . - 0 ID=cds-WP_208624066.1;Parent=gene-LP088_RS11550;Dbxref=Genbank:WP_208624066.1;Name=WP_208624066.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS11550;product=hypothetical protein;protein_id=WP_208624066.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2269693 2270505 . - . ID=gene-LP088_RS11555;Name=LP088_RS11555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11555;old_locus_tag=LP088_11445 NZ_CP087814.1 Protein Homology CDS 2269693 2270505 . - 0 ID=cds-WP_078275155.1;Parent=gene-LP088_RS11555;Dbxref=Genbank:WP_078275155.1;Name=WP_078275155.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010327651.1;locus_tag=LP088_RS11555;product=methyltransferase domain-containing protein;protein_id=WP_078275155.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2270538 2271086 . - . ID=gene-LP088_RS11560;Name=LP088_RS11560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11560;old_locus_tag=LP088_11450 NZ_CP087814.1 GeneMarkS-2+ CDS 2270538 2271086 . - 0 ID=cds-WP_078275156.1;Parent=gene-LP088_RS11560;Dbxref=Genbank:WP_078275156.1;Name=WP_078275156.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS11560;product=hypothetical protein;protein_id=WP_078275156.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2271083 2271589 . - . ID=gene-LP088_RS11565;Name=LP088_RS11565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11565;old_locus_tag=LP088_11455 NZ_CP087814.1 GeneMarkS-2+ CDS 2271083 2271589 . - 0 ID=cds-WP_078275157.1;Parent=gene-LP088_RS11565;Dbxref=Genbank:WP_078275157.1;Name=WP_078275157.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS11565;product=hypothetical protein;protein_id=WP_078275157.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2271698 2271904 . - . ID=gene-LP088_RS11570;Name=LP088_RS11570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11570;old_locus_tag=LP088_11460 NZ_CP087814.1 GeneMarkS-2+ CDS 2271698 2271904 . - 0 ID=cds-WP_078275158.1;Parent=gene-LP088_RS11570;Dbxref=Genbank:WP_078275158.1;Name=WP_078275158.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS11570;product=hypothetical protein;protein_id=WP_078275158.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2271873 2272322 . - . ID=gene-LP088_RS11575;Name=LP088_RS11575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11575;old_locus_tag=LP088_11465 NZ_CP087814.1 Protein Homology CDS 2271873 2272322 . - 0 ID=cds-WP_264675971.1;Parent=gene-LP088_RS11575;Dbxref=Genbank:WP_264675971.1;Name=WP_264675971.1;Ontology_term=GO:0004521,GO:0005515;gbkey=CDS;go_function=endoribonuclease activity|0004521||IEA,protein binding|0005515||IEA;inference=COORDINATES: protein motif:HMM:NF024861.2;locus_tag=LP088_RS11575;product=putative toxin-antitoxin system toxin component%2C PIN family;protein_id=WP_264675971.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2272346 2273932 . - . ID=gene-LP088_RS11580;Name=LP088_RS11580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11580;old_locus_tag=LP088_11470 NZ_CP087814.1 Protein Homology CDS 2272346 2273932 . - 0 ID=cds-WP_264675972.1;Parent=gene-LP088_RS11580;Dbxref=Genbank:WP_264675972.1;Name=WP_264675972.1;Ontology_term=GO:0006415,GO:0003924;gbkey=CDS;go_function=GTPase activity|0003924||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003658694.1;locus_tag=LP088_RS11580;product=peptide chain release factor 3;protein_id=WP_264675972.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2274370 2274561 . - . ID=gene-LP088_RS11585;Name=LP088_RS11585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11585;old_locus_tag=LP088_11475 NZ_CP087814.1 GeneMarkS-2+ CDS 2274370 2274561 . - 0 ID=cds-WP_264675973.1;Parent=gene-LP088_RS11585;Dbxref=Genbank:WP_264675973.1;Name=WP_264675973.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS11585;product=hypothetical protein;protein_id=WP_264675973.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2274510 2275028 . - . ID=gene-LP088_RS11590;Name=LP088_RS11590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11590;old_locus_tag=LP088_11480 NZ_CP087814.1 Protein Homology CDS 2274510 2275028 . - 0 ID=cds-WP_264675974.1;Parent=gene-LP088_RS11590;Dbxref=Genbank:WP_264675974.1;Name=WP_264675974.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013077.2;locus_tag=LP088_RS11590;product=nitroreductase family protein;protein_id=WP_264675974.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2275167 2276231 . - . ID=gene-LP088_RS11595;Name=LP088_RS11595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11595;old_locus_tag=LP088_11485 NZ_CP087814.1 GeneMarkS-2+ CDS 2275167 2276231 . - 0 ID=cds-WP_264675975.1;Parent=gene-LP088_RS11595;Dbxref=Genbank:WP_264675975.1;Name=WP_264675975.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS11595;product=hypothetical protein;protein_id=WP_264675975.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 2276271 2276996 . - . ID=gene-LP088_RS11600;Name=LP088_RS11600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS11600;old_locus_tag=LP088_11490;pseudo=true NZ_CP087814.1 Protein Homology CDS 2276271 2276996 . - 0 ID=cds-LP088_RS11600;Parent=gene-LP088_RS11600;Note=internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012927.2;locus_tag=LP088_RS11600;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP087814.1 RefSeq gene 2276902 2277261 . - . ID=gene-LP088_RS11605;Name=LP088_RS11605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11605 NZ_CP087814.1 Protein Homology CDS 2276902 2277261 . - 0 ID=cds-WP_264675976.1;Parent=gene-LP088_RS11605;Dbxref=Genbank:WP_264675976.1;Name=WP_264675976.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012927.2;locus_tag=LP088_RS11605;product=hypothetical protein;protein_id=WP_264675976.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2277494 2279038 . + . ID=gene-LP088_RS11610;Name=LP088_RS11610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11610;old_locus_tag=LP088_11495 NZ_CP087814.1 Protein Homology CDS 2277494 2279038 . + 0 ID=cds-WP_264675977.1;Parent=gene-LP088_RS11610;Dbxref=Genbank:WP_264675977.1;Name=WP_264675977.1;Ontology_term=GO:0006306,GO:0009307,GO:0009007,GO:0015666;gbkey=CDS;go_function=site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA,restriction endodeoxyribonuclease activity|0015666||IEA;go_process=DNA methylation|0006306||IEA,DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019671869.1;locus_tag=LP088_RS11610;product=type I restriction-modification system subunit M;protein_id=WP_264675977.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2279035 2280231 . + . ID=gene-LP088_RS11615;Name=LP088_RS11615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11615;old_locus_tag=LP088_11500 NZ_CP087814.1 Protein Homology CDS 2279035 2280231 . + 0 ID=cds-WP_264676746.1;Parent=gene-LP088_RS11615;Dbxref=Genbank:WP_264676746.1;Name=WP_264676746.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: protein motif:HMM:NF013579.2;locus_tag=LP088_RS11615;product=restriction endonuclease subunit S;protein_id=WP_264676746.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2280380 2281441 . + . ID=gene-LP088_RS11620;Name=LP088_RS11620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11620;old_locus_tag=LP088_11505 NZ_CP087814.1 Protein Homology CDS 2280380 2281441 . + 0 ID=cds-WP_264675979.1;Parent=gene-LP088_RS11620;Dbxref=Genbank:WP_264675979.1;Name=WP_264675979.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014691.2;locus_tag=LP088_RS11620;product=Fic family protein;protein_id=WP_264675979.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2281473 2284574 . + . ID=gene-LP088_RS11625;Name=LP088_RS11625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11625;old_locus_tag=LP088_11510 NZ_CP087814.1 Protein Homology CDS 2281473 2284574 . + 0 ID=cds-WP_264675980.1;Parent=gene-LP088_RS11625;Dbxref=Genbank:WP_264675980.1;Name=WP_264675980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004669926.1;locus_tag=LP088_RS11625;product=type I restriction endonuclease subunit R;protein_id=WP_264675980.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2284577 2285482 . + . ID=gene-LP088_RS11630;Name=LP088_RS11630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11630;old_locus_tag=LP088_11515 NZ_CP087814.1 Protein Homology CDS 2284577 2285482 . + 0 ID=cds-WP_112741812.1;Parent=gene-LP088_RS11630;Dbxref=Genbank:WP_112741812.1;Name=WP_112741812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003666166.1;locus_tag=LP088_RS11630;product=LysR family transcriptional regulator;protein_id=WP_112741812.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2285642 2285845 . - . ID=gene-LP088_RS11635;Name=LP088_RS11635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11635;old_locus_tag=LP088_11520 NZ_CP087814.1 GeneMarkS-2+ CDS 2285642 2285845 . - 0 ID=cds-WP_143821742.1;Parent=gene-LP088_RS11635;Dbxref=Genbank:WP_143821742.1;Name=WP_143821742.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS11635;product=hypothetical protein;protein_id=WP_143821742.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2285836 2286618 . - . ID=gene-LP088_RS11640;Name=LP088_RS11640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11640;old_locus_tag=LP088_11525 NZ_CP087814.1 Protein Homology CDS 2285836 2286618 . - 0 ID=cds-WP_078275168.1;Parent=gene-LP088_RS11640;Dbxref=Genbank:WP_078275168.1;Name=WP_078275168.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004645147.1;locus_tag=LP088_RS11640;product=crotonase/enoyl-CoA hydratase family protein;protein_id=WP_078275168.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2286639 2289716 . - . ID=gene-LP088_RS11645;Name=LP088_RS11645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11645;old_locus_tag=LP088_11530 NZ_CP087814.1 Protein Homology CDS 2286639 2289716 . - 0 ID=cds-WP_264675981.1;Parent=gene-LP088_RS11645;Dbxref=Genbank:WP_264675981.1;Name=WP_264675981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004462830.1;locus_tag=LP088_RS11645;product=ATP-binding protein;protein_id=WP_264675981.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2289893 2290810 . + . ID=gene-LP088_RS11650;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=LP088_RS11650;old_locus_tag=LP088_11535 NZ_CP087814.1 Protein Homology CDS 2289893 2290810 . + 0 ID=cds-WP_078275170.1;Parent=gene-LP088_RS11650;Dbxref=Genbank:WP_078275170.1;Name=WP_078275170.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysM;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003673512.1;locus_tag=LP088_RS11650;product=cysteine synthase CysM;protein_id=WP_078275170.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2290843 2291613 . + . ID=gene-LP088_RS11655;Name=LP088_RS11655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11655;old_locus_tag=LP088_11540 NZ_CP087814.1 Protein Homology CDS 2290843 2291613 . + 0 ID=cds-WP_078275171.1;Parent=gene-LP088_RS11655;Dbxref=Genbank:WP_078275171.1;Name=WP_078275171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009767292.1;locus_tag=LP088_RS11655;product=3'-5' exonuclease;protein_id=WP_078275171.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2291665 2292144 . - . ID=gene-LP088_RS11660;Name=LP088_RS11660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11660;old_locus_tag=LP088_11545 NZ_CP087814.1 Protein Homology CDS 2291665 2292144 . - 0 ID=cds-WP_078275172.1;Parent=gene-LP088_RS11660;Dbxref=Genbank:WP_078275172.1;Name=WP_078275172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005154716.1;locus_tag=LP088_RS11660;product=putative molybdenum carrier protein;protein_id=WP_078275172.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2292166 2292732 . - . ID=gene-LP088_RS11665;Name=LP088_RS11665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11665;old_locus_tag=LP088_11550 NZ_CP087814.1 Protein Homology CDS 2292166 2292732 . - 0 ID=cds-WP_228157823.1;Parent=gene-LP088_RS11665;Dbxref=Genbank:WP_228157823.1;Name=WP_228157823.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018349.2;locus_tag=LP088_RS11665;product=DUF1152 domain-containing protein;protein_id=WP_228157823.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2293318 2295246 . + . ID=gene-LP088_RS11670;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=LP088_RS11670;old_locus_tag=LP088_11555 NZ_CP087814.1 Protein Homology CDS 2293318 2295246 . + 0 ID=cds-WP_112741808.1;Parent=gene-LP088_RS11670;Dbxref=Genbank:WP_112741808.1;Name=WP_112741808.1;Ontology_term=GO:0006435,GO:0004829,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520688.1;locus_tag=LP088_RS11670;product=threonine--tRNA ligase;protein_id=WP_112741808.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2295319 2296185 . + . ID=gene-LP088_RS11675;Name=LP088_RS11675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11675;old_locus_tag=LP088_11560 NZ_CP087814.1 GeneMarkS-2+ CDS 2295319 2296185 . + 0 ID=cds-WP_112741807.1;Parent=gene-LP088_RS11675;Dbxref=Genbank:WP_112741807.1;Name=WP_112741807.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS11675;product=hypothetical protein;protein_id=WP_112741807.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2296389 2296778 . + . ID=gene-LP088_RS11680;Name=LP088_RS11680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11680;old_locus_tag=LP088_11565 NZ_CP087814.1 GeneMarkS-2+ CDS 2296389 2296778 . + 0 ID=cds-WP_078275177.1;Parent=gene-LP088_RS11680;Dbxref=Genbank:WP_078275177.1;Name=WP_078275177.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS11680;product=hypothetical protein;protein_id=WP_078275177.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2296850 2297203 . + . ID=gene-LP088_RS11685;Name=LP088_RS11685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11685;old_locus_tag=LP088_11570 NZ_CP087814.1 GeneMarkS-2+ CDS 2296850 2297203 . + 0 ID=cds-WP_078275178.1;Parent=gene-LP088_RS11685;Dbxref=Genbank:WP_078275178.1;Name=WP_078275178.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS11685;product=hypothetical protein;protein_id=WP_078275178.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2297216 2297485 . + . ID=gene-LP088_RS11690;Name=LP088_RS11690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11690;old_locus_tag=LP088_11575 NZ_CP087814.1 Protein Homology CDS 2297216 2297485 . + 0 ID=cds-WP_078275179.1;Parent=gene-LP088_RS11690;Dbxref=Genbank:WP_078275179.1;Name=WP_078275179.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019844.2;locus_tag=LP088_RS11690;product=SH3 domain-containing protein;protein_id=WP_078275179.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2297689 2298225 . + . ID=gene-LP088_RS11695;Name=LP088_RS11695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11695;old_locus_tag=LP088_11580 NZ_CP087814.1 Protein Homology CDS 2297689 2298225 . + 0 ID=cds-WP_264690329.1;Parent=gene-LP088_RS11695;Dbxref=Genbank:WP_264690329.1;Name=WP_264690329.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037875.2;locus_tag=LP088_RS11695;product=hypothetical protein;protein_id=WP_264690329.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2298231 2298560 . + . ID=gene-LP088_RS11700;Name=LP088_RS11700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11700;old_locus_tag=LP088_11585 NZ_CP087814.1 GeneMarkS-2+ CDS 2298231 2298560 . + 0 ID=cds-WP_078274953.1;Parent=gene-LP088_RS11700;Dbxref=Genbank:WP_078274953.1;Name=WP_078274953.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS11700;product=hypothetical protein;protein_id=WP_078274953.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2298563 2298754 . + . ID=gene-LP088_RS11705;Name=LP088_RS11705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11705;old_locus_tag=LP088_11590 NZ_CP087814.1 GeneMarkS-2+ CDS 2298563 2298754 . + 0 ID=cds-WP_078274952.1;Parent=gene-LP088_RS11705;Dbxref=Genbank:WP_078274952.1;Name=WP_078274952.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS11705;product=hypothetical protein;protein_id=WP_078274952.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2298735 2298923 . - . ID=gene-LP088_RS11710;Name=LP088_RS11710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11710;old_locus_tag=LP088_11595 NZ_CP087814.1 GeneMarkS-2+ CDS 2298735 2298923 . - 0 ID=cds-WP_078274951.1;Parent=gene-LP088_RS11710;Dbxref=Genbank:WP_078274951.1;Name=WP_078274951.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS11710;product=hypothetical protein;protein_id=WP_078274951.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2298946 2299293 . + . ID=gene-LP088_RS11715;Name=LP088_RS11715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11715;old_locus_tag=LP088_11600 NZ_CP087814.1 GeneMarkS-2+ CDS 2298946 2299293 . + 0 ID=cds-WP_078274950.1;Parent=gene-LP088_RS11715;Dbxref=Genbank:WP_078274950.1;Name=WP_078274950.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS11715;product=hypothetical protein;protein_id=WP_078274950.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2299369 2299689 . + . ID=gene-LP088_RS11720;Name=LP088_RS11720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11720;old_locus_tag=LP088_11605 NZ_CP087814.1 GeneMarkS-2+ CDS 2299369 2299689 . + 0 ID=cds-WP_112741799.1;Parent=gene-LP088_RS11720;Dbxref=Genbank:WP_112741799.1;Name=WP_112741799.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS11720;product=hypothetical protein;protein_id=WP_112741799.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2299677 2301506 . + . ID=gene-LP088_RS11725;Name=LP088_RS11725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11725;old_locus_tag=LP088_11610 NZ_CP087814.1 GeneMarkS-2+ CDS 2299677 2301506 . + 0 ID=cds-WP_078274936.1-4;Parent=gene-LP088_RS11725;Dbxref=Genbank:WP_078274936.1;Name=WP_078274936.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS11725;product=hypothetical protein;protein_id=WP_078274936.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2301565 2301789 . + . ID=gene-LP088_RS11730;Name=LP088_RS11730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11730;old_locus_tag=LP088_11615 NZ_CP087814.1 GeneMarkS-2+ CDS 2301565 2301789 . + 0 ID=cds-WP_078274935.1-5;Parent=gene-LP088_RS11730;Dbxref=Genbank:WP_078274935.1;Name=WP_078274935.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS11730;product=DUF2190 family protein;protein_id=WP_078274935.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2302055 2302168 . - . ID=gene-LP088_RS11735;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=LP088_RS11735;old_locus_tag=LP088_11620 NZ_CP087814.1 cmsearch rRNA 2302055 2302168 . - . ID=rna-LP088_RS11735;Parent=gene-LP088_RS11735;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LP088_RS11735;product=5S ribosomal RNA NZ_CP087814.1 cmsearch exon 2302055 2302168 . - . ID=exon-LP088_RS11735-1;Parent=rna-LP088_RS11735;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LP088_RS11735;product=5S ribosomal RNA NZ_CP087814.1 RefSeq gene 2302331 2305556 . - . ID=gene-LP088_RS11740;Name=LP088_RS11740;gbkey=Gene;gene_biotype=rRNA;locus_tag=LP088_RS11740;old_locus_tag=LP088_11625 NZ_CP087814.1 cmsearch rRNA 2302331 2305556 . - . ID=rna-LP088_RS11740;Parent=gene-LP088_RS11740;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LP088_RS11740;product=23S ribosomal RNA NZ_CP087814.1 cmsearch exon 2302331 2305556 . - . ID=exon-LP088_RS11740-1;Parent=rna-LP088_RS11740;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LP088_RS11740;product=23S ribosomal RNA NZ_CP087814.1 RefSeq gene 2305873 2305948 . - . ID=gene-LP088_RS11745;Name=LP088_RS11745;gbkey=Gene;gene_biotype=tRNA;locus_tag=LP088_RS11745;old_locus_tag=LP088_11630 NZ_CP087814.1 tRNAscan-SE tRNA 2305873 2305948 . - . ID=rna-LP088_RS11745;Parent=gene-LP088_RS11745;anticodon=(pos:complement(2305913..2305915));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS11745;product=tRNA-Ala NZ_CP087814.1 tRNAscan-SE exon 2305873 2305948 . - . ID=exon-LP088_RS11745-1;Parent=rna-LP088_RS11745;anticodon=(pos:complement(2305913..2305915));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS11745;product=tRNA-Ala NZ_CP087814.1 RefSeq gene 2305954 2306030 . - . ID=gene-LP088_RS11750;Name=LP088_RS11750;gbkey=Gene;gene_biotype=tRNA;locus_tag=LP088_RS11750;old_locus_tag=LP088_11635 NZ_CP087814.1 tRNAscan-SE tRNA 2305954 2306030 . - . ID=rna-LP088_RS11750;Parent=gene-LP088_RS11750;anticodon=(pos:complement(2305994..2305996));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS11750;product=tRNA-Ile NZ_CP087814.1 tRNAscan-SE exon 2305954 2306030 . - . ID=exon-LP088_RS11750-1;Parent=rna-LP088_RS11750;anticodon=(pos:complement(2305994..2305996));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS11750;product=tRNA-Ile NZ_CP087814.1 RefSeq gene 2306092 2307622 . - . ID=gene-LP088_RS11755;Name=LP088_RS11755;gbkey=Gene;gene_biotype=rRNA;locus_tag=LP088_RS11755;old_locus_tag=LP088_11640 NZ_CP087814.1 cmsearch rRNA 2306092 2307622 . - . ID=rna-LP088_RS11755;Parent=gene-LP088_RS11755;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LP088_RS11755;product=16S ribosomal RNA NZ_CP087814.1 cmsearch exon 2306092 2307622 . - . ID=exon-LP088_RS11755-1;Parent=rna-LP088_RS11755;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LP088_RS11755;product=16S ribosomal RNA NZ_CP087814.1 RefSeq gene 2308066 2308142 . - . ID=gene-LP088_RS11760;Name=LP088_RS11760;gbkey=Gene;gene_biotype=tRNA;locus_tag=LP088_RS11760;old_locus_tag=LP088_11645 NZ_CP087814.1 tRNAscan-SE tRNA 2308066 2308142 . - . ID=rna-LP088_RS11760;Parent=gene-LP088_RS11760;anticodon=(pos:complement(2308106..2308108));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS11760;product=tRNA-Met NZ_CP087814.1 tRNAscan-SE exon 2308066 2308142 . - . ID=exon-LP088_RS11760-1;Parent=rna-LP088_RS11760;anticodon=(pos:complement(2308106..2308108));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS11760;product=tRNA-Met NZ_CP087814.1 RefSeq gene 2308220 2308658 . - . ID=gene-LP088_RS11765;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=LP088_RS11765;old_locus_tag=LP088_11650 NZ_CP087814.1 cmsearch RNase_P_RNA 2308220 2308658 . - . ID=rna-LP088_RS11765;Parent=gene-LP088_RS11765;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LP088_RS11765;product=RNase P RNA component class A NZ_CP087814.1 cmsearch exon 2308220 2308658 . - . ID=exon-LP088_RS11765-1;Parent=rna-LP088_RS11765;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LP088_RS11765;product=RNase P RNA component class A NZ_CP087814.1 RefSeq gene 2309403 2310137 . + . ID=gene-LP088_RS11770;Name=LP088_RS11770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11770;old_locus_tag=LP088_11655 NZ_CP087814.1 Protein Homology CDS 2309403 2310137 . + 0 ID=cds-WP_112741797.1;Parent=gene-LP088_RS11770;Dbxref=Genbank:WP_112741797.1;Name=WP_112741797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512472.1;locus_tag=LP088_RS11770;product=LytTR family DNA-binding domain-containing protein;protein_id=WP_112741797.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2310334 2311275 . + . ID=gene-LP088_RS11775;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=LP088_RS11775;old_locus_tag=LP088_11660 NZ_CP087814.1 Protein Homology CDS 2310334 2311275 . + 0 ID=cds-WP_078275181.1;Parent=gene-LP088_RS11775;Dbxref=Genbank:WP_078275181.1;Name=WP_078275181.1;Ontology_term=GO:0006779,GO:0004418,GO:0005737;gbkey=CDS;gene=hemC;go_component=cytoplasm|0005737||IEA;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519984.1;locus_tag=LP088_RS11775;product=hydroxymethylbilane synthase;protein_id=WP_078275181.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2311321 2312199 . + . ID=gene-LP088_RS11780;Name=LP088_RS11780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11780;old_locus_tag=LP088_11665 NZ_CP087814.1 Protein Homology CDS 2311321 2312199 . + 0 ID=cds-WP_112741796.1;Parent=gene-LP088_RS11780;Dbxref=Genbank:WP_112741796.1;Name=WP_112741796.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014641.2;locus_tag=LP088_RS11780;product=uroporphyrinogen-III synthase;protein_id=WP_112741796.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2312230 2313252 . + . ID=gene-LP088_RS11785;Name=LP088_RS11785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11785;old_locus_tag=LP088_11670 NZ_CP087814.1 GeneMarkS-2+ CDS 2312230 2313252 . + 0 ID=cds-WP_078275183.1;Parent=gene-LP088_RS11785;Dbxref=Genbank:WP_078275183.1;Name=WP_078275183.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS11785;product=hypothetical protein;protein_id=WP_078275183.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2313332 2313790 . + . ID=gene-LP088_RS11790;Name=LP088_RS11790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11790;old_locus_tag=LP088_11675 NZ_CP087814.1 Protein Homology CDS 2313332 2313790 . + 0 ID=cds-WP_078275184.1;Parent=gene-LP088_RS11790;Dbxref=Genbank:WP_078275184.1;Name=WP_078275184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003662177.1;locus_tag=LP088_RS11790;product=acyl-CoA thioesterase;protein_id=WP_078275184.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2313787 2314023 . + . ID=gene-LP088_RS11795;Name=tusA;gbkey=Gene;gene=tusA;gene_biotype=protein_coding;locus_tag=LP088_RS11795;old_locus_tag=LP088_11680 NZ_CP087814.1 Protein Homology CDS 2313787 2314023 . + 0 ID=cds-WP_078275185.1;Parent=gene-LP088_RS11795;Dbxref=Genbank:WP_078275185.1;Name=WP_078275185.1;Ontology_term=GO:0002143,GO:0097163;gbkey=CDS;gene=tusA;go_function=sulfur carrier activity|0097163||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512434.1;locus_tag=LP088_RS11795;product=sulfurtransferase TusA;protein_id=WP_078275185.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2314026 2314592 . + . ID=gene-LP088_RS11800;Name=LP088_RS11800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11800;old_locus_tag=LP088_11685 NZ_CP087814.1 GeneMarkS-2+ CDS 2314026 2314592 . + 0 ID=cds-WP_078275186.1;Parent=gene-LP088_RS11800;Dbxref=Genbank:WP_078275186.1;Name=WP_078275186.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS11800;product=hypothetical protein;protein_id=WP_078275186.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2314589 2315119 . - . ID=gene-LP088_RS11805;Name=LP088_RS11805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11805;old_locus_tag=LP088_11690 NZ_CP087814.1 Protein Homology CDS 2314589 2315119 . - 0 ID=cds-WP_078275187.1;Parent=gene-LP088_RS11805;Dbxref=Genbank:WP_078275187.1;Name=WP_078275187.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022243.2;locus_tag=LP088_RS11805;product=hypothetical protein;protein_id=WP_078275187.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2315242 2315634 . - . ID=gene-LP088_RS11810;Name=LP088_RS11810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11810;old_locus_tag=LP088_11695 NZ_CP087814.1 Protein Homology CDS 2315242 2315634 . - 0 ID=cds-WP_078275188.1;Parent=gene-LP088_RS11810;Dbxref=Genbank:WP_078275188.1;Name=WP_078275188.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013970.2;locus_tag=LP088_RS11810;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_078275188.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2315631 2315894 . - . ID=gene-LP088_RS11815;Name=vapB;gbkey=Gene;gene=vapB;gene_biotype=protein_coding;locus_tag=LP088_RS11815;old_locus_tag=LP088_11700 NZ_CP087814.1 Protein Homology CDS 2315631 2315894 . - 0 ID=cds-WP_264675982.1;Parent=gene-LP088_RS11815;Dbxref=Genbank:WP_264675982.1;Name=WP_264675982.1;gbkey=CDS;gene=vapB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005155998.1;locus_tag=LP088_RS11815;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WP_264675982.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2315974 2317233 . - . ID=gene-LP088_RS11820;Name=LP088_RS11820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11820;old_locus_tag=LP088_11705 NZ_CP087814.1 Protein Homology CDS 2315974 2317233 . - 0 ID=cds-WP_264675983.1;Parent=gene-LP088_RS11820;Dbxref=Genbank:WP_264675983.1;Name=WP_264675983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009767144.1;locus_tag=LP088_RS11820;product=replication-associated recombination protein A;protein_id=WP_264675983.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2317591 2317968 . - . ID=gene-LP088_RS11825;Name=LP088_RS11825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11825;old_locus_tag=LP088_11710 NZ_CP087814.1 Protein Homology CDS 2317591 2317968 . - 0 ID=cds-WP_264675984.1;Parent=gene-LP088_RS11825;Dbxref=Genbank:WP_264675984.1;Name=WP_264675984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003668358.1;locus_tag=LP088_RS11825;product=hypothetical protein;protein_id=WP_264675984.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2318053 2318508 . + . ID=gene-LP088_RS11830;Name=LP088_RS11830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11830;old_locus_tag=LP088_11715 NZ_CP087814.1 Protein Homology CDS 2318053 2318508 . + 0 ID=cds-WP_264675985.1;Parent=gene-LP088_RS11830;Dbxref=Genbank:WP_264675985.1;Name=WP_264675985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512479.1;locus_tag=LP088_RS11830;product=type IV secretion protein Rhs;protein_id=WP_264675985.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2318573 2318845 . - . ID=gene-LP088_RS11835;Name=LP088_RS11835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11835;old_locus_tag=LP088_11720 NZ_CP087814.1 Protein Homology CDS 2318573 2318845 . - 0 ID=cds-WP_228157760.1;Parent=gene-LP088_RS11835;Dbxref=Genbank:WP_228157760.1;Name=WP_228157760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001129137.1;locus_tag=LP088_RS11835;product=type II toxin-antitoxin system YafQ family toxin;protein_id=WP_228157760.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2318838 2319131 . - . ID=gene-LP088_RS11840;Name=LP088_RS11840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11840;old_locus_tag=LP088_11725 NZ_CP087814.1 Protein Homology CDS 2318838 2319131 . - 0 ID=cds-WP_029103533.1;Parent=gene-LP088_RS11840;Dbxref=Genbank:WP_029103533.1;Name=WP_029103533.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR02384.1;locus_tag=LP088_RS11840;product=type II toxin-antitoxin system RelB/DinJ family antitoxin;protein_id=WP_029103533.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2319275 2320609 . - . ID=gene-LP088_RS11845;Name=LP088_RS11845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11845;old_locus_tag=LP088_11730 NZ_CP087814.1 Protein Homology CDS 2319275 2320609 . - 0 ID=cds-WP_112741795.1;Parent=gene-LP088_RS11845;Dbxref=Genbank:WP_112741795.1;Name=WP_112741795.1;Ontology_term=GO:0006203,GO:0008832;gbkey=CDS;go_function=dGTPase activity|0008832||IEA;go_process=dGTP catabolic process|0006203||IEA;inference=COORDINATES: protein motif:HMM:NF002205.0;locus_tag=LP088_RS11845;product=deoxyguanosinetriphosphate triphosphohydrolase;protein_id=WP_112741795.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2320818 2321534 . - . ID=gene-LP088_RS11850;Name=LP088_RS11850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11850;old_locus_tag=LP088_11735 NZ_CP087814.1 GeneMarkS-2+ CDS 2320818 2321534 . - 0 ID=cds-WP_078275193.1;Parent=gene-LP088_RS11850;Dbxref=Genbank:WP_078275193.1;Name=WP_078275193.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS11850;product=hypothetical protein;protein_id=WP_078275193.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2321555 2322166 . - . ID=gene-LP088_RS11855;Name=LP088_RS11855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11855;old_locus_tag=LP088_11740 NZ_CP087814.1 Protein Homology CDS 2321555 2322166 . - 0 ID=cds-WP_112741794.1;Parent=gene-LP088_RS11855;Dbxref=Genbank:WP_112741794.1;Name=WP_112741794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010197711.1;locus_tag=LP088_RS11855;product=methyltransferase;protein_id=WP_112741794.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2322286 2323620 . + . ID=gene-LP088_RS11860;Name=LP088_RS11860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11860;old_locus_tag=LP088_11745 NZ_CP087814.1 Protein Homology CDS 2322286 2323620 . + 0 ID=cds-WP_078275195.1;Parent=gene-LP088_RS11860;Dbxref=Genbank:WP_078275195.1;Name=WP_078275195.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444524.1;locus_tag=LP088_RS11860;product=valine--pyruvate transaminase;protein_id=WP_078275195.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2323652 2325637 . + . ID=gene-LP088_RS11865;Name=LP088_RS11865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11865;old_locus_tag=LP088_11750 NZ_CP087814.1 Protein Homology CDS 2323652 2325637 . + 0 ID=cds-WP_078275196.1;Parent=gene-LP088_RS11865;Dbxref=Genbank:WP_078275196.1;Name=WP_078275196.1;Ontology_term=GO:0006306,GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;go_process=DNA methylation|0006306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519680.1;locus_tag=LP088_RS11865;product=N-6 DNA methylase;protein_id=WP_078275196.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2325670 2327094 . + . ID=gene-LP088_RS11870;Name=LP088_RS11870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11870;old_locus_tag=LP088_11755 NZ_CP087814.1 Protein Homology CDS 2325670 2327094 . + 0 ID=cds-WP_264677334.1;Parent=gene-LP088_RS11870;Dbxref=Genbank:WP_264677334.1;Name=WP_264677334.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: protein motif:HMM:NF013579.2;locus_tag=LP088_RS11870;product=restriction endonuclease subunit S;protein_id=WP_264677334.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2327175 2327837 . + . ID=gene-LP088_RS11875;Name=LP088_RS11875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11875;old_locus_tag=LP088_11760 NZ_CP087814.1 Protein Homology CDS 2327175 2327837 . + 0 ID=cds-WP_208624063.1;Parent=gene-LP088_RS11875;Dbxref=Genbank:WP_208624063.1;Name=WP_208624063.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: protein motif:HMM:NF013579.2;locus_tag=LP088_RS11875;product=restriction endonuclease subunit S;protein_id=WP_208624063.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2327827 2328780 . - . ID=gene-LP088_RS11880;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=LP088_RS11880;old_locus_tag=LP088_11765 NZ_CP087814.1 Protein Homology CDS 2327827 2328780 . - 0 ID=cds-WP_078275198.1;Parent=gene-LP088_RS11880;Dbxref=Genbank:WP_078275198.1;Name=WP_078275198.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512432.1;locus_tag=LP088_RS11880;product=site-specific tyrosine recombinase XerD;protein_id=WP_078275198.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2329006 2330097 . + . ID=gene-LP088_RS11885;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=LP088_RS11885;old_locus_tag=LP088_11770 NZ_CP087814.1 Protein Homology CDS 2329006 2330097 . + 0 ID=cds-WP_264675986.1;Parent=gene-LP088_RS11885;Dbxref=Genbank:WP_264675986.1;Name=WP_264675986.1;Ontology_term=GO:0008686;gbkey=CDS;gene=ribB;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003672275.1;locus_tag=LP088_RS11885;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=WP_264675986.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2330384 2330674 . - . ID=gene-LP088_RS11890;Name=LP088_RS11890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11890;old_locus_tag=LP088_11775 NZ_CP087814.1 GeneMarkS-2+ CDS 2330384 2330674 . - 0 ID=cds-WP_264682804.1;Parent=gene-LP088_RS11890;Dbxref=Genbank:WP_264682804.1;Name=WP_264682804.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS11890;product=hypothetical protein;protein_id=WP_264682804.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2330820 2331269 . + . ID=gene-LP088_RS11895;Name=LP088_RS11895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11895;old_locus_tag=LP088_11780 NZ_CP087814.1 Protein Homology CDS 2330820 2331269 . + 0 ID=cds-WP_078275057.1;Parent=gene-LP088_RS11895;Dbxref=Genbank:WP_078275057.1;Name=WP_078275057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003660405.1;locus_tag=LP088_RS11895;product=NfeD family protein;protein_id=WP_078275057.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2331391 2332239 . + . ID=gene-LP088_RS11900;Name=LP088_RS11900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11900;old_locus_tag=LP088_11785 NZ_CP087814.1 Protein Homology CDS 2331391 2332239 . + 0 ID=cds-WP_078275058.1;Parent=gene-LP088_RS11900;Dbxref=Genbank:WP_078275058.1;Name=WP_078275058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514749.1;locus_tag=LP088_RS11900;product=SPFH/Band 7/PHB domain protein;protein_id=WP_078275058.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2332242 2332451 . - . ID=gene-LP088_RS11905;Name=LP088_RS11905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11905;old_locus_tag=LP088_11790 NZ_CP087814.1 GeneMarkS-2+ CDS 2332242 2332451 . - 0 ID=cds-WP_078275059.1;Parent=gene-LP088_RS11905;Dbxref=Genbank:WP_078275059.1;Name=WP_078275059.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS11905;product=hypothetical protein;protein_id=WP_078275059.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2332438 2332638 . - . ID=gene-LP088_RS11910;Name=iscX;gbkey=Gene;gene=iscX;gene_biotype=protein_coding;locus_tag=LP088_RS11910;old_locus_tag=LP088_11795 NZ_CP087814.1 Protein Homology CDS 2332438 2332638 . - 0 ID=cds-WP_029103819.1;Parent=gene-LP088_RS11910;Dbxref=Genbank:WP_029103819.1;Name=WP_029103819.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=iscX;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009501964.1;locus_tag=LP088_RS11910;product=Fe-S cluster assembly protein IscX;protein_id=WP_029103819.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2332734 2333477 . + . ID=gene-LP088_RS11915;Name=LP088_RS11915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11915;old_locus_tag=LP088_11800 NZ_CP087814.1 Protein Homology CDS 2332734 2333477 . + 0 ID=cds-WP_228144857.1;Parent=gene-LP088_RS11915;Dbxref=Genbank:WP_228144857.1;Name=WP_228144857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003673306.1;locus_tag=LP088_RS11915;product=epoxyqueuosine reductase QueH;protein_id=WP_228144857.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2333778 2335316 . + . ID=gene-LP088_RS11920;Name=LP088_RS11920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11920;old_locus_tag=LP088_11805 NZ_CP087814.1 Protein Homology CDS 2333778 2335316 . + 0 ID=cds-WP_112741788.1;Parent=gene-LP088_RS11920;Dbxref=Genbank:WP_112741788.1;Name=WP_112741788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009501645.1;locus_tag=LP088_RS11920;product=catalase;protein_id=WP_112741788.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2335661 2336281 . + . ID=gene-LP088_RS11925;Name=LP088_RS11925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11925;old_locus_tag=LP088_11810 NZ_CP087814.1 GeneMarkS-2+ CDS 2335661 2336281 . + 0 ID=cds-WP_264690330.1;Parent=gene-LP088_RS11925;Dbxref=Genbank:WP_264690330.1;Name=WP_264690330.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS11925;product=hypothetical protein;protein_id=WP_264690330.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2336510 2337238 . + . ID=gene-LP088_RS11930;Name=LP088_RS11930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11930;old_locus_tag=LP088_11815 NZ_CP087814.1 Protein Homology CDS 2336510 2337238 . + 0 ID=cds-WP_264690429.1;Parent=gene-LP088_RS11930;Dbxref=Genbank:WP_264690429.1;Name=WP_264690429.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012307.2;locus_tag=LP088_RS11930;product=reverse transcriptase domain-containing protein;protein_id=WP_264690429.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2337773 2338843 . - . ID=gene-LP088_RS11935;Name=LP088_RS11935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11935;old_locus_tag=LP088_11820 NZ_CP087814.1 Protein Homology CDS 2337773 2338843 . - 0 ID=cds-WP_078275062.1;Parent=gene-LP088_RS11935;Dbxref=Genbank:WP_078275062.1;Name=WP_078275062.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF004127.0;locus_tag=LP088_RS11935;product=enoyl-CoA hydratase/isomerase family protein;protein_id=WP_078275062.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2338986 2339768 . + . ID=gene-LP088_RS11940;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=LP088_RS11940;old_locus_tag=LP088_11825 NZ_CP087814.1 Protein Homology CDS 2338986 2339768 . + 0 ID=cds-WP_112741786.1;Parent=gene-LP088_RS11940;Dbxref=Genbank:WP_112741786.1;Name=WP_112741786.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279844.1;locus_tag=LP088_RS11940;product=peroxide stress protein YaaA;protein_id=WP_112741786.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2339926 2341017 . + . ID=gene-LP088_RS11945;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=LP088_RS11945;old_locus_tag=LP088_11830 NZ_CP087814.1 Protein Homology CDS 2339926 2341017 . + 0 ID=cds-WP_228157759.1;Parent=gene-LP088_RS11945;Dbxref=Genbank:WP_228157759.1;Name=WP_228157759.1;Ontology_term=GO:0006281,GO:0006310,GO:0009432,GO:0003677,GO:0008094,GO:0005737;gbkey=CDS;gene=recA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657786.1;locus_tag=LP088_RS11945;product=recombinase RecA;protein_id=WP_228157759.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2341022 2341990 . + . ID=gene-LP088_RS11950;Name=LP088_RS11950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11950;old_locus_tag=LP088_11835 NZ_CP087814.1 Protein Homology CDS 2341022 2341990 . + 0 ID=cds-WP_158079708.1;Parent=gene-LP088_RS11950;Dbxref=Genbank:WP_158079708.1;Name=WP_158079708.1;Ontology_term=GO:0006282;gbkey=CDS;go_process=regulation of DNA repair|0006282||IEA;inference=COORDINATES: protein motif:HMM:NF014668.2;locus_tag=LP088_RS11950;product=RecX family transcriptional regulator;protein_id=WP_158079708.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2342012 2343346 . - . ID=gene-LP088_RS11955;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=LP088_RS11955;old_locus_tag=LP088_11840 NZ_CP087814.1 Protein Homology CDS 2342012 2343346 . - 0 ID=cds-WP_078275065.1;Parent=gene-LP088_RS11955;Dbxref=Genbank:WP_078275065.1;Name=WP_078275065.1;Ontology_term=GO:0006779,GO:0008883,GO:0005737;gbkey=CDS;gene=hemA;go_component=cytoplasm|0005737||IEA;go_function=glutamyl-tRNA reductase activity|0008883||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011959600.1;locus_tag=LP088_RS11955;product=glutamyl-tRNA reductase;protein_id=WP_078275065.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2343727 2344815 . - . ID=gene-LP088_RS11960;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=LP088_RS11960;old_locus_tag=LP088_11845 NZ_CP087814.1 Protein Homology CDS 2343727 2344815 . - 0 ID=cds-WP_112741785.1;Parent=gene-LP088_RS11960;Dbxref=Genbank:WP_112741785.1;Name=WP_112741785.1;Ontology_term=GO:0015920,GO:0015221,GO:0005886;gbkey=CDS;gene=lptG;go_component=plasma membrane|0005886||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003668347.1;locus_tag=LP088_RS11960;product=LPS export ABC transporter permease LptG;protein_id=WP_112741785.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2344812 2346098 . - . ID=gene-LP088_RS11965;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=LP088_RS11965;old_locus_tag=LP088_11850 NZ_CP087814.1 Protein Homology CDS 2344812 2346098 . - 0 ID=cds-WP_112741784.1;Parent=gene-LP088_RS11965;Dbxref=Genbank:WP_112741784.1;Name=WP_112741784.1;Ontology_term=GO:0015920,GO:0015221,GO:0005886;gbkey=CDS;gene=lptF;go_component=plasma membrane|0005886||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013108251.1;locus_tag=LP088_RS11965;product=LPS export ABC transporter permease LptF;protein_id=WP_112741784.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 2346295 2346925 . - . ID=gene-LP088_RS11970;Name=LP088_RS11970;end_range=2346925,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS11970;old_locus_tag=LP088_11855;partial=true;pseudo=true NZ_CP087814.1 Protein Homology CDS 2346295 2346925 . - 0 ID=cds-LP088_RS11970;Parent=gene-LP088_RS11970;Note=programmed frameshift%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=2346925,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611661.1;locus_tag=LP088_RS11970;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_CP087814.1 RefSeq gene 2347072 2347833 . + . ID=gene-LP088_RS11975;Name=LP088_RS11975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11975;old_locus_tag=LP088_11860 NZ_CP087814.1 Protein Homology CDS 2347072 2347833 . + 0 ID=cds-WP_208624034.1-5;Parent=gene-LP088_RS11975;Dbxref=Genbank:WP_208624034.1;Name=WP_208624034.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF012870.2;locus_tag=LP088_RS11975;product=DDE-type integrase/transposase/recombinase;protein_id=WP_208624034.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2347808 2348671 . - . ID=gene-LP088_RS11980;Name=LP088_RS11980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11980;old_locus_tag=LP088_11865 NZ_CP087814.1 GeneMarkS-2+ CDS 2347808 2348671 . - 0 ID=cds-WP_208624062.1;Parent=gene-LP088_RS11980;Dbxref=Genbank:WP_208624062.1;Name=WP_208624062.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS11980;product=PAAR domain-containing protein;protein_id=WP_208624062.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2348889 2350976 . - . ID=gene-LP088_RS11985;Name=LP088_RS11985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11985;old_locus_tag=LP088_11870 NZ_CP087814.1 Protein Homology CDS 2348889 2350976 . - 0 ID=cds-WP_112741783.1;Parent=gene-LP088_RS11985;Dbxref=Genbank:WP_112741783.1;Name=WP_112741783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011961452.1;locus_tag=LP088_RS11985;product=M3 family metallopeptidase;protein_id=WP_112741783.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2351135 2351896 . + . ID=gene-LP088_RS11990;Name=LP088_RS11990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS11990;old_locus_tag=LP088_11875 NZ_CP087814.1 Protein Homology CDS 2351135 2351896 . + 0 ID=cds-WP_264675989.1;Parent=gene-LP088_RS11990;Dbxref=Genbank:WP_264675989.1;Name=WP_264675989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003661038.1;locus_tag=LP088_RS11990;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_264675989.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2352146 2353657 . + . ID=gene-LP088_RS11995;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=LP088_RS11995;old_locus_tag=LP088_11880 NZ_CP087814.1 Protein Homology CDS 2352146 2353657 . + 0 ID=cds-WP_078275102.1;Parent=gene-LP088_RS11995;Dbxref=Genbank:WP_078275102.1;Name=WP_078275102.1;Ontology_term=GO:0006424,GO:0004818,GO:0009332;gbkey=CDS;gene=gltX;go_component=glutamate-tRNA ligase complex|0009332||IEA;go_function=glutamate-tRNA ligase activity|0004818||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010200542.1;locus_tag=LP088_RS11995;product=glutamate--tRNA ligase;protein_id=WP_078275102.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2353769 2353844 . + . ID=gene-LP088_RS12000;Name=LP088_RS12000;gbkey=Gene;gene_biotype=tRNA;locus_tag=LP088_RS12000;old_locus_tag=LP088_11885 NZ_CP087814.1 tRNAscan-SE tRNA 2353769 2353844 . + . ID=rna-LP088_RS12000;Parent=gene-LP088_RS12000;anticodon=(pos:2353802..2353804);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS12000;product=tRNA-Ala NZ_CP087814.1 tRNAscan-SE exon 2353769 2353844 . + . ID=exon-LP088_RS12000-1;Parent=rna-LP088_RS12000;anticodon=(pos:2353802..2353804);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS12000;product=tRNA-Ala NZ_CP087814.1 RefSeq gene 2353921 2353996 . + . ID=gene-LP088_RS12005;Name=LP088_RS12005;gbkey=Gene;gene_biotype=tRNA;locus_tag=LP088_RS12005;old_locus_tag=LP088_11890 NZ_CP087814.1 tRNAscan-SE tRNA 2353921 2353996 . + . ID=rna-LP088_RS12005;Parent=gene-LP088_RS12005;anticodon=(pos:2353955..2353957);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS12005;product=tRNA-Glu NZ_CP087814.1 tRNAscan-SE exon 2353921 2353996 . + . ID=exon-LP088_RS12005-1;Parent=rna-LP088_RS12005;anticodon=(pos:2353955..2353957);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS12005;product=tRNA-Glu NZ_CP087814.1 RefSeq gene 2354059 2354757 . + . ID=gene-LP088_RS12010;Name=LP088_RS12010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12010;old_locus_tag=LP088_11895 NZ_CP087814.1 Protein Homology CDS 2354059 2354757 . + 0 ID=cds-WP_079325037.1;Parent=gene-LP088_RS12010;Dbxref=Genbank:WP_079325037.1;Name=WP_079325037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003661532.1;locus_tag=LP088_RS12010;product=metal-dependent hydrolase;protein_id=WP_079325037.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2354872 2355819 . + . ID=gene-LP088_RS12015;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=LP088_RS12015;old_locus_tag=LP088_11900 NZ_CP087814.1 Protein Homology CDS 2354872 2355819 . + 0 ID=cds-WP_112742780.1;Parent=gene-LP088_RS12015;Dbxref=Genbank:WP_112742780.1;Name=WP_112742780.1;Ontology_term=GO:0009245,GO:0008759;gbkey=CDS;gene=lpxC;go_function=UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity|0008759||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444187.1;locus_tag=LP088_RS12015;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=WP_112742780.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2356065 2356631 . - . ID=gene-LP088_RS12020;Name=LP088_RS12020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12020;old_locus_tag=LP088_11905 NZ_CP087814.1 GeneMarkS-2+ CDS 2356065 2356631 . - 0 ID=cds-WP_143821735.1;Parent=gene-LP088_RS12020;Dbxref=Genbank:WP_143821735.1;Name=WP_143821735.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12020;product=hypothetical protein;protein_id=WP_143821735.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2356805 2357509 . + . ID=gene-LP088_RS12025;Name=LP088_RS12025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12025;old_locus_tag=LP088_11910 NZ_CP087814.1 Protein Homology CDS 2356805 2357509 . + 0 ID=cds-WP_029103867.1;Parent=gene-LP088_RS12025;Dbxref=Genbank:WP_029103867.1;Name=WP_029103867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003660818.1;locus_tag=LP088_RS12025;product=CHAP domain-containing protein;protein_id=WP_029103867.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2357621 2358586 . - . ID=gene-LP088_RS12030;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=LP088_RS12030;old_locus_tag=LP088_11915 NZ_CP087814.1 Protein Homology CDS 2357621 2358586 . - 0 ID=cds-WP_078275110.1;Parent=gene-LP088_RS12030;Dbxref=Genbank:WP_078275110.1;Name=WP_078275110.1;Ontology_term=GO:0006747,GO:0009398,GO:0003919,GO:0005737;gbkey=CDS;gene=ribF;go_component=cytoplasm|0005737||IEA;go_function=FMN adenylyltransferase activity|0003919||IEA;go_process=FAD biosynthetic process|0006747||IEA,FMN biosynthetic process|0009398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003658888.1;locus_tag=LP088_RS12030;product=riboflavin biosynthesis protein RibF;protein_id=WP_078275110.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2358703 2359080 . + . ID=gene-LP088_RS12035;Name=LP088_RS12035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12035;old_locus_tag=LP088_11920 NZ_CP087814.1 Protein Homology CDS 2358703 2359080 . + 0 ID=cds-WP_158079711.1;Parent=gene-LP088_RS12035;Dbxref=Genbank:WP_158079711.1;Name=WP_158079711.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037970.1;locus_tag=LP088_RS12035;product=VanZ family protein;protein_id=WP_158079711.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2359211 2359690 . - . ID=gene-LP088_RS12040;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=LP088_RS12040;old_locus_tag=LP088_11925 NZ_CP087814.1 Protein Homology CDS 2359211 2359690 . - 0 ID=cds-WP_078275106.1;Parent=gene-LP088_RS12040;Dbxref=Genbank:WP_078275106.1;Name=WP_078275106.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016141872.1;locus_tag=LP088_RS12040;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_078275106.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2359894 2360280 . - . ID=gene-LP088_RS12045;Name=LP088_RS12045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12045;old_locus_tag=LP088_11930 NZ_CP087814.1 Protein Homology CDS 2359894 2360280 . - 0 ID=cds-WP_112741781.1;Parent=gene-LP088_RS12045;Dbxref=Genbank:WP_112741781.1;Name=WP_112741781.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025000.2;locus_tag=LP088_RS12045;product=transposase family protein;protein_id=WP_112741781.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2360553 2361503 . + . ID=gene-LP088_RS12050;Name=LP088_RS12050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12050;old_locus_tag=LP088_11935 NZ_CP087814.1 Protein Homology CDS 2360553 2361503 . + 0 ID=cds-WP_228157757.1;Parent=gene-LP088_RS12050;Dbxref=Genbank:WP_228157757.1;Name=WP_228157757.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020134.2;locus_tag=LP088_RS12050;product=hypothetical protein;protein_id=WP_228157757.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2361547 2362545 . + . ID=gene-LP088_RS12055;Name=LP088_RS12055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12055;old_locus_tag=LP088_11940 NZ_CP087814.1 Protein Homology CDS 2361547 2362545 . + 0 ID=cds-WP_078275108.1;Parent=gene-LP088_RS12055;Dbxref=Genbank:WP_078275108.1;Name=WP_078275108.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027681.2;locus_tag=LP088_RS12055;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_078275108.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 2362724 2363354 . - . ID=gene-LP088_RS12060;Name=LP088_RS12060;end_range=2363354,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS12060;old_locus_tag=LP088_11945;partial=true;pseudo=true NZ_CP087814.1 Protein Homology CDS 2362724 2363354 . - 0 ID=cds-LP088_RS12060;Parent=gene-LP088_RS12060;Note=programmed frameshift%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=2363354,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611661.1;locus_tag=LP088_RS12060;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_CP087814.1 RefSeq gene 2363501 2364262 . + . ID=gene-LP088_RS12065;Name=LP088_RS12065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12065;old_locus_tag=LP088_11950 NZ_CP087814.1 Protein Homology CDS 2363501 2364262 . + 0 ID=cds-WP_208624034.1-6;Parent=gene-LP088_RS12065;Dbxref=Genbank:WP_208624034.1;Name=WP_208624034.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF012870.2;locus_tag=LP088_RS12065;product=DDE-type integrase/transposase/recombinase;protein_id=WP_208624034.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2364558 2364806 . + . ID=gene-LP088_RS12070;Name=LP088_RS12070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12070;old_locus_tag=LP088_11955 NZ_CP087814.1 GeneMarkS-2+ CDS 2364558 2364806 . + 0 ID=cds-WP_112741779.1;Parent=gene-LP088_RS12070;Dbxref=Genbank:WP_112741779.1;Name=WP_112741779.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12070;product=hypothetical protein;protein_id=WP_112741779.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2365249 2365491 . + . ID=gene-LP088_RS12075;Name=LP088_RS12075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12075;old_locus_tag=LP088_11960 NZ_CP087814.1 Protein Homology CDS 2365249 2365491 . + 0 ID=cds-WP_112741778.1;Parent=gene-LP088_RS12075;Dbxref=Genbank:WP_112741778.1;Name=WP_112741778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019673589.1;locus_tag=LP088_RS12075;product=YheV family putative metal-binding protein;protein_id=WP_112741778.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2365718 2366785 . + . ID=gene-LP088_RS12080;Name=LP088_RS12080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12080;old_locus_tag=LP088_11965 NZ_CP087814.1 GeneMarkS-2+ CDS 2365718 2366785 . + 0 ID=cds-WP_264675990.1;Parent=gene-LP088_RS12080;Dbxref=Genbank:WP_264675990.1;Name=WP_264675990.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12080;product=hypothetical protein;protein_id=WP_264675990.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2366847 2367299 . - . ID=gene-LP088_RS12085;Name=LP088_RS12085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12085;old_locus_tag=LP088_11970 NZ_CP087814.1 GeneMarkS-2+ CDS 2366847 2367299 . - 0 ID=cds-WP_078274610.1;Parent=gene-LP088_RS12085;Dbxref=Genbank:WP_078274610.1;Name=WP_078274610.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12085;product=hypothetical protein;protein_id=WP_078274610.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2367299 2368015 . - . ID=gene-LP088_RS12090;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=LP088_RS12090;old_locus_tag=LP088_11975 NZ_CP087814.1 Protein Homology CDS 2367299 2368015 . - 0 ID=cds-WP_078274611.1;Parent=gene-LP088_RS12090;Dbxref=Genbank:WP_078274611.1;Name=WP_078274611.1;Ontology_term=GO:0008033,GO:0004549;gbkey=CDS;gene=rph;go_function=tRNA-specific ribonuclease activity|0004549||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009584291.1;locus_tag=LP088_RS12090;product=ribonuclease PH;protein_id=WP_078274611.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2368150 2369853 . - . ID=gene-LP088_RS12095;Name=LP088_RS12095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12095;old_locus_tag=LP088_11980 NZ_CP087814.1 Protein Homology CDS 2368150 2369853 . - 0 ID=cds-WP_264675991.1;Parent=gene-LP088_RS12095;Dbxref=Genbank:WP_264675991.1;Name=WP_264675991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003673325.1;locus_tag=LP088_RS12095;product=AMP-binding protein;protein_id=WP_264675991.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2370067 2370219 . + . ID=gene-LP088_RS12100;Name=LP088_RS12100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12100;old_locus_tag=LP088_11985 NZ_CP087814.1 GeneMarkS-2+ CDS 2370067 2370219 . + 0 ID=cds-WP_158079673.1;Parent=gene-LP088_RS12100;Dbxref=Genbank:WP_158079673.1;Name=WP_158079673.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12100;product=hypothetical protein;protein_id=WP_158079673.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2370376 2371251 . - . ID=gene-LP088_RS12105;Name=LP088_RS12105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12105;old_locus_tag=LP088_11990 NZ_CP087814.1 Protein Homology CDS 2370376 2371251 . - 0 ID=cds-WP_228157756.1;Parent=gene-LP088_RS12105;Dbxref=Genbank:WP_228157756.1;Name=WP_228157756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009767052.1;locus_tag=LP088_RS12105;product=hypothetical protein;protein_id=WP_228157756.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2371340 2371993 . - . ID=gene-LP088_RS12110;Name=LP088_RS12110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12110;old_locus_tag=LP088_11995 NZ_CP087814.1 Protein Homology CDS 2371340 2371993 . - 0 ID=cds-WP_078274614.1;Parent=gene-LP088_RS12110;Dbxref=Genbank:WP_078274614.1;Name=WP_078274614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520029.1;locus_tag=LP088_RS12110;product=phosphoesterase;protein_id=WP_078274614.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2372072 2372536 . - . ID=gene-LP088_RS12115;Name=LP088_RS12115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12115;old_locus_tag=LP088_12000 NZ_CP087814.1 GeneMarkS-2+ CDS 2372072 2372536 . - 0 ID=cds-WP_078274615.1;Parent=gene-LP088_RS12115;Dbxref=Genbank:WP_078274615.1;Name=WP_078274615.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12115;product=hypothetical protein;protein_id=WP_078274615.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2372693 2372887 . - . ID=gene-LP088_RS12120;Name=LP088_RS12120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12120;old_locus_tag=LP088_12005 NZ_CP087814.1 GeneMarkS-2+ CDS 2372693 2372887 . - 0 ID=cds-WP_078274616.1;Parent=gene-LP088_RS12120;Dbxref=Genbank:WP_078274616.1;Name=WP_078274616.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12120;product=hypothetical protein;protein_id=WP_078274616.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2372884 2374398 . - . ID=gene-LP088_RS12125;Name=LP088_RS12125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12125;old_locus_tag=LP088_12010 NZ_CP087814.1 Protein Homology CDS 2372884 2374398 . - 0 ID=cds-WP_078274617.1;Parent=gene-LP088_RS12125;Dbxref=Genbank:WP_078274617.1;Name=WP_078274617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520030.1;locus_tag=LP088_RS12125;product=2'-5' RNA ligase;protein_id=WP_078274617.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2374933 2375139 . + . ID=gene-LP088_RS12130;Name=LP088_RS12130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12130;old_locus_tag=LP088_12015 NZ_CP087814.1 GeneMarkS-2+ CDS 2374933 2375139 . + 0 ID=cds-WP_112741774.1;Parent=gene-LP088_RS12130;Dbxref=Genbank:WP_112741774.1;Name=WP_112741774.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12130;product=hypothetical protein;protein_id=WP_112741774.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 2375174 2375804 . - . ID=gene-LP088_RS12135;Name=LP088_RS12135;end_range=2375804,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS12135;old_locus_tag=LP088_12020;partial=true;pseudo=true NZ_CP087814.1 Protein Homology CDS 2375174 2375804 . - 0 ID=cds-LP088_RS12135;Parent=gene-LP088_RS12135;Note=programmed frameshift%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=2375804,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611661.1;locus_tag=LP088_RS12135;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_CP087814.1 RefSeq gene 2375927 2376601 . - . ID=gene-LP088_RS12140;Name=LP088_RS12140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12140;old_locus_tag=LP088_12025 NZ_CP087814.1 GeneMarkS-2+ CDS 2375927 2376601 . - 0 ID=cds-WP_264689864.1;Parent=gene-LP088_RS12140;Dbxref=Genbank:WP_264689864.1;Name=WP_264689864.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12140;product=hypothetical protein;protein_id=WP_264689864.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2376601 2376837 . - . ID=gene-LP088_RS12145;Name=LP088_RS12145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12145;old_locus_tag=LP088_12030 NZ_CP087814.1 GeneMarkS-2+ CDS 2376601 2376837 . - 0 ID=cds-WP_078274437.1;Parent=gene-LP088_RS12145;Dbxref=Genbank:WP_078274437.1;Name=WP_078274437.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12145;product=carboxypeptidase-like regulatory domain-containing protein;protein_id=WP_078274437.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2377011 2377841 . - . ID=gene-LP088_RS12150;Name=LP088_RS12150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12150;old_locus_tag=LP088_12035 NZ_CP087814.1 GeneMarkS-2+ CDS 2377011 2377841 . - 0 ID=cds-WP_078274438.1;Parent=gene-LP088_RS12150;Dbxref=Genbank:WP_078274438.1;Name=WP_078274438.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12150;product=hypothetical protein;protein_id=WP_078274438.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2377884 2378105 . - . ID=gene-LP088_RS12155;Name=LP088_RS12155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12155;old_locus_tag=LP088_12040 NZ_CP087814.1 GeneMarkS-2+ CDS 2377884 2378105 . - 0 ID=cds-WP_078274439.1;Parent=gene-LP088_RS12155;Dbxref=Genbank:WP_078274439.1;Name=WP_078274439.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12155;product=hypothetical protein;protein_id=WP_078274439.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2378148 2378531 . - . ID=gene-LP088_RS12160;Name=LP088_RS12160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12160;old_locus_tag=LP088_12045 NZ_CP087814.1 GeneMarkS-2+ CDS 2378148 2378531 . - 0 ID=cds-WP_143821692.1;Parent=gene-LP088_RS12160;Dbxref=Genbank:WP_143821692.1;Name=WP_143821692.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12160;product=hypothetical protein;protein_id=WP_143821692.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2378464 2379036 . - . ID=gene-LP088_RS12165;Name=LP088_RS12165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12165;old_locus_tag=LP088_12050 NZ_CP087814.1 GeneMarkS-2+ CDS 2378464 2379036 . - 0 ID=cds-WP_078274441.1;Parent=gene-LP088_RS12165;Dbxref=Genbank:WP_078274441.1;Name=WP_078274441.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12165;product=hypothetical protein;protein_id=WP_078274441.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2379127 2379690 . - . ID=gene-LP088_RS12170;Name=LP088_RS12170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12170;old_locus_tag=LP088_12055 NZ_CP087814.1 GeneMarkS-2+ CDS 2379127 2379690 . - 0 ID=cds-WP_078274442.1;Parent=gene-LP088_RS12170;Dbxref=Genbank:WP_078274442.1;Name=WP_078274442.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12170;product=hypothetical protein;protein_id=WP_078274442.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2379793 2380410 . - . ID=gene-LP088_RS12175;Name=LP088_RS12175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12175;old_locus_tag=LP088_12060 NZ_CP087814.1 GeneMarkS-2+ CDS 2379793 2380410 . - 0 ID=cds-WP_078274443.1;Parent=gene-LP088_RS12175;Dbxref=Genbank:WP_078274443.1;Name=WP_078274443.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12175;product=hypothetical protein;protein_id=WP_078274443.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 2380657 2381218 . + . ID=gene-LP088_RS12180;Name=LP088_RS12180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS12180;old_locus_tag=LP088_12065;pseudo=true NZ_CP087814.1 Protein Homology CDS 2380657 2381218 . + 0 ID=cds-LP088_RS12180;Parent=gene-LP088_RS12180;Note=frameshifted;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011959554.1;locus_tag=LP088_RS12180;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_CP087814.1 RefSeq gene 2381338 2382828 . + . ID=gene-LP088_RS12185;Name=LP088_RS12185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12185;old_locus_tag=LP088_12070 NZ_CP087814.1 Protein Homology CDS 2381338 2382828 . + 0 ID=cds-WP_264675994.1;Parent=gene-LP088_RS12185;Dbxref=Genbank:WP_264675994.1;Name=WP_264675994.1;Ontology_term=GO:0019538,GO:0070006;gbkey=CDS;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009767313.1;locus_tag=LP088_RS12185;product=leucyl aminopeptidase;protein_id=WP_264675994.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2383211 2384425 . + . ID=gene-LP088_RS12190;Name=sstT;gbkey=Gene;gene=sstT;gene_biotype=protein_coding;locus_tag=LP088_RS12190;old_locus_tag=LP088_12075 NZ_CP087814.1 Protein Homology CDS 2383211 2384425 . + 0 ID=cds-WP_078274445.1;Parent=gene-LP088_RS12190;Dbxref=Genbank:WP_078274445.1;Name=WP_078274445.1;Ontology_term=GO:0015826,GO:0032329,GO:0015293,GO:0016020;gbkey=CDS;gene=sstT;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=threonine transport|0015826||IEA,serine transport|0032329||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519835.1;locus_tag=LP088_RS12190;product=serine/threonine transporter SstT;protein_id=WP_078274445.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2384453 2384875 . + . ID=gene-LP088_RS12195;Name=LP088_RS12195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12195;old_locus_tag=LP088_12080 NZ_CP087814.1 GeneMarkS-2+ CDS 2384453 2384875 . + 0 ID=cds-WP_078274446.1;Parent=gene-LP088_RS12195;Dbxref=Genbank:WP_078274446.1;Name=WP_078274446.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12195;product=hypothetical protein;protein_id=WP_078274446.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2384950 2385240 . - . ID=gene-LP088_RS12200;Name=LP088_RS12200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12200;old_locus_tag=LP088_12085 NZ_CP087814.1 Protein Homology CDS 2384950 2385240 . - 0 ID=cds-WP_112741773.1;Parent=gene-LP088_RS12200;Dbxref=Genbank:WP_112741773.1;Name=WP_112741773.1;Ontology_term=GO:0005506;gbkey=CDS;go_function=iron ion binding|0005506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003662180.1;locus_tag=LP088_RS12200;product=oxidative damage protection protein;protein_id=WP_112741773.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2385347 2385733 . - . ID=gene-LP088_RS12205;Name=LP088_RS12205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12205;old_locus_tag=LP088_12090 NZ_CP087814.1 Protein Homology CDS 2385347 2385733 . - 0 ID=cds-WP_078274448.1;Parent=gene-LP088_RS12205;Dbxref=Genbank:WP_078274448.1;Name=WP_078274448.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013970.2;locus_tag=LP088_RS12205;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_078274448.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2385733 2385945 . - . ID=gene-LP088_RS12210;Name=LP088_RS12210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12210;old_locus_tag=LP088_12095 NZ_CP087814.1 GeneMarkS-2+ CDS 2385733 2385945 . - 0 ID=cds-WP_078274449.1;Parent=gene-LP088_RS12210;Dbxref=Genbank:WP_078274449.1;Name=WP_078274449.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12210;product=DUF2281 domain-containing protein;protein_id=WP_078274449.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2386034 2387401 . - . ID=gene-LP088_RS12215;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=LP088_RS12215;old_locus_tag=LP088_12100 NZ_CP087814.1 Protein Homology CDS 2386034 2387401 . - 0 ID=cds-WP_208624098.1;Parent=gene-LP088_RS12215;Dbxref=Genbank:WP_208624098.1;Name=WP_208624098.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512470.1;locus_tag=LP088_RS12215;product=argininosuccinate lyase;protein_id=WP_208624098.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2387542 2388615 . - . ID=gene-LP088_RS12220;Name=LP088_RS12220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12220;old_locus_tag=LP088_12105 NZ_CP087814.1 Protein Homology CDS 2387542 2388615 . - 0 ID=cds-WP_078274451.1;Parent=gene-LP088_RS12220;Dbxref=Genbank:WP_078274451.1;Name=WP_078274451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513117.1;locus_tag=LP088_RS12220;product=DUF475 domain-containing protein;protein_id=WP_078274451.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2389096 2389344 . - . ID=gene-LP088_RS12225;Name=LP088_RS12225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12225;old_locus_tag=LP088_12110 NZ_CP087814.1 Protein Homology CDS 2389096 2389344 . - 0 ID=cds-WP_078274452.1;Parent=gene-LP088_RS12225;Dbxref=Genbank:WP_078274452.1;Name=WP_078274452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657397.1;locus_tag=LP088_RS12225;product=YfhL family 4Fe-4S dicluster ferredoxin;protein_id=WP_078274452.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2389348 2389881 . - . ID=gene-LP088_RS12230;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=LP088_RS12230;old_locus_tag=LP088_12115 NZ_CP087814.1 Protein Homology CDS 2389348 2389881 . - 0 ID=cds-WP_078274453.1;Parent=gene-LP088_RS12230;Dbxref=Genbank:WP_078274453.1;Name=WP_078274453.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0003723;gbkey=CDS;gene=rimM;go_function=RNA binding|0003723||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514628.1;locus_tag=LP088_RS12230;product=ribosome maturation factor RimM;protein_id=WP_078274453.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2390037 2390282 . - . ID=gene-LP088_RS12235;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=LP088_RS12235;old_locus_tag=LP088_12120 NZ_CP087814.1 Protein Homology CDS 2390037 2390282 . - 0 ID=cds-WP_029102950.1;Parent=gene-LP088_RS12235;Dbxref=Genbank:WP_029102950.1;Name=WP_029102950.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011281274.1;locus_tag=LP088_RS12235;product=30S ribosomal protein S16;protein_id=WP_029102950.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2390559 2391995 . + . ID=gene-LP088_RS12240;Name=LP088_RS12240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12240;old_locus_tag=LP088_12125 NZ_CP087814.1 Protein Homology CDS 2390559 2391995 . + 0 ID=cds-WP_078274454.1;Parent=gene-LP088_RS12240;Dbxref=Genbank:WP_078274454.1;Name=WP_078274454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003658981.1;locus_tag=LP088_RS12240;product=ATP-binding protein;protein_id=WP_078274454.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2392053 2392223 . - . ID=gene-LP088_RS12245;Name=LP088_RS12245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12245;old_locus_tag=LP088_12130 NZ_CP087814.1 GeneMarkS-2+ CDS 2392053 2392223 . - 0 ID=cds-WP_158079662.1;Parent=gene-LP088_RS12245;Dbxref=Genbank:WP_158079662.1;Name=WP_158079662.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12245;product=hypothetical protein;protein_id=WP_158079662.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2392303 2393982 . - . ID=gene-LP088_RS12250;Name=LP088_RS12250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12250;old_locus_tag=LP088_12135 NZ_CP087814.1 Protein Homology CDS 2392303 2393982 . - 0 ID=cds-WP_078274455.1;Parent=gene-LP088_RS12250;Dbxref=Genbank:WP_078274455.1;Name=WP_078274455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007394506.1;locus_tag=LP088_RS12250;product=ATP-binding protein;protein_id=WP_078274455.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2394077 2394799 . - . ID=gene-LP088_RS12255;Name=LP088_RS12255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12255;old_locus_tag=LP088_12140 NZ_CP087814.1 Protein Homology CDS 2394077 2394799 . - 0 ID=cds-WP_029102947.1;Parent=gene-LP088_RS12255;Dbxref=Genbank:WP_029102947.1;Name=WP_029102947.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003669345.1;locus_tag=LP088_RS12255;product=winged helix-turn-helix domain-containing protein;protein_id=WP_029102947.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2394939 2395355 . - . ID=gene-LP088_RS12260;Name=LP088_RS12260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12260;old_locus_tag=LP088_12145 NZ_CP087814.1 Protein Homology CDS 2394939 2395355 . - 0 ID=cds-WP_078274457.1;Parent=gene-LP088_RS12260;Dbxref=Genbank:WP_078274457.1;Name=WP_078274457.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003658976.1;locus_tag=LP088_RS12260;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_078274457.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2395441 2396865 . - . ID=gene-LP088_RS12265;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=LP088_RS12265;old_locus_tag=LP088_12150 NZ_CP087814.1 Protein Homology CDS 2395441 2396865 . - 0 ID=cds-WP_112741772.1;Parent=gene-LP088_RS12265;Dbxref=Genbank:WP_112741772.1;Name=WP_112741772.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpD;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003658974.1;locus_tag=LP088_RS12265;product=F0F1 ATP synthase subunit beta;protein_id=WP_112741772.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2396903 2397775 . - . ID=gene-LP088_RS12270;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=LP088_RS12270;old_locus_tag=LP088_12155 NZ_CP087814.1 Protein Homology CDS 2396903 2397775 . - 0 ID=cds-WP_078274458.1;Parent=gene-LP088_RS12270;Dbxref=Genbank:WP_078274458.1;Name=WP_078274458.1;Ontology_term=GO:0015986,GO:0046933,GO:0045261;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011281280.1;locus_tag=LP088_RS12270;product=F0F1 ATP synthase subunit gamma;protein_id=WP_078274458.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2397842 2399386 . - . ID=gene-LP088_RS12275;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=LP088_RS12275;old_locus_tag=LP088_12160 NZ_CP087814.1 Protein Homology CDS 2397842 2399386 . - 0 ID=cds-WP_078274459.1;Parent=gene-LP088_RS12275;Dbxref=Genbank:WP_078274459.1;Name=WP_078274459.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpA;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004997344.1;locus_tag=LP088_RS12275;product=F0F1 ATP synthase subunit alpha;protein_id=WP_078274459.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2399420 2400061 . - . ID=gene-LP088_RS12280;Name=LP088_RS12280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12280;old_locus_tag=LP088_12165 NZ_CP087814.1 Protein Homology CDS 2399420 2400061 . - 0 ID=cds-WP_112741771.1;Parent=gene-LP088_RS12280;Dbxref=Genbank:WP_112741771.1;Name=WP_112741771.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514636.1;locus_tag=LP088_RS12280;product=F0F1 ATP synthase subunit delta;protein_id=WP_112741771.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2400074 2400544 . - . ID=gene-LP088_RS12285;Name=LP088_RS12285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12285;old_locus_tag=LP088_12170 NZ_CP087814.1 Protein Homology CDS 2400074 2400544 . - 0 ID=cds-WP_029102940.1;Parent=gene-LP088_RS12285;Dbxref=Genbank:WP_029102940.1;Name=WP_029102940.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016654736.1;locus_tag=LP088_RS12285;product=F0F1 ATP synthase subunit B;protein_id=WP_029102940.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2400641 2400886 . - . ID=gene-LP088_RS12290;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=LP088_RS12290;old_locus_tag=LP088_12175 NZ_CP087814.1 Protein Homology CDS 2400641 2400886 . - 0 ID=cds-WP_003658962.1;Parent=gene-LP088_RS12290;Dbxref=Genbank:WP_003658962.1;Name=WP_003658962.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003658962.1;locus_tag=LP088_RS12290;product=F0F1 ATP synthase subunit C;protein_id=WP_003658962.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2400935 2401819 . - . ID=gene-LP088_RS12295;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=LP088_RS12295;old_locus_tag=LP088_12180 NZ_CP087814.1 Protein Homology CDS 2400935 2401819 . - 0 ID=cds-WP_078274461.1;Parent=gene-LP088_RS12295;Dbxref=Genbank:WP_078274461.1;Name=WP_078274461.1;Ontology_term=GO:0015986,GO:0015078,GO:0045263;gbkey=CDS;gene=atpB;go_component=proton-transporting ATP synthase complex%2C coupling factor F(o)|0045263||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011281284.1;locus_tag=LP088_RS12295;product=F0F1 ATP synthase subunit A;protein_id=WP_078274461.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2402480 2402866 . - . ID=gene-LP088_RS12300;Name=LP088_RS12300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12300;old_locus_tag=LP088_12185 NZ_CP087814.1 Protein Homology CDS 2402480 2402866 . - 0 ID=cds-WP_078274462.1;Parent=gene-LP088_RS12300;Dbxref=Genbank:WP_078274462.1;Name=WP_078274462.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015834.2;locus_tag=LP088_RS12300;product=ATP synthase subunit I;protein_id=WP_078274462.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2403128 2403982 . - . ID=gene-LP088_RS12305;Name=LP088_RS12305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12305;old_locus_tag=LP088_12190 NZ_CP087814.1 Protein Homology CDS 2403128 2403982 . - 0 ID=cds-WP_078274478.1;Parent=gene-LP088_RS12305;Dbxref=Genbank:WP_078274478.1;Name=WP_078274478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007394518.1;locus_tag=LP088_RS12305;product=metal ABC transporter substrate-binding protein;protein_id=WP_078274478.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2404273 2404776 . + . ID=gene-LP088_RS12310;Name=LP088_RS12310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12310;old_locus_tag=LP088_12195 NZ_CP087814.1 Protein Homology CDS 2404273 2404776 . + 0 ID=cds-WP_078274464.1;Parent=gene-LP088_RS12310;Dbxref=Genbank:WP_078274464.1;Name=WP_078274464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010197967.1;locus_tag=LP088_RS12310;product=transcriptional repressor;protein_id=WP_078274464.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2404763 2405512 . + . ID=gene-LP088_RS12315;Name=LP088_RS12315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12315;old_locus_tag=LP088_12200 NZ_CP087814.1 Protein Homology CDS 2404763 2405512 . + 0 ID=cds-WP_078274465.1;Parent=gene-LP088_RS12315;Dbxref=Genbank:WP_078274465.1;Name=WP_078274465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514642.1;locus_tag=LP088_RS12315;product=metal ABC transporter ATP-binding protein;protein_id=WP_078274465.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2405515 2406315 . + . ID=gene-LP088_RS12320;Name=LP088_RS12320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12320;old_locus_tag=LP088_12205 NZ_CP087814.1 Protein Homology CDS 2405515 2406315 . + 0 ID=cds-WP_112741770.1;Parent=gene-LP088_RS12320;Dbxref=Genbank:WP_112741770.1;Name=WP_112741770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004970154.1;locus_tag=LP088_RS12320;product=metal ABC transporter permease;protein_id=WP_112741770.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2406670 2407488 . + . ID=gene-LP088_RS12325;Name=LP088_RS12325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12325;old_locus_tag=LP088_12210 NZ_CP087814.1 Protein Homology CDS 2406670 2407488 . + 0 ID=cds-WP_162860337.1;Parent=gene-LP088_RS12325;Dbxref=Genbank:WP_162860337.1;Name=WP_162860337.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF012376.2;locus_tag=LP088_RS12325;product=metallophosphoesterase;protein_id=WP_162860337.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2407721 2408137 . + . ID=gene-LP088_RS12330;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=LP088_RS12330;old_locus_tag=LP088_12215 NZ_CP087814.1 Protein Homology CDS 2407721 2408137 . + 0 ID=cds-WP_112741768.1;Parent=gene-LP088_RS12330;Dbxref=Genbank:WP_112741768.1;Name=WP_112741768.1;Ontology_term=GO:0006355,GO:0019899;gbkey=CDS;gene=dksA;go_function=enzyme binding|0019899||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007115815.1;locus_tag=LP088_RS12330;product=RNA polymerase-binding protein DksA;protein_id=WP_112741768.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2408145 2409071 . + . ID=gene-LP088_RS12335;Name=gluQRS;gbkey=Gene;gene=gluQRS;gene_biotype=protein_coding;locus_tag=LP088_RS12335;old_locus_tag=LP088_12220 NZ_CP087814.1 Protein Homology CDS 2408145 2409071 . + 0 ID=cds-WP_078274469.1;Parent=gene-LP088_RS12335;Dbxref=Genbank:WP_078274469.1;Name=WP_078274469.1;Ontology_term=GO:0043039,GO:0004812;gbkey=CDS;gene=gluQRS;go_function=aminoacyl-tRNA ligase activity|0004812||IEA;go_process=tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010197975.1;locus_tag=LP088_RS12335;product=tRNA glutamyl-Q(34) synthetase GluQRS;protein_id=WP_078274469.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2409086 2410261 . - . ID=gene-LP088_RS12340;Name=LP088_RS12340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12340;old_locus_tag=LP088_12225 NZ_CP087814.1 Protein Homology CDS 2409086 2410261 . - 0 ID=cds-WP_051225921.1;Parent=gene-LP088_RS12340;Dbxref=Genbank:WP_051225921.1;Name=WP_051225921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444441.1;locus_tag=LP088_RS12340;product=putative lipid II flippase FtsW;protein_id=WP_051225921.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2410537 2411922 . - . ID=gene-LP088_RS12345;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=LP088_RS12345;old_locus_tag=LP088_12230 NZ_CP087814.1 Protein Homology CDS 2410537 2411922 . - 0 ID=cds-WP_264690331.1;Parent=gene-LP088_RS12345;Dbxref=Genbank:WP_264690331.1;Name=WP_264690331.1;Ontology_term=GO:0009252,GO:0008764;gbkey=CDS;gene=murD;go_function=UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003663176.1;locus_tag=LP088_RS12345;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_264690331.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2412205 2412543 . + . ID=gene-LP088_RS12350;Name=glnK;gbkey=Gene;gene=glnK;gene_biotype=protein_coding;locus_tag=LP088_RS12350;old_locus_tag=LP088_12235 NZ_CP087814.1 Protein Homology CDS 2412205 2412543 . + 0 ID=cds-WP_029102928.1;Parent=gene-LP088_RS12350;Dbxref=Genbank:WP_029102928.1;Name=WP_029102928.1;Ontology_term=GO:0006808,GO:0030234;gbkey=CDS;gene=glnK;go_function=enzyme regulator activity|0030234||IEA;go_process=regulation of nitrogen utilization|0006808||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004997399.1;locus_tag=LP088_RS12350;product=P-II family nitrogen regulator;protein_id=WP_029102928.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2412599 2412964 . - . ID=gene-LP088_RS12355;Name=LP088_RS12355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12355;old_locus_tag=LP088_12240 NZ_CP087814.1 Protein Homology CDS 2412599 2412964 . - 0 ID=cds-WP_112741766.1;Parent=gene-LP088_RS12355;Dbxref=Genbank:WP_112741766.1;Name=WP_112741766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003656921.1;locus_tag=LP088_RS12355;product=hypothetical protein;protein_id=WP_112741766.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2413132 2413386 . - . ID=gene-LP088_RS12360;Name=LP088_RS12360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12360;old_locus_tag=LP088_12245 NZ_CP087814.1 GeneMarkS-2+ CDS 2413132 2413386 . - 0 ID=cds-WP_112741765.1;Parent=gene-LP088_RS12360;Dbxref=Genbank:WP_112741765.1;Name=WP_112741765.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12360;product=hypothetical protein;protein_id=WP_112741765.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2413396 2414511 . - . ID=gene-LP088_RS12365;Name=LP088_RS12365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12365;old_locus_tag=LP088_12250 NZ_CP087814.1 Protein Homology CDS 2413396 2414511 . - 0 ID=cds-WP_228157755.1;Parent=gene-LP088_RS12365;Dbxref=Genbank:WP_228157755.1;Name=WP_228157755.1;Ontology_term=GO:0003676,GO:0016787,GO:0046872;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011961507.1;locus_tag=LP088_RS12365;product=DNA/RNA non-specific endonuclease;protein_id=WP_228157755.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2414719 2415882 . + . ID=gene-LP088_RS12370;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=LP088_RS12370;old_locus_tag=LP088_12255 NZ_CP087814.1 Protein Homology CDS 2414719 2415882 . + 0 ID=cds-WP_228157754.1;Parent=gene-LP088_RS12370;Dbxref=Genbank:WP_228157754.1;Name=WP_228157754.1;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0004844;gbkey=CDS;gene=mutY;go_function=uracil DNA N-glycosylase activity|0004844||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007394539.1;locus_tag=LP088_RS12370;product=A/G-specific adenine glycosylase;protein_id=WP_228157754.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2415949 2416887 . - . ID=gene-LP088_RS12375;Name=LP088_RS12375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12375;old_locus_tag=LP088_12260 NZ_CP087814.1 Protein Homology CDS 2415949 2416887 . - 0 ID=cds-WP_078274476.1;Parent=gene-LP088_RS12375;Dbxref=Genbank:WP_078274476.1;Name=WP_078274476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444350.1;locus_tag=LP088_RS12375;product=polyprenyl synthetase family protein;protein_id=WP_078274476.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2417025 2417100 . + . ID=gene-LP088_RS12380;Name=LP088_RS12380;gbkey=Gene;gene_biotype=tRNA;locus_tag=LP088_RS12380;old_locus_tag=LP088_12265 NZ_CP087814.1 tRNAscan-SE tRNA 2417025 2417100 . + . ID=rna-LP088_RS12380;Parent=gene-LP088_RS12380;anticodon=(pos:2417058..2417060);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS12380;product=tRNA-Phe NZ_CP087814.1 tRNAscan-SE exon 2417025 2417100 . + . ID=exon-LP088_RS12380-1;Parent=rna-LP088_RS12380;anticodon=(pos:2417058..2417060);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS12380;product=tRNA-Phe NZ_CP087814.1 RefSeq gene 2417279 2417647 . - . ID=gene-LP088_RS12385;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=LP088_RS12385;old_locus_tag=LP088_12270 NZ_CP087814.1 Protein Homology CDS 2417279 2417647 . - 0 ID=cds-WP_062501004.1;Parent=gene-LP088_RS12385;Dbxref=Genbank:WP_062501004.1;Name=WP_062501004.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007115984.1;locus_tag=LP088_RS12385;product=50S ribosomal protein L19;protein_id=WP_062501004.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2417804 2419648 . - . ID=gene-LP088_RS12390;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=LP088_RS12390;old_locus_tag=LP088_12275 NZ_CP087814.1 Protein Homology CDS 2417804 2419648 . - 0 ID=cds-WP_078274477.1;Parent=gene-LP088_RS12390;Dbxref=Genbank:WP_078274477.1;Name=WP_078274477.1;Ontology_term=GO:0006040,GO:0009252,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=amino sugar metabolic process|0006040||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000334171.1;locus_tag=LP088_RS12390;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_078274477.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2419906 2421096 . - . ID=gene-LP088_RS12395;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=LP088_RS12395;old_locus_tag=LP088_12280 NZ_CP087814.1 Protein Homology CDS 2419906 2421096 . - 0 ID=cds-WP_029102688.1-2;Parent=gene-LP088_RS12395;Dbxref=Genbank:WP_029102688.1;Name=WP_029102688.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011961077.1;locus_tag=LP088_RS12395;product=elongation factor Tu;protein_id=WP_029102688.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2421458 2422219 . + . ID=gene-LP088_RS12400;Name=LP088_RS12400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12400;old_locus_tag=LP088_12285 NZ_CP087814.1 Protein Homology CDS 2421458 2422219 . + 0 ID=cds-WP_208624034.1-7;Parent=gene-LP088_RS12400;Dbxref=Genbank:WP_208624034.1;Name=WP_208624034.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF012870.2;locus_tag=LP088_RS12400;product=DDE-type integrase/transposase/recombinase;protein_id=WP_208624034.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2422281 2423192 . - . ID=gene-LP088_RS12405;Name=LP088_RS12405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12405;old_locus_tag=LP088_12290 NZ_CP087814.1 Protein Homology CDS 2422281 2423192 . - 0 ID=cds-WP_078275357.1-7;Parent=gene-LP088_RS12405;Dbxref=Genbank:WP_078275357.1;Name=WP_078275357.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004282326.1;locus_tag=LP088_RS12405;product=IS982 family transposase;protein_id=WP_078275357.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2423246 2423821 . - . ID=gene-LP088_RS12410;Name=LP088_RS12410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12410;old_locus_tag=LP088_12295 NZ_CP087814.1 Protein Homology CDS 2423246 2423821 . - 0 ID=cds-WP_264676346.1;Parent=gene-LP088_RS12410;Dbxref=Genbank:WP_264676346.1;Name=WP_264676346.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021611.2;locus_tag=LP088_RS12410;product=DUF2345 domain-containing protein;protein_id=WP_264676346.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2423828 2424814 . - . ID=gene-LP088_RS12415;Name=LP088_RS12415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12415;old_locus_tag=LP088_12300 NZ_CP087814.1 GeneMarkS-2+ CDS 2423828 2424814 . - 0 ID=cds-WP_143821757.1;Parent=gene-LP088_RS12415;Dbxref=Genbank:WP_143821757.1;Name=WP_143821757.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12415;product=hypothetical protein;protein_id=WP_143821757.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2424924 2426162 . - . ID=gene-LP088_RS12420;Name=LP088_RS12420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12420;old_locus_tag=LP088_12305 NZ_CP087814.1 GeneMarkS-2+ CDS 2424924 2426162 . - 0 ID=cds-WP_078275298.1;Parent=gene-LP088_RS12420;Dbxref=Genbank:WP_078275298.1;Name=WP_078275298.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12420;product=hypothetical protein;protein_id=WP_078275298.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2426166 2428991 . - . ID=gene-LP088_RS12425;Name=tssI;gbkey=Gene;gene=tssI;gene_biotype=protein_coding;locus_tag=LP088_RS12425;old_locus_tag=LP088_12310 NZ_CP087814.1 Protein Homology CDS 2426166 2428991 . - 0 ID=cds-WP_112741763.1;Parent=gene-LP088_RS12425;Dbxref=Genbank:WP_112741763.1;Name=WP_112741763.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssI;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: protein motif:HMM:TIGR03361.1;locus_tag=LP088_RS12425;product=type VI secretion system tip protein VgrG;protein_id=WP_112741763.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2429289 2429774 . + . ID=gene-LP088_RS12430;Name=LP088_RS12430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12430;old_locus_tag=LP088_12315 NZ_CP087814.1 Protein Homology CDS 2429289 2429774 . + 0 ID=cds-WP_062500990.1;Parent=gene-LP088_RS12430;Dbxref=Genbank:WP_062500990.1;Name=WP_062500990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004861869.1;locus_tag=LP088_RS12430;product=type VI secretion system tube protein Hcp;protein_id=WP_062500990.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2429851 2430612 . + . ID=gene-LP088_RS12435;Name=LP088_RS12435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12435;old_locus_tag=LP088_12320 NZ_CP087814.1 Protein Homology CDS 2429851 2430612 . + 0 ID=cds-WP_078274479.1;Parent=gene-LP088_RS12435;Dbxref=Genbank:WP_078274479.1;Name=WP_078274479.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018699.2;locus_tag=LP088_RS12435;product=type VI secretion system accessory protein TagJ;protein_id=WP_078274479.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2430616 2431071 . + . ID=gene-LP088_RS12440;Name=LP088_RS12440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12440;old_locus_tag=LP088_12325 NZ_CP087814.1 Protein Homology CDS 2430616 2431071 . + 0 ID=cds-WP_078274480.1;Parent=gene-LP088_RS12440;Dbxref=Genbank:WP_078274480.1;Name=WP_078274480.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016829.2;locus_tag=LP088_RS12440;product=GPW/gp25 family protein;protein_id=WP_078274480.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2431088 2432917 . + . ID=gene-LP088_RS12445;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=LP088_RS12445;old_locus_tag=LP088_12330 NZ_CP087814.1 Protein Homology CDS 2431088 2432917 . + 0 ID=cds-WP_078274481.1;Parent=gene-LP088_RS12445;Dbxref=Genbank:WP_078274481.1;Name=WP_078274481.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssF;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: protein motif:HMM:NF017733.2;locus_tag=LP088_RS12445;product=type VI secretion system baseplate subunit TssF;protein_id=WP_078274481.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2432920 2433894 . + . ID=gene-LP088_RS12450;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=LP088_RS12450;old_locus_tag=LP088_12335 NZ_CP087814.1 Protein Homology CDS 2432920 2433894 . + 0 ID=cds-WP_078274482.1;Parent=gene-LP088_RS12450;Dbxref=Genbank:WP_078274482.1;Name=WP_078274482.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: protein motif:HMM:TIGR03347.1;locus_tag=LP088_RS12450;product=type VI secretion system baseplate subunit TssG;protein_id=WP_078274482.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2433903 2434544 . + . ID=gene-LP088_RS12455;Name=LP088_RS12455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12455;old_locus_tag=LP088_12340 NZ_CP087814.1 GeneMarkS-2+ CDS 2433903 2434544 . + 0 ID=cds-WP_078274483.1;Parent=gene-LP088_RS12455;Dbxref=Genbank:WP_078274483.1;Name=WP_078274483.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12455;product=hypothetical protein;protein_id=WP_078274483.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2434569 2435207 . + . ID=gene-LP088_RS12460;Name=LP088_RS12460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12460;old_locus_tag=LP088_12345 NZ_CP087814.1 GeneMarkS-2+ CDS 2434569 2435207 . + 0 ID=cds-WP_078274484.1;Parent=gene-LP088_RS12460;Dbxref=Genbank:WP_078274484.1;Name=WP_078274484.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12460;product=hypothetical protein;protein_id=WP_078274484.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2435207 2435998 . + . ID=gene-LP088_RS12465;Name=LP088_RS12465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12465;old_locus_tag=LP088_12350 NZ_CP087814.1 GeneMarkS-2+ CDS 2435207 2435998 . + 0 ID=cds-WP_078274485.1;Parent=gene-LP088_RS12465;Dbxref=Genbank:WP_078274485.1;Name=WP_078274485.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12465;product=hypothetical protein;protein_id=WP_078274485.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2436441 2436869 . + . ID=gene-LP088_RS12470;Name=LP088_RS12470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12470;old_locus_tag=LP088_12355 NZ_CP087814.1 GeneMarkS-2+ CDS 2436441 2436869 . + 0 ID=cds-WP_078274487.1;Parent=gene-LP088_RS12470;Dbxref=Genbank:WP_078274487.1;Name=WP_078274487.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12470;product=hypothetical protein;protein_id=WP_078274487.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2436893 2437321 . + . ID=gene-LP088_RS12475;Name=LP088_RS12475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12475;old_locus_tag=LP088_12360 NZ_CP087814.1 GeneMarkS-2+ CDS 2436893 2437321 . + 0 ID=cds-WP_078274488.1;Parent=gene-LP088_RS12475;Dbxref=Genbank:WP_078274488.1;Name=WP_078274488.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12475;product=hypothetical protein;protein_id=WP_078274488.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2437479 2437868 . + . ID=gene-LP088_RS12480;Name=LP088_RS12480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12480;old_locus_tag=LP088_12365 NZ_CP087814.1 GeneMarkS-2+ CDS 2437479 2437868 . + 0 ID=cds-WP_078274489.1;Parent=gene-LP088_RS12480;Dbxref=Genbank:WP_078274489.1;Name=WP_078274489.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12480;product=hypothetical protein;protein_id=WP_078274489.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2437875 2438153 . + . ID=gene-LP088_RS12485;Name=LP088_RS12485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12485;old_locus_tag=LP088_12370 NZ_CP087814.1 Protein Homology CDS 2437875 2438153 . + 0 ID=cds-WP_078274490.1;Parent=gene-LP088_RS12485;Dbxref=Genbank:WP_078274490.1;Name=WP_078274490.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026945.2;locus_tag=LP088_RS12485;product=polymorphic toxin type 44 domain-containing protein;protein_id=WP_078274490.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2438265 2438726 . + . ID=gene-LP088_RS12490;Name=LP088_RS12490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12490;old_locus_tag=LP088_12375 NZ_CP087814.1 GeneMarkS-2+ CDS 2438265 2438726 . + 0 ID=cds-WP_078274491.1;Parent=gene-LP088_RS12490;Dbxref=Genbank:WP_078274491.1;Name=WP_078274491.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12490;product=hypothetical protein;protein_id=WP_078274491.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2438987 2439062 . - . ID=gene-LP088_RS12495;Name=LP088_RS12495;gbkey=Gene;gene_biotype=tRNA;locus_tag=LP088_RS12495;old_locus_tag=LP088_12380 NZ_CP087814.1 tRNAscan-SE tRNA 2438987 2439062 . - . ID=rna-LP088_RS12495;Parent=gene-LP088_RS12495;anticodon=(pos:complement(2439027..2439029));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS12495;product=tRNA-Gly NZ_CP087814.1 tRNAscan-SE exon 2438987 2439062 . - . ID=exon-LP088_RS12495-1;Parent=rna-LP088_RS12495;anticodon=(pos:complement(2439027..2439029));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS12495;product=tRNA-Gly NZ_CP087814.1 RefSeq gene 2439185 2440672 . - . ID=gene-LP088_RS12500;Name=LP088_RS12500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12500;old_locus_tag=LP088_12385 NZ_CP087814.1 Protein Homology CDS 2439185 2440672 . - 0 ID=cds-WP_078274492.1;Parent=gene-LP088_RS12500;Dbxref=Genbank:WP_078274492.1;Name=WP_078274492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005233947.1;locus_tag=LP088_RS12500;product=Ppx/GppA family phosphatase;protein_id=WP_078274492.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 2440842 2441216 . - . ID=gene-LP088_RS12505;Name=LP088_RS12505;end_range=2441216,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS12505;old_locus_tag=LP088_12390;partial=true;pseudo=true NZ_CP087814.1 Protein Homology CDS 2440842 2441216 . - 0 ID=cds-LP088_RS12505;Parent=gene-LP088_RS12505;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2441216,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657373.1;locus_tag=LP088_RS12505;partial=true;product=ATP-binding protein;pseudo=true;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 2441212 2441580 . - . ID=gene-LP088_RS12510;Name=LP088_RS12510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS12510;old_locus_tag=LP088_12395;partial=true;pseudo=true;start_range=.,2441212 NZ_CP087814.1 Protein Homology CDS 2441212 2441580 . - 0 ID=cds-LP088_RS12510;Parent=gene-LP088_RS12510;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009767296.1;locus_tag=LP088_RS12510;partial=true;product=response regulator;pseudo=true;start_range=.,2441212;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 2441608 2442087 . - . ID=gene-LP088_RS12515;Name=LP088_RS12515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS12515;old_locus_tag=LP088_12400;partial=true;pseudo=true;start_range=.,2441608 NZ_CP087814.1 Protein Homology CDS 2441608 2442087 . - 0 ID=cds-LP088_RS12515;Parent=gene-LP088_RS12515;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657367.1;locus_tag=LP088_RS12515;partial=true;product=phosphate ABC transporter permease subunit PstC;pseudo=true;start_range=.,2441608;transl_table=11 NZ_CP087814.1 RefSeq gene 2442347 2443486 . - . ID=gene-LP088_RS12520;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=LP088_RS12520;old_locus_tag=LP088_12405 NZ_CP087814.1 Protein Homology CDS 2442347 2443486 . - 0 ID=cds-WP_078274497.1;Parent=gene-LP088_RS12520;Dbxref=Genbank:WP_078274497.1;Name=WP_078274497.1;Ontology_term=GO:0035435,GO:0042301,GO:0043190;gbkey=CDS;gene=pstS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=phosphate ion binding|0042301||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657366.1;locus_tag=LP088_RS12520;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_078274497.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2443785 2445287 . + . ID=gene-LP088_RS12525;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=LP088_RS12525;old_locus_tag=LP088_12410 NZ_CP087814.1 Protein Homology CDS 2443785 2445287 . + 0 ID=cds-WP_112741758.1;Parent=gene-LP088_RS12525;Dbxref=Genbank:WP_112741758.1;Name=WP_112741758.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003662052.1;locus_tag=LP088_RS12525;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_112741758.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2445563 2449270 . - . ID=gene-LP088_RS12530;Name=LP088_RS12530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12530;old_locus_tag=LP088_12415 NZ_CP087814.1 Protein Homology CDS 2445563 2449270 . - 0 ID=cds-WP_264675997.1;Parent=gene-LP088_RS12530;Dbxref=Genbank:WP_264675997.1;Name=WP_264675997.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017183.2;locus_tag=LP088_RS12530;product=putative Ig domain-containing protein;protein_id=WP_264675997.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2449300 2449734 . - . ID=gene-LP088_RS12535;Name=LP088_RS12535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12535;old_locus_tag=LP088_12420 NZ_CP087814.1 GeneMarkS-2+ CDS 2449300 2449734 . - 0 ID=cds-WP_162860335.1;Parent=gene-LP088_RS12535;Dbxref=Genbank:WP_162860335.1;Name=WP_162860335.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12535;product=hypothetical protein;protein_id=WP_162860335.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2449824 2450255 . - . ID=gene-LP088_RS12540;Name=LP088_RS12540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12540;old_locus_tag=LP088_12425 NZ_CP087814.1 GeneMarkS-2+ CDS 2449824 2450255 . - 0 ID=cds-WP_112741755.1;Parent=gene-LP088_RS12540;Dbxref=Genbank:WP_112741755.1;Name=WP_112741755.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12540;product=hypothetical protein;protein_id=WP_112741755.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2450264 2450527 . - . ID=gene-LP088_RS12545;Name=LP088_RS12545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12545;old_locus_tag=LP088_12430 NZ_CP087814.1 GeneMarkS-2+ CDS 2450264 2450527 . - 0 ID=cds-WP_112741754.1;Parent=gene-LP088_RS12545;Dbxref=Genbank:WP_112741754.1;Name=WP_112741754.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12545;product=SEL1-like repeat protein;protein_id=WP_112741754.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2450942 2451076 . - . ID=gene-LP088_RS12550;Name=LP088_RS12550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12550 NZ_CP087814.1 GeneMarkS-2+ CDS 2450942 2451076 . - 0 ID=cds-WP_264675998.1;Parent=gene-LP088_RS12550;Dbxref=Genbank:WP_264675998.1;Name=WP_264675998.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12550;product=hypothetical protein;protein_id=WP_264675998.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2451468 2452115 . - . ID=gene-LP088_RS12555;Name=LP088_RS12555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12555;old_locus_tag=LP088_12435 NZ_CP087814.1 GeneMarkS-2+ CDS 2451468 2452115 . - 0 ID=cds-WP_078274503.1;Parent=gene-LP088_RS12555;Dbxref=Genbank:WP_078274503.1;Name=WP_078274503.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12555;product=hypothetical protein;protein_id=WP_078274503.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2452497 2453936 . - . ID=gene-LP088_RS12560;Name=LP088_RS12560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12560;old_locus_tag=LP088_12440 NZ_CP087814.1 Protein Homology CDS 2452497 2453936 . - 0 ID=cds-WP_112741753.1;Parent=gene-LP088_RS12560;Dbxref=Genbank:WP_112741753.1;Name=WP_112741753.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012573.2;locus_tag=LP088_RS12560;product=calcium-binding protein;protein_id=WP_112741753.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2454057 2454455 . - . ID=gene-LP088_RS12565;Name=LP088_RS12565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12565;old_locus_tag=LP088_12445 NZ_CP087814.1 GeneMarkS-2+ CDS 2454057 2454455 . - 0 ID=cds-WP_264675999.1;Parent=gene-LP088_RS12565;Dbxref=Genbank:WP_264675999.1;Name=WP_264675999.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12565;product=hypothetical protein;protein_id=WP_264675999.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2454439 2454723 . - . ID=gene-LP088_RS12570;Name=LP088_RS12570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12570;old_locus_tag=LP088_12450 NZ_CP087814.1 GeneMarkS-2+ CDS 2454439 2454723 . - 0 ID=cds-WP_078274501.1;Parent=gene-LP088_RS12570;Dbxref=Genbank:WP_078274501.1;Name=WP_078274501.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12570;product=SEL1-like repeat protein;protein_id=WP_078274501.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2454959 2455318 . - . ID=gene-LP088_RS12575;Name=LP088_RS12575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12575;old_locus_tag=LP088_12455 NZ_CP087814.1 GeneMarkS-2+ CDS 2454959 2455318 . - 0 ID=cds-WP_112741751.1;Parent=gene-LP088_RS12575;Dbxref=Genbank:WP_112741751.1;Name=WP_112741751.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12575;product=hypothetical protein;protein_id=WP_112741751.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2455397 2455795 . - . ID=gene-LP088_RS12580;Name=LP088_RS12580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12580;old_locus_tag=LP088_12460 NZ_CP087814.1 Protein Homology CDS 2455397 2455795 . - 0 ID=cds-WP_264676000.1;Parent=gene-LP088_RS12580;Dbxref=Genbank:WP_264676000.1;Name=WP_264676000.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012573.2;locus_tag=LP088_RS12580;product=hypothetical protein;protein_id=WP_264676000.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 2456647 2456772 . - . ID=gene-LP088_RS12585;Name=LP088_RS12585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS12585;old_locus_tag=LP088_12465;partial=true;pseudo=true;start_range=.,2456647 NZ_CP087814.1 Protein Homology CDS 2456647 2456772 . - 0 ID=cds-LP088_RS12585;Parent=gene-LP088_RS12585;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012478345.1;locus_tag=LP088_RS12585;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,2456647;transl_table=11 NZ_CP087814.1 RefSeq gene 2457098 2457376 . + . ID=gene-LP088_RS12590;Name=LP088_RS12590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12590;old_locus_tag=LP088_12470 NZ_CP087814.1 GeneMarkS-2+ CDS 2457098 2457376 . + 0 ID=cds-WP_158079665.1;Parent=gene-LP088_RS12590;Dbxref=Genbank:WP_158079665.1;Name=WP_158079665.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12590;product=hypothetical protein;protein_id=WP_158079665.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2457452 2457856 . + . ID=gene-LP088_RS12595;Name=LP088_RS12595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12595;old_locus_tag=LP088_12475 NZ_CP087814.1 GeneMarkS-2+ CDS 2457452 2457856 . + 0 ID=cds-WP_078274514.1;Parent=gene-LP088_RS12595;Dbxref=Genbank:WP_078274514.1;Name=WP_078274514.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12595;product=hypothetical protein;protein_id=WP_078274514.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2457858 2458745 . + . ID=gene-LP088_RS12600;Name=LP088_RS12600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12600;old_locus_tag=LP088_12480 NZ_CP087814.1 Protein Homology CDS 2457858 2458745 . + 0 ID=cds-WP_078274515.1;Parent=gene-LP088_RS12600;Dbxref=Genbank:WP_078274515.1;Name=WP_078274515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003660453.1;locus_tag=LP088_RS12600;product=class II glutamine amidotransferase;protein_id=WP_078274515.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2458953 2459399 . + . ID=gene-LP088_RS12605;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=LP088_RS12605;old_locus_tag=LP088_12485 NZ_CP087814.1 Protein Homology CDS 2458953 2459399 . + 0 ID=cds-WP_029102984.1;Parent=gene-LP088_RS12605;Dbxref=Genbank:WP_029102984.1;Name=WP_029102984.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=fur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657811.1;locus_tag=LP088_RS12605;product=ferric iron uptake transcriptional regulator;protein_id=WP_029102984.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2459449 2460573 . - . ID=gene-LP088_RS12610;Name=LP088_RS12610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12610;old_locus_tag=LP088_12490 NZ_CP087814.1 Protein Homology CDS 2459449 2460573 . - 0 ID=cds-WP_078274516.1;Parent=gene-LP088_RS12610;Dbxref=Genbank:WP_078274516.1;Name=WP_078274516.1;Ontology_term=GO:0043107,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=type IV pilus-dependent motility|0043107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512664.1;locus_tag=LP088_RS12610;product=PilT/PilU family type 4a pilus ATPase;protein_id=WP_078274516.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2460583 2461629 . - . ID=gene-LP088_RS12615;Name=LP088_RS12615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12615;old_locus_tag=LP088_12495 NZ_CP087814.1 Protein Homology CDS 2460583 2461629 . - 0 ID=cds-WP_078274517.1;Parent=gene-LP088_RS12615;Dbxref=Genbank:WP_078274517.1;Name=WP_078274517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019518649.1;locus_tag=LP088_RS12615;product=type IV pilus twitching motility protein PilT;protein_id=WP_078274517.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2461782 2462486 . + . ID=gene-LP088_RS12620;Name=LP088_RS12620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12620;old_locus_tag=LP088_12500 NZ_CP087814.1 Protein Homology CDS 2461782 2462486 . + 0 ID=cds-WP_112741749.1;Parent=gene-LP088_RS12620;Dbxref=Genbank:WP_112741749.1;Name=WP_112741749.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019672255.1;locus_tag=LP088_RS12620;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=WP_112741749.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2462587 2463216 . - . ID=gene-LP088_RS12625;Name=LP088_RS12625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12625;old_locus_tag=LP088_12505 NZ_CP087814.1 Protein Homology CDS 2462587 2463216 . - 0 ID=cds-WP_078274519.1;Parent=gene-LP088_RS12625;Dbxref=Genbank:WP_078274519.1;Name=WP_078274519.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017016.2;locus_tag=LP088_RS12625;product=cell division protein ZapA;protein_id=WP_078274519.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2463237 2463602 . - . ID=gene-LP088_RS12630;Name=LP088_RS12630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12630;old_locus_tag=LP088_12510 NZ_CP087814.1 Protein Homology CDS 2463237 2463602 . - 0 ID=cds-WP_078274520.1;Parent=gene-LP088_RS12630;Dbxref=Genbank:WP_078274520.1;Name=WP_078274520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657821.1;locus_tag=LP088_RS12630;product=hypothetical protein;protein_id=WP_078274520.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2463750 2464397 . + . ID=gene-LP088_RS12635;Name=LP088_RS12635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12635;old_locus_tag=LP088_12515 NZ_CP087814.1 Protein Homology CDS 2463750 2464397 . + 0 ID=cds-WP_112741748.1;Parent=gene-LP088_RS12635;Dbxref=Genbank:WP_112741748.1;Name=WP_112741748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011961095.1;locus_tag=LP088_RS12635;product=UPF0149 family protein;protein_id=WP_112741748.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2464839 2465918 . + . ID=gene-LP088_RS12640;Name=LP088_RS12640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12640;old_locus_tag=LP088_12520 NZ_CP087814.1 Protein Homology CDS 2464839 2465918 . + 0 ID=cds-WP_115368990.1;Parent=gene-LP088_RS12640;Dbxref=Genbank:WP_115368990.1;Name=WP_115368990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004969794.1;locus_tag=LP088_RS12640;product=zinc-dependent alcohol dehydrogenase family protein;protein_id=WP_115368990.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2466250 2467248 . - . ID=gene-LP088_RS12645;Name=LP088_RS12645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12645;old_locus_tag=LP088_12525 NZ_CP087814.1 Protein Homology CDS 2466250 2467248 . - 0 ID=cds-WP_115368989.1;Parent=gene-LP088_RS12645;Dbxref=Genbank:WP_115368989.1;Name=WP_115368989.1;Ontology_term=GO:0009088,GO:0004413;gbkey=CDS;go_function=homoserine kinase activity|0004413||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657286.1;locus_tag=LP088_RS12645;product=homoserine kinase;protein_id=WP_115368989.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2467581 2469011 . + . ID=gene-LP088_RS12650;Name=yegQ;gbkey=Gene;gene=yegQ;gene_biotype=protein_coding;locus_tag=LP088_RS12650;old_locus_tag=LP088_12530 NZ_CP087814.1 Protein Homology CDS 2467581 2469011 . + 0 ID=cds-WP_078274525.1;Parent=gene-LP088_RS12650;Dbxref=Genbank:WP_078274525.1;Name=WP_078274525.1;gbkey=CDS;gene=yegQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003659137.1;locus_tag=LP088_RS12650;product=tRNA 5-hydroxyuridine modification protein YegQ;protein_id=WP_078274525.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2469048 2470430 . + . ID=gene-LP088_RS12655;Name=LP088_RS12655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12655;old_locus_tag=LP088_12535 NZ_CP087814.1 Protein Homology CDS 2469048 2470430 . + 0 ID=cds-WP_078274526.1;Parent=gene-LP088_RS12655;Dbxref=Genbank:WP_078274526.1;Name=WP_078274526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003672926.1;locus_tag=LP088_RS12655;product=AAA family ATPase;protein_id=WP_078274526.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2470430 2470960 . + . ID=gene-LP088_RS12660;Name=LP088_RS12660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12660;old_locus_tag=LP088_12540 NZ_CP087814.1 Protein Homology CDS 2470430 2470960 . + 0 ID=cds-WP_078274527.1;Parent=gene-LP088_RS12660;Dbxref=Genbank:WP_078274527.1;Name=WP_078274527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003669239.1;locus_tag=LP088_RS12660;product=hypothetical protein;protein_id=WP_078274527.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2470982 2471290 . + . ID=gene-LP088_RS12665;Name=LP088_RS12665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12665;old_locus_tag=LP088_12545 NZ_CP087814.1 GeneMarkS-2+ CDS 2470982 2471290 . + 0 ID=cds-WP_078274528.1;Parent=gene-LP088_RS12665;Dbxref=Genbank:WP_078274528.1;Name=WP_078274528.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12665;product=hypothetical protein;protein_id=WP_078274528.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2471300 2471728 . + . ID=gene-LP088_RS12670;Name=LP088_RS12670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12670;old_locus_tag=LP088_12550 NZ_CP087814.1 Protein Homology CDS 2471300 2471728 . + 0 ID=cds-WP_078274529.1;Parent=gene-LP088_RS12670;Dbxref=Genbank:WP_078274529.1;Name=WP_078274529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519410.1;locus_tag=LP088_RS12670;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_078274529.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2471745 2472149 . + . ID=gene-LP088_RS12675;Name=LP088_RS12675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12675;old_locus_tag=LP088_12555 NZ_CP087814.1 Protein Homology CDS 2471745 2472149 . + 0 ID=cds-WP_078274530.1;Parent=gene-LP088_RS12675;Dbxref=Genbank:WP_078274530.1;Name=WP_078274530.1;Ontology_term=GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519409.1;locus_tag=LP088_RS12675;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_078274530.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2472207 2472527 . + . ID=gene-LP088_RS12680;Name=LP088_RS12680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12680;old_locus_tag=LP088_12560 NZ_CP087814.1 Protein Homology CDS 2472207 2472527 . + 0 ID=cds-WP_158079666.1;Parent=gene-LP088_RS12680;Dbxref=Genbank:WP_158079666.1;Name=WP_158079666.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025496.2;locus_tag=LP088_RS12680;product=DUF4298 domain-containing protein;protein_id=WP_158079666.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2472527 2472784 . + . ID=gene-LP088_RS12685;Name=LP088_RS12685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12685;old_locus_tag=LP088_12565 NZ_CP087814.1 Protein Homology CDS 2472527 2472784 . + 0 ID=cds-WP_078274532.1;Parent=gene-LP088_RS12685;Dbxref=Genbank:WP_078274532.1;Name=WP_078274532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519407.1;locus_tag=LP088_RS12685;product=YfhL family 4Fe-4S dicluster ferredoxin;protein_id=WP_078274532.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2472807 2474309 . - . ID=gene-LP088_RS12690;Name=LP088_RS12690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12690;old_locus_tag=LP088_12570 NZ_CP087814.1 Protein Homology CDS 2472807 2474309 . - 0 ID=cds-WP_078274533.1;Parent=gene-LP088_RS12690;Dbxref=Genbank:WP_078274533.1;Name=WP_078274533.1;Ontology_term=GO:0008150,GO:0003674,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657724.1;locus_tag=LP088_RS12690;product=YihY family inner membrane protein;protein_id=WP_078274533.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2474476 2474946 . + . ID=gene-LP088_RS12695;Name=LP088_RS12695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12695;old_locus_tag=LP088_12575 NZ_CP087814.1 GeneMarkS-2+ CDS 2474476 2474946 . + 0 ID=cds-WP_078274534.1;Parent=gene-LP088_RS12695;Dbxref=Genbank:WP_078274534.1;Name=WP_078274534.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12695;product=hypothetical protein;protein_id=WP_078274534.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2475019 2476584 . + . ID=gene-LP088_RS12700;Name=LP088_RS12700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12700;old_locus_tag=LP088_12580 NZ_CP087814.1 Protein Homology CDS 2475019 2476584 . + 0 ID=cds-WP_078274535.1;Parent=gene-LP088_RS12700;Dbxref=Genbank:WP_078274535.1;Name=WP_078274535.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF013594.2;locus_tag=LP088_RS12700;product=M48 family metalloprotease;protein_id=WP_078274535.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2476711 2477739 . - . ID=gene-LP088_RS12705;Name=LP088_RS12705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12705;old_locus_tag=LP088_12585 NZ_CP087814.1 Protein Homology CDS 2476711 2477739 . - 0 ID=cds-WP_264676001.1;Parent=gene-LP088_RS12705;Dbxref=Genbank:WP_264676001.1;Name=WP_264676001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009502077.1;locus_tag=LP088_RS12705;product=low specificity L-threonine aldolase;protein_id=WP_264676001.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2477736 2478182 . - . ID=gene-LP088_RS12710;Name=LP088_RS12710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12710;old_locus_tag=LP088_12590 NZ_CP087814.1 Protein Homology CDS 2477736 2478182 . - 0 ID=cds-WP_078274537.1;Parent=gene-LP088_RS12710;Dbxref=Genbank:WP_078274537.1;Name=WP_078274537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003673648.1;locus_tag=LP088_RS12710;product=GatB/YqeY domain-containing protein;protein_id=WP_078274537.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2478328 2479572 . + . ID=gene-LP088_RS12715;Name=LP088_RS12715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12715;old_locus_tag=LP088_12595 NZ_CP087814.1 Protein Homology CDS 2478328 2479572 . + 0 ID=cds-WP_112741746.1;Parent=gene-LP088_RS12715;Dbxref=Genbank:WP_112741746.1;Name=WP_112741746.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017019.2;locus_tag=LP088_RS12715;product=DUF711 family protein;protein_id=WP_112741746.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2479762 2480592 . - . ID=gene-LP088_RS12720;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=LP088_RS12720;old_locus_tag=LP088_12600 NZ_CP087814.1 Protein Homology CDS 2479762 2480592 . - 0 ID=cds-WP_112741745.1;Parent=gene-LP088_RS12720;Dbxref=Genbank:WP_112741745.1;Name=WP_112741745.1;Ontology_term=GO:0000451,GO:0008649,GO:0008757;gbkey=CDS;gene=rsmI;go_function=rRNA methyltransferase activity|0008649||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=rRNA 2'-O-methylation|0000451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519819.1;locus_tag=LP088_RS12720;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_112741745.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2480674 2481378 . - . ID=gene-LP088_RS12725;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=LP088_RS12725;old_locus_tag=LP088_12605 NZ_CP087814.1 Protein Homology CDS 2480674 2481378 . - 0 ID=cds-WP_228157752.1;Parent=gene-LP088_RS12725;Dbxref=Genbank:WP_228157752.1;Name=WP_228157752.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005013008.1;locus_tag=LP088_RS12725;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_228157752.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2481584 2481880 . + . ID=gene-LP088_RS12730;Name=LP088_RS12730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12730;old_locus_tag=LP088_12610 NZ_CP087814.1 Protein Homology CDS 2481584 2481880 . + 0 ID=cds-WP_078274539.1;Parent=gene-LP088_RS12730;Dbxref=Genbank:WP_078274539.1;Name=WP_078274539.1;Ontology_term=GO:0009055,GO:0020037;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010195760.1;locus_tag=LP088_RS12730;product=c-type cytochrome;protein_id=WP_078274539.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2482174 2482866 . + . ID=gene-LP088_RS12735;Name=LP088_RS12735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12735;old_locus_tag=LP088_12615 NZ_CP087814.1 Protein Homology CDS 2482174 2482866 . + 0 ID=cds-WP_078274545.1;Parent=gene-LP088_RS12735;Dbxref=Genbank:WP_078274545.1;Name=WP_078274545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657615.1;locus_tag=LP088_RS12735;product=cytochrome c4;protein_id=WP_078274545.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2482990 2484084 . + . ID=gene-LP088_RS12740;Name=LP088_RS12740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12740;old_locus_tag=LP088_12620 NZ_CP087814.1 Protein Homology CDS 2482990 2484084 . + 0 ID=cds-WP_264676002.1;Parent=gene-LP088_RS12740;Dbxref=Genbank:WP_264676002.1;Name=WP_264676002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003665684.1;locus_tag=LP088_RS12740;product=hypothetical protein;protein_id=WP_264676002.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2484072 2484419 . + . ID=gene-LP088_RS12745;Name=LP088_RS12745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12745;old_locus_tag=LP088_12625 NZ_CP087814.1 Protein Homology CDS 2484072 2484419 . + 0 ID=cds-WP_264676003.1;Parent=gene-LP088_RS12745;Dbxref=Genbank:WP_264676003.1;Name=WP_264676003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007395549.1;locus_tag=LP088_RS12745;product=RnfH family protein;protein_id=WP_264676003.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2484722 2485105 . - . ID=gene-LP088_RS12750;Name=bamE;gbkey=Gene;gene=bamE;gene_biotype=protein_coding;locus_tag=LP088_RS12750;old_locus_tag=LP088_12630 NZ_CP087814.1 Protein Homology CDS 2484722 2485105 . - 0 ID=cds-WP_264676004.1;Parent=gene-LP088_RS12750;Dbxref=Genbank:WP_264676004.1;Name=WP_264676004.1;Ontology_term=GO:0019867;gbkey=CDS;gene=bamE;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003671332.1;locus_tag=LP088_RS12750;product=outer membrane protein assembly factor BamE;protein_id=WP_264676004.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2485156 2486115 . + . ID=gene-LP088_RS12755;Name=LP088_RS12755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12755;old_locus_tag=LP088_12635 NZ_CP087814.1 Protein Homology CDS 2485156 2486115 . + 0 ID=cds-WP_264676005.1;Parent=gene-LP088_RS12755;Dbxref=Genbank:WP_264676005.1;Name=WP_264676005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003669865.1;locus_tag=LP088_RS12755;product=DUF3025 domain-containing protein;protein_id=WP_264676005.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2486196 2486642 . + . ID=gene-LP088_RS12760;Name=LP088_RS12760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12760;old_locus_tag=LP088_12640 NZ_CP087814.1 GeneMarkS-2+ CDS 2486196 2486642 . + 0 ID=cds-WP_078273017.1;Parent=gene-LP088_RS12760;Dbxref=Genbank:WP_078273017.1;Name=WP_078273017.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12760;product=hypothetical protein;protein_id=WP_078273017.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2487053 2488393 . + . ID=gene-LP088_RS12765;Name=LP088_RS12765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12765;old_locus_tag=LP088_12645 NZ_CP087814.1 Protein Homology CDS 2487053 2488393 . + 0 ID=cds-WP_078273016.1;Parent=gene-LP088_RS12765;Dbxref=Genbank:WP_078273016.1;Name=WP_078273016.1;Ontology_term=GO:0006814,GO:0016655;gbkey=CDS;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657766.1;locus_tag=LP088_RS12765;product=Na(+)-translocating NADH-quinone reductase subunit A;protein_id=WP_078273016.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2488397 2489647 . + . ID=gene-LP088_RS12770;Name=LP088_RS12770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12770;old_locus_tag=LP088_12650 NZ_CP087814.1 Protein Homology CDS 2488397 2489647 . + 0 ID=cds-WP_078273015.1;Parent=gene-LP088_RS12770;Dbxref=Genbank:WP_078273015.1;Name=WP_078273015.1;Ontology_term=GO:0022904,GO:0055085,GO:0010181,GO:0016655,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=FMN binding|0010181||IEA,oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=respiratory electron transport chain|0022904||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003658466.1;locus_tag=LP088_RS12770;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit B;protein_id=WP_078273015.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2489631 2490437 . + . ID=gene-LP088_RS12775;Name=LP088_RS12775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12775;old_locus_tag=LP088_12655 NZ_CP087814.1 Protein Homology CDS 2489631 2490437 . + 0 ID=cds-WP_078273014.1;Parent=gene-LP088_RS12775;Dbxref=Genbank:WP_078273014.1;Name=WP_078273014.1;Ontology_term=GO:0006814,GO:0010181,GO:0016655,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=FMN binding|0010181||IEA,oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003669813.1;locus_tag=LP088_RS12775;product=Na(+)-translocating NADH-quinone reductase subunit C;protein_id=WP_078273014.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2490440 2491099 . + . ID=gene-LP088_RS12780;Name=LP088_RS12780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12780;old_locus_tag=LP088_12660 NZ_CP087814.1 Protein Homology CDS 2490440 2491099 . + 0 ID=cds-WP_029103012.1;Parent=gene-LP088_RS12780;Dbxref=Genbank:WP_029103012.1;Name=WP_029103012.1;Ontology_term=GO:0016655,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010197301.1;locus_tag=LP088_RS12780;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit D;protein_id=WP_029103012.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2491099 2491707 . + . ID=gene-LP088_RS12785;Name=nqrE;gbkey=Gene;gene=nqrE;gene_biotype=protein_coding;locus_tag=LP088_RS12785;old_locus_tag=LP088_12665 NZ_CP087814.1 Protein Homology CDS 2491099 2491707 . + 0 ID=cds-WP_029103013.1;Parent=gene-LP088_RS12785;Dbxref=Genbank:WP_029103013.1;Name=WP_029103013.1;Ontology_term=GO:0006814,GO:0016655;gbkey=CDS;gene=nqrE;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657760.1;locus_tag=LP088_RS12785;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit E;protein_id=WP_029103013.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2491717 2492949 . + . ID=gene-LP088_RS12790;Name=nqrF;gbkey=Gene;gene=nqrF;gene_biotype=protein_coding;locus_tag=LP088_RS12790;old_locus_tag=LP088_12670 NZ_CP087814.1 Protein Homology CDS 2491717 2492949 . + 0 ID=cds-WP_112741744.1;Parent=gene-LP088_RS12790;Dbxref=Genbank:WP_112741744.1;Name=WP_112741744.1;Ontology_term=GO:0006814,GO:0016655;gbkey=CDS;gene=nqrF;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019673781.1;locus_tag=LP088_RS12790;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit F;protein_id=WP_112741744.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2493374 2508502 . - . ID=gene-LP088_RS12795;Name=LP088_RS12795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12795;old_locus_tag=LP088_12675 NZ_CP087814.1 Protein Homology CDS 2493374 2508502 . - 0 ID=cds-WP_264690332.1;Parent=gene-LP088_RS12795;Dbxref=Genbank:WP_264690332.1;Name=WP_264690332.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014600.2;locus_tag=LP088_RS12795;product=M15 family metallopeptidase;protein_id=WP_264690332.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2508725 2509918 . + . ID=gene-LP088_RS12800;Name=LP088_RS12800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12800 NZ_CP087814.1 GeneMarkS-2+ CDS 2508725 2509918 . + 0 ID=cds-WP_264690333.1;Parent=gene-LP088_RS12800;Dbxref=Genbank:WP_264690333.1;Name=WP_264690333.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12800;product=hypothetical protein;protein_id=WP_264690333.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2510155 2512125 . - . ID=gene-LP088_RS12805;Name=LP088_RS12805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12805;old_locus_tag=LP088_12685 NZ_CP087814.1 GeneMarkS-2+ CDS 2510155 2512125 . - 0 ID=cds-WP_264690334.1;Parent=gene-LP088_RS12805;Dbxref=Genbank:WP_264690334.1;Name=WP_264690334.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12805;product=hypothetical protein;protein_id=WP_264690334.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2512138 2512638 . - . ID=gene-LP088_RS12810;Name=LP088_RS12810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12810;old_locus_tag=LP088_12690 NZ_CP087814.1 GeneMarkS-2+ CDS 2512138 2512638 . - 0 ID=cds-WP_264690335.1;Parent=gene-LP088_RS12810;Dbxref=Genbank:WP_264690335.1;Name=WP_264690335.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12810;product=hypothetical protein;protein_id=WP_264690335.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2512646 2515099 . - . ID=gene-LP088_RS12815;Name=LP088_RS12815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12815;old_locus_tag=LP088_12695 NZ_CP087814.1 GeneMarkS-2+ CDS 2512646 2515099 . - 0 ID=cds-WP_264690336.1;Parent=gene-LP088_RS12815;Dbxref=Genbank:WP_264690336.1;Name=WP_264690336.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12815;product=hypothetical protein;protein_id=WP_264690336.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2515099 2516019 . - . ID=gene-LP088_RS12820;Name=LP088_RS12820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12820;old_locus_tag=LP088_12700 NZ_CP087814.1 GeneMarkS-2+ CDS 2515099 2516019 . - 0 ID=cds-WP_264690337.1;Parent=gene-LP088_RS12820;Dbxref=Genbank:WP_264690337.1;Name=WP_264690337.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12820;product=hypothetical protein;protein_id=WP_264690337.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2516082 2516591 . - . ID=gene-LP088_RS12825;Name=LP088_RS12825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12825;old_locus_tag=LP088_12705 NZ_CP087814.1 GeneMarkS-2+ CDS 2516082 2516591 . - 0 ID=cds-WP_264690338.1;Parent=gene-LP088_RS12825;Dbxref=Genbank:WP_264690338.1;Name=WP_264690338.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12825;product=hypothetical protein;protein_id=WP_264690338.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2516652 2517809 . - . ID=gene-LP088_RS12830;Name=LP088_RS12830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12830;old_locus_tag=LP088_12710 NZ_CP087814.1 Protein Homology CDS 2516652 2517809 . - 0 ID=cds-WP_264690339.1;Parent=gene-LP088_RS12830;Dbxref=Genbank:WP_264690339.1;Name=WP_264690339.1;Ontology_term=GO:0019028;gbkey=CDS;go_component=viral capsid|0019028||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003667915.1;locus_tag=LP088_RS12830;product=N4-gp56 family major capsid protein;protein_id=WP_264690339.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2517837 2518844 . - . ID=gene-LP088_RS12835;Name=LP088_RS12835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12835;old_locus_tag=LP088_12715 NZ_CP087814.1 GeneMarkS-2+ CDS 2517837 2518844 . - 0 ID=cds-WP_264690340.1;Parent=gene-LP088_RS12835;Dbxref=Genbank:WP_264690340.1;Name=WP_264690340.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12835;product=hypothetical protein;protein_id=WP_264690340.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2518837 2519163 . - . ID=gene-LP088_RS12840;Name=LP088_RS12840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12840;old_locus_tag=LP088_12720 NZ_CP087814.1 GeneMarkS-2+ CDS 2518837 2519163 . - 0 ID=cds-WP_264690341.1;Parent=gene-LP088_RS12840;Dbxref=Genbank:WP_264690341.1;Name=WP_264690341.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12840;product=hypothetical protein;protein_id=WP_264690341.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2519160 2521490 . - . ID=gene-LP088_RS12845;Name=LP088_RS12845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12845;old_locus_tag=LP088_12725 NZ_CP087814.1 Protein Homology CDS 2519160 2521490 . - 0 ID=cds-WP_264690342.1;Parent=gene-LP088_RS12845;Dbxref=Genbank:WP_264690342.1;Name=WP_264690342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003667910.1;locus_tag=LP088_RS12845;product=poly(3-hydroxybutyrate) depolymerase;protein_id=WP_264690342.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2521490 2522113 . - . ID=gene-LP088_RS12850;Name=LP088_RS12850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12850;old_locus_tag=LP088_12730 NZ_CP087814.1 GeneMarkS-2+ CDS 2521490 2522113 . - 0 ID=cds-WP_264690343.1;Parent=gene-LP088_RS12850;Dbxref=Genbank:WP_264690343.1;Name=WP_264690343.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12850;product=hypothetical protein;protein_id=WP_264690343.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2522122 2523735 . - . ID=gene-LP088_RS12855;Name=LP088_RS12855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12855;old_locus_tag=LP088_12735 NZ_CP087814.1 Protein Homology CDS 2522122 2523735 . - 0 ID=cds-WP_264690344.1;Parent=gene-LP088_RS12855;Dbxref=Genbank:WP_264690344.1;Name=WP_264690344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009501821.1;locus_tag=LP088_RS12855;product=hypothetical protein;protein_id=WP_264690344.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2523750 2524436 . - . ID=gene-LP088_RS12860;Name=LP088_RS12860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12860;old_locus_tag=LP088_12740 NZ_CP087814.1 Protein Homology CDS 2523750 2524436 . - 0 ID=cds-WP_264690345.1;Parent=gene-LP088_RS12860;Dbxref=Genbank:WP_264690345.1;Name=WP_264690345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009501822.1;locus_tag=LP088_RS12860;product=hypothetical protein;protein_id=WP_264690345.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2525127 2525609 . + . ID=gene-LP088_RS12865;Name=LP088_RS12865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12865;old_locus_tag=LP088_12745 NZ_CP087814.1 GeneMarkS-2+ CDS 2525127 2525609 . + 0 ID=cds-WP_264690346.1;Parent=gene-LP088_RS12865;Dbxref=Genbank:WP_264690346.1;Name=WP_264690346.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12865;product=hypothetical protein;protein_id=WP_264690346.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2525737 2525907 . - . ID=gene-LP088_RS12870;Name=LP088_RS12870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12870;old_locus_tag=LP088_12750 NZ_CP087814.1 GeneMarkS-2+ CDS 2525737 2525907 . - 0 ID=cds-WP_264690347.1;Parent=gene-LP088_RS12870;Dbxref=Genbank:WP_264690347.1;Name=WP_264690347.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12870;product=hypothetical protein;protein_id=WP_264690347.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2525882 2526142 . - . ID=gene-LP088_RS12875;Name=LP088_RS12875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12875;old_locus_tag=LP088_12755 NZ_CP087814.1 GeneMarkS-2+ CDS 2525882 2526142 . - 0 ID=cds-WP_264690348.1;Parent=gene-LP088_RS12875;Dbxref=Genbank:WP_264690348.1;Name=WP_264690348.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12875;product=hypothetical protein;protein_id=WP_264690348.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2526932 2527183 . + . ID=gene-LP088_RS12880;Name=LP088_RS12880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12880;old_locus_tag=LP088_12760 NZ_CP087814.1 GeneMarkS-2+ CDS 2526932 2527183 . + 0 ID=cds-WP_264690349.1;Parent=gene-LP088_RS12880;Dbxref=Genbank:WP_264690349.1;Name=WP_264690349.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12880;product=hypothetical protein;protein_id=WP_264690349.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2527554 2528441 . + . ID=gene-LP088_RS12885;Name=LP088_RS12885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12885;old_locus_tag=LP088_12765 NZ_CP087814.1 GeneMarkS-2+ CDS 2527554 2528441 . + 0 ID=cds-WP_264690351.1;Parent=gene-LP088_RS12885;Dbxref=Genbank:WP_264690351.1;Name=WP_264690351.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12885;product=hypothetical protein;protein_id=WP_264690351.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2528616 2528825 . + . ID=gene-LP088_RS12890;Name=LP088_RS12890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12890;old_locus_tag=LP088_12770 NZ_CP087814.1 GeneMarkS-2+ CDS 2528616 2528825 . + 0 ID=cds-WP_264690352.1;Parent=gene-LP088_RS12890;Dbxref=Genbank:WP_264690352.1;Name=WP_264690352.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12890;product=hypothetical protein;protein_id=WP_264690352.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2528944 2529210 . + . ID=gene-LP088_RS12895;Name=LP088_RS12895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12895;old_locus_tag=LP088_12775 NZ_CP087814.1 GeneMarkS-2+ CDS 2528944 2529210 . + 0 ID=cds-WP_264690353.1;Parent=gene-LP088_RS12895;Dbxref=Genbank:WP_264690353.1;Name=WP_264690353.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12895;product=hypothetical protein;protein_id=WP_264690353.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2529287 2530474 . + . ID=gene-LP088_RS12900;Name=LP088_RS12900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12900;old_locus_tag=LP088_12780 NZ_CP087814.1 Protein Homology CDS 2529287 2530474 . + 0 ID=cds-WP_264690354.1;Parent=gene-LP088_RS12900;Dbxref=Genbank:WP_264690354.1;Name=WP_264690354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003672472.1;locus_tag=LP088_RS12900;product=hypothetical protein;protein_id=WP_264690354.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2530723 2530890 . + . ID=gene-LP088_RS12905;Name=LP088_RS12905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12905;old_locus_tag=LP088_12785 NZ_CP087814.1 GeneMarkS-2+ CDS 2530723 2530890 . + 0 ID=cds-WP_264690355.1;Parent=gene-LP088_RS12905;Dbxref=Genbank:WP_264690355.1;Name=WP_264690355.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12905;product=hypothetical protein;protein_id=WP_264690355.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2530859 2531098 . + . ID=gene-LP088_RS12910;Name=LP088_RS12910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12910;old_locus_tag=LP088_12790 NZ_CP087814.1 Protein Homology CDS 2530859 2531098 . + 0 ID=cds-WP_264690356.1;Parent=gene-LP088_RS12910;Dbxref=Genbank:WP_264690356.1;Name=WP_264690356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009501827.1;locus_tag=LP088_RS12910;product=hypothetical protein;protein_id=WP_264690356.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2531095 2531487 . + . ID=gene-LP088_RS12915;Name=LP088_RS12915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12915;old_locus_tag=LP088_12795 NZ_CP087814.1 GeneMarkS-2+ CDS 2531095 2531487 . + 0 ID=cds-WP_264690357.1;Parent=gene-LP088_RS12915;Dbxref=Genbank:WP_264690357.1;Name=WP_264690357.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12915;product=hypothetical protein;protein_id=WP_264690357.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2531471 2531794 . + . ID=gene-LP088_RS12920;Name=LP088_RS12920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12920;old_locus_tag=LP088_12800 NZ_CP087814.1 GeneMarkS-2+ CDS 2531471 2531794 . + 0 ID=cds-WP_264690358.1;Parent=gene-LP088_RS12920;Dbxref=Genbank:WP_264690358.1;Name=WP_264690358.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12920;product=hypothetical protein;protein_id=WP_264690358.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2531800 2532822 . + . ID=gene-LP088_RS12925;Name=LP088_RS12925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12925;old_locus_tag=LP088_12805 NZ_CP087814.1 Protein Homology CDS 2531800 2532822 . + 0 ID=cds-WP_264690359.1;Parent=gene-LP088_RS12925;Dbxref=Genbank:WP_264690359.1;Name=WP_264690359.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003672479.1;locus_tag=LP088_RS12925;product=AAA family ATPase;protein_id=WP_264690359.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2532803 2533906 . + . ID=gene-LP088_RS12930;Name=LP088_RS12930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12930;old_locus_tag=LP088_12810 NZ_CP087814.1 Protein Homology CDS 2532803 2533906 . + 0 ID=cds-WP_264690360.1;Parent=gene-LP088_RS12930;Dbxref=Genbank:WP_264690360.1;Name=WP_264690360.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021484.2;locus_tag=LP088_RS12930;product=VWA-like domain-containing protein;protein_id=WP_264690360.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2533909 2535060 . + . ID=gene-LP088_RS12935;Name=LP088_RS12935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12935;old_locus_tag=LP088_12815 NZ_CP087814.1 Protein Homology CDS 2533909 2535060 . + 0 ID=cds-WP_264690361.1;Parent=gene-LP088_RS12935;Dbxref=Genbank:WP_264690361.1;Name=WP_264690361.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024991.2;locus_tag=LP088_RS12935;product=AAA family ATPase;protein_id=WP_264690361.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2535057 2535338 . + . ID=gene-LP088_RS12940;Name=LP088_RS12940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12940;old_locus_tag=LP088_12820 NZ_CP087814.1 GeneMarkS-2+ CDS 2535057 2535338 . + 0 ID=cds-WP_264690362.1;Parent=gene-LP088_RS12940;Dbxref=Genbank:WP_264690362.1;Name=WP_264690362.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12940;product=hypothetical protein;protein_id=WP_264690362.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2535335 2535640 . + . ID=gene-LP088_RS12945;Name=LP088_RS12945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12945;old_locus_tag=LP088_12825 NZ_CP087814.1 GeneMarkS-2+ CDS 2535335 2535640 . + 0 ID=cds-WP_264690363.1;Parent=gene-LP088_RS12945;Dbxref=Genbank:WP_264690363.1;Name=WP_264690363.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12945;product=hypothetical protein;protein_id=WP_264690363.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2535637 2535939 . + . ID=gene-LP088_RS12950;Name=LP088_RS12950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12950;old_locus_tag=LP088_12830 NZ_CP087814.1 GeneMarkS-2+ CDS 2535637 2535939 . + 0 ID=cds-WP_264690364.1;Parent=gene-LP088_RS12950;Dbxref=Genbank:WP_264690364.1;Name=WP_264690364.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12950;product=hypothetical protein;protein_id=WP_264690364.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2535936 2538404 . + . ID=gene-LP088_RS12955;Name=LP088_RS12955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12955;old_locus_tag=LP088_12835 NZ_CP087814.1 Protein Homology CDS 2535936 2538404 . + 0 ID=cds-WP_264690365.1;Parent=gene-LP088_RS12955;Dbxref=Genbank:WP_264690365.1;Name=WP_264690365.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004716566.1;locus_tag=LP088_RS12955;product=DNA polymerase;protein_id=WP_264690365.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2538455 2538679 . + . ID=gene-LP088_RS12960;Name=LP088_RS12960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12960;old_locus_tag=LP088_12840 NZ_CP087814.1 GeneMarkS-2+ CDS 2538455 2538679 . + 0 ID=cds-WP_264690366.1;Parent=gene-LP088_RS12960;Dbxref=Genbank:WP_264690366.1;Name=WP_264690366.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12960;product=DUF1317 family protein;protein_id=WP_264690366.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2538676 2539251 . + . ID=gene-LP088_RS12965;Name=LP088_RS12965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12965;old_locus_tag=LP088_12845 NZ_CP087814.1 Protein Homology CDS 2538676 2539251 . + 0 ID=cds-WP_264690367.1;Parent=gene-LP088_RS12965;Dbxref=Genbank:WP_264690367.1;Name=WP_264690367.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF012514.2;locus_tag=LP088_RS12965;product=NUDIX domain-containing protein;protein_id=WP_264690367.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2539263 2539850 . - . ID=gene-LP088_RS12970;Name=LP088_RS12970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12970;old_locus_tag=LP088_12850 NZ_CP087814.1 Protein Homology CDS 2539263 2539850 . - 0 ID=cds-WP_264690368.1;Parent=gene-LP088_RS12970;Dbxref=Genbank:WP_264690368.1;Name=WP_264690368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004648497.1;locus_tag=LP088_RS12970;product=N-acetylmuramidase family protein;protein_id=WP_264690368.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2539831 2540058 . - . ID=gene-LP088_RS12975;Name=LP088_RS12975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12975;old_locus_tag=LP088_12855 NZ_CP087814.1 Protein Homology CDS 2539831 2540058 . - 0 ID=cds-WP_264690369.1;Parent=gene-LP088_RS12975;Dbxref=Genbank:WP_264690369.1;Name=WP_264690369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003652880.1;locus_tag=LP088_RS12975;product=hypothetical protein;protein_id=WP_264690369.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2540039 2540389 . - . ID=gene-LP088_RS12980;Name=LP088_RS12980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12980;old_locus_tag=LP088_12860 NZ_CP087814.1 GeneMarkS-2+ CDS 2540039 2540389 . - 0 ID=cds-WP_264690370.1;Parent=gene-LP088_RS12980;Dbxref=Genbank:WP_264690370.1;Name=WP_264690370.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12980;product=hypothetical protein;protein_id=WP_264690370.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2540396 2541421 . - . ID=gene-LP088_RS12985;Name=LP088_RS12985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12985;old_locus_tag=LP088_12865 NZ_CP087814.1 GeneMarkS-2+ CDS 2540396 2541421 . - 0 ID=cds-WP_264690371.1;Parent=gene-LP088_RS12985;Dbxref=Genbank:WP_264690371.1;Name=WP_264690371.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12985;product=hypothetical protein;protein_id=WP_264690371.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2541784 2542029 . + . ID=gene-LP088_RS12990;Name=LP088_RS12990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12990;old_locus_tag=LP088_12870 NZ_CP087814.1 GeneMarkS-2+ CDS 2541784 2542029 . + 0 ID=cds-WP_264690372.1;Parent=gene-LP088_RS12990;Dbxref=Genbank:WP_264690372.1;Name=WP_264690372.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12990;product=hypothetical protein;protein_id=WP_264690372.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2542336 2542572 . + . ID=gene-LP088_RS12995;Name=LP088_RS12995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS12995;old_locus_tag=LP088_12875 NZ_CP087814.1 GeneMarkS-2+ CDS 2542336 2542572 . + 0 ID=cds-WP_264690373.1;Parent=gene-LP088_RS12995;Dbxref=Genbank:WP_264690373.1;Name=WP_264690373.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS12995;product=hypothetical protein;protein_id=WP_264690373.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2542556 2542987 . + . ID=gene-LP088_RS13000;Name=LP088_RS13000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13000;old_locus_tag=LP088_12880 NZ_CP087814.1 GeneMarkS-2+ CDS 2542556 2542987 . + 0 ID=cds-WP_264690374.1;Parent=gene-LP088_RS13000;Dbxref=Genbank:WP_264690374.1;Name=WP_264690374.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS13000;product=hypothetical protein;protein_id=WP_264690374.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2543029 2543349 . + . ID=gene-LP088_RS13005;Name=LP088_RS13005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13005;old_locus_tag=LP088_12885 NZ_CP087814.1 Protein Homology CDS 2543029 2543349 . + 0 ID=cds-WP_264690375.1;Parent=gene-LP088_RS13005;Dbxref=Genbank:WP_264690375.1;Name=WP_264690375.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016343.2;locus_tag=LP088_RS13005;product=DUF551 domain-containing protein;protein_id=WP_264690375.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2543501 2544466 . + . ID=gene-LP088_RS13010;Name=LP088_RS13010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13010;old_locus_tag=LP088_12890 NZ_CP087814.1 Protein Homology CDS 2543501 2544466 . + 0 ID=cds-WP_264690376.1;Parent=gene-LP088_RS13010;Dbxref=Genbank:WP_264690376.1;Name=WP_264690376.1;Ontology_term=GO:0006231,GO:0050660,GO:0050797;gbkey=CDS;go_function=flavin adenine dinucleotide binding|0050660||IEA,thymidylate synthase (FAD) activity|0050797||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001197364.1;locus_tag=LP088_RS13010;product=FAD-dependent thymidylate synthase;protein_id=WP_264690376.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2544682 2545155 . + . ID=gene-LP088_RS13015;Name=LP088_RS13015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13015;old_locus_tag=LP088_12895 NZ_CP087814.1 GeneMarkS-2+ CDS 2544682 2545155 . + 0 ID=cds-WP_264690377.1;Parent=gene-LP088_RS13015;Dbxref=Genbank:WP_264690377.1;Name=WP_264690377.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS13015;product=hypothetical protein;protein_id=WP_264690377.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2545148 2545789 . + . ID=gene-LP088_RS13020;Name=LP088_RS13020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13020;old_locus_tag=LP088_12900 NZ_CP087814.1 GeneMarkS-2+ CDS 2545148 2545789 . + 0 ID=cds-WP_264690378.1;Parent=gene-LP088_RS13020;Dbxref=Genbank:WP_264690378.1;Name=WP_264690378.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS13020;product=hypothetical protein;protein_id=WP_264690378.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2545996 2546250 . + . ID=gene-LP088_RS13025;Name=LP088_RS13025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13025;old_locus_tag=LP088_12905 NZ_CP087814.1 GeneMarkS-2+ CDS 2545996 2546250 . + 0 ID=cds-WP_264690379.1;Parent=gene-LP088_RS13025;Dbxref=Genbank:WP_264690379.1;Name=WP_264690379.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS13025;product=hypothetical protein;protein_id=WP_264690379.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2546475 2546720 . + . ID=gene-LP088_RS13030;Name=LP088_RS13030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13030;old_locus_tag=LP088_12910 NZ_CP087814.1 GeneMarkS-2+ CDS 2546475 2546720 . + 0 ID=cds-WP_264690380.1;Parent=gene-LP088_RS13030;Dbxref=Genbank:WP_264690380.1;Name=WP_264690380.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS13030;product=hypothetical protein;protein_id=WP_264690380.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2546749 2547054 . + . ID=gene-LP088_RS13035;Name=LP088_RS13035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13035;old_locus_tag=LP088_12915 NZ_CP087814.1 GeneMarkS-2+ CDS 2546749 2547054 . + 0 ID=cds-WP_264690381.1;Parent=gene-LP088_RS13035;Dbxref=Genbank:WP_264690381.1;Name=WP_264690381.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS13035;product=hypothetical protein;protein_id=WP_264690381.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2547063 2547314 . + . ID=gene-LP088_RS13040;Name=LP088_RS13040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13040;old_locus_tag=LP088_12920 NZ_CP087814.1 Protein Homology CDS 2547063 2547314 . + 0 ID=cds-WP_264690382.1;Parent=gene-LP088_RS13040;Dbxref=Genbank:WP_264690382.1;Name=WP_264690382.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040395.1;locus_tag=LP088_RS13040;product=DUF6378 domain-containing protein;protein_id=WP_264690382.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2547438 2548646 . + . ID=gene-LP088_RS13045;Name=LP088_RS13045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13045;old_locus_tag=LP088_12925 NZ_CP087814.1 GeneMarkS-2+ CDS 2547438 2548646 . + 0 ID=cds-WP_264690383.1;Parent=gene-LP088_RS13045;Dbxref=Genbank:WP_264690383.1;Name=WP_264690383.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS13045;product=hypothetical protein;protein_id=WP_264690383.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2548706 2549665 . + . ID=gene-LP088_RS13050;Name=LP088_RS13050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13050;old_locus_tag=LP088_12930 NZ_CP087814.1 Protein Homology CDS 2548706 2549665 . + 0 ID=cds-WP_264690384.1;Parent=gene-LP088_RS13050;Dbxref=Genbank:WP_264690384.1;Name=WP_264690384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003672499.1;locus_tag=LP088_RS13050;product=hypothetical protein;protein_id=WP_264690384.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2549662 2549886 . + . ID=gene-LP088_RS13055;Name=LP088_RS13055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13055;old_locus_tag=LP088_12935 NZ_CP087814.1 GeneMarkS-2+ CDS 2549662 2549886 . + 0 ID=cds-WP_264690385.1;Parent=gene-LP088_RS13055;Dbxref=Genbank:WP_264690385.1;Name=WP_264690385.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS13055;product=hypothetical protein;protein_id=WP_264690385.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2549986 2550174 . + . ID=gene-LP088_RS13060;Name=LP088_RS13060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13060;old_locus_tag=LP088_12940 NZ_CP087814.1 GeneMarkS-2+ CDS 2549986 2550174 . + 0 ID=cds-WP_264690386.1;Parent=gene-LP088_RS13060;Dbxref=Genbank:WP_264690386.1;Name=WP_264690386.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS13060;product=hypothetical protein;protein_id=WP_264690386.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2550272 2552416 . + . ID=gene-LP088_RS13065;Name=LP088_RS13065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13065;old_locus_tag=LP088_12945 NZ_CP087814.1 Protein Homology CDS 2550272 2552416 . + 0 ID=cds-WP_264690387.1;Parent=gene-LP088_RS13065;Dbxref=Genbank:WP_264690387.1;Name=WP_264690387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004716433.1;locus_tag=LP088_RS13065;product=DUF3987 domain-containing protein;protein_id=WP_264690387.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2552480 2553214 . + . ID=gene-LP088_RS13070;Name=LP088_RS13070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13070;old_locus_tag=LP088_12950 NZ_CP087814.1 Protein Homology CDS 2552480 2553214 . + 0 ID=cds-WP_264690388.1;Parent=gene-LP088_RS13070;Dbxref=Genbank:WP_264690388.1;Name=WP_264690388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009501829.1;locus_tag=LP088_RS13070;product=ATP-binding protein;protein_id=WP_264690388.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2553201 2553698 . + . ID=gene-LP088_RS13075;Name=LP088_RS13075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13075;old_locus_tag=LP088_12955 NZ_CP087814.1 Protein Homology CDS 2553201 2553698 . + 0 ID=cds-WP_264690389.1;Parent=gene-LP088_RS13075;Dbxref=Genbank:WP_264690389.1;Name=WP_264690389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003672508.1;locus_tag=LP088_RS13075;product=HNH endonuclease;protein_id=WP_264690389.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2553695 2554414 . + . ID=gene-LP088_RS13080;Name=LP088_RS13080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13080;old_locus_tag=LP088_12960 NZ_CP087814.1 GeneMarkS-2+ CDS 2553695 2554414 . + 0 ID=cds-WP_264690390.1;Parent=gene-LP088_RS13080;Dbxref=Genbank:WP_264690390.1;Name=WP_264690390.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS13080;product=hypothetical protein;protein_id=WP_264690390.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2554417 2554617 . + . ID=gene-LP088_RS13085;Name=LP088_RS13085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13085;old_locus_tag=LP088_12965 NZ_CP087814.1 GeneMarkS-2+ CDS 2554417 2554617 . + 0 ID=cds-WP_264690391.1;Parent=gene-LP088_RS13085;Dbxref=Genbank:WP_264690391.1;Name=WP_264690391.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS13085;product=hypothetical protein;protein_id=WP_264690391.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2554610 2555107 . + . ID=gene-LP088_RS13090;Name=LP088_RS13090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13090;old_locus_tag=LP088_12970 NZ_CP087814.1 GeneMarkS-2+ CDS 2554610 2555107 . + 0 ID=cds-WP_264690392.1;Parent=gene-LP088_RS13090;Dbxref=Genbank:WP_264690392.1;Name=WP_264690392.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS13090;product=hypothetical protein;protein_id=WP_264690392.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2555104 2555433 . + . ID=gene-LP088_RS13095;Name=LP088_RS13095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13095;old_locus_tag=LP088_12975 NZ_CP087814.1 GeneMarkS-2+ CDS 2555104 2555433 . + 0 ID=cds-WP_264690393.1;Parent=gene-LP088_RS13095;Dbxref=Genbank:WP_264690393.1;Name=WP_264690393.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS13095;product=hypothetical protein;protein_id=WP_264690393.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2555583 2556464 . + . ID=gene-LP088_RS13100;Name=LP088_RS13100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13100;old_locus_tag=LP088_12980 NZ_CP087814.1 Protein Homology CDS 2555583 2556464 . + 0 ID=cds-WP_264690394.1;Parent=gene-LP088_RS13100;Dbxref=Genbank:WP_264690394.1;Name=WP_264690394.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012798.2;locus_tag=LP088_RS13100;product=site-specific integrase;protein_id=WP_264690394.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2556590 2556757 . + . ID=gene-LP088_RS13105;Name=LP088_RS13105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13105;old_locus_tag=LP088_12985 NZ_CP087814.1 GeneMarkS-2+ CDS 2556590 2556757 . + 0 ID=cds-WP_264690395.1;Parent=gene-LP088_RS13105;Dbxref=Genbank:WP_264690395.1;Name=WP_264690395.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS13105;product=hypothetical protein;protein_id=WP_264690395.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2556754 2556933 . + . ID=gene-LP088_RS13110;Name=LP088_RS13110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13110;old_locus_tag=LP088_12990 NZ_CP087814.1 GeneMarkS-2+ CDS 2556754 2556933 . + 0 ID=cds-WP_264690396.1;Parent=gene-LP088_RS13110;Dbxref=Genbank:WP_264690396.1;Name=WP_264690396.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS13110;product=hypothetical protein;protein_id=WP_264690396.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2557326 2557410 . - . ID=gene-LP088_RS13115;Name=LP088_RS13115;gbkey=Gene;gene_biotype=tRNA;locus_tag=LP088_RS13115;old_locus_tag=LP088_12995 NZ_CP087814.1 tRNAscan-SE tRNA 2557326 2557410 . - . ID=rna-LP088_RS13115;Parent=gene-LP088_RS13115;anticodon=(pos:complement(2557374..2557376));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS13115;product=tRNA-Leu NZ_CP087814.1 tRNAscan-SE exon 2557326 2557410 . - . ID=exon-LP088_RS13115-1;Parent=rna-LP088_RS13115;anticodon=(pos:complement(2557374..2557376));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS13115;product=tRNA-Leu NZ_CP087814.1 RefSeq gene 2557447 2557998 . - . ID=gene-LP088_RS13120;Name=LP088_RS13120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13120;old_locus_tag=LP088_13000 NZ_CP087814.1 GeneMarkS-2+ CDS 2557447 2557998 . - 0 ID=cds-WP_112741743.1;Parent=gene-LP088_RS13120;Dbxref=Genbank:WP_112741743.1;Name=WP_112741743.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS13120;product=hypothetical protein;protein_id=WP_112741743.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2557995 2558144 . - . ID=gene-LP088_RS13125;Name=LP088_RS13125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13125;old_locus_tag=LP088_13005 NZ_CP087814.1 GeneMarkS-2+ CDS 2557995 2558144 . - 0 ID=cds-WP_162860334.1;Parent=gene-LP088_RS13125;Dbxref=Genbank:WP_162860334.1;Name=WP_162860334.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS13125;product=hypothetical protein;protein_id=WP_162860334.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2558314 2559735 . + . ID=gene-LP088_RS13130;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=LP088_RS13130;old_locus_tag=LP088_13010 NZ_CP087814.1 Protein Homology CDS 2558314 2559735 . + 0 ID=cds-WP_078273011.1;Parent=gene-LP088_RS13130;Dbxref=Genbank:WP_078273011.1;Name=WP_078273011.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmD;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201772.1;locus_tag=LP088_RS13130;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_078273011.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2559799 2559960 . - . ID=gene-LP088_RS13135;Name=LP088_RS13135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13135;old_locus_tag=LP088_13015 NZ_CP087814.1 Protein Homology CDS 2559799 2559960 . - 0 ID=cds-WP_264676006.1;Parent=gene-LP088_RS13135;Dbxref=Genbank:WP_264676006.1;Name=WP_264676006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011959669.1;locus_tag=LP088_RS13135;product=MscL family protein;protein_id=WP_264676006.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2560115 2561962 . - . ID=gene-LP088_RS13140;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=LP088_RS13140;old_locus_tag=LP088_13020 NZ_CP087814.1 Protein Homology CDS 2560115 2561962 . - 0 ID=cds-WP_264690398.1;Parent=gene-LP088_RS13140;Dbxref=Genbank:WP_264690398.1;Name=WP_264690398.1;Ontology_term=GO:0006412,GO:0006950,GO:0005525;gbkey=CDS;gene=typA;go_function=GTP binding|0005525||IEA;go_process=translation|0006412||IEA,response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003662680.1;locus_tag=LP088_RS13140;product=translational GTPase TypA;protein_id=WP_264690398.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2562125 2563360 . - . ID=gene-LP088_RS13145;Name=LP088_RS13145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13145;old_locus_tag=LP088_13025 NZ_CP087814.1 Protein Homology CDS 2562125 2563360 . - 0 ID=cds-WP_264676007.1;Parent=gene-LP088_RS13145;Dbxref=Genbank:WP_264676007.1;Name=WP_264676007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003662682.1;locus_tag=LP088_RS13145;product=OmpA family protein;protein_id=WP_264676007.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2563610 2564344 . - . ID=gene-LP088_RS13150;Name=LP088_RS13150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13150;old_locus_tag=LP088_13030 NZ_CP087814.1 Protein Homology CDS 2563610 2564344 . - 0 ID=cds-WP_264676008.1;Parent=gene-LP088_RS13150;Dbxref=Genbank:WP_264676008.1;Name=WP_264676008.1;Ontology_term=GO:0008615,GO:0033856;gbkey=CDS;go_function=pyridoxine 5'-phosphate synthase activity|0033856||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519395.1;locus_tag=LP088_RS13150;product=pyridoxine 5'-phosphate synthase;protein_id=WP_264676008.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2564387 2565817 . - . ID=gene-LP088_RS13155;Name=LP088_RS13155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13155;old_locus_tag=LP088_13035 NZ_CP087814.1 Protein Homology CDS 2564387 2565817 . - 0 ID=cds-WP_264676009.1;Parent=gene-LP088_RS13155;Dbxref=Genbank:WP_264676009.1;Name=WP_264676009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444163.1;locus_tag=LP088_RS13155;product=C13 family peptidase;protein_id=WP_264676009.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2566190 2567101 . + . ID=gene-LP088_RS13160;Name=LP088_RS13160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13160;old_locus_tag=LP088_13040 NZ_CP087814.1 Protein Homology CDS 2566190 2567101 . + 0 ID=cds-WP_078275357.1-8;Parent=gene-LP088_RS13160;Dbxref=Genbank:WP_078275357.1;Name=WP_078275357.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004282326.1;locus_tag=LP088_RS13160;product=IS982 family transposase;protein_id=WP_078275357.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2567359 2567571 . + . ID=gene-LP088_RS13165;Name=ccoS;gbkey=Gene;gene=ccoS;gene_biotype=protein_coding;locus_tag=LP088_RS13165;old_locus_tag=LP088_13045 NZ_CP087814.1 Protein Homology CDS 2567359 2567571 . + 0 ID=cds-WP_036387736.1;Parent=gene-LP088_RS13165;Dbxref=Genbank:WP_036387736.1;Name=WP_036387736.1;Ontology_term=GO:0008535;gbkey=CDS;gene=ccoS;go_process=respiratory chain complex IV assembly|0008535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019518770.1;locus_tag=LP088_RS13165;product=cbb3-type cytochrome oxidase assembly protein CcoS;protein_id=WP_036387736.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2567568 2568404 . + . ID=gene-LP088_RS13170;Name=LP088_RS13170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13170 NZ_CP087814.1 Protein Homology CDS 2567568 2568404 . + 0 ID=cds-WP_078273005.1;Parent=gene-LP088_RS13170;Dbxref=Genbank:WP_078273005.1;Name=WP_078273005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009502067.1;locus_tag=LP088_RS13170;product=sulfite exporter TauE/SafE family protein;protein_id=WP_078273005.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2568631 2569518 . + . ID=gene-LP088_RS13175;Name=LP088_RS13175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13175;old_locus_tag=LP088_13060 NZ_CP087814.1 Protein Homology CDS 2568631 2569518 . + 0 ID=cds-WP_078273004.1;Parent=gene-LP088_RS13175;Dbxref=Genbank:WP_078273004.1;Name=WP_078273004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003662705.1;locus_tag=LP088_RS13175;product=LysR family transcriptional regulator;protein_id=WP_078273004.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2569600 2569935 . + . ID=gene-LP088_RS13180;Name=LP088_RS13180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13180 NZ_CP087814.1 Protein Homology CDS 2569600 2569935 . + 0 ID=cds-WP_208624060.1;Parent=gene-LP088_RS13180;Dbxref=Genbank:WP_208624060.1;Name=WP_208624060.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017496.2;locus_tag=LP088_RS13180;product=Uma2 family endonuclease;protein_id=WP_208624060.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2569922 2570188 . + . ID=gene-LP088_RS13185;Name=LP088_RS13185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13185 NZ_CP087814.1 Protein Homology CDS 2569922 2570188 . + 0 ID=cds-WP_208624059.1;Parent=gene-LP088_RS13185;Dbxref=Genbank:WP_208624059.1;Name=WP_208624059.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017496.2;locus_tag=LP088_RS13185;product=Uma2 family endonuclease;protein_id=WP_208624059.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2570453 2573299 . + . ID=gene-LP088_RS13190;Name=rapA;gbkey=Gene;gene=rapA;gene_biotype=protein_coding;locus_tag=LP088_RS13190;old_locus_tag=LP088_13070 NZ_CP087814.1 Protein Homology CDS 2570453 2573299 . + 0 ID=cds-WP_078273003.1;Parent=gene-LP088_RS13190;Dbxref=Genbank:WP_078273003.1;Name=WP_078273003.1;Ontology_term=GO:0006355,GO:0005524,GO:0016817,GO:0140658;gbkey=CDS;gene=rapA;go_function=ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides|0016817||IEA,ATP-dependent chromatin remodeler activity|0140658||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013108155.1;locus_tag=LP088_RS13190;product=RNA polymerase-associated protein RapA;protein_id=WP_078273003.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2573316 2573672 . + . ID=gene-LP088_RS13195;Name=LP088_RS13195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13195;old_locus_tag=LP088_13075 NZ_CP087814.1 Protein Homology CDS 2573316 2573672 . + 0 ID=cds-WP_078273002.1;Parent=gene-LP088_RS13195;Dbxref=Genbank:WP_078273002.1;Name=WP_078273002.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014958.2;locus_tag=LP088_RS13195;product=hypothetical protein;protein_id=WP_078273002.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2573676 2575169 . + . ID=gene-LP088_RS13200;Name=LP088_RS13200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13200;old_locus_tag=LP088_13080 NZ_CP087814.1 Protein Homology CDS 2573676 2575169 . + 0 ID=cds-WP_078273001.1;Parent=gene-LP088_RS13200;Dbxref=Genbank:WP_078273001.1;Name=WP_078273001.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003672554.1;locus_tag=LP088_RS13200;product=YifB family Mg chelatase-like AAA ATPase;protein_id=WP_078273001.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2575196 2575948 . + . ID=gene-LP088_RS13205;Name=LP088_RS13205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13205;old_locus_tag=LP088_13085 NZ_CP087814.1 Protein Homology CDS 2575196 2575948 . + 0 ID=cds-WP_078273000.1;Parent=gene-LP088_RS13205;Dbxref=Genbank:WP_078273000.1;Name=WP_078273000.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023393.2;locus_tag=LP088_RS13205;product=recombination protein O N-terminal domain-containing protein;protein_id=WP_078273000.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2575967 2577619 . - . ID=gene-LP088_RS13210;Name=LP088_RS13210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13210;old_locus_tag=LP088_13090 NZ_CP087814.1 Protein Homology CDS 2575967 2577619 . - 0 ID=cds-WP_078272999.1;Parent=gene-LP088_RS13210;Dbxref=Genbank:WP_078272999.1;Name=WP_078272999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513570.1;locus_tag=LP088_RS13210;product=fatty acid--CoA ligase;protein_id=WP_078272999.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2577817 2578353 . - . ID=gene-LP088_RS13215;Name=LP088_RS13215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13215;old_locus_tag=LP088_13095 NZ_CP087814.1 Protein Homology CDS 2577817 2578353 . - 0 ID=cds-WP_078272998.1;Parent=gene-LP088_RS13215;Dbxref=Genbank:WP_078272998.1;Name=WP_078272998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011961393.1;locus_tag=LP088_RS13215;product=YecA family protein;protein_id=WP_078272998.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2578452 2578667 . - . ID=gene-LP088_RS13220;Name=LP088_RS13220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13220;old_locus_tag=LP088_13100 NZ_CP087814.1 Protein Homology CDS 2578452 2578667 . - 0 ID=cds-WP_029102430.1;Parent=gene-LP088_RS13220;Dbxref=Genbank:WP_029102430.1;Name=WP_029102430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011961394.1;locus_tag=LP088_RS13220;product=hypothetical protein;protein_id=WP_029102430.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2578850 2580097 . - . ID=gene-LP088_RS13225;Name=LP088_RS13225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13225;old_locus_tag=LP088_13105 NZ_CP087814.1 GeneMarkS-2+ CDS 2578850 2580097 . - 0 ID=cds-WP_112741737.1;Parent=gene-LP088_RS13225;Dbxref=Genbank:WP_112741737.1;Name=WP_112741737.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS13225;product=hypothetical protein;protein_id=WP_112741737.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2580330 2581535 . + . ID=gene-LP088_RS13230;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=LP088_RS13230;old_locus_tag=LP088_13110 NZ_CP087814.1 Protein Homology CDS 2580330 2581535 . + 0 ID=cds-WP_264676010.1;Parent=gene-LP088_RS13230;Dbxref=Genbank:WP_264676010.1;Name=WP_264676010.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444292.1;locus_tag=LP088_RS13230;product=phosphoserine phosphatase SerB;protein_id=WP_264676010.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2581620 2582141 . + . ID=gene-LP088_RS13235;Name=LP088_RS13235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13235;old_locus_tag=LP088_13115 NZ_CP087814.1 Protein Homology CDS 2581620 2582141 . + 0 ID=cds-WP_112741735.1;Parent=gene-LP088_RS13235;Dbxref=Genbank:WP_112741735.1;Name=WP_112741735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003669300.1;locus_tag=LP088_RS13235;product=hypothetical protein;protein_id=WP_112741735.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2582270 2583745 . - . ID=gene-LP088_RS13240;Name=LP088_RS13240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13240;old_locus_tag=LP088_13120 NZ_CP087814.1 Protein Homology CDS 2582270 2583745 . - 0 ID=cds-WP_078272994.1;Parent=gene-LP088_RS13240;Dbxref=Genbank:WP_078272994.1;Name=WP_078272994.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514613.1;locus_tag=LP088_RS13240;product=UvrD-helicase domain-containing protein;protein_id=WP_078272994.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2583853 2584659 . - . ID=gene-LP088_RS13245;Name=LP088_RS13245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13245;old_locus_tag=LP088_13125 NZ_CP087814.1 Protein Homology CDS 2583853 2584659 . - 0 ID=cds-WP_078272993.1;Parent=gene-LP088_RS13245;Dbxref=Genbank:WP_078272993.1;Name=WP_078272993.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003658652.1;locus_tag=LP088_RS13245;product=acetyl-CoA carboxylase carboxyltransferase subunit alpha;protein_id=WP_078272993.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2584732 2585412 . - . ID=gene-LP088_RS13250;Name=LP088_RS13250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13250;old_locus_tag=LP088_13130 NZ_CP087814.1 GeneMarkS-2+ CDS 2584732 2585412 . - 0 ID=cds-WP_264676011.1;Parent=gene-LP088_RS13250;Dbxref=Genbank:WP_264676011.1;Name=WP_264676011.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS13250;product=hypothetical protein;protein_id=WP_264676011.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2585416 2586972 . - . ID=gene-LP088_RS13255;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=LP088_RS13255;old_locus_tag=LP088_13135 NZ_CP087814.1 Protein Homology CDS 2585416 2586972 . - 0 ID=cds-WP_112741733.1;Parent=gene-LP088_RS13255;Dbxref=Genbank:WP_112741733.1;Name=WP_112741733.1;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003658653.1;locus_tag=LP088_RS13255;product=exopolyphosphatase;protein_id=WP_112741733.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2587301 2588302 . - . ID=gene-LP088_RS13260;Name=LP088_RS13260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13260;old_locus_tag=LP088_13140 NZ_CP087814.1 Protein Homology CDS 2587301 2588302 . - 0 ID=cds-WP_264676012.1;Parent=gene-LP088_RS13260;Dbxref=Genbank:WP_264676012.1;Name=WP_264676012.1;Ontology_term=GO:0001522,GO:0009451,GO:0009982;gbkey=CDS;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520286.1;locus_tag=LP088_RS13260;product=RluA family pseudouridine synthase;protein_id=WP_264676012.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2588916 2592659 . + . ID=gene-LP088_RS13265;Name=LP088_RS13265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13265;old_locus_tag=LP088_13145 NZ_CP087814.1 Protein Homology CDS 2588916 2592659 . + 0 ID=cds-WP_112741732.1;Parent=gene-LP088_RS13265;Dbxref=Genbank:WP_112741732.1;Name=WP_112741732.1;Ontology_term=GO:0006401,GO:0004540;gbkey=CDS;go_function=ribonuclease activity|0004540||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003674271.1;locus_tag=LP088_RS13265;product=Rne/Rng family ribonuclease;protein_id=WP_112741732.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2592771 2592847 . + . ID=gene-LP088_RS13270;Name=LP088_RS13270;gbkey=Gene;gene_biotype=tRNA;locus_tag=LP088_RS13270;old_locus_tag=LP088_13150 NZ_CP087814.1 tRNAscan-SE tRNA 2592771 2592847 . + . ID=rna-LP088_RS13270;Parent=gene-LP088_RS13270;anticodon=(pos:2592805..2592807);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS13270;product=tRNA-Pro NZ_CP087814.1 tRNAscan-SE exon 2592771 2592847 . + . ID=exon-LP088_RS13270-1;Parent=rna-LP088_RS13270;anticodon=(pos:2592805..2592807);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS13270;product=tRNA-Pro NZ_CP087814.1 RefSeq gene 2593013 2594212 . + . ID=gene-LP088_RS13275;Name=LP088_RS13275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13275;old_locus_tag=LP088_13155 NZ_CP087814.1 Protein Homology CDS 2593013 2594212 . + 0 ID=cds-WP_264676013.1;Parent=gene-LP088_RS13275;Dbxref=Genbank:WP_264676013.1;Name=WP_264676013.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF012798.2;locus_tag=LP088_RS13275;product=tyrosine-type recombinase/integrase;protein_id=WP_264676013.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2594496 2594792 . + . ID=gene-LP088_RS13280;Name=LP088_RS13280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13280;old_locus_tag=LP088_13160 NZ_CP087814.1 Protein Homology CDS 2594496 2594792 . + 0 ID=cds-WP_264676014.1;Parent=gene-LP088_RS13280;Dbxref=Genbank:WP_264676014.1;Name=WP_264676014.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020265.2;locus_tag=LP088_RS13280;product=DUF1778 domain-containing protein;protein_id=WP_264676014.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2594782 2595231 . + . ID=gene-LP088_RS13285;Name=LP088_RS13285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13285;old_locus_tag=LP088_13165 NZ_CP087814.1 Protein Homology CDS 2594782 2595231 . + 0 ID=cds-WP_264676015.1;Parent=gene-LP088_RS13285;Dbxref=Genbank:WP_264676015.1;Name=WP_264676015.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025054.2;locus_tag=LP088_RS13285;product=GNAT family N-acetyltransferase;protein_id=WP_264676015.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2595500 2596216 . + . ID=gene-LP088_RS13290;Name=LP088_RS13290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13290;old_locus_tag=LP088_13170 NZ_CP087814.1 GeneMarkS-2+ CDS 2595500 2596216 . + 0 ID=cds-WP_264676016.1;Parent=gene-LP088_RS13290;Dbxref=Genbank:WP_264676016.1;Name=WP_264676016.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS13290;product=hypothetical protein;protein_id=WP_264676016.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2596355 2596552 . + . ID=gene-LP088_RS13295;Name=LP088_RS13295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13295;old_locus_tag=LP088_13175 NZ_CP087814.1 Protein Homology CDS 2596355 2596552 . + 0 ID=cds-WP_264676017.1;Parent=gene-LP088_RS13295;Dbxref=Genbank:WP_264676017.1;Name=WP_264676017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520174.1;locus_tag=LP088_RS13295;product=AlpA family phage regulatory protein;protein_id=WP_264676017.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2596549 2596797 . + . ID=gene-LP088_RS13300;Name=LP088_RS13300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13300;old_locus_tag=LP088_13180 NZ_CP087814.1 Protein Homology CDS 2596549 2596797 . + 0 ID=cds-WP_115369716.1-2;Parent=gene-LP088_RS13300;Dbxref=Genbank:WP_115369716.1;Name=WP_115369716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013108180.1;locus_tag=LP088_RS13300;product=hypothetical protein;protein_id=WP_115369716.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2597313 2597537 . + . ID=gene-LP088_RS13305;Name=LP088_RS13305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13305;old_locus_tag=LP088_13185 NZ_CP087814.1 GeneMarkS-2+ CDS 2597313 2597537 . + 0 ID=cds-WP_264676708.1-2;Parent=gene-LP088_RS13305;Dbxref=Genbank:WP_264676708.1;Name=WP_264676708.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS13305;product=hypothetical protein;protein_id=WP_264676708.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2598132 2598374 . + . ID=gene-LP088_RS13310;Name=LP088_RS13310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13310;old_locus_tag=LP088_13190 NZ_CP087814.1 GeneMarkS-2+ CDS 2598132 2598374 . + 0 ID=cds-WP_264676019.1-2;Parent=gene-LP088_RS13310;Dbxref=Genbank:WP_264676019.1;Name=WP_264676019.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS13310;product=hypothetical protein;protein_id=WP_264676019.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2598361 2600616 . + . ID=gene-LP088_RS13315;Name=LP088_RS13315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13315;old_locus_tag=LP088_13195 NZ_CP087814.1 Protein Homology CDS 2598361 2600616 . + 0 ID=cds-WP_264676020.1-2;Parent=gene-LP088_RS13315;Dbxref=Genbank:WP_264676020.1;Name=WP_264676020.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017826.2;locus_tag=LP088_RS13315;product=DUF927 domain-containing protein;protein_id=WP_264676020.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2601959 2602540 . + . ID=gene-LP088_RS13320;Name=LP088_RS13320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13320;old_locus_tag=LP088_13200 NZ_CP087814.1 GeneMarkS-2+ CDS 2601959 2602540 . + 0 ID=cds-WP_112741731.1;Parent=gene-LP088_RS13320;Dbxref=Genbank:WP_112741731.1;Name=WP_112741731.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS13320;product=hypothetical protein;protein_id=WP_112741731.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2602666 2603367 . - . ID=gene-LP088_RS13325;Name=LP088_RS13325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13325;old_locus_tag=LP088_13205 NZ_CP087814.1 Protein Homology CDS 2602666 2603367 . - 0 ID=cds-WP_078275358.1-4;Parent=gene-LP088_RS13325;Dbxref=Genbank:WP_078275358.1;Name=WP_078275358.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015586042.1;locus_tag=LP088_RS13325;product=IS1 family transposase;protein_id=WP_078275358.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2603514 2604221 . - . ID=gene-LP088_RS13330;Name=LP088_RS13330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13330;old_locus_tag=LP088_13210 NZ_CP087814.1 Protein Homology CDS 2603514 2604221 . - 0 ID=cds-WP_244893670.1;Parent=gene-LP088_RS13330;Dbxref=Genbank:WP_244893670.1;Name=WP_244893670.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: protein motif:HMM:NF012234.2;locus_tag=LP088_RS13330;product=AAA family ATPase;protein_id=WP_244893670.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2604229 2604663 . - . ID=gene-LP088_RS13335;Name=LP088_RS13335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13335;old_locus_tag=LP088_13215 NZ_CP087814.1 GeneMarkS-2+ CDS 2604229 2604663 . - 0 ID=cds-WP_228157747.1;Parent=gene-LP088_RS13335;Dbxref=Genbank:WP_228157747.1;Name=WP_228157747.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS13335;product=hypothetical protein;protein_id=WP_228157747.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2604724 2605482 . - . ID=gene-LP088_RS13340;Name=LP088_RS13340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13340;old_locus_tag=LP088_13220 NZ_CP087814.1 Protein Homology CDS 2604724 2605482 . - 0 ID=cds-WP_078274620.1;Parent=gene-LP088_RS13340;Dbxref=Genbank:WP_078274620.1;Name=WP_078274620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019673276.1;locus_tag=LP088_RS13340;product=tRNA threonylcarbamoyladenosine dehydratase;protein_id=WP_078274620.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2605681 2606517 . - . ID=gene-LP088_RS13345;Name=LP088_RS13345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13345;old_locus_tag=LP088_13225 NZ_CP087814.1 Protein Homology CDS 2605681 2606517 . - 0 ID=cds-WP_078274621.1;Parent=gene-LP088_RS13345;Dbxref=Genbank:WP_078274621.1;Name=WP_078274621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003671644.1;locus_tag=LP088_RS13345;product=TatD family hydrolase;protein_id=WP_078274621.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2606613 2609480 . - . ID=gene-LP088_RS13350;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=LP088_RS13350;old_locus_tag=LP088_13230 NZ_CP087814.1 Protein Homology CDS 2606613 2609480 . - 0 ID=cds-WP_078274622.1;Parent=gene-LP088_RS13350;Dbxref=Genbank:WP_078274622.1;Name=WP_078274622.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000083363.1;locus_tag=LP088_RS13350;product=excinuclease ABC subunit UvrA;protein_id=WP_078274622.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2609695 2610210 . - . ID=gene-LP088_RS13355;Name=LP088_RS13355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13355;old_locus_tag=LP088_13235 NZ_CP087814.1 Protein Homology CDS 2609695 2610210 . - 0 ID=cds-WP_078274623.1;Parent=gene-LP088_RS13355;Dbxref=Genbank:WP_078274623.1;Name=WP_078274623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005016837.1;locus_tag=LP088_RS13355;product=hypothetical protein;protein_id=WP_078274623.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2610794 2611840 . + . ID=gene-LP088_RS13360;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=LP088_RS13360;old_locus_tag=LP088_13240 NZ_CP087814.1 Protein Homology CDS 2610794 2611840 . + 0 ID=cds-WP_078274624.1;Parent=gene-LP088_RS13360;Dbxref=Genbank:WP_078274624.1;Name=WP_078274624.1;Ontology_term=GO:0048473,GO:0005524,GO:0033232,GO:0009898,GO:0055052;gbkey=CDS;gene=metN;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ABC-type D-methionine transporter activity|0033232||IEA;go_process=D-methionine transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000594016.1;locus_tag=LP088_RS13360;product=methionine ABC transporter ATP-binding protein MetN;protein_id=WP_078274624.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2611830 2612519 . + . ID=gene-LP088_RS13365;Name=LP088_RS13365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13365;old_locus_tag=LP088_13245 NZ_CP087814.1 Protein Homology CDS 2611830 2612519 . + 0 ID=cds-WP_078274625.1;Parent=gene-LP088_RS13365;Dbxref=Genbank:WP_078274625.1;Name=WP_078274625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003664060.1;locus_tag=LP088_RS13365;product=ABC transporter permease;protein_id=WP_078274625.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2612699 2613568 . + . ID=gene-LP088_RS13370;Name=LP088_RS13370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13370;old_locus_tag=LP088_13250 NZ_CP087814.1 Protein Homology CDS 2612699 2613568 . + 0 ID=cds-WP_078274626.1;Parent=gene-LP088_RS13370;Dbxref=Genbank:WP_078274626.1;Name=WP_078274626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003656298.1;locus_tag=LP088_RS13370;product=MetQ/NlpA family lipoprotein;protein_id=WP_078274626.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2613666 2615375 . - . ID=gene-LP088_RS13375;Name=pilB;gbkey=Gene;gene=pilB;gene_biotype=protein_coding;locus_tag=LP088_RS13375;old_locus_tag=LP088_13255 NZ_CP087814.1 Protein Homology CDS 2613666 2615375 . - 0 ID=cds-WP_078274627.1;Parent=gene-LP088_RS13375;Dbxref=Genbank:WP_078274627.1;Name=WP_078274627.1;Ontology_term=GO:0009297,GO:0016887;gbkey=CDS;gene=pilB;go_function=ATP hydrolysis activity|0016887||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520386.1;locus_tag=LP088_RS13375;product=type IV-A pilus assembly ATPase PilB;protein_id=WP_078274627.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2615676 2616425 . + . ID=gene-LP088_RS13380;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=LP088_RS13380;old_locus_tag=LP088_13260 NZ_CP087814.1 Protein Homology CDS 2615676 2616425 . + 0 ID=cds-WP_078274628.1;Parent=gene-LP088_RS13380;Dbxref=Genbank:WP_078274628.1;Name=WP_078274628.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657309.1;locus_tag=LP088_RS13380;product=triose-phosphate isomerase;protein_id=WP_078274628.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2616436 2616732 . + . ID=gene-LP088_RS13385;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=LP088_RS13385;old_locus_tag=LP088_13265 NZ_CP087814.1 Protein Homology CDS 2616436 2616732 . + 0 ID=cds-WP_078274629.1;Parent=gene-LP088_RS13385;Dbxref=Genbank:WP_078274629.1;Name=WP_078274629.1;Ontology_term=GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secG;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520377.1;locus_tag=LP088_RS13385;product=preprotein translocase subunit SecG;protein_id=WP_078274629.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2616893 2617381 . - . ID=gene-LP088_RS13390;Name=LP088_RS13390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13390;old_locus_tag=LP088_13270 NZ_CP087814.1 Protein Homology CDS 2616893 2617381 . - 0 ID=cds-WP_078274630.1;Parent=gene-LP088_RS13390;Dbxref=Genbank:WP_078274630.1;Name=WP_078274630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003660272.1;locus_tag=LP088_RS13390;product=hypothetical protein;protein_id=WP_078274630.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2617543 2619315 . - . ID=gene-LP088_RS13395;Name=LP088_RS13395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13395;old_locus_tag=LP088_13275 NZ_CP087814.1 Protein Homology CDS 2617543 2619315 . - 0 ID=cds-WP_112741730.1;Parent=gene-LP088_RS13395;Dbxref=Genbank:WP_112741730.1;Name=WP_112741730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003673986.1;locus_tag=LP088_RS13395;product=cation acetate symporter;protein_id=WP_112741730.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2619318 2619626 . - . ID=gene-LP088_RS13400;Name=LP088_RS13400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13400;old_locus_tag=LP088_13280 NZ_CP087814.1 Protein Homology CDS 2619318 2619626 . - 0 ID=cds-WP_078274632.1;Parent=gene-LP088_RS13400;Dbxref=Genbank:WP_078274632.1;Name=WP_078274632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007394401.1;locus_tag=LP088_RS13400;product=DUF4212 domain-containing protein;protein_id=WP_078274632.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2619811 2620422 . - . ID=gene-LP088_RS13405;Name=LP088_RS13405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13405;old_locus_tag=LP088_13285 NZ_CP087814.1 Protein Homology CDS 2619811 2620422 . - 0 ID=cds-WP_078274633.1;Parent=gene-LP088_RS13405;Dbxref=Genbank:WP_078274633.1;Name=WP_078274633.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: protein motif:HMM:NF006601.0;locus_tag=LP088_RS13405;product=3'-5' exonuclease;protein_id=WP_078274633.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2620584 2621588 . - . ID=gene-LP088_RS13410;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=LP088_RS13410;old_locus_tag=LP088_13290 NZ_CP087814.1 Protein Homology CDS 2620584 2621588 . - 0 ID=cds-WP_112741729.1;Parent=gene-LP088_RS13410;Dbxref=Genbank:WP_112741729.1;Name=WP_112741729.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519393.1;locus_tag=LP088_RS13410;product=GTPase Era;protein_id=WP_112741729.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2621837 2622580 . - . ID=gene-LP088_RS13415;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=LP088_RS13415;old_locus_tag=LP088_13295 NZ_CP087814.1 Protein Homology CDS 2621837 2622580 . - 0 ID=cds-WP_078274635.1;Parent=gene-LP088_RS13415;Dbxref=Genbank:WP_078274635.1;Name=WP_078274635.1;Ontology_term=GO:0006396,GO:0004525;gbkey=CDS;gene=rnc;go_function=ribonuclease III activity|0004525||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657146.1;locus_tag=LP088_RS13415;product=ribonuclease III;protein_id=WP_078274635.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2622586 2622978 . - . ID=gene-LP088_RS13420;Name=LP088_RS13420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13420;old_locus_tag=LP088_13300 NZ_CP087814.1 Protein Homology CDS 2622586 2622978 . - 0 ID=cds-WP_078274636.1;Parent=gene-LP088_RS13420;Dbxref=Genbank:WP_078274636.1;Name=WP_078274636.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027463.2;locus_tag=LP088_RS13420;product=DUF4845 domain-containing protein;protein_id=WP_078274636.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2623008 2624123 . - . ID=gene-LP088_RS13425;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=LP088_RS13425;old_locus_tag=LP088_13305 NZ_CP087814.1 Protein Homology CDS 2623008 2624123 . - 0 ID=cds-WP_078274637.1;Parent=gene-LP088_RS13425;Dbxref=Genbank:WP_078274637.1;Name=WP_078274637.1;Ontology_term=GO:0006465,GO:0009306,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013108210.1;locus_tag=LP088_RS13425;product=signal peptidase I;protein_id=WP_078274637.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2624175 2625974 . - . ID=gene-LP088_RS13430;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=LP088_RS13430;old_locus_tag=LP088_13310 NZ_CP087814.1 Protein Homology CDS 2624175 2625974 . - 0 ID=cds-WP_078274638.1;Parent=gene-LP088_RS13430;Dbxref=Genbank:WP_078274638.1;Name=WP_078274638.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004463501.1;locus_tag=LP088_RS13430;product=translation elongation factor 4;protein_id=WP_078274638.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2626094 2627314 . - . ID=gene-LP088_RS13435;Name=LP088_RS13435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13435;old_locus_tag=LP088_13315 NZ_CP087814.1 Protein Homology CDS 2626094 2627314 . - 0 ID=cds-WP_078274639.1;Parent=gene-LP088_RS13435;Dbxref=Genbank:WP_078274639.1;Name=WP_078274639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519870.1;locus_tag=LP088_RS13435;product=capsular biosynthesis protein;protein_id=WP_078274639.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2627424 2629580 . - . ID=gene-LP088_RS13440;Name=LP088_RS13440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13440;old_locus_tag=LP088_13320 NZ_CP087814.1 Protein Homology CDS 2627424 2629580 . - 0 ID=cds-WP_158079674.1;Parent=gene-LP088_RS13440;Dbxref=Genbank:WP_158079674.1;Name=WP_158079674.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017011.2;locus_tag=LP088_RS13440;product=capsular polysaccharide biosynthesis protein;protein_id=WP_158079674.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2629589 2631295 . - . ID=gene-LP088_RS13445;Name=LP088_RS13445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13445;old_locus_tag=LP088_13325 NZ_CP087814.1 Protein Homology CDS 2629589 2631295 . - 0 ID=cds-WP_112741727.1;Parent=gene-LP088_RS13445;Dbxref=Genbank:WP_112741727.1;Name=WP_112741727.1;Ontology_term=GO:0015774,GO:0015159,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=polysaccharide transmembrane transporter activity|0015159||IEA;go_process=polysaccharide transport|0015774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004970259.1;locus_tag=LP088_RS13445;product=polysaccharide biosynthesis/export family protein;protein_id=WP_112741727.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2631312 2632421 . - . ID=gene-LP088_RS13450;Name=LP088_RS13450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13450;old_locus_tag=LP088_13330 NZ_CP087814.1 Protein Homology CDS 2631312 2632421 . - 0 ID=cds-WP_112741726.1;Parent=gene-LP088_RS13450;Dbxref=Genbank:WP_112741726.1;Name=WP_112741726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519082.1;locus_tag=LP088_RS13450;product=capsule biosynthesis protein;protein_id=WP_112741726.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2632399 2633070 . - . ID=gene-LP088_RS13455;Name=LP088_RS13455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13455;old_locus_tag=LP088_13335 NZ_CP087814.1 Protein Homology CDS 2632399 2633070 . - 0 ID=cds-WP_029102398.1;Parent=gene-LP088_RS13455;Dbxref=Genbank:WP_029102398.1;Name=WP_029102398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519081.1;locus_tag=LP088_RS13455;product=ABC transporter ATP-binding protein;protein_id=WP_029102398.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2633080 2633892 . - . ID=gene-LP088_RS13460;Name=LP088_RS13460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13460;old_locus_tag=LP088_13340 NZ_CP087814.1 Protein Homology CDS 2633080 2633892 . - 0 ID=cds-WP_112741725.1;Parent=gene-LP088_RS13460;Dbxref=Genbank:WP_112741725.1;Name=WP_112741725.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201791.1;locus_tag=LP088_RS13460;product=ABC transporter permease;protein_id=WP_112741725.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2634181 2634909 . - . ID=gene-LP088_RS13465;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=LP088_RS13465;old_locus_tag=LP088_13345 NZ_CP087814.1 Protein Homology CDS 2634181 2634909 . - 0 ID=cds-WP_112742773.1;Parent=gene-LP088_RS13465;Dbxref=Genbank:WP_112742773.1;Name=WP_112742773.1;Ontology_term=GO:0015628,GO:0005886;gbkey=CDS;gene=tatC;go_component=plasma membrane|0005886||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011281257.1;locus_tag=LP088_RS13465;product=twin-arginine translocase subunit TatC;protein_id=WP_112742773.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2634942 2635466 . - . ID=gene-LP088_RS13470;Name=LP088_RS13470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13470;old_locus_tag=LP088_13350 NZ_CP087814.1 Protein Homology CDS 2634942 2635466 . - 0 ID=cds-WP_264676021.1;Parent=gene-LP088_RS13470;Dbxref=Genbank:WP_264676021.1;Name=WP_264676021.1;Ontology_term=GO:0015031;gbkey=CDS;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003670005.1;locus_tag=LP088_RS13470;product=twin-arginine translocase TatA/TatE family subunit;protein_id=WP_264676021.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2635473 2635694 . - . ID=gene-LP088_RS13475;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=LP088_RS13475;old_locus_tag=LP088_13355 NZ_CP087814.1 Protein Homology CDS 2635473 2635694 . - 0 ID=cds-WP_264676022.1;Parent=gene-LP088_RS13475;Dbxref=Genbank:WP_264676022.1;Name=WP_264676022.1;Ontology_term=GO:0043953,GO:0016020;gbkey=CDS;gene=tatA;go_component=membrane|0016020||IEA;go_process=protein transport by the Tat complex|0043953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003661127.1;locus_tag=LP088_RS13475;product=Sec-independent protein translocase subunit TatA;protein_id=WP_264676022.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2635760 2636548 . - . ID=gene-LP088_RS13480;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=protein_coding;locus_tag=LP088_RS13480;old_locus_tag=LP088_13360 NZ_CP087814.1 Protein Homology CDS 2635760 2636548 . - 0 ID=cds-WP_264676023.1;Parent=gene-LP088_RS13480;Dbxref=Genbank:WP_264676023.1;Name=WP_264676023.1;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019672681.1;locus_tag=LP088_RS13480;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=WP_264676023.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2636618 2637310 . - . ID=gene-LP088_RS13485;Name=LP088_RS13485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13485;old_locus_tag=LP088_13365 NZ_CP087814.1 Protein Homology CDS 2636618 2637310 . - 0 ID=cds-WP_264676348.1;Parent=gene-LP088_RS13485;Dbxref=Genbank:WP_264676348.1;Name=WP_264676348.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024779.2;locus_tag=LP088_RS13485;product=DUF4105 domain-containing protein;protein_id=WP_264676348.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2637250 2637714 . - . ID=gene-LP088_RS13490;Name=LP088_RS13490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13490;old_locus_tag=LP088_13370 NZ_CP087814.1 GeneMarkS-2+ CDS 2637250 2637714 . - 0 ID=cds-WP_264676024.1;Parent=gene-LP088_RS13490;Dbxref=Genbank:WP_264676024.1;Name=WP_264676024.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS13490;product=hypothetical protein;protein_id=WP_264676024.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2637892 2638089 . + . ID=gene-LP088_RS13495;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=LP088_RS13495;old_locus_tag=LP088_13375 NZ_CP087814.1 Protein Homology CDS 2637892 2638089 . + 0 ID=cds-WP_029102391.1;Parent=gene-LP088_RS13495;Dbxref=Genbank:WP_029102391.1;Name=WP_029102391.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmI;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011281253.1;locus_tag=LP088_RS13495;product=50S ribosomal protein L35;protein_id=WP_029102391.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2638106 2638462 . + . ID=gene-LP088_RS13500;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=LP088_RS13500;old_locus_tag=LP088_13380 NZ_CP087814.1 Protein Homology CDS 2638106 2638462 . + 0 ID=cds-WP_079325634.1;Parent=gene-LP088_RS13500;Dbxref=Genbank:WP_079325634.1;Name=WP_079325634.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplT;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310450.1;locus_tag=LP088_RS13500;product=50S ribosomal protein L20;protein_id=WP_079325634.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2638694 2640070 . + . ID=gene-LP088_RS13505;Name=hemN;gbkey=Gene;gene=hemN;gene_biotype=protein_coding;locus_tag=LP088_RS13505;old_locus_tag=LP088_13385 NZ_CP087814.1 Protein Homology CDS 2638694 2640070 . + 0 ID=cds-WP_264690399.1;Parent=gene-LP088_RS13505;Dbxref=Genbank:WP_264690399.1;Name=WP_264690399.1;Ontology_term=GO:0006779,GO:0051989;gbkey=CDS;gene=hemN;go_function=coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013108168.1;locus_tag=LP088_RS13505;product=oxygen-independent coproporphyrinogen III oxidase;protein_id=WP_264690399.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2640121 2641071 . - . ID=gene-LP088_RS13510;Name=LP088_RS13510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13510;old_locus_tag=LP088_13390 NZ_CP087814.1 Protein Homology CDS 2640121 2641071 . - 0 ID=cds-WP_115368942.1;Parent=gene-LP088_RS13510;Dbxref=Genbank:WP_115368942.1;Name=WP_115368942.1;Ontology_term=GO:0098662,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=inorganic cation transmembrane transport|0098662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005402262.1;locus_tag=LP088_RS13510;product=calcium/sodium antiporter;protein_id=WP_115368942.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2641176 2643674 . - . ID=gene-LP088_RS13515;Name=LP088_RS13515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13515;old_locus_tag=LP088_13395 NZ_CP087814.1 Protein Homology CDS 2641176 2643674 . - 0 ID=cds-WP_264676026.1;Parent=gene-LP088_RS13515;Dbxref=Genbank:WP_264676026.1;Name=WP_264676026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519541.1;locus_tag=LP088_RS13515;product=GIY-YIG nuclease family protein;protein_id=WP_264676026.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2643676 2644761 . - . ID=gene-LP088_RS13520;Name=LP088_RS13520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13520;old_locus_tag=LP088_13400 NZ_CP087814.1 Protein Homology CDS 2643676 2644761 . - 0 ID=cds-WP_264676027.1;Parent=gene-LP088_RS13520;Dbxref=Genbank:WP_264676027.1;Name=WP_264676027.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020442.2;locus_tag=LP088_RS13520;product=FRG domain-containing protein;protein_id=WP_264676027.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2644751 2645029 . - . ID=gene-LP088_RS13525;Name=LP088_RS13525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13525;old_locus_tag=LP088_13405 NZ_CP087814.1 GeneMarkS-2+ CDS 2644751 2645029 . - 0 ID=cds-WP_264676028.1;Parent=gene-LP088_RS13525;Dbxref=Genbank:WP_264676028.1;Name=WP_264676028.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS13525;product=hypothetical protein;protein_id=WP_264676028.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2645186 2646412 . - . ID=gene-LP088_RS13530;Name=LP088_RS13530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13530;old_locus_tag=LP088_13410 NZ_CP087814.1 Protein Homology CDS 2645186 2646412 . - 0 ID=cds-WP_264676029.1;Parent=gene-LP088_RS13530;Dbxref=Genbank:WP_264676029.1;Name=WP_264676029.1;Ontology_term=GO:0006304,GO:0003677,GO:0003824;gbkey=CDS;go_function=DNA binding|0003677||IEA,catalytic activity|0003824||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: protein motif:HMM:NF019291.2;locus_tag=LP088_RS13530;product=Eco57I restriction-modification methylase domain-containing protein;protein_id=WP_264676029.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2646413 2646781 . - . ID=gene-LP088_RS13535;Name=LP088_RS13535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13535;old_locus_tag=LP088_13415 NZ_CP087814.1 GeneMarkS-2+ CDS 2646413 2646781 . - 0 ID=cds-WP_264676030.1;Parent=gene-LP088_RS13535;Dbxref=Genbank:WP_264676030.1;Name=WP_264676030.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS13535;product=DNA methyltransferase;protein_id=WP_264676030.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2646771 2647481 . - . ID=gene-LP088_RS13540;Name=LP088_RS13540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13540;old_locus_tag=LP088_13420 NZ_CP087814.1 Protein Homology CDS 2646771 2647481 . - 0 ID=cds-WP_078274654.1;Parent=gene-LP088_RS13540;Dbxref=Genbank:WP_078274654.1;Name=WP_078274654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003668757.1;locus_tag=LP088_RS13540;product=restriction endonuclease subunit M;protein_id=WP_078274654.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2647820 2648992 . - . ID=gene-LP088_RS13545;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=protein_coding;locus_tag=LP088_RS13545;old_locus_tag=LP088_13425 NZ_CP087814.1 Protein Homology CDS 2647820 2648992 . - 0 ID=cds-WP_264676031.1;Parent=gene-LP088_RS13545;Dbxref=Genbank:WP_264676031.1;Name=WP_264676031.1;Ontology_term=GO:0006631,GO:0003988;gbkey=CDS;gene=fadA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000212712.1;locus_tag=LP088_RS13545;product=acetyl-CoA C-acyltransferase FadA;protein_id=WP_264676031.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2649072 2653640 . - . ID=gene-LP088_RS13550;Name=LP088_RS13550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13550;old_locus_tag=LP088_13430 NZ_CP087814.1 Protein Homology CDS 2649072 2653640 . - 0 ID=cds-WP_078274656.1;Parent=gene-LP088_RS13550;Dbxref=Genbank:WP_078274656.1;Name=WP_078274656.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033510.3;locus_tag=LP088_RS13550;product=Ig-like domain-containing protein;protein_id=WP_078274656.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2653745 2654062 . - . ID=gene-LP088_RS13555;Name=LP088_RS13555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13555;old_locus_tag=LP088_13435 NZ_CP087814.1 GeneMarkS-2+ CDS 2653745 2654062 . - 0 ID=cds-WP_078274657.1;Parent=gene-LP088_RS13555;Dbxref=Genbank:WP_078274657.1;Name=WP_078274657.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS13555;product=hypothetical protein;protein_id=WP_078274657.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2654111 2654326 . - . ID=gene-LP088_RS13560;Name=LP088_RS13560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13560;old_locus_tag=LP088_13440 NZ_CP087814.1 GeneMarkS-2+ CDS 2654111 2654326 . - 0 ID=cds-WP_078274658.1;Parent=gene-LP088_RS13560;Dbxref=Genbank:WP_078274658.1;Name=WP_078274658.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS13560;product=hypothetical protein;protein_id=WP_078274658.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2654317 2654490 . - . ID=gene-LP088_RS13565;Name=LP088_RS13565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13565;old_locus_tag=LP088_13445 NZ_CP087814.1 GeneMarkS-2+ CDS 2654317 2654490 . - 0 ID=cds-WP_158079676.1;Parent=gene-LP088_RS13565;Dbxref=Genbank:WP_158079676.1;Name=WP_158079676.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS13565;product=hypothetical protein;protein_id=WP_158079676.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2654574 2656724 . - . ID=gene-LP088_RS13570;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=protein_coding;locus_tag=LP088_RS13570;old_locus_tag=LP088_13450 NZ_CP087814.1 Protein Homology CDS 2654574 2656724 . - 0 ID=cds-WP_264676032.1;Parent=gene-LP088_RS13570;Dbxref=Genbank:WP_264676032.1;Name=WP_264676032.1;Ontology_term=GO:0006631,GO:0016491,GO:0070403;gbkey=CDS;gene=fadB;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011281191.1;locus_tag=LP088_RS13570;product=fatty acid oxidation complex subunit alpha FadB;protein_id=WP_264676032.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2656970 2658244 . - . ID=gene-LP088_RS13575;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=LP088_RS13575;old_locus_tag=LP088_13455 NZ_CP087814.1 Protein Homology CDS 2656970 2658244 . - 0 ID=cds-WP_115368935.1;Parent=gene-LP088_RS13575;Dbxref=Genbank:WP_115368935.1;Name=WP_115368935.1;Ontology_term=GO:0006508,GO:0004252,GO:0005524,GO:0051082,GO:0009368;gbkey=CDS;gene=clpX;go_component=endopeptidase Clp complex|0009368||IEA;go_function=serine-type endopeptidase activity|0004252||IEA,ATP binding|0005524||IEA,unfolded protein binding|0051082||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519031.1;locus_tag=LP088_RS13575;product=ATP-dependent protease ATP-binding subunit ClpX;protein_id=WP_115368935.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2658304 2658957 . - . ID=gene-LP088_RS13580;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=LP088_RS13580;old_locus_tag=LP088_13460 NZ_CP087814.1 Protein Homology CDS 2658304 2658957 . - 0 ID=cds-WP_264676033.1;Parent=gene-LP088_RS13580;Dbxref=Genbank:WP_264676033.1;Name=WP_264676033.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514544.1;locus_tag=LP088_RS13580;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WP_264676033.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2659271 2660605 . - . ID=gene-LP088_RS13585;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=LP088_RS13585;old_locus_tag=LP088_13465 NZ_CP087814.1 Protein Homology CDS 2659271 2660605 . - 0 ID=cds-WP_264676034.1;Parent=gene-LP088_RS13585;Dbxref=Genbank:WP_264676034.1;Name=WP_264676034.1;Ontology_term=GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process='de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003672793.1;locus_tag=LP088_RS13585;product=trigger factor;protein_id=WP_264676034.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2660760 2661374 . - . ID=gene-LP088_RS13590;Name=rdgB;gbkey=Gene;gene=rdgB;gene_biotype=protein_coding;locus_tag=LP088_RS13590;old_locus_tag=LP088_13470 NZ_CP087814.1 Protein Homology CDS 2660760 2661374 . - 0 ID=cds-WP_078274663.1;Parent=gene-LP088_RS13590;Dbxref=Genbank:WP_078274663.1;Name=WP_078274663.1;Ontology_term=GO:0006281,GO:0016462;gbkey=CDS;gene=rdgB;go_function=pyrophosphatase activity|0016462||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003661040.1;locus_tag=LP088_RS13590;product=RdgB/HAM1 family non-canonical purine NTP pyrophosphatase;protein_id=WP_078274663.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2661525 2662706 . + . ID=gene-LP088_RS13595;Name=LP088_RS13595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13595;old_locus_tag=LP088_13475 NZ_CP087814.1 Protein Homology CDS 2661525 2662706 . + 0 ID=cds-WP_078274664.1;Parent=gene-LP088_RS13595;Dbxref=Genbank:WP_078274664.1;Name=WP_078274664.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017770.2;locus_tag=LP088_RS13595;product=YjgN family protein;protein_id=WP_078274664.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2662713 2663711 . + . ID=gene-LP088_RS13600;Name=LP088_RS13600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13600;old_locus_tag=LP088_13480 NZ_CP087814.1 Protein Homology CDS 2662713 2663711 . + 0 ID=cds-WP_112741713.1;Parent=gene-LP088_RS13600;Dbxref=Genbank:WP_112741713.1;Name=WP_112741713.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013594.2;locus_tag=LP088_RS13600;product=M48 family metallopeptidase;protein_id=WP_112741713.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2663760 2664794 . - . ID=gene-LP088_RS13605;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=LP088_RS13605;old_locus_tag=LP088_13485 NZ_CP087814.1 Protein Homology CDS 2663760 2664794 . - 0 ID=cds-WP_078274666.1;Parent=gene-LP088_RS13605;Dbxref=Genbank:WP_078274666.1;Name=WP_078274666.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279420.1;locus_tag=LP088_RS13605;product=UDP-glucose 4-epimerase GalE;protein_id=WP_078274666.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2664818 2666098 . - . ID=gene-LP088_RS13610;Name=LP088_RS13610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13610;old_locus_tag=LP088_13490 NZ_CP087814.1 Protein Homology CDS 2664818 2666098 . - 0 ID=cds-WP_078274667.1;Parent=gene-LP088_RS13610;Dbxref=Genbank:WP_078274667.1;Name=WP_078274667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009767118.1;locus_tag=LP088_RS13610;product=UDP-glucose 6-dehydrogenase;protein_id=WP_078274667.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2666133 2667749 . - . ID=gene-LP088_RS13615;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=LP088_RS13615;old_locus_tag=LP088_13495 NZ_CP087814.1 Protein Homology CDS 2666133 2667749 . - 0 ID=cds-WP_078274668.1;Parent=gene-LP088_RS13615;Dbxref=Genbank:WP_078274668.1;Name=WP_078274668.1;Ontology_term=GO:0006094,GO:0006096,GO:0004347;gbkey=CDS;gene=pgi;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009767117.1;locus_tag=LP088_RS13615;product=glucose-6-phosphate isomerase;protein_id=WP_078274668.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2667793 2668659 . - . ID=gene-LP088_RS13620;Name=LP088_RS13620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13620;old_locus_tag=LP088_13500 NZ_CP087814.1 Protein Homology CDS 2667793 2668659 . - 0 ID=cds-WP_264676035.1;Parent=gene-LP088_RS13620;Dbxref=Genbank:WP_264676035.1;Name=WP_264676035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011959560.1;locus_tag=LP088_RS13620;product=UTP--glucose-1-phosphate uridylyltransferase;protein_id=WP_264676035.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2668659 2670086 . - . ID=gene-LP088_RS13625;Name=LP088_RS13625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13625;old_locus_tag=LP088_13505 NZ_CP087814.1 Protein Homology CDS 2668659 2670086 . - 0 ID=cds-WP_078274670.1;Parent=gene-LP088_RS13625;Dbxref=Genbank:WP_078274670.1;Name=WP_078274670.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025025.2;locus_tag=LP088_RS13625;product=glycosyltransferase;protein_id=WP_078274670.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2670122 2671291 . - . ID=gene-LP088_RS13630;Name=LP088_RS13630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13630;old_locus_tag=LP088_13510 NZ_CP087814.1 Protein Homology CDS 2670122 2671291 . - 0 ID=cds-WP_078274671.1;Parent=gene-LP088_RS13630;Dbxref=Genbank:WP_078274671.1;Name=WP_078274671.1;Ontology_term=GO:0000271,GO:0003979,GO:0016616,GO:0051287;gbkey=CDS;go_function=UDP-glucose 6-dehydrogenase activity|0003979||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016540685.1;locus_tag=LP088_RS13630;product=nucleotide sugar dehydrogenase;protein_id=WP_078274671.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2671293 2671481 . - . ID=gene-LP088_RS13635;Name=LP088_RS13635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13635;old_locus_tag=LP088_13515 NZ_CP087814.1 GeneMarkS-2+ CDS 2671293 2671481 . - 0 ID=cds-WP_143821703.1;Parent=gene-LP088_RS13635;Dbxref=Genbank:WP_143821703.1;Name=WP_143821703.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS13635;product=hypothetical protein;protein_id=WP_143821703.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2671750 2673810 . - . ID=gene-LP088_RS13640;Name=LP088_RS13640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13640;old_locus_tag=LP088_13520 NZ_CP087814.1 Protein Homology CDS 2671750 2673810 . - 0 ID=cds-WP_169836098.1;Parent=gene-LP088_RS13640;Dbxref=Genbank:WP_169836098.1;Name=WP_169836098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009767113.1;locus_tag=LP088_RS13640;product=glycosyltransferase;protein_id=WP_169836098.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2673831 2675372 . - . ID=gene-LP088_RS13645;Name=LP088_RS13645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13645;old_locus_tag=LP088_13525 NZ_CP087814.1 GeneMarkS-2+ CDS 2673831 2675372 . - 0 ID=cds-WP_078274672.1;Parent=gene-LP088_RS13645;Dbxref=Genbank:WP_078274672.1;Name=WP_078274672.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS13645;product=hypothetical protein;protein_id=WP_078274672.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2675464 2676909 . - . ID=gene-LP088_RS13650;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=LP088_RS13650;old_locus_tag=LP088_13530 NZ_CP087814.1 Protein Homology CDS 2675464 2676909 . - 0 ID=cds-WP_264676349.1;Parent=gene-LP088_RS13650;Dbxref=Genbank:WP_264676349.1;Name=WP_264676349.1;Ontology_term=GO:0006096,GO:0045454,GO:0051068,GO:0004148;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase activity|0004148||IEA;go_process=glycolytic process|0006096||IEA,cell redox homeostasis|0045454||IEA,dihydrolipoamide metabolic process|0051068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004996415.1;locus_tag=LP088_RS13650;product=dihydrolipoyl dehydrogenase;protein_id=WP_264676349.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2676970 2678190 . - . ID=gene-LP088_RS13655;Name=odhB;gbkey=Gene;gene=odhB;gene_biotype=protein_coding;locus_tag=LP088_RS13655;old_locus_tag=LP088_13535 NZ_CP087814.1 Protein Homology CDS 2676970 2678190 . - 0 ID=cds-WP_112741705.1;Parent=gene-LP088_RS13655;Dbxref=Genbank:WP_112741705.1;Name=WP_112741705.1;Ontology_term=GO:0006099,GO:0004149,GO:0045252;gbkey=CDS;gene=odhB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003667308.1;locus_tag=LP088_RS13655;product=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;protein_id=WP_112741705.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2678289 2681135 . - . ID=gene-LP088_RS13660;Name=LP088_RS13660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13660;old_locus_tag=LP088_13540 NZ_CP087814.1 Protein Homology CDS 2678289 2681135 . - 0 ID=cds-WP_078274674.1;Parent=gene-LP088_RS13660;Dbxref=Genbank:WP_078274674.1;Name=WP_078274674.1;Ontology_term=GO:0006099,GO:0004591,GO:0030976;gbkey=CDS;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003663368.1;locus_tag=LP088_RS13660;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_078274674.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2682200 2682505 . - . ID=gene-LP088_RS13665;Name=LP088_RS13665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13665;old_locus_tag=LP088_13545 NZ_CP087814.1 Protein Homology CDS 2682200 2682505 . - 0 ID=cds-WP_244893672.1;Parent=gene-LP088_RS13665;Dbxref=Genbank:WP_244893672.1;Name=WP_244893672.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03661.1;locus_tag=LP088_RS13665;product=type I secretion C-terminal target domain-containing protein;protein_id=WP_244893672.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 2682503 2682709 . - . ID=gene-LP088_RS13670;Name=LP088_RS13670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS13670;partial=true;pseudo=true;start_range=.,2682503 NZ_CP087814.1 Protein Homology CDS 2682503 2682709 . - 0 ID=cds-LP088_RS13670;Parent=gene-LP088_RS13670;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011082418.1;locus_tag=LP088_RS13670;partial=true;product=calcium-binding protein;pseudo=true;start_range=.,2682503;transl_table=11 NZ_CP087814.1 RefSeq gene 2683246 2683932 . - . ID=gene-LP088_RS13675;Name=LP088_RS13675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13675;old_locus_tag=LP088_13555 NZ_CP087814.1 GeneMarkS-2+ CDS 2683246 2683932 . - 0 ID=cds-WP_264676037.1;Parent=gene-LP088_RS13675;Dbxref=Genbank:WP_264676037.1;Name=WP_264676037.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS13675;product=hypothetical protein;protein_id=WP_264676037.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2684366 2684836 . + . ID=gene-LP088_RS13680;Name=LP088_RS13680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13680;old_locus_tag=LP088_13560 NZ_CP087814.1 GeneMarkS-2+ CDS 2684366 2684836 . + 0 ID=cds-WP_264676039.1;Parent=gene-LP088_RS13680;Dbxref=Genbank:WP_264676039.1;Name=WP_264676039.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS13680;product=hypothetical protein;protein_id=WP_264676039.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2684833 2685273 . + . ID=gene-LP088_RS13685;Name=LP088_RS13685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13685;old_locus_tag=LP088_13565 NZ_CP087814.1 GeneMarkS-2+ CDS 2684833 2685273 . + 0 ID=cds-WP_078274679.1;Parent=gene-LP088_RS13685;Dbxref=Genbank:WP_078274679.1;Name=WP_078274679.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS13685;product=hypothetical protein;protein_id=WP_078274679.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2685291 2685800 . + . ID=gene-LP088_RS13690;Name=LP088_RS13690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13690;old_locus_tag=LP088_13570 NZ_CP087814.1 Protein Homology CDS 2685291 2685800 . + 0 ID=cds-WP_078274680.1;Parent=gene-LP088_RS13690;Dbxref=Genbank:WP_078274680.1;Name=WP_078274680.1;Ontology_term=GO:0032784,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004956698.1;locus_tag=LP088_RS13690;product=GreA/GreB family elongation factor;protein_id=WP_078274680.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2685805 2686452 . + . ID=gene-LP088_RS13695;Name=LP088_RS13695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13695;old_locus_tag=LP088_13575 NZ_CP087814.1 Protein Homology CDS 2685805 2686452 . + 0 ID=cds-WP_078274681.1;Parent=gene-LP088_RS13695;Dbxref=Genbank:WP_078274681.1;Name=WP_078274681.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014299.2;locus_tag=LP088_RS13695;product=AAA family ATPase;protein_id=WP_078274681.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2686454 2686876 . - . ID=gene-LP088_RS13700;Name=LP088_RS13700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13700;old_locus_tag=LP088_13580 NZ_CP087814.1 Protein Homology CDS 2686454 2686876 . - 0 ID=cds-WP_078274682.1;Parent=gene-LP088_RS13700;Dbxref=Genbank:WP_078274682.1;Name=WP_078274682.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021141.2;locus_tag=LP088_RS13700;product=DUF2459 domain-containing protein;protein_id=WP_078274682.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2686858 2687124 . - . ID=gene-LP088_RS13705;Name=LP088_RS13705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13705 NZ_CP087814.1 Protein Homology CDS 2686858 2687124 . - 0 ID=cds-WP_112741703.1;Parent=gene-LP088_RS13705;Dbxref=Genbank:WP_112741703.1;Name=WP_112741703.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021141.2;locus_tag=LP088_RS13705;product=DUF2459 domain-containing protein;protein_id=WP_112741703.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2687199 2687909 . - . ID=gene-LP088_RS13710;Name=LP088_RS13710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13710;old_locus_tag=LP088_13585 NZ_CP087814.1 Protein Homology CDS 2687199 2687909 . - 0 ID=cds-WP_078274684.1;Parent=gene-LP088_RS13710;Dbxref=Genbank:WP_078274684.1;Name=WP_078274684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016651020.1;locus_tag=LP088_RS13710;product=succinate dehydrogenase iron-sulfur subunit;protein_id=WP_078274684.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2688044 2689897 . - . ID=gene-LP088_RS13715;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=LP088_RS13715;old_locus_tag=LP088_13590 NZ_CP087814.1 Protein Homology CDS 2688044 2689897 . - 0 ID=cds-WP_112741702.1;Parent=gene-LP088_RS13715;Dbxref=Genbank:WP_112741702.1;Name=WP_112741702.1;Ontology_term=GO:0006099,GO:0022900,GO:0016627,GO:0050660;gbkey=CDS;gene=sdhA;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019836785.1;locus_tag=LP088_RS13715;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_112741702.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2689939 2690295 . - . ID=gene-LP088_RS13720;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;locus_tag=LP088_RS13720;old_locus_tag=LP088_13595 NZ_CP087814.1 Protein Homology CDS 2689939 2690295 . - 0 ID=cds-WP_029103419.1;Parent=gene-LP088_RS13720;Dbxref=Genbank:WP_029103419.1;Name=WP_029103419.1;Ontology_term=GO:0006099,GO:0000104,GO:0045282;gbkey=CDS;gene=sdhD;go_component=plasma membrane succinate dehydrogenase complex|0045282||IEA;go_function=succinate dehydrogenase activity|0000104||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011959551.1;locus_tag=LP088_RS13720;product=succinate dehydrogenase%2C hydrophobic membrane anchor protein;protein_id=WP_029103419.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2690295 2690675 . - . ID=gene-LP088_RS13725;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;locus_tag=LP088_RS13725;old_locus_tag=LP088_13600 NZ_CP087814.1 Protein Homology CDS 2690295 2690675 . - 0 ID=cds-WP_078274686.1;Parent=gene-LP088_RS13725;Dbxref=Genbank:WP_078274686.1;Name=WP_078274686.1;Ontology_term=GO:0006099,GO:0000104,GO:0045282;gbkey=CDS;gene=sdhC;go_component=plasma membrane succinate dehydrogenase complex|0045282||IEA;go_function=succinate dehydrogenase activity|0000104||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011959550.1;locus_tag=LP088_RS13725;product=succinate dehydrogenase%2C cytochrome b556 subunit;protein_id=WP_078274686.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2691547 2691717 . + . ID=gene-LP088_RS13730;Name=LP088_RS13730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13730;old_locus_tag=LP088_13605 NZ_CP087814.1 GeneMarkS-2+ CDS 2691547 2691717 . + 0 ID=cds-WP_158079677.1;Parent=gene-LP088_RS13730;Dbxref=Genbank:WP_158079677.1;Name=WP_158079677.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS13730;product=hypothetical protein;protein_id=WP_158079677.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2691733 2693010 . + . ID=gene-LP088_RS13735;Name=gltA;gbkey=Gene;gene=gltA;gene_biotype=protein_coding;locus_tag=LP088_RS13735;old_locus_tag=LP088_13610 NZ_CP087814.1 Protein Homology CDS 2691733 2693010 . + 0 ID=cds-WP_078274688.1;Parent=gene-LP088_RS13735;Dbxref=Genbank:WP_078274688.1;Name=WP_078274688.1;Ontology_term=GO:0006099,GO:0004108;gbkey=CDS;gene=gltA;go_function=citrate (Si)-synthase activity|0004108||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003667313.1;locus_tag=LP088_RS13735;product=citrate synthase;protein_id=WP_078274688.1;transl_table=11 NZ_CP087814.1 cmsearch sequence_feature 2693438 2693560 . + . ID=id-NZ_CP087814.1:2693438..2693560;Dbxref=RFAM:RF00514;Note=His leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 NZ_CP087814.1 RefSeq gene 2693583 2694473 . + . ID=gene-LP088_RS13740;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=LP088_RS13740;old_locus_tag=LP088_13615 NZ_CP087814.1 Protein Homology CDS 2693583 2694473 . + 0 ID=cds-WP_264676040.1;Parent=gene-LP088_RS13740;Dbxref=Genbank:WP_264676040.1;Name=WP_264676040.1;Ontology_term=GO:0000105,GO:0003879;gbkey=CDS;gene=hisG;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: protein motif:HMM:TIGR00070.1;locus_tag=LP088_RS13740;product=ATP phosphoribosyltransferase;protein_id=WP_264676040.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2694611 2695894 . + . ID=gene-LP088_RS13745;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=LP088_RS13745;old_locus_tag=LP088_13620 NZ_CP087814.1 Protein Homology CDS 2694611 2695894 . + 0 ID=cds-WP_078274690.1;Parent=gene-LP088_RS13745;Dbxref=Genbank:WP_078274690.1;Name=WP_078274690.1;Ontology_term=GO:0000105,GO:0004399;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: protein motif:HMM:NF013013.2;locus_tag=LP088_RS13745;product=histidinol dehydrogenase;protein_id=WP_078274690.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2695997 2697052 . + . ID=gene-LP088_RS13750;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=LP088_RS13750;old_locus_tag=LP088_13625 NZ_CP087814.1 Protein Homology CDS 2695997 2697052 . + 0 ID=cds-WP_078274691.1;Parent=gene-LP088_RS13750;Dbxref=Genbank:WP_078274691.1;Name=WP_078274691.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: protein motif:HMM:TIGR01141.1;locus_tag=LP088_RS13750;product=histidinol-phosphate transaminase;protein_id=WP_078274691.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2697163 2698251 . + . ID=gene-LP088_RS13755;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=LP088_RS13755;old_locus_tag=LP088_13630 NZ_CP087814.1 Protein Homology CDS 2697163 2698251 . + 0 ID=cds-WP_112741700.1;Parent=gene-LP088_RS13755;Dbxref=Genbank:WP_112741700.1;Name=WP_112741700.1;Ontology_term=GO:0000105,GO:0004401,GO:0004424;gbkey=CDS;gene=hisB;go_function=histidinol-phosphatase activity|0004401||IEA,imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: protein motif:HMM:NF003937.0;locus_tag=LP088_RS13755;product=bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_112741700.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2698414 2699016 . + . ID=gene-LP088_RS13760;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=LP088_RS13760;old_locus_tag=LP088_13635 NZ_CP087814.1 Protein Homology CDS 2698414 2699016 . + 0 ID=cds-WP_112741699.1;Parent=gene-LP088_RS13760;Dbxref=Genbank:WP_112741699.1;Name=WP_112741699.1;Ontology_term=GO:0000105,GO:0000107,GO:0016884;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA,carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: protein motif:HMM:TIGR01855.1;locus_tag=LP088_RS13760;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_112741699.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2699123 2699851 . + . ID=gene-LP088_RS13765;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=LP088_RS13765;old_locus_tag=LP088_13640 NZ_CP087814.1 Protein Homology CDS 2699123 2699851 . + 0 ID=cds-WP_228157742.1;Parent=gene-LP088_RS13765;Dbxref=Genbank:WP_228157742.1;Name=WP_228157742.1;Ontology_term=GO:0000105,GO:0003949;gbkey=CDS;gene=hisA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007525894.1;locus_tag=LP088_RS13765;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=WP_228157742.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2699845 2700651 . + . ID=gene-LP088_RS13770;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=LP088_RS13770;old_locus_tag=LP088_13645 NZ_CP087814.1 Protein Homology CDS 2699845 2700651 . + 0 ID=cds-WP_112741698.1;Parent=gene-LP088_RS13770;Dbxref=Genbank:WP_112741698.1;Name=WP_112741698.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: protein motif:HMM:TIGR00735.1;locus_tag=LP088_RS13770;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_112741698.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2700706 2701740 . - . ID=gene-LP088_RS13775;Name=LP088_RS13775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13775;old_locus_tag=LP088_13650 NZ_CP087814.1 Protein Homology CDS 2700706 2701740 . - 0 ID=cds-WP_158079678.1;Parent=gene-LP088_RS13775;Dbxref=Genbank:WP_158079678.1;Name=WP_158079678.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027890.2;locus_tag=LP088_RS13775;product=HlyD family secretion protein;protein_id=WP_158079678.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2701906 2703519 . - . ID=gene-LP088_RS13780;Name=LP088_RS13780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13780;old_locus_tag=LP088_13655 NZ_CP087814.1 Protein Homology CDS 2701906 2703519 . - 0 ID=cds-WP_112741697.1;Parent=gene-LP088_RS13780;Dbxref=Genbank:WP_112741697.1;Name=WP_112741697.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019310.2;locus_tag=LP088_RS13780;product=MFS transporter;protein_id=WP_112741697.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2703796 2704665 . + . ID=gene-LP088_RS13785;Name=LP088_RS13785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13785;old_locus_tag=LP088_13660 NZ_CP087814.1 Protein Homology CDS 2703796 2704665 . + 0 ID=cds-WP_078274702.1;Parent=gene-LP088_RS13785;Dbxref=Genbank:WP_078274702.1;Name=WP_078274702.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024242.2;locus_tag=LP088_RS13785;product=helix-turn-helix domain-containing protein;protein_id=WP_078274702.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2704805 2706097 . + . ID=gene-LP088_RS13790;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=LP088_RS13790;old_locus_tag=LP088_13665 NZ_CP087814.1 Protein Homology CDS 2704805 2706097 . + 0 ID=cds-WP_112741696.1;Parent=gene-LP088_RS13790;Dbxref=Genbank:WP_112741696.1;Name=WP_112741696.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011959501.1;locus_tag=LP088_RS13790;product=beta-ketoacyl-ACP synthase II;protein_id=WP_112741696.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2706155 2706640 . - . ID=gene-LP088_RS13795;Name=LP088_RS13795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13795;old_locus_tag=LP088_13670 NZ_CP087814.1 GeneMarkS-2+ CDS 2706155 2706640 . - 0 ID=cds-WP_112741695.1;Parent=gene-LP088_RS13795;Dbxref=Genbank:WP_112741695.1;Name=WP_112741695.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS13795;product=hypothetical protein;protein_id=WP_112741695.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2707123 2707263 . + . ID=gene-LP088_RS13800;Name=ykgO;gbkey=Gene;gene=ykgO;gene_biotype=protein_coding;locus_tag=LP088_RS13800;old_locus_tag=LP088_13675 NZ_CP087814.1 Protein Homology CDS 2707123 2707263 . + 0 ID=cds-WP_029103571.1;Parent=gene-LP088_RS13800;Dbxref=Genbank:WP_029103571.1;Name=WP_029103571.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=ykgO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020079454.1;locus_tag=LP088_RS13800;product=type B 50S ribosomal protein L36;protein_id=WP_029103571.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2707437 2707778 . + . ID=gene-LP088_RS13805;Name=LP088_RS13805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13805;old_locus_tag=LP088_13680 NZ_CP087814.1 Protein Homology CDS 2707437 2707778 . + 0 ID=cds-WP_228157741.1;Parent=gene-LP088_RS13805;Dbxref=Genbank:WP_228157741.1;Name=WP_228157741.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013936.2;locus_tag=LP088_RS13805;product=hemerythrin domain-containing protein;protein_id=WP_228157741.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2707766 2707900 . + . ID=gene-LP088_RS13810;Name=LP088_RS13810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13810 NZ_CP087814.1 GeneMarkS-2+ CDS 2707766 2707900 . + 0 ID=cds-WP_264676041.1;Parent=gene-LP088_RS13810;Dbxref=Genbank:WP_264676041.1;Name=WP_264676041.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS13810;product=hypothetical protein;protein_id=WP_264676041.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2707952 2708107 . + . ID=gene-LP088_RS13815;Name=LP088_RS13815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13815;old_locus_tag=LP088_13685 NZ_CP087814.1 GeneMarkS-2+ CDS 2707952 2708107 . + 0 ID=cds-WP_158079680.1;Parent=gene-LP088_RS13815;Dbxref=Genbank:WP_158079680.1;Name=WP_158079680.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS13815;product=hypothetical protein;protein_id=WP_158079680.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2708102 2708377 . - . ID=gene-LP088_RS13820;Name=LP088_RS13820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13820;old_locus_tag=LP088_13690 NZ_CP087814.1 GeneMarkS-2+ CDS 2708102 2708377 . - 0 ID=cds-WP_078274708.1;Parent=gene-LP088_RS13820;Dbxref=Genbank:WP_078274708.1;Name=WP_078274708.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS13820;product=hypothetical protein;protein_id=WP_078274708.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2708664 2708909 . - . ID=gene-LP088_RS13825;Name=LP088_RS13825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13825;old_locus_tag=LP088_13695 NZ_CP087814.1 GeneMarkS-2+ CDS 2708664 2708909 . - 0 ID=cds-WP_078274709.1;Parent=gene-LP088_RS13825;Dbxref=Genbank:WP_078274709.1;Name=WP_078274709.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS13825;product=hypothetical protein;protein_id=WP_078274709.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2709032 2709361 . - . ID=gene-LP088_RS13830;Name=LP088_RS13830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13830;old_locus_tag=LP088_13700 NZ_CP087814.1 GeneMarkS-2+ CDS 2709032 2709361 . - 0 ID=cds-WP_264676042.1;Parent=gene-LP088_RS13830;Dbxref=Genbank:WP_264676042.1;Name=WP_264676042.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS13830;product=hypothetical protein;protein_id=WP_264676042.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2709480 2709737 . + . ID=gene-LP088_RS13835;Name=LP088_RS13835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13835;old_locus_tag=LP088_13705 NZ_CP087814.1 GeneMarkS-2+ CDS 2709480 2709737 . + 0 ID=cds-WP_112741693.1;Parent=gene-LP088_RS13835;Dbxref=Genbank:WP_112741693.1;Name=WP_112741693.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS13835;product=hypothetical protein;protein_id=WP_112741693.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2710230 2711105 . + . ID=gene-LP088_RS13840;Name=LP088_RS13840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13840;old_locus_tag=LP088_13710 NZ_CP087814.1 Protein Homology CDS 2710230 2711105 . + 0 ID=cds-WP_162860331.1;Parent=gene-LP088_RS13840;Dbxref=Genbank:WP_162860331.1;Name=WP_162860331.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF041109.1;locus_tag=LP088_RS13840;product=virulence factor TspB C-terminal domain-related protein;protein_id=WP_162860331.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2711102 2711395 . + . ID=gene-LP088_RS13845;Name=LP088_RS13845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13845;old_locus_tag=LP088_13715 NZ_CP087814.1 Protein Homology CDS 2711102 2711395 . + 0 ID=cds-WP_078274720.1;Parent=gene-LP088_RS13845;Dbxref=Genbank:WP_078274720.1;Name=WP_078274720.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022194.2;locus_tag=LP088_RS13845;product=DUF2523 family protein;protein_id=WP_078274720.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2711481 2712641 . + . ID=gene-LP088_RS13850;Name=LP088_RS13850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13850;old_locus_tag=LP088_13720 NZ_CP087814.1 Protein Homology CDS 2711481 2712641 . + 0 ID=cds-WP_078274721.1;Parent=gene-LP088_RS13850;Dbxref=Genbank:WP_078274721.1;Name=WP_078274721.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017518.2;locus_tag=LP088_RS13850;product=hypothetical protein;protein_id=WP_078274721.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2712705 2713040 . + . ID=gene-LP088_RS13855;Name=LP088_RS13855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13855;old_locus_tag=LP088_13725 NZ_CP087814.1 Protein Homology CDS 2712705 2713040 . + 0 ID=cds-WP_228157738.1;Parent=gene-LP088_RS13855;Dbxref=Genbank:WP_228157738.1;Name=WP_228157738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019518702.1;locus_tag=LP088_RS13855;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_228157738.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2713030 2713311 . + . ID=gene-LP088_RS13860;Name=LP088_RS13860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13860;old_locus_tag=LP088_13730 NZ_CP087814.1 Protein Homology CDS 2713030 2713311 . + 0 ID=cds-WP_078274722.1;Parent=gene-LP088_RS13860;Dbxref=Genbank:WP_078274722.1;Name=WP_078274722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019673833.1;locus_tag=LP088_RS13860;product=helix-turn-helix domain-containing protein;protein_id=WP_078274722.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2713361 2714185 . + . ID=gene-LP088_RS13865;Name=LP088_RS13865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13865;old_locus_tag=LP088_13735 NZ_CP087814.1 Protein Homology CDS 2713361 2714185 . + 0 ID=cds-WP_078274723.1;Parent=gene-LP088_RS13865;Dbxref=Genbank:WP_078274723.1;Name=WP_078274723.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012798.2;locus_tag=LP088_RS13865;product=site-specific integrase;protein_id=WP_078274723.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2714301 2714513 . + . ID=gene-LP088_RS13870;Name=LP088_RS13870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13870;old_locus_tag=LP088_13740 NZ_CP087814.1 GeneMarkS-2+ CDS 2714301 2714513 . + 0 ID=cds-WP_078274724.1;Parent=gene-LP088_RS13870;Dbxref=Genbank:WP_078274724.1;Name=WP_078274724.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS13870;product=hypothetical protein;protein_id=WP_078274724.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2714553 2715275 . - . ID=gene-LP088_RS13875;Name=LP088_RS13875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13875;old_locus_tag=LP088_13745 NZ_CP087814.1 Protein Homology CDS 2714553 2715275 . - 0 ID=cds-WP_029103568.1;Parent=gene-LP088_RS13875;Dbxref=Genbank:WP_029103568.1;Name=WP_029103568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003667098.1;locus_tag=LP088_RS13875;product=nitroreductase family protein;protein_id=WP_029103568.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2715420 2716745 . - . ID=gene-LP088_RS13880;Name=LP088_RS13880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13880;old_locus_tag=LP088_13750 NZ_CP087814.1 Protein Homology CDS 2715420 2716745 . - 0 ID=cds-WP_112741690.1;Parent=gene-LP088_RS13880;Dbxref=Genbank:WP_112741690.1;Name=WP_112741690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519749.1;locus_tag=LP088_RS13880;product=hemolysin family protein;protein_id=WP_112741690.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2716855 2717613 . - . ID=gene-LP088_RS13885;Name=LP088_RS13885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13885;old_locus_tag=LP088_13755 NZ_CP087814.1 Protein Homology CDS 2716855 2717613 . - 0 ID=cds-WP_078274726.1;Parent=gene-LP088_RS13885;Dbxref=Genbank:WP_078274726.1;Name=WP_078274726.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442511.1;locus_tag=LP088_RS13885;product=YciK family oxidoreductase;protein_id=WP_078274726.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2717890 2718579 . - . ID=gene-LP088_RS13890;Name=LP088_RS13890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13890;old_locus_tag=LP088_13760 NZ_CP087814.1 Protein Homology CDS 2717890 2718579 . - 0 ID=cds-WP_079323962.1;Parent=gene-LP088_RS13890;Dbxref=Genbank:WP_079323962.1;Name=WP_079323962.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011961331.1;locus_tag=LP088_RS13890;product=HAD-IA family hydrolase;protein_id=WP_079323962.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2718581 2719339 . - . ID=gene-LP088_RS13895;Name=ubiG;gbkey=Gene;gene=ubiG;gene_biotype=protein_coding;locus_tag=LP088_RS13895;old_locus_tag=LP088_13765 NZ_CP087814.1 Protein Homology CDS 2718581 2719339 . - 0 ID=cds-WP_078274728.1;Parent=gene-LP088_RS13895;Dbxref=Genbank:WP_078274728.1;Name=WP_078274728.1;Ontology_term=GO:0006744,GO:0008689;gbkey=CDS;gene=ubiG;go_function=3-demethylubiquinone-9 3-O-methyltransferase activity|0008689||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519024.1;locus_tag=LP088_RS13895;product=bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG;protein_id=WP_078274728.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2719622 2720239 . + . ID=gene-LP088_RS13900;Name=LP088_RS13900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13900;old_locus_tag=LP088_13770 NZ_CP087814.1 Protein Homology CDS 2719622 2720239 . + 0 ID=cds-WP_078274729.1;Parent=gene-LP088_RS13900;Dbxref=Genbank:WP_078274729.1;Name=WP_078274729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279433.1;locus_tag=LP088_RS13900;product=thiol:disulfide interchange protein DsbA/DsbL;protein_id=WP_078274729.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2720405 2721001 . - . ID=gene-LP088_RS13905;Name=LP088_RS13905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13905;old_locus_tag=LP088_13775 NZ_CP087814.1 Protein Homology CDS 2720405 2721001 . - 0 ID=cds-WP_264676043.1;Parent=gene-LP088_RS13905;Dbxref=Genbank:WP_264676043.1;Name=WP_264676043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007394706.1;locus_tag=LP088_RS13905;product=YigZ family protein;protein_id=WP_264676043.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2721080 2721781 . + . ID=gene-LP088_RS13910;Name=LP088_RS13910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13910;old_locus_tag=LP088_13780 NZ_CP087814.1 Protein Homology CDS 2721080 2721781 . + 0 ID=cds-WP_078274731.1;Parent=gene-LP088_RS13910;Dbxref=Genbank:WP_078274731.1;Name=WP_078274731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003662138.1;locus_tag=LP088_RS13910;product=16S rRNA pseudouridine(516) synthase;protein_id=WP_078274731.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2721959 2722963 . + . ID=gene-LP088_RS13915;Name=LP088_RS13915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13915;old_locus_tag=LP088_13785 NZ_CP087814.1 Protein Homology CDS 2721959 2722963 . + 0 ID=cds-WP_264676044.1;Parent=gene-LP088_RS13915;Dbxref=Genbank:WP_264676044.1;Name=WP_264676044.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024498.2;locus_tag=LP088_RS13915;product=DsbC family protein;protein_id=WP_264676044.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2723300 2723800 . + . ID=gene-LP088_RS13920;Name=rraA;gbkey=Gene;gene=rraA;gene_biotype=protein_coding;locus_tag=LP088_RS13920;old_locus_tag=LP088_13790 NZ_CP087814.1 Protein Homology CDS 2723300 2723800 . + 0 ID=cds-WP_078274733.1;Parent=gene-LP088_RS13920;Dbxref=Genbank:WP_078274733.1;Name=WP_078274733.1;Ontology_term=GO:0051252,GO:0008428;gbkey=CDS;gene=rraA;go_function=ribonuclease inhibitor activity|0008428||IEA;go_process=regulation of RNA metabolic process|0051252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000029522.1;locus_tag=LP088_RS13920;product=ribonuclease E activity regulator RraA;protein_id=WP_078274733.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2724008 2724454 . - . ID=gene-LP088_RS13925;Name=LP088_RS13925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13925;old_locus_tag=LP088_13795 NZ_CP087814.1 GeneMarkS-2+ CDS 2724008 2724454 . - 0 ID=cds-WP_264676045.1;Parent=gene-LP088_RS13925;Dbxref=Genbank:WP_264676045.1;Name=WP_264676045.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS13925;product=hypothetical protein;protein_id=WP_264676045.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2724441 2725277 . - . ID=gene-LP088_RS13930;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=LP088_RS13930;old_locus_tag=LP088_13800 NZ_CP087814.1 Protein Homology CDS 2724441 2725277 . - 0 ID=cds-WP_264676046.1;Parent=gene-LP088_RS13930;Dbxref=Genbank:WP_264676046.1;Name=WP_264676046.1;Note=Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein.;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=asd;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514528.1;locus_tag=LP088_RS13930;product=archaetidylserine decarboxylase;protein_id=WP_264676046.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2725380 2725532 . + . ID=gene-LP088_RS13935;Name=LP088_RS13935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13935;old_locus_tag=LP088_13805 NZ_CP087814.1 Protein Homology CDS 2725380 2725532 . + 0 ID=cds-WP_112741684.1;Parent=gene-LP088_RS13935;Dbxref=Genbank:WP_112741684.1;Name=WP_112741684.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017082.2;locus_tag=LP088_RS13935;product=hypothetical protein;protein_id=WP_112741684.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2725536 2725793 . + . ID=gene-LP088_RS13940;Name=LP088_RS13940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13940;old_locus_tag=LP088_13810 NZ_CP087814.1 Protein Homology CDS 2725536 2725793 . + 0 ID=cds-WP_112741683.1;Parent=gene-LP088_RS13940;Dbxref=Genbank:WP_112741683.1;Name=WP_112741683.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017082.2;locus_tag=LP088_RS13940;product=hypothetical protein;protein_id=WP_112741683.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2725967 2726404 . + . ID=gene-LP088_RS13945;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=LP088_RS13945;old_locus_tag=LP088_13815 NZ_CP087814.1 Protein Homology CDS 2725967 2726404 . + 0 ID=cds-WP_078274735.1;Parent=gene-LP088_RS13945;Dbxref=Genbank:WP_078274735.1;Name=WP_078274735.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003663421.1;locus_tag=LP088_RS13945;product=D-aminoacyl-tRNA deacylase;protein_id=WP_078274735.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2726540 2727250 . - . ID=gene-LP088_RS13950;Name=LP088_RS13950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13950;old_locus_tag=LP088_13820 NZ_CP087814.1 Protein Homology CDS 2726540 2727250 . - 0 ID=cds-WP_112741682.1;Parent=gene-LP088_RS13950;Dbxref=Genbank:WP_112741682.1;Name=WP_112741682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003665024.1;locus_tag=LP088_RS13950;product=folate-binding Fe/S cluster repair protein;protein_id=WP_112741682.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2727369 2727707 . + . ID=gene-LP088_RS13955;Name=LP088_RS13955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13955;old_locus_tag=LP088_13825 NZ_CP087814.1 Protein Homology CDS 2727369 2727707 . + 0 ID=cds-WP_078274737.1;Parent=gene-LP088_RS13955;Dbxref=Genbank:WP_078274737.1;Name=WP_078274737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003656357.1;locus_tag=LP088_RS13955;product=zinc ribbon domain-containing protein YjdM;protein_id=WP_078274737.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2727786 2729345 . - . ID=gene-LP088_RS13960;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=LP088_RS13960;old_locus_tag=LP088_13830 NZ_CP087814.1 Protein Homology CDS 2727786 2729345 . - 0 ID=cds-WP_078274738.1;Parent=gene-LP088_RS13960;Dbxref=Genbank:WP_078274738.1;Name=WP_078274738.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013107611.1;locus_tag=LP088_RS13960;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_078274738.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2729391 2729897 . - . ID=gene-LP088_RS13965;Name=LP088_RS13965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13965;old_locus_tag=LP088_13835 NZ_CP087814.1 Protein Homology CDS 2729391 2729897 . - 0 ID=cds-WP_264676047.1;Parent=gene-LP088_RS13965;Dbxref=Genbank:WP_264676047.1;Name=WP_264676047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657231.1;locus_tag=LP088_RS13965;product=DUF615 domain-containing protein;protein_id=WP_264676047.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2730088 2730957 . - . ID=gene-LP088_RS13970;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=LP088_RS13970;old_locus_tag=LP088_13840 NZ_CP087814.1 Protein Homology CDS 2730088 2730957 . - 0 ID=cds-WP_112741680.1;Parent=gene-LP088_RS13970;Dbxref=Genbank:WP_112741680.1;Name=WP_112741680.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520651.1;locus_tag=LP088_RS13970;product=RNase adapter RapZ;protein_id=WP_112741680.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2730978 2731889 . - . ID=gene-LP088_RS13975;Name=LP088_RS13975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS13975;old_locus_tag=LP088_13845 NZ_CP087814.1 Protein Homology CDS 2730978 2731889 . - 0 ID=cds-WP_078275357.1-9;Parent=gene-LP088_RS13975;Dbxref=Genbank:WP_078275357.1;Name=WP_078275357.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004282326.1;locus_tag=LP088_RS13975;product=IS982 family transposase;protein_id=WP_078275357.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2732125 2732982 . - . ID=gene-LP088_RS13980;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=LP088_RS13980;old_locus_tag=LP088_13850 NZ_CP087814.1 Protein Homology CDS 2732125 2732982 . - 0 ID=cds-WP_112741679.1;Parent=gene-LP088_RS13980;Dbxref=Genbank:WP_112741679.1;Name=WP_112741679.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009767123.1;locus_tag=LP088_RS13980;product=pantoate--beta-alanine ligase;protein_id=WP_112741679.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2732996 2733820 . - . ID=gene-LP088_RS13985;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=LP088_RS13985;old_locus_tag=LP088_13855 NZ_CP087814.1 Protein Homology CDS 2732996 2733820 . - 0 ID=cds-WP_264676048.1;Parent=gene-LP088_RS13985;Dbxref=Genbank:WP_264676048.1;Name=WP_264676048.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657219.1;locus_tag=LP088_RS13985;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_264676048.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2734034 2734567 . - . ID=gene-LP088_RS13990;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=LP088_RS13990;old_locus_tag=LP088_13860 NZ_CP087814.1 Protein Homology CDS 2734034 2734567 . - 0 ID=cds-WP_112741677.1;Parent=gene-LP088_RS13990;Dbxref=Genbank:WP_112741677.1;Name=WP_112741677.1;Ontology_term=GO:0009396,GO:0003848;gbkey=CDS;gene=folK;go_function=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity|0003848||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519827.1;locus_tag=LP088_RS13990;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_112741677.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2734536 2736329 . - . ID=gene-LP088_RS13995;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=LP088_RS13995;old_locus_tag=LP088_13865 NZ_CP087814.1 Protein Homology CDS 2734536 2736329 . - 0 ID=cds-WP_078274756.1;Parent=gene-LP088_RS13995;Dbxref=Genbank:WP_078274756.1;Name=WP_078274756.1;Ontology_term=GO:0006378,GO:0003723,GO:0004652;gbkey=CDS;gene=pcnB;go_function=RNA binding|0003723||IEA,polynucleotide adenylyltransferase activity|0004652||IEA;go_process=mRNA polyadenylation|0006378||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003673421.1;locus_tag=LP088_RS13995;product=polynucleotide adenylyltransferase PcnB;protein_id=WP_078274756.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2736925 2737239 . - . ID=gene-LP088_RS14000;Name=LP088_RS14000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14000;old_locus_tag=LP088_13870 NZ_CP087814.1 Protein Homology CDS 2736925 2737239 . - 0 ID=cds-WP_228157737.1;Parent=gene-LP088_RS14000;Dbxref=Genbank:WP_228157737.1;Name=WP_228157737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010200852.1;locus_tag=LP088_RS14000;product=helix-hairpin-helix domain-containing protein;protein_id=WP_228157737.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2737257 2738159 . - . ID=gene-LP088_RS14005;Name=LP088_RS14005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14005;old_locus_tag=LP088_13875 NZ_CP087814.1 GeneMarkS-2+ CDS 2737257 2738159 . - 0 ID=cds-WP_078274745.1;Parent=gene-LP088_RS14005;Dbxref=Genbank:WP_078274745.1;Name=WP_078274745.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS14005;product=hypothetical protein;protein_id=WP_078274745.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2738253 2738903 . - . ID=gene-LP088_RS14010;Name=LP088_RS14010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14010;old_locus_tag=LP088_13880 NZ_CP087814.1 GeneMarkS-2+ CDS 2738253 2738903 . - 0 ID=cds-WP_143821707.1;Parent=gene-LP088_RS14010;Dbxref=Genbank:WP_143821707.1;Name=WP_143821707.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS14010;product=hypothetical protein;protein_id=WP_143821707.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2739028 2740578 . + . ID=gene-LP088_RS14015;Name=LP088_RS14015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14015;old_locus_tag=LP088_13885 NZ_CP087814.1 GeneMarkS-2+ CDS 2739028 2740578 . + 0 ID=cds-WP_078274747.1;Parent=gene-LP088_RS14015;Dbxref=Genbank:WP_078274747.1;Name=WP_078274747.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS14015;product=hypothetical protein;protein_id=WP_078274747.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2740602 2741807 . + . ID=gene-LP088_RS14020;Name=LP088_RS14020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14020;old_locus_tag=LP088_13890 NZ_CP087814.1 GeneMarkS-2+ CDS 2740602 2741807 . + 0 ID=cds-WP_078274748.1;Parent=gene-LP088_RS14020;Dbxref=Genbank:WP_078274748.1;Name=WP_078274748.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS14020;product=hypothetical protein;protein_id=WP_078274748.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2741810 2741971 . + . ID=gene-LP088_RS14025;Name=LP088_RS14025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14025;old_locus_tag=LP088_13895 NZ_CP087814.1 GeneMarkS-2+ CDS 2741810 2741971 . + 0 ID=cds-WP_158079682.1;Parent=gene-LP088_RS14025;Dbxref=Genbank:WP_158079682.1;Name=WP_158079682.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS14025;product=hypothetical protein;protein_id=WP_158079682.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2742064 2742912 . - . ID=gene-LP088_RS14030;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=LP088_RS14030;old_locus_tag=LP088_13900 NZ_CP087814.1 Protein Homology CDS 2742064 2742912 . - 0 ID=cds-WP_112741676.1;Parent=gene-LP088_RS14030;Dbxref=Genbank:WP_112741676.1;Name=WP_112741676.1;gbkey=CDS;gene=mazG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009767023.1;locus_tag=LP088_RS14030;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_112741676.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2742979 2743908 . - . ID=gene-LP088_RS14035;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=LP088_RS14035;old_locus_tag=LP088_13905 NZ_CP087814.1 Protein Homology CDS 2742979 2743908 . - 0 ID=cds-WP_112741675.1;Parent=gene-LP088_RS14035;Dbxref=Genbank:WP_112741675.1;Name=WP_112741675.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003664791.1;locus_tag=LP088_RS14035;product=cysteine synthase A;protein_id=WP_112741675.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2744094 2745503 . + . ID=gene-LP088_RS14040;Name=LP088_RS14040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14040;old_locus_tag=LP088_13910 NZ_CP087814.1 Protein Homology CDS 2744094 2745503 . + 0 ID=cds-WP_112741674.1;Parent=gene-LP088_RS14040;Dbxref=Genbank:WP_112741674.1;Name=WP_112741674.1;Note=capsular polysaccharide biosynthesis protein%3B catalyzes the formation of D-mannose 6-phosphate from alpha-D-mannose 1-phosphate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003664003.1;locus_tag=LP088_RS14040;product=phosphomannomutase CpsG;protein_id=WP_112741674.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2746034 2746471 . - . ID=gene-LP088_RS14045;Name=LP088_RS14045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14045;old_locus_tag=LP088_13915 NZ_CP087814.1 GeneMarkS-2+ CDS 2746034 2746471 . - 0 ID=cds-WP_112741672.1;Parent=gene-LP088_RS14045;Dbxref=Genbank:WP_112741672.1;Name=WP_112741672.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS14045;product=hypothetical protein;protein_id=WP_112741672.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2746468 2747262 . - . ID=gene-LP088_RS14050;Name=LP088_RS14050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14050;old_locus_tag=LP088_13920 NZ_CP087814.1 Protein Homology CDS 2746468 2747262 . - 0 ID=cds-WP_162860330.1;Parent=gene-LP088_RS14050;Dbxref=Genbank:WP_162860330.1;Name=WP_162860330.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024930.2;locus_tag=LP088_RS14050;product=hypothetical protein;protein_id=WP_162860330.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2747425 2747937 . - . ID=gene-LP088_RS14055;Name=LP088_RS14055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14055;old_locus_tag=LP088_13925 NZ_CP087814.1 Protein Homology CDS 2747425 2747937 . - 0 ID=cds-WP_112742596.1-2;Parent=gene-LP088_RS14055;Dbxref=Genbank:WP_112742596.1;Name=WP_112742596.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023444.2;locus_tag=LP088_RS14055;product=GspH/FimT family protein;protein_id=WP_112742596.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2748072 2748185 . - . ID=gene-LP088_RS14060;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=LP088_RS14060;old_locus_tag=LP088_13930 NZ_CP087814.1 cmsearch rRNA 2748072 2748185 . - . ID=rna-LP088_RS14060;Parent=gene-LP088_RS14060;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LP088_RS14060;product=5S ribosomal RNA NZ_CP087814.1 cmsearch exon 2748072 2748185 . - . ID=exon-LP088_RS14060-1;Parent=rna-LP088_RS14060;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LP088_RS14060;product=5S ribosomal RNA NZ_CP087814.1 RefSeq gene 2748348 2751573 . - . ID=gene-LP088_RS14065;Name=LP088_RS14065;gbkey=Gene;gene_biotype=rRNA;locus_tag=LP088_RS14065;old_locus_tag=LP088_13935 NZ_CP087814.1 cmsearch rRNA 2748348 2751573 . - . ID=rna-LP088_RS14065;Parent=gene-LP088_RS14065;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LP088_RS14065;product=23S ribosomal RNA NZ_CP087814.1 cmsearch exon 2748348 2751573 . - . ID=exon-LP088_RS14065-1;Parent=rna-LP088_RS14065;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LP088_RS14065;product=23S ribosomal RNA NZ_CP087814.1 RefSeq gene 2751890 2751965 . - . ID=gene-LP088_RS14070;Name=LP088_RS14070;gbkey=Gene;gene_biotype=tRNA;locus_tag=LP088_RS14070;old_locus_tag=LP088_13940 NZ_CP087814.1 tRNAscan-SE tRNA 2751890 2751965 . - . ID=rna-LP088_RS14070;Parent=gene-LP088_RS14070;anticodon=(pos:complement(2751930..2751932));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS14070;product=tRNA-Ala NZ_CP087814.1 tRNAscan-SE exon 2751890 2751965 . - . ID=exon-LP088_RS14070-1;Parent=rna-LP088_RS14070;anticodon=(pos:complement(2751930..2751932));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS14070;product=tRNA-Ala NZ_CP087814.1 RefSeq gene 2751971 2752047 . - . ID=gene-LP088_RS14075;Name=LP088_RS14075;gbkey=Gene;gene_biotype=tRNA;locus_tag=LP088_RS14075;old_locus_tag=LP088_13945 NZ_CP087814.1 tRNAscan-SE tRNA 2751971 2752047 . - . ID=rna-LP088_RS14075;Parent=gene-LP088_RS14075;anticodon=(pos:complement(2752011..2752013));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS14075;product=tRNA-Ile NZ_CP087814.1 tRNAscan-SE exon 2751971 2752047 . - . ID=exon-LP088_RS14075-1;Parent=rna-LP088_RS14075;anticodon=(pos:complement(2752011..2752013));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LP088_RS14075;product=tRNA-Ile NZ_CP087814.1 RefSeq gene 2752109 2753639 . - . ID=gene-LP088_RS14080;Name=LP088_RS14080;gbkey=Gene;gene_biotype=rRNA;locus_tag=LP088_RS14080;old_locus_tag=LP088_13950 NZ_CP087814.1 cmsearch rRNA 2752109 2753639 . - . ID=rna-LP088_RS14080;Parent=gene-LP088_RS14080;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LP088_RS14080;product=16S ribosomal RNA NZ_CP087814.1 cmsearch exon 2752109 2753639 . - . ID=exon-LP088_RS14080-1;Parent=rna-LP088_RS14080;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LP088_RS14080;product=16S ribosomal RNA NZ_CP087814.1 RefSeq gene 2754207 2754626 . - . ID=gene-LP088_RS14085;Name=LP088_RS14085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14085;old_locus_tag=LP088_13955 NZ_CP087814.1 Protein Homology CDS 2754207 2754626 . - 0 ID=cds-WP_078274987.1;Parent=gene-LP088_RS14085;Dbxref=Genbank:WP_078274987.1;Name=WP_078274987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019673294.1;locus_tag=LP088_RS14085;product=adhesin;protein_id=WP_078274987.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2754984 2755613 . + . ID=gene-LP088_RS14090;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=LP088_RS14090;old_locus_tag=LP088_13960 NZ_CP087814.1 Protein Homology CDS 2754984 2755613 . + 0 ID=cds-WP_065254916.1;Parent=gene-LP088_RS14090;Dbxref=Genbank:WP_065254916.1;Name=WP_065254916.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009501790.1;locus_tag=LP088_RS14090;product=uracil phosphoribosyltransferase;protein_id=WP_065254916.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2755632 2756462 . - . ID=gene-LP088_RS14095;Name=LP088_RS14095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14095;old_locus_tag=LP088_13965 NZ_CP087814.1 Protein Homology CDS 2755632 2756462 . - 0 ID=cds-WP_181879504.1;Parent=gene-LP088_RS14095;Dbxref=Genbank:WP_181879504.1;Name=WP_181879504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000480208.1;locus_tag=LP088_RS14095;product=metal ABC transporter permease;protein_id=WP_181879504.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2756496 2756915 . - . ID=gene-LP088_RS14100;Name=LP088_RS14100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14100;old_locus_tag=LP088_13970 NZ_CP087814.1 Protein Homology CDS 2756496 2756915 . - 0 ID=cds-WP_264676049.1;Parent=gene-LP088_RS14100;Dbxref=Genbank:WP_264676049.1;Name=WP_264676049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520500.1;locus_tag=LP088_RS14100;product=helix-turn-helix domain-containing protein;protein_id=WP_264676049.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2757055 2757516 . + . ID=gene-LP088_RS14105;Name=LP088_RS14105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14105;old_locus_tag=LP088_13975 NZ_CP087814.1 Protein Homology CDS 2757055 2757516 . + 0 ID=cds-WP_112742766.1;Parent=gene-LP088_RS14105;Dbxref=Genbank:WP_112742766.1;Name=WP_112742766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003668765.1;locus_tag=LP088_RS14105;product=hypothetical protein;protein_id=WP_112742766.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2757595 2758464 . + . ID=gene-LP088_RS14110;Name=LP088_RS14110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14110;old_locus_tag=LP088_13980 NZ_CP087814.1 Protein Homology CDS 2757595 2758464 . + 0 ID=cds-WP_264676050.1;Parent=gene-LP088_RS14110;Dbxref=Genbank:WP_264676050.1;Name=WP_264676050.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019843.2;locus_tag=LP088_RS14110;product=hypothetical protein;protein_id=WP_264676050.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2758633 2759334 . + . ID=gene-LP088_RS14115;Name=LP088_RS14115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14115;old_locus_tag=LP088_13985 NZ_CP087814.1 Protein Homology CDS 2758633 2759334 . + 0 ID=cds-WP_078275358.1-5;Parent=gene-LP088_RS14115;Dbxref=Genbank:WP_078275358.1;Name=WP_078275358.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015586042.1;locus_tag=LP088_RS14115;product=IS1 family transposase;protein_id=WP_078275358.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2759474 2760310 . - . ID=gene-LP088_RS14120;Name=LP088_RS14120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14120;old_locus_tag=LP088_13990 NZ_CP087814.1 Protein Homology CDS 2759474 2760310 . - 0 ID=cds-WP_112742765.1;Parent=gene-LP088_RS14120;Dbxref=Genbank:WP_112742765.1;Name=WP_112742765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005540332.1;locus_tag=LP088_RS14120;product=metal ABC transporter permease;protein_id=WP_112742765.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 2760499 2761335 . - . ID=gene-LP088_RS14125;Name=LP088_RS14125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS14125;old_locus_tag=LP088_13995;partial=true;pseudo=true;start_range=.,2760499 NZ_CP087814.1 Protein Homology CDS 2760499 2761335 . - 0 ID=cds-LP088_RS14125;Parent=gene-LP088_RS14125;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003664066.1;locus_tag=LP088_RS14125;partial=true;product=ATP-binding cassette domain-containing protein;pseudo=true;start_range=.,2760499;transl_table=11 NZ_CP087814.1 RefSeq gene 2761559 2762524 . - . ID=gene-LP088_RS14130;Name=LP088_RS14130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14130;old_locus_tag=LP088_14000 NZ_CP087814.1 Protein Homology CDS 2761559 2762524 . - 0 ID=cds-WP_228157735.1;Parent=gene-LP088_RS14130;Dbxref=Genbank:WP_228157735.1;Name=WP_228157735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003658713.1;locus_tag=LP088_RS14130;product=metal ABC transporter substrate-binding protein;protein_id=WP_228157735.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2763176 2763433 . - . ID=gene-LP088_RS14135;Name=LP088_RS14135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14135;old_locus_tag=LP088_14005 NZ_CP087814.1 Protein Homology CDS 2763176 2763433 . - 0 ID=cds-WP_078274981.1;Parent=gene-LP088_RS14135;Dbxref=Genbank:WP_078274981.1;Name=WP_078274981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003662260.1;locus_tag=LP088_RS14135;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_078274981.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2763755 2765143 . - . ID=gene-LP088_RS14140;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=protein_coding;locus_tag=LP088_RS14140;old_locus_tag=LP088_14010 NZ_CP087814.1 Protein Homology CDS 2763755 2765143 . - 0 ID=cds-WP_112741668.1;Parent=gene-LP088_RS14140;Dbxref=Genbank:WP_112741668.1;Name=WP_112741668.1;Ontology_term=GO:0009252,GO:0016881;gbkey=CDS;gene=mpl;go_function=acid-amino acid ligase activity|0016881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013107623.1;locus_tag=LP088_RS14140;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=WP_112741668.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2765220 2765660 . - . ID=gene-LP088_RS14145;Name=LP088_RS14145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14145;old_locus_tag=LP088_14015 NZ_CP087814.1 Protein Homology CDS 2765220 2765660 . - 0 ID=cds-WP_228157713.1;Parent=gene-LP088_RS14145;Dbxref=Genbank:WP_228157713.1;Name=WP_228157713.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033563.0;locus_tag=LP088_RS14145;product=IS30 family transposase;protein_id=WP_228157713.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2765605 2765997 . - . ID=gene-LP088_RS14150;Name=LP088_RS14150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14150;old_locus_tag=LP088_14020 NZ_CP087814.1 Protein Homology CDS 2765605 2765997 . - 0 ID=cds-WP_228157712.1;Parent=gene-LP088_RS14150;Dbxref=Genbank:WP_228157712.1;Name=WP_228157712.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024954.2;locus_tag=LP088_RS14150;product=helix-turn-helix domain-containing protein;protein_id=WP_228157712.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2766150 2766692 . - . ID=gene-LP088_RS14155;Name=LP088_RS14155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14155;old_locus_tag=LP088_14025 NZ_CP087814.1 Protein Homology CDS 2766150 2766692 . - 0 ID=cds-WP_228157734.1;Parent=gene-LP088_RS14155;Dbxref=Genbank:WP_228157734.1;Name=WP_228157734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011959341.1;locus_tag=LP088_RS14155;product=disulfide bond formation protein B;protein_id=WP_228157734.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2766667 2768226 . - . ID=gene-LP088_RS14160;Name=gshA;gbkey=Gene;gene=gshA;gene_biotype=protein_coding;locus_tag=LP088_RS14160;old_locus_tag=LP088_14030 NZ_CP087814.1 Protein Homology CDS 2766667 2768226 . - 0 ID=cds-WP_112741667.1;Parent=gene-LP088_RS14160;Dbxref=Genbank:WP_112741667.1;Name=WP_112741667.1;Ontology_term=GO:0006750,GO:0004357;gbkey=CDS;gene=gshA;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004659811.1;locus_tag=LP088_RS14160;product=glutamate--cysteine ligase;protein_id=WP_112741667.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2768664 2769023 . - . ID=gene-LP088_RS14165;Name=LP088_RS14165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14165;old_locus_tag=LP088_14035 NZ_CP087814.1 Protein Homology CDS 2768664 2769023 . - 0 ID=cds-WP_264676350.1;Parent=gene-LP088_RS14165;Dbxref=Genbank:WP_264676350.1;Name=WP_264676350.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028042.2;locus_tag=LP088_RS14165;product=type IV pilin protein;protein_id=WP_264676350.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 2768997 2769095 . - . ID=gene-LP088_RS14170;Name=LP088_RS14170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS14170;old_locus_tag=LP088_14040;partial=true;pseudo=true;start_range=.,2768997 NZ_CP087814.1 Protein Homology CDS 2768997 2769095 . - 0 ID=cds-LP088_RS14170;Parent=gene-LP088_RS14170;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016352167.1;locus_tag=LP088_RS14170;partial=true;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;pseudo=true;start_range=.,2768997;transl_table=11 NZ_CP087814.1 RefSeq gene 2769095 2769688 . - . ID=gene-LP088_RS14175;Name=LP088_RS14175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14175;old_locus_tag=LP088_14045 NZ_CP087814.1 Protein Homology CDS 2769095 2769688 . - 0 ID=cds-WP_158079701.1;Parent=gene-LP088_RS14175;Dbxref=Genbank:WP_158079701.1;Name=WP_158079701.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019575.2;locus_tag=LP088_RS14175;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_158079701.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2769690 2773736 . - . ID=gene-LP088_RS14180;Name=LP088_RS14180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14180;old_locus_tag=LP088_14050 NZ_CP087814.1 Protein Homology CDS 2769690 2773736 . - 0 ID=cds-WP_264676052.1;Parent=gene-LP088_RS14180;Dbxref=Genbank:WP_264676052.1;Name=WP_264676052.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017388.2;locus_tag=LP088_RS14180;product=PilC/PilY family type IV pilus protein;protein_id=WP_264676052.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2773781 2774623 . - . ID=gene-LP088_RS14185;Name=LP088_RS14185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14185;old_locus_tag=LP088_14055 NZ_CP087814.1 GeneMarkS-2+ CDS 2773781 2774623 . - 0 ID=cds-WP_264676053.1;Parent=gene-LP088_RS14185;Dbxref=Genbank:WP_264676053.1;Name=WP_264676053.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS14185;product=hypothetical protein;protein_id=WP_264676053.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2774675 2775538 . - . ID=gene-LP088_RS14190;Name=LP088_RS14190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14190;old_locus_tag=LP088_14060 NZ_CP087814.1 Protein Homology CDS 2774675 2775538 . - 0 ID=cds-WP_264676054.1;Parent=gene-LP088_RS14190;Dbxref=Genbank:WP_264676054.1;Name=WP_264676054.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027400.2;locus_tag=LP088_RS14190;product=PilW family protein;protein_id=WP_264676054.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2775631 2776185 . - . ID=gene-LP088_RS14195;Name=pilV;gbkey=Gene;gene=pilV;gene_biotype=protein_coding;locus_tag=LP088_RS14195;old_locus_tag=LP088_14065 NZ_CP087814.1 Protein Homology CDS 2775631 2776185 . - 0 ID=cds-WP_115368888.1;Parent=gene-LP088_RS14195;Dbxref=Genbank:WP_115368888.1;Name=WP_115368888.1;gbkey=CDS;gene=pilV;inference=COORDINATES: protein motif:HMM:TIGR02523.1;locus_tag=LP088_RS14195;product=type IV pilus modification protein PilV;protein_id=WP_115368888.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2776179 2776694 . - . ID=gene-LP088_RS14200;Name=LP088_RS14200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14200;old_locus_tag=LP088_14070 NZ_CP087814.1 Protein Homology CDS 2776179 2776694 . - 0 ID=cds-WP_115368887.1;Parent=gene-LP088_RS14200;Dbxref=Genbank:WP_115368887.1;Name=WP_115368887.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR02532.1;locus_tag=LP088_RS14200;product=GspH/FimT family protein;protein_id=WP_115368887.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2777054 2777410 . - . ID=gene-LP088_RS14205;Name=LP088_RS14205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14205;old_locus_tag=LP088_14075 NZ_CP087814.1 Protein Homology CDS 2777054 2777410 . - 0 ID=cds-WP_029103448.1;Parent=gene-LP088_RS14205;Dbxref=Genbank:WP_029103448.1;Name=WP_029103448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004996733.1;locus_tag=LP088_RS14205;product=hypothetical protein;protein_id=WP_029103448.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2777938 2778675 . - . ID=gene-LP088_RS14210;Name=LP088_RS14210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14210;old_locus_tag=LP088_14080 NZ_CP087814.1 GeneMarkS-2+ CDS 2777938 2778675 . - 0 ID=cds-WP_078274972.1;Parent=gene-LP088_RS14210;Dbxref=Genbank:WP_078274972.1;Name=WP_078274972.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS14210;product=hypothetical protein;protein_id=WP_078274972.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2778796 2779593 . - . ID=gene-LP088_RS14215;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=LP088_RS14215;old_locus_tag=LP088_14085 NZ_CP087814.1 Protein Homology CDS 2778796 2779593 . - 0 ID=cds-WP_112741661.1;Parent=gene-LP088_RS14215;Dbxref=Genbank:WP_112741661.1;Name=WP_112741661.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003662149.1;locus_tag=LP088_RS14215;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_112741661.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2779845 2781035 . - . ID=gene-LP088_RS14220;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=LP088_RS14220;old_locus_tag=LP088_14090 NZ_CP087814.1 Protein Homology CDS 2779845 2781035 . - 0 ID=cds-WP_112741660.1;Parent=gene-LP088_RS14220;Dbxref=Genbank:WP_112741660.1;Name=WP_112741660.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003672785.1;locus_tag=LP088_RS14220;product=molecular chaperone DnaJ;protein_id=WP_112741660.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2781125 2781874 . + . ID=gene-LP088_RS14225;Name=LP088_RS14225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14225;old_locus_tag=LP088_14095 NZ_CP087814.1 Protein Homology CDS 2781125 2781874 . + 0 ID=cds-WP_112741659.1;Parent=gene-LP088_RS14225;Dbxref=Genbank:WP_112741659.1;Name=WP_112741659.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022607.2;locus_tag=LP088_RS14225;product=DUF2939 domain-containing protein;protein_id=WP_112741659.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2781949 2782281 . - . ID=gene-LP088_RS14230;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;locus_tag=LP088_RS14230;old_locus_tag=LP088_14100 NZ_CP087814.1 Protein Homology CDS 2781949 2782281 . - 0 ID=cds-WP_062500809.1;Parent=gene-LP088_RS14230;Dbxref=Genbank:WP_062500809.1;Name=WP_062500809.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=erpA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003670069.1;locus_tag=LP088_RS14230;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_062500809.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2782396 2784327 . + . ID=gene-LP088_RS14235;Name=LP088_RS14235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14235;old_locus_tag=LP088_14105 NZ_CP087814.1 Protein Homology CDS 2782396 2784327 . + 0 ID=cds-WP_078274968.1;Parent=gene-LP088_RS14235;Dbxref=Genbank:WP_078274968.1;Name=WP_078274968.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279350.1;locus_tag=LP088_RS14235;product=ATP-binding cassette domain-containing protein;protein_id=WP_078274968.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2784324 2784971 . + . ID=gene-LP088_RS14240;Name=LP088_RS14240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14240;old_locus_tag=LP088_14110 NZ_CP087814.1 Protein Homology CDS 2784324 2784971 . + 0 ID=cds-WP_112741658.1;Parent=gene-LP088_RS14240;Dbxref=Genbank:WP_112741658.1;Name=WP_112741658.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012451.2;locus_tag=LP088_RS14240;product=DnaJ domain-containing protein;protein_id=WP_112741658.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2785057 2789847 . + . ID=gene-LP088_RS14245;Name=LP088_RS14245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14245;old_locus_tag=LP088_14115 NZ_CP087814.1 Protein Homology CDS 2785057 2789847 . + 0 ID=cds-WP_078274966.1;Parent=gene-LP088_RS14245;Dbxref=Genbank:WP_078274966.1;Name=WP_078274966.1;Ontology_term=GO:0006310,GO:0004386;gbkey=CDS;go_function=helicase activity|0004386||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: protein motif:HMM:TIGR00614.1;locus_tag=LP088_RS14245;product=RecQ family ATP-dependent DNA helicase;protein_id=WP_078274966.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2789949 2790917 . + . ID=gene-LP088_RS14250;Name=LP088_RS14250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14250;old_locus_tag=LP088_14120 NZ_CP087814.1 Protein Homology CDS 2789949 2790917 . + 0 ID=cds-WP_078274965.1;Parent=gene-LP088_RS14250;Dbxref=Genbank:WP_078274965.1;Name=WP_078274965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009767026.1;locus_tag=LP088_RS14250;product=alpha/beta hydrolase;protein_id=WP_078274965.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2790991 2792031 . + . ID=gene-LP088_RS14255;Name=LP088_RS14255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14255;old_locus_tag=LP088_14125 NZ_CP087814.1 Protein Homology CDS 2790991 2792031 . + 0 ID=cds-WP_112741657.1;Parent=gene-LP088_RS14255;Dbxref=Genbank:WP_112741657.1;Name=WP_112741657.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF012376.2;locus_tag=LP088_RS14255;product=metallophosphoesterase;protein_id=WP_112741657.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2792089 2794977 . - . ID=gene-LP088_RS14260;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=LP088_RS14260;old_locus_tag=LP088_14130 NZ_CP087814.1 Protein Homology CDS 2792089 2794977 . - 0 ID=cds-WP_078274934.1;Parent=gene-LP088_RS14260;Dbxref=Genbank:WP_078274934.1;Name=WP_078274934.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442631.1;locus_tag=LP088_RS14260;product=preprotein translocase subunit SecA;protein_id=WP_078274934.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2795332 2796621 . - . ID=gene-LP088_RS14265;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=LP088_RS14265;old_locus_tag=LP088_14135 NZ_CP087814.1 Protein Homology CDS 2795332 2796621 . - 0 ID=cds-WP_078274933.1;Parent=gene-LP088_RS14265;Dbxref=Genbank:WP_078274933.1;Name=WP_078274933.1;Ontology_term=GO:0006779,GO:0042286,GO:0005737;gbkey=CDS;gene=hemL;go_component=cytoplasm|0005737||IEA;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005157947.1;locus_tag=LP088_RS14265;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_078274933.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2796953 2797168 . + . ID=gene-LP088_RS14270;Name=LP088_RS14270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14270;old_locus_tag=LP088_14140 NZ_CP087814.1 GeneMarkS-2+ CDS 2796953 2797168 . + 0 ID=cds-WP_147287302.1;Parent=gene-LP088_RS14270;Dbxref=Genbank:WP_147287302.1;Name=WP_147287302.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS14270;product=hypothetical protein;protein_id=WP_147287302.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2797218 2798171 . - . ID=gene-LP088_RS14275;Name=LP088_RS14275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14275;old_locus_tag=LP088_14145 NZ_CP087814.1 Protein Homology CDS 2797218 2798171 . - 0 ID=cds-WP_228157733.1;Parent=gene-LP088_RS14275;Dbxref=Genbank:WP_228157733.1;Name=WP_228157733.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004976846.1;locus_tag=LP088_RS14275;product=pseudouridine synthase;protein_id=WP_228157733.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 2798179 2798809 . - . ID=gene-LP088_RS14280;Name=LP088_RS14280;end_range=2798809,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS14280;old_locus_tag=LP088_14150;partial=true;pseudo=true NZ_CP087814.1 Protein Homology CDS 2798179 2798809 . - 0 ID=cds-LP088_RS14280;Parent=gene-LP088_RS14280;Note=programmed frameshift%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=2798809,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611661.1;locus_tag=LP088_RS14280;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_CP087814.1 RefSeq gene 2799046 2799399 . + . ID=gene-LP088_RS14285;Name=LP088_RS14285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14285;old_locus_tag=LP088_14155 NZ_CP087814.1 Protein Homology CDS 2799046 2799399 . + 0 ID=cds-WP_112741656.1;Parent=gene-LP088_RS14285;Dbxref=Genbank:WP_112741656.1;Name=WP_112741656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019518837.1;locus_tag=LP088_RS14285;product=ArsR family transcriptional regulator;protein_id=WP_112741656.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2799506 2800489 . + . ID=gene-LP088_RS14290;Name=LP088_RS14290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14290;old_locus_tag=LP088_14160 NZ_CP087814.1 Protein Homology CDS 2799506 2800489 . + 0 ID=cds-WP_112741655.1;Parent=gene-LP088_RS14290;Dbxref=Genbank:WP_112741655.1;Name=WP_112741655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003672652.1;locus_tag=LP088_RS14290;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_112741655.1;transl_table=11 NZ_CP087814.1 RefSeq pseudogene 2800744 2801360 . + . ID=gene-LP088_RS14295;Name=LP088_RS14295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LP088_RS14295;old_locus_tag=LP088_14170;pseudo=true NZ_CP087814.1 Protein Homology CDS 2800744 2801360 . + 0 ID=cds-LP088_RS14295;Parent=gene-LP088_RS14295;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012927.2;locus_tag=LP088_RS14295;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP087814.1 RefSeq gene 2801276 2801842 . + . ID=gene-LP088_RS14300;Name=LP088_RS14300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14300;old_locus_tag=LP088_14175 NZ_CP087814.1 Protein Homology CDS 2801276 2801842 . + 0 ID=cds-WP_264676055.1;Parent=gene-LP088_RS14300;Dbxref=Genbank:WP_264676055.1;Name=WP_264676055.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012927.2;locus_tag=LP088_RS14300;product=hypothetical protein;protein_id=WP_264676055.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2801910 2802062 . + . ID=gene-LP088_RS14305;Name=LP088_RS14305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14305;old_locus_tag=LP088_14180 NZ_CP087814.1 GeneMarkS-2+ CDS 2801910 2802062 . + 0 ID=cds-WP_162860328.1;Parent=gene-LP088_RS14305;Dbxref=Genbank:WP_162860328.1;Name=WP_162860328.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS14305;product=hypothetical protein;protein_id=WP_162860328.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2802215 2802619 . + . ID=gene-LP088_RS14310;Name=LP088_RS14310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14310;old_locus_tag=LP088_14185 NZ_CP087814.1 GeneMarkS-2+ CDS 2802215 2802619 . + 0 ID=cds-WP_078274929.1;Parent=gene-LP088_RS14310;Dbxref=Genbank:WP_078274929.1;Name=WP_078274929.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS14310;product=hypothetical protein;protein_id=WP_078274929.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2802752 2803246 . + . ID=gene-LP088_RS14315;Name=LP088_RS14315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14315;old_locus_tag=LP088_14190 NZ_CP087814.1 Protein Homology CDS 2802752 2803246 . + 0 ID=cds-WP_078274928.1;Parent=gene-LP088_RS14315;Dbxref=Genbank:WP_078274928.1;Name=WP_078274928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201088.1;locus_tag=LP088_RS14315;product=Rrf2 family transcriptional regulator;protein_id=WP_078274928.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2803527 2805887 . - . ID=gene-LP088_RS14320;Name=LP088_RS14320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14320;old_locus_tag=LP088_14195 NZ_CP087814.1 Protein Homology CDS 2803527 2805887 . - 0 ID=cds-WP_264676056.1;Parent=gene-LP088_RS14320;Dbxref=Genbank:WP_264676056.1;Name=WP_264676056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520258.1;locus_tag=LP088_RS14320;product=RNA-binding transcriptional accessory protein;protein_id=WP_264676056.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2806368 2808296 . + . ID=gene-LP088_RS14325;Name=LP088_RS14325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14325;old_locus_tag=LP088_14200 NZ_CP087814.1 Protein Homology CDS 2806368 2808296 . + 0 ID=cds-WP_078274926.1;Parent=gene-LP088_RS14325;Dbxref=Genbank:WP_078274926.1;Name=WP_078274926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009767158.1;locus_tag=LP088_RS14325;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_078274926.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2808373 2809518 . - . ID=gene-LP088_RS14330;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=LP088_RS14330;old_locus_tag=LP088_14205 NZ_CP087814.1 Protein Homology CDS 2808373 2809518 . - 0 ID=cds-WP_078274925.1;Parent=gene-LP088_RS14330;Dbxref=Genbank:WP_078274925.1;Name=WP_078274925.1;Note=All proteins in this family for which functions are known are DNA-binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair.;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0009432,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512381.1;locus_tag=LP088_RS14330;product=DNA replication and repair protein RecF;protein_id=WP_078274925.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2809529 2810671 . - . ID=gene-LP088_RS14335;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=LP088_RS14335;old_locus_tag=LP088_14210 NZ_CP087814.1 Protein Homology CDS 2809529 2810671 . - 0 ID=cds-WP_078274924.1;Parent=gene-LP088_RS14335;Dbxref=Genbank:WP_078274924.1;Name=WP_078274924.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512380.1;locus_tag=LP088_RS14335;product=DNA polymerase III subunit beta;protein_id=WP_078274924.1;transl_table=11 NZ_CP087814.1 RefSeq gene 2811015 2812574 . - . ID=gene-LP088_RS14340;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=LP088_RS14340;old_locus_tag=LP088_14215 NZ_CP087814.1 Protein Homology CDS 2811015 2812574 . - 0 ID=cds-WP_244893693.1;Parent=gene-LP088_RS14340;Dbxref=Genbank:WP_244893693.1;Name=WP_244893693.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019672123.1;locus_tag=LP088_RS14340;product=chromosomal replication initiator protein DnaA;protein_id=WP_244893693.1;transl_table=11 ##sequence-region NZ_CP087815.1 1 46162 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=476 NZ_CP087815.1 RefSeq region 1 46162 . + . ID=NZ_CP087815.1:1..46162;Dbxref=taxon:476;Is_circular=true;Name=unnamed1;collection-date=2015;country=USA: Nebraska;gbkey=Src;genome=plasmid;mol_type=genomic DNA;nat-host=Bovine;plasmid-name=unnamed1;strain=SAM109238 NZ_CP087815.1 RefSeq gene 591 1031 . + . ID=gene-LP088_RS14350;Name=LP088_RS14350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14350;old_locus_tag=LP088_14225 NZ_CP087815.1 GeneMarkS-2+ CDS 591 1031 . + 0 ID=cds-WP_264676358.1;Parent=gene-LP088_RS14350;Dbxref=Genbank:WP_264676358.1;Name=WP_264676358.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS14350;product=hypothetical protein;protein_id=WP_264676358.1;transl_table=11 NZ_CP087815.1 RefSeq gene 1099 1227 . + . ID=gene-LP088_RS14355;Name=LP088_RS14355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14355 NZ_CP087815.1 GeneMarkS-2+ CDS 1099 1227 . + 0 ID=cds-WP_264676359.1;Parent=gene-LP088_RS14355;Dbxref=Genbank:WP_264676359.1;Name=WP_264676359.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS14355;product=hypothetical protein;protein_id=WP_264676359.1;transl_table=11 NZ_CP087815.1 RefSeq gene 1655 2092 . + . ID=gene-LP088_RS14360;Name=LP088_RS14360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14360;old_locus_tag=LP088_14230 NZ_CP087815.1 GeneMarkS-2+ CDS 1655 2092 . + 0 ID=cds-WP_264676360.1;Parent=gene-LP088_RS14360;Dbxref=Genbank:WP_264676360.1;Name=WP_264676360.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS14360;product=hypothetical protein;protein_id=WP_264676360.1;transl_table=11 NZ_CP087815.1 RefSeq gene 2423 3937 . + . ID=gene-LP088_RS14365;Name=LP088_RS14365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14365;old_locus_tag=LP088_14235 NZ_CP087815.1 Protein Homology CDS 2423 3937 . + 0 ID=cds-WP_264690430.1;Parent=gene-LP088_RS14365;Dbxref=Genbank:WP_264690430.1;Name=WP_264690430.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016702.2;locus_tag=LP088_RS14365;product=VENN motif pre-toxin domain-containing protein;protein_id=WP_264690430.1;transl_table=11 NZ_CP087815.1 RefSeq gene 4239 4562 . + . ID=gene-LP088_RS14370;Name=LP088_RS14370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14370;old_locus_tag=LP088_14240 NZ_CP087815.1 GeneMarkS-2+ CDS 4239 4562 . + 0 ID=cds-WP_012477645.1;Parent=gene-LP088_RS14370;Dbxref=Genbank:WP_012477645.1;Name=WP_012477645.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS14370;product=hypothetical protein;protein_id=WP_012477645.1;transl_table=11 NZ_CP087815.1 RefSeq gene 4805 4978 . + . ID=gene-LP088_RS14375;Name=LP088_RS14375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14375;old_locus_tag=LP088_14245 NZ_CP087815.1 GeneMarkS-2+ CDS 4805 4978 . + 0 ID=cds-WP_264676361.1;Parent=gene-LP088_RS14375;Dbxref=Genbank:WP_264676361.1;Name=WP_264676361.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS14375;product=hypothetical protein;protein_id=WP_264676361.1;transl_table=11 NZ_CP087815.1 RefSeq gene 4985 5404 . + . ID=gene-LP088_RS14380;Name=LP088_RS14380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14380;old_locus_tag=LP088_14250 NZ_CP087815.1 GeneMarkS-2+ CDS 4985 5404 . + 0 ID=cds-WP_012477646.1;Parent=gene-LP088_RS14380;Dbxref=Genbank:WP_012477646.1;Name=WP_012477646.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS14380;product=hypothetical protein;protein_id=WP_012477646.1;transl_table=11 NZ_CP087815.1 RefSeq gene 5581 5898 . + . ID=gene-LP088_RS14385;Name=LP088_RS14385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14385;old_locus_tag=LP088_14255 NZ_CP087815.1 GeneMarkS-2+ CDS 5581 5898 . + 0 ID=cds-WP_012477647.1;Parent=gene-LP088_RS14385;Dbxref=Genbank:WP_012477647.1;Name=WP_012477647.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS14385;product=hypothetical protein;protein_id=WP_012477647.1;transl_table=11 NZ_CP087815.1 RefSeq gene 6176 6763 . + . ID=gene-LP088_RS14390;Name=LP088_RS14390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14390;old_locus_tag=LP088_14260 NZ_CP087815.1 Protein Homology CDS 6176 6763 . + 0 ID=cds-WP_112742854.1;Parent=gene-LP088_RS14390;Dbxref=Genbank:WP_112742854.1;Name=WP_112742854.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025767.2;locus_tag=LP088_RS14390;product=GH-E family nuclease;protein_id=WP_112742854.1;transl_table=11 NZ_CP087815.1 RefSeq gene 6753 7241 . + . ID=gene-LP088_RS14395;Name=LP088_RS14395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14395;old_locus_tag=LP088_14265 NZ_CP087815.1 Protein Homology CDS 6753 7241 . + 0 ID=cds-WP_264690431.1;Parent=gene-LP088_RS14395;Dbxref=Genbank:WP_264690431.1;Name=WP_264690431.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024206.2;locus_tag=LP088_RS14395;product=ankyrin repeat domain-containing protein;protein_id=WP_264690431.1;transl_table=11 NZ_CP087815.1 RefSeq gene 7353 7703 . + . ID=gene-LP088_RS14400;Name=LP088_RS14400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14400;old_locus_tag=LP088_14270 NZ_CP087815.1 GeneMarkS-2+ CDS 7353 7703 . + 0 ID=cds-WP_112742856.1;Parent=gene-LP088_RS14400;Dbxref=Genbank:WP_112742856.1;Name=WP_112742856.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS14400;product=adhesin;protein_id=WP_112742856.1;transl_table=11 NZ_CP087815.1 RefSeq gene 7715 8155 . + . ID=gene-LP088_RS14405;Name=LP088_RS14405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14405;old_locus_tag=LP088_14275 NZ_CP087815.1 GeneMarkS-2+ CDS 7715 8155 . + 0 ID=cds-WP_162860469.1;Parent=gene-LP088_RS14405;Dbxref=Genbank:WP_162860469.1;Name=WP_162860469.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS14405;product=hypothetical protein;protein_id=WP_162860469.1;transl_table=11 NZ_CP087815.1 RefSeq gene 8136 9173 . + . ID=gene-LP088_RS14410;Name=LP088_RS14410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14410;old_locus_tag=LP088_14280 NZ_CP087815.1 Protein Homology CDS 8136 9173 . + 0 ID=cds-WP_264690432.1;Parent=gene-LP088_RS14410;Dbxref=Genbank:WP_264690432.1;Name=WP_264690432.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019227.2;locus_tag=LP088_RS14410;product=polymorphic toxin-type HINT domain-containing protein;protein_id=WP_264690432.1;transl_table=11 NZ_CP087815.1 RefSeq gene 9646 10086 . + . ID=gene-LP088_RS14415;Name=LP088_RS14415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14415;old_locus_tag=LP088_14285 NZ_CP087815.1 GeneMarkS-2+ CDS 9646 10086 . + 0 ID=cds-WP_012477652.1;Parent=gene-LP088_RS14415;Dbxref=Genbank:WP_012477652.1;Name=WP_012477652.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS14415;product=hypothetical protein;protein_id=WP_012477652.1;transl_table=11 NZ_CP087815.1 RefSeq gene 10122 10892 . - . ID=gene-LP088_RS14420;Name=LP088_RS14420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14420 NZ_CP087815.1 Protein Homology CDS 10122 10892 . - 0 ID=cds-WP_264690433.1;Parent=gene-LP088_RS14420;Dbxref=Genbank:WP_264690433.1;Name=WP_264690433.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015803.2;locus_tag=LP088_RS14420;product=ShlB/FhaC/HecB family hemolysin secretion/activation protein;protein_id=WP_264690433.1;transl_table=11 NZ_CP087815.1 RefSeq gene 10880 11932 . - . ID=gene-LP088_RS14425;Name=LP088_RS14425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14425 NZ_CP087815.1 Protein Homology CDS 10880 11932 . - 0 ID=cds-WP_264690434.1;Parent=gene-LP088_RS14425;Dbxref=Genbank:WP_264690434.1;Name=WP_264690434.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015803.2;locus_tag=LP088_RS14425;product=POTRA domain-containing protein;protein_id=WP_264690434.1;transl_table=11 NZ_CP087815.1 RefSeq gene 12430 12663 . - . ID=gene-LP088_RS14430;Name=LP088_RS14430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14430;old_locus_tag=LP088_14295 NZ_CP087815.1 Protein Homology CDS 12430 12663 . - 0 ID=cds-WP_012477655.1;Parent=gene-LP088_RS14430;Dbxref=Genbank:WP_012477655.1;Name=WP_012477655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004676033.1;locus_tag=LP088_RS14430;product=DUF1548 domain-containing protein;protein_id=WP_012477655.1;transl_table=11 NZ_CP087815.1 RefSeq gene 12660 13289 . - . ID=gene-LP088_RS14435;Name=LP088_RS14435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14435;old_locus_tag=LP088_14300 NZ_CP087815.1 Protein Homology CDS 12660 13289 . - 0 ID=cds-WP_012477656.1;Parent=gene-LP088_RS14435;Dbxref=Genbank:WP_012477656.1;Name=WP_012477656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016658925.1;locus_tag=LP088_RS14435;product=AAA family ATPase;protein_id=WP_012477656.1;transl_table=11 NZ_CP087815.1 RefSeq gene 13565 14827 . - . ID=gene-LP088_RS14440;Name=LP088_RS14440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14440;old_locus_tag=LP088_14305 NZ_CP087815.1 Protein Homology CDS 13565 14827 . - 0 ID=cds-WP_012477657.1;Parent=gene-LP088_RS14440;Dbxref=Genbank:WP_012477657.1;Name=WP_012477657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005546745.1;locus_tag=LP088_RS14440;product=ATP-binding protein;protein_id=WP_012477657.1;transl_table=11 NZ_CP087815.1 RefSeq gene 14917 15111 . - . ID=gene-LP088_RS14445;Name=LP088_RS14445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14445;old_locus_tag=LP088_14310 NZ_CP087815.1 GeneMarkS-2+ CDS 14917 15111 . - 0 ID=cds-WP_162860471.1;Parent=gene-LP088_RS14445;Dbxref=Genbank:WP_162860471.1;Name=WP_162860471.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS14445;product=hypothetical protein;protein_id=WP_162860471.1;transl_table=11 NZ_CP087815.1 RefSeq gene 15069 15347 . - . ID=gene-LP088_RS14450;Name=LP088_RS14450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14450;old_locus_tag=LP088_14315 NZ_CP087815.1 GeneMarkS-2+ CDS 15069 15347 . - 0 ID=cds-WP_112742860.1;Parent=gene-LP088_RS14450;Dbxref=Genbank:WP_112742860.1;Name=WP_112742860.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS14450;product=hypothetical protein;protein_id=WP_112742860.1;transl_table=11 NZ_CP087815.1 RefSeq gene 15364 17004 . - . ID=gene-LP088_RS14455;Name=LP088_RS14455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14455;old_locus_tag=LP088_14320 NZ_CP087815.1 Protein Homology CDS 15364 17004 . - 0 ID=cds-WP_112742861.1;Parent=gene-LP088_RS14455;Dbxref=Genbank:WP_112742861.1;Name=WP_112742861.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015397.2;locus_tag=LP088_RS14455;product=relaxase/mobilization nuclease domain-containing protein;protein_id=WP_112742861.1;transl_table=11 NZ_CP087815.1 RefSeq gene 17006 17251 . - . ID=gene-LP088_RS14460;Name=LP088_RS14460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14460;old_locus_tag=LP088_14325 NZ_CP087815.1 Protein Homology CDS 17006 17251 . - 0 ID=cds-WP_112742862.1;Parent=gene-LP088_RS14460;Dbxref=Genbank:WP_112742862.1;Name=WP_112742862.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017524.2;locus_tag=LP088_RS14460;product=plasmid mobilization relaxosome protein MobC;protein_id=WP_112742862.1;transl_table=11 NZ_CP087815.1 RefSeq gene 17932 18273 . + . ID=gene-LP088_RS14465;Name=LP088_RS14465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14465;old_locus_tag=LP088_14330 NZ_CP087815.1 GeneMarkS-2+ CDS 17932 18273 . + 0 ID=cds-WP_012477660.1;Parent=gene-LP088_RS14465;Dbxref=Genbank:WP_012477660.1;Name=WP_012477660.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS14465;product=hypothetical protein;protein_id=WP_012477660.1;transl_table=11 NZ_CP087815.1 RefSeq gene 18318 19277 . - . ID=gene-LP088_RS14470;Name=LP088_RS14470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14470;old_locus_tag=LP088_14335 NZ_CP087815.1 Protein Homology CDS 18318 19277 . - 0 ID=cds-WP_264676363.1;Parent=gene-LP088_RS14470;Dbxref=Genbank:WP_264676363.1;Name=WP_264676363.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012464.2;locus_tag=LP088_RS14470;product=recombinase family protein;protein_id=WP_264676363.1;transl_table=11 NZ_CP087815.1 RefSeq gene 19422 20600 . - . ID=gene-LP088_RS14475;Name=repM;gbkey=Gene;gene=repM;gene_biotype=protein_coding;locus_tag=LP088_RS14475;old_locus_tag=LP088_14340 NZ_CP087815.1 Protein Homology CDS 19422 20600 . - 0 ID=cds-WP_012477662.1;Parent=gene-LP088_RS14475;Dbxref=Genbank:WP_012477662.1;Name=WP_012477662.1;Ontology_term=GO:0006270,GO:0003887;gbkey=CDS;gene=repM;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: protein motif:HMM:NF038290.1;locus_tag=LP088_RS14475;product=replication initiation protein RepM;protein_id=WP_012477662.1;transl_table=11 NZ_CP087815.1 RefSeq gene 21174 29297 . + . ID=gene-LP088_RS14480;Name=LP088_RS14480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14480;old_locus_tag=LP088_14345 NZ_CP087815.1 Protein Homology CDS 21174 29297 . + 0 ID=cds-WP_264676364.1;Parent=gene-LP088_RS14480;Dbxref=Genbank:WP_264676364.1;Name=WP_264676364.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017658.2;locus_tag=LP088_RS14480;product=filamentous hemagglutinin N-terminal domain-containing protein;protein_id=WP_264676364.1;transl_table=11 NZ_CP087815.1 RefSeq gene 29294 29638 . + . ID=gene-LP088_RS14485;Name=LP088_RS14485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14485;old_locus_tag=LP088_14350 NZ_CP087815.1 Protein Homology CDS 29294 29638 . + 0 ID=cds-WP_264676351.1;Parent=gene-LP088_RS14485;Dbxref=Genbank:WP_264676351.1;Name=WP_264676351.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024508.2;locus_tag=LP088_RS14485;product=DUF3969 family protein;protein_id=WP_264676351.1;transl_table=11 NZ_CP087815.1 RefSeq gene 29690 30490 . + . ID=gene-LP088_RS14490;Name=LP088_RS14490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14490;old_locus_tag=LP088_14355 NZ_CP087815.1 Protein Homology CDS 29690 30490 . + 0 ID=cds-WP_264676352.1;Parent=gene-LP088_RS14490;Dbxref=Genbank:WP_264676352.1;Name=WP_264676352.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026867.2;locus_tag=LP088_RS14490;product=polymorphic toxin type 24 domain-containing protein;protein_id=WP_264676352.1;transl_table=11 NZ_CP087815.1 RefSeq gene 30491 30955 . + . ID=gene-LP088_RS14495;Name=LP088_RS14495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14495;old_locus_tag=LP088_14360 NZ_CP087815.1 GeneMarkS-2+ CDS 30491 30955 . + 0 ID=cds-WP_112742863.1;Parent=gene-LP088_RS14495;Dbxref=Genbank:WP_112742863.1;Name=WP_112742863.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS14495;product=hypothetical protein;protein_id=WP_112742863.1;transl_table=11 NZ_CP087815.1 RefSeq gene 31167 32558 . + . ID=gene-LP088_RS14500;Name=LP088_RS14500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14500;old_locus_tag=LP088_14365 NZ_CP087815.1 GeneMarkS-2+ CDS 31167 32558 . + 0 ID=cds-WP_264676353.1;Parent=gene-LP088_RS14500;Dbxref=Genbank:WP_264676353.1;Name=WP_264676353.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS14500;product=hypothetical protein;protein_id=WP_264676353.1;transl_table=11 NZ_CP087815.1 RefSeq gene 32545 33048 . + . ID=gene-LP088_RS14505;Name=LP088_RS14505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14505;old_locus_tag=LP088_14370 NZ_CP087815.1 GeneMarkS-2+ CDS 32545 33048 . + 0 ID=cds-WP_115368553.1;Parent=gene-LP088_RS14505;Dbxref=Genbank:WP_115368553.1;Name=WP_115368553.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS14505;product=hypothetical protein;protein_id=WP_115368553.1;transl_table=11 NZ_CP087815.1 RefSeq gene 33109 33618 . + . ID=gene-LP088_RS14510;Name=LP088_RS14510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14510;old_locus_tag=LP088_14375 NZ_CP087815.1 GeneMarkS-2+ CDS 33109 33618 . + 0 ID=cds-WP_264676354.1;Parent=gene-LP088_RS14510;Dbxref=Genbank:WP_264676354.1;Name=WP_264676354.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS14510;product=hypothetical protein;protein_id=WP_264676354.1;transl_table=11 NZ_CP087815.1 RefSeq gene 33680 34537 . + . ID=gene-LP088_RS14515;Name=LP088_RS14515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14515;old_locus_tag=LP088_14380 NZ_CP087815.1 Protein Homology CDS 33680 34537 . + 0 ID=cds-WP_264676355.1;Parent=gene-LP088_RS14515;Dbxref=Genbank:WP_264676355.1;Name=WP_264676355.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025792.2;locus_tag=LP088_RS14515;product=EndoU domain-containing protein;protein_id=WP_264676355.1;transl_table=11 NZ_CP087815.1 RefSeq gene 34549 34869 . + . ID=gene-LP088_RS14520;Name=LP088_RS14520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14520;old_locus_tag=LP088_14385 NZ_CP087815.1 GeneMarkS-2+ CDS 34549 34869 . + 0 ID=cds-WP_012477666.1;Parent=gene-LP088_RS14520;Dbxref=Genbank:WP_012477666.1;Name=WP_012477666.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS14520;product=hypothetical protein;protein_id=WP_012477666.1;transl_table=11 NZ_CP087815.1 RefSeq gene 35155 45363 . + . ID=gene-LP088_RS14525;Name=LP088_RS14525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14525;old_locus_tag=LP088_14390 NZ_CP087815.1 Protein Homology CDS 35155 45363 . + 0 ID=cds-WP_264676356.1;Parent=gene-LP088_RS14525;Dbxref=Genbank:WP_264676356.1;Name=WP_264676356.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024728.2;locus_tag=LP088_RS14525;product=hemagglutinin repeat-containing protein;protein_id=WP_264676356.1;transl_table=11 NZ_CP087815.1 RefSeq gene 45360 45845 . + . ID=gene-LP088_RS14530;Name=LP088_RS14530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14530;old_locus_tag=LP088_14395 NZ_CP087815.1 GeneMarkS-2+ CDS 45360 45845 . + 0 ID=cds-WP_012477668.1;Parent=gene-LP088_RS14530;Dbxref=Genbank:WP_012477668.1;Name=WP_012477668.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS14530;product=hypothetical protein;protein_id=WP_012477668.1;transl_table=11 NZ_CP087815.1 RefSeq gene 45956 46252 . + . ID=gene-LP088_RS14345;Name=LP088_RS14345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14345;old_locus_tag=LP088_14220 NZ_CP087815.1 GeneMarkS-2+ CDS 45956 46252 . + 0 ID=cds-WP_264676357.1;Parent=gene-LP088_RS14345;Dbxref=Genbank:WP_264676357.1;Name=WP_264676357.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS14345;product=hypothetical protein;protein_id=WP_264676357.1;transl_table=11 ##sequence-region NZ_CP087816.1 1 32546 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=476 NZ_CP087816.1 RefSeq region 1 32546 . + . ID=NZ_CP087816.1:1..32546;Dbxref=taxon:476;Is_circular=true;Name=unnamed2;collection-date=2015;country=USA: Nebraska;gbkey=Src;genome=plasmid;mol_type=genomic DNA;nat-host=Bovine;plasmid-name=unnamed2;strain=SAM109238 NZ_CP087816.1 RefSeq gene 408 1250 . - . ID=gene-LP088_RS14540;Name=LP088_RS14540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14540;old_locus_tag=LP088_14405 NZ_CP087816.1 Protein Homology CDS 408 1250 . - 0 ID=cds-WP_264676380.1;Parent=gene-LP088_RS14540;Dbxref=Genbank:WP_264676380.1;Name=WP_264676380.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015487.2;locus_tag=LP088_RS14540;product=TrbG/VirB9 family P-type conjugative transfer protein;protein_id=WP_264676380.1;transl_table=11 NZ_CP087816.1 RefSeq gene 1247 1966 . - . ID=gene-LP088_RS14545;Name=LP088_RS14545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14545;old_locus_tag=LP088_14410 NZ_CP087816.1 Protein Homology CDS 1247 1966 . - 0 ID=cds-WP_264676381.1;Parent=gene-LP088_RS14545;Dbxref=Genbank:WP_264676381.1;Name=WP_264676381.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016238.2;locus_tag=LP088_RS14545;product=type IV secretion system protein;protein_id=WP_264676381.1;transl_table=11 NZ_CP087816.1 RefSeq gene 1968 2189 . - . ID=gene-LP088_RS14550;Name=LP088_RS14550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14550;old_locus_tag=LP088_14415 NZ_CP087816.1 GeneMarkS-2+ CDS 1968 2189 . - 0 ID=cds-WP_264676382.1;Parent=gene-LP088_RS14550;Dbxref=Genbank:WP_264676382.1;Name=WP_264676382.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS14550;product=hypothetical protein;protein_id=WP_264676382.1;transl_table=11 NZ_CP087816.1 RefSeq gene 2240 3457 . - . ID=gene-LP088_RS14555;Name=LP088_RS14555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14555;old_locus_tag=LP088_14420 NZ_CP087816.1 Protein Homology CDS 2240 3457 . - 0 ID=cds-WP_264676383.1;Parent=gene-LP088_RS14555;Dbxref=Genbank:WP_264676383.1;Name=WP_264676383.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016491.2;locus_tag=LP088_RS14555;product=type IV secretion system protein;protein_id=WP_264676383.1;transl_table=11 NZ_CP087816.1 RefSeq gene 3478 3705 . - . ID=gene-LP088_RS14560;Name=LP088_RS14560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14560;old_locus_tag=LP088_14425 NZ_CP087816.1 Protein Homology CDS 3478 3705 . - 0 ID=cds-WP_264676384.1;Parent=gene-LP088_RS14560;Dbxref=Genbank:WP_264676384.1;Name=WP_264676384.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033894.1;locus_tag=LP088_RS14560;product=EexN family lipoprotein;protein_id=WP_264676384.1;transl_table=11 NZ_CP087816.1 RefSeq gene 3759 4445 . - . ID=gene-LP088_RS14565;Name=LP088_RS14565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14565;old_locus_tag=LP088_14430 NZ_CP087816.1 Protein Homology CDS 3759 4445 . - 0 ID=cds-WP_264676385.1;Parent=gene-LP088_RS14565;Dbxref=Genbank:WP_264676385.1;Name=WP_264676385.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019608.2;locus_tag=LP088_RS14565;product=hypothetical protein;protein_id=WP_264676385.1;transl_table=11 NZ_CP087816.1 RefSeq gene 4503 6932 . - . ID=gene-LP088_RS14570;Name=LP088_RS14570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14570;old_locus_tag=LP088_14435 NZ_CP087816.1 Protein Homology CDS 4503 6932 . - 0 ID=cds-WP_264676386.1;Parent=gene-LP088_RS14570;Dbxref=Genbank:WP_264676386.1;Name=WP_264676386.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00929.1;locus_tag=LP088_RS14570;product=VirB4 family type IV secretion/conjugal transfer ATPase;protein_id=WP_264676386.1;transl_table=11 NZ_CP087816.1 RefSeq gene 6941 7264 . - . ID=gene-LP088_RS14575;Name=LP088_RS14575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14575;old_locus_tag=LP088_14440 NZ_CP087816.1 Protein Homology CDS 6941 7264 . - 0 ID=cds-WP_264676387.1;Parent=gene-LP088_RS14575;Dbxref=Genbank:WP_264676387.1;Name=WP_264676387.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016957.2;locus_tag=LP088_RS14575;product=VirB3 family type IV secretion system protein;protein_id=WP_264676387.1;transl_table=11 NZ_CP087816.1 RefSeq gene 7266 7601 . - . ID=gene-LP088_RS14580;Name=LP088_RS14580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14580;old_locus_tag=LP088_14445 NZ_CP087816.1 Protein Homology CDS 7266 7601 . - 0 ID=cds-WP_264676388.1;Parent=gene-LP088_RS14580;Dbxref=Genbank:WP_264676388.1;Name=WP_264676388.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016820.2;locus_tag=LP088_RS14580;product=TrbC/VirB2 family protein;protein_id=WP_264676388.1;transl_table=11 NZ_CP087816.1 RefSeq gene 7625 8350 . - . ID=gene-LP088_RS14585;Name=LP088_RS14585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14585;old_locus_tag=LP088_14450 NZ_CP087816.1 Protein Homology CDS 7625 8350 . - 0 ID=cds-WP_264676389.1;Parent=gene-LP088_RS14585;Dbxref=Genbank:WP_264676389.1;Name=WP_264676389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005253288.1;locus_tag=LP088_RS14585;product=lytic transglycosylase domain-containing protein;protein_id=WP_264676389.1;transl_table=11 NZ_CP087816.1 RefSeq gene 8343 8633 . - . ID=gene-LP088_RS14590;Name=LP088_RS14590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14590;old_locus_tag=LP088_14455 NZ_CP087816.1 GeneMarkS-2+ CDS 8343 8633 . - 0 ID=cds-WP_264690437.1;Parent=gene-LP088_RS14590;Dbxref=Genbank:WP_264690437.1;Name=WP_264690437.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS14590;product=hypothetical protein;protein_id=WP_264690437.1;transl_table=11 NZ_CP087816.1 RefSeq gene 8723 8911 . - . ID=gene-LP088_RS14595;Name=LP088_RS14595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14595;old_locus_tag=LP088_14460 NZ_CP087816.1 Protein Homology CDS 8723 8911 . - 0 ID=cds-WP_264676391.1;Parent=gene-LP088_RS14595;Dbxref=Genbank:WP_264676391.1;Name=WP_264676391.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024064.2;locus_tag=LP088_RS14595;product=ribbon-helix-helix domain-containing protein;protein_id=WP_264676391.1;transl_table=11 NZ_CP087816.1 RefSeq gene 9357 10916 . + . ID=gene-LP088_RS14600;Name=LP088_RS14600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14600;old_locus_tag=LP088_14465 NZ_CP087816.1 Protein Homology CDS 9357 10916 . + 0 ID=cds-WP_264676392.1;Parent=gene-LP088_RS14600;Dbxref=Genbank:WP_264676392.1;Name=WP_264676392.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013235.2;locus_tag=LP088_RS14600;product=replication initiation protein;protein_id=WP_264676392.1;transl_table=11 NZ_CP087816.1 RefSeq gene 10983 11123 . + . ID=gene-LP088_RS14605;Name=LP088_RS14605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14605;old_locus_tag=LP088_14470 NZ_CP087816.1 GeneMarkS-2+ CDS 10983 11123 . + 0 ID=cds-WP_264676393.1;Parent=gene-LP088_RS14605;Dbxref=Genbank:WP_264676393.1;Name=WP_264676393.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS14605;product=hypothetical protein;protein_id=WP_264676393.1;transl_table=11 NZ_CP087816.1 RefSeq gene 11525 11884 . - . ID=gene-LP088_RS14610;Name=LP088_RS14610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14610;old_locus_tag=LP088_14475 NZ_CP087816.1 GeneMarkS-2+ CDS 11525 11884 . - 0 ID=cds-WP_264676394.1;Parent=gene-LP088_RS14610;Dbxref=Genbank:WP_264676394.1;Name=WP_264676394.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS14610;product=hypothetical protein;protein_id=WP_264676394.1;transl_table=11 NZ_CP087816.1 RefSeq gene 11908 12297 . - . ID=gene-LP088_RS14615;Name=LP088_RS14615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14615;old_locus_tag=LP088_14480 NZ_CP087816.1 GeneMarkS-2+ CDS 11908 12297 . - 0 ID=cds-WP_264676395.1;Parent=gene-LP088_RS14615;Dbxref=Genbank:WP_264676395.1;Name=WP_264676395.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS14615;product=hypothetical protein;protein_id=WP_264676395.1;transl_table=11 NZ_CP087816.1 RefSeq gene 12359 13048 . - . ID=gene-LP088_RS14620;Name=LP088_RS14620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14620;old_locus_tag=LP088_14485 NZ_CP087816.1 GeneMarkS-2+ CDS 12359 13048 . - 0 ID=cds-WP_264676396.1;Parent=gene-LP088_RS14620;Dbxref=Genbank:WP_264676396.1;Name=WP_264676396.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS14620;product=hypothetical protein;protein_id=WP_264676396.1;transl_table=11 NZ_CP087816.1 RefSeq gene 13052 13462 . - . ID=gene-LP088_RS14625;Name=LP088_RS14625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14625;old_locus_tag=LP088_14490 NZ_CP087816.1 GeneMarkS-2+ CDS 13052 13462 . - 0 ID=cds-WP_264676397.1;Parent=gene-LP088_RS14625;Dbxref=Genbank:WP_264676397.1;Name=WP_264676397.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS14625;product=hypothetical protein;protein_id=WP_264676397.1;transl_table=11 NZ_CP087816.1 RefSeq gene 13873 14235 . + . ID=gene-LP088_RS14630;Name=LP088_RS14630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14630;old_locus_tag=LP088_14495 NZ_CP087816.1 GeneMarkS-2+ CDS 13873 14235 . + 0 ID=cds-WP_264676365.1;Parent=gene-LP088_RS14630;Dbxref=Genbank:WP_264676365.1;Name=WP_264676365.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS14630;product=hypothetical protein;protein_id=WP_264676365.1;transl_table=11 NZ_CP087816.1 RefSeq gene 14237 15772 . + . ID=gene-LP088_RS14635;Name=LP088_RS14635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14635;old_locus_tag=LP088_14500 NZ_CP087816.1 Protein Homology CDS 14237 15772 . + 0 ID=cds-WP_264676366.1;Parent=gene-LP088_RS14635;Dbxref=Genbank:WP_264676366.1;Name=WP_264676366.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021897.2;locus_tag=LP088_RS14635;product=type IV secretion system DNA-binding domain-containing protein;protein_id=WP_264676366.1;transl_table=11 NZ_CP087816.1 RefSeq gene 15773 19102 . + . ID=gene-LP088_RS14640;Name=LP088_RS14640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14640;old_locus_tag=LP088_14505 NZ_CP087816.1 Protein Homology CDS 15773 19102 . + 0 ID=cds-WP_264676367.1;Parent=gene-LP088_RS14640;Dbxref=Genbank:WP_264676367.1;Name=WP_264676367.1;Ontology_term=GO:0006259,GO:0004386;gbkey=CDS;go_function=helicase activity|0004386||IEA;go_process=DNA metabolic process|0006259||IEA;inference=COORDINATES: protein motif:HMM:TIGR02686.1;locus_tag=LP088_RS14640;product=conjugative relaxase;protein_id=WP_264676367.1;transl_table=11 NZ_CP087816.1 RefSeq gene 19191 19457 . + . ID=gene-LP088_RS14645;Name=LP088_RS14645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14645;old_locus_tag=LP088_14510 NZ_CP087816.1 GeneMarkS-2+ CDS 19191 19457 . + 0 ID=cds-WP_264676368.1;Parent=gene-LP088_RS14645;Dbxref=Genbank:WP_264676368.1;Name=WP_264676368.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS14645;product=hypothetical protein;protein_id=WP_264676368.1;transl_table=11 NZ_CP087816.1 RefSeq gene 19459 20643 . + . ID=gene-LP088_RS14650;Name=LP088_RS14650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14650;old_locus_tag=LP088_14515 NZ_CP087816.1 Protein Homology CDS 19459 20643 . + 0 ID=cds-WP_264676369.1;Parent=gene-LP088_RS14650;Dbxref=Genbank:WP_264676369.1;Name=WP_264676369.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018154.2;locus_tag=LP088_RS14650;product=zeta toxin family protein;protein_id=WP_264676369.1;transl_table=11 NZ_CP087816.1 RefSeq gene 20714 20893 . + . ID=gene-LP088_RS14655;Name=LP088_RS14655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14655;old_locus_tag=LP088_14520 NZ_CP087816.1 Protein Homology CDS 20714 20893 . + 0 ID=cds-WP_264676370.1;Parent=gene-LP088_RS14655;Dbxref=Genbank:WP_264676370.1;Name=WP_264676370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444563.1;locus_tag=LP088_RS14655;product=hypothetical protein;protein_id=WP_264676370.1;transl_table=11 NZ_CP087816.1 RefSeq gene 20948 21979 . + . ID=gene-LP088_RS14660;Name=LP088_RS14660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14660;old_locus_tag=LP088_14525 NZ_CP087816.1 Protein Homology CDS 20948 21979 . + 0 ID=cds-WP_264676371.1;Parent=gene-LP088_RS14660;Dbxref=Genbank:WP_264676371.1;Name=WP_264676371.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019371.2;locus_tag=LP088_RS14660;product=Abi family protein;protein_id=WP_264676371.1;transl_table=11 NZ_CP087816.1 RefSeq gene 22185 22583 . - . ID=gene-LP088_RS14665;Name=LP088_RS14665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14665;old_locus_tag=LP088_14530 NZ_CP087816.1 GeneMarkS-2+ CDS 22185 22583 . - 0 ID=cds-WP_264676372.1;Parent=gene-LP088_RS14665;Dbxref=Genbank:WP_264676372.1;Name=WP_264676372.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS14665;product=hypothetical protein;protein_id=WP_264676372.1;transl_table=11 NZ_CP087816.1 RefSeq gene 22741 23391 . + . ID=gene-LP088_RS14670;Name=LP088_RS14670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14670;old_locus_tag=LP088_14535 NZ_CP087816.1 Protein Homology CDS 22741 23391 . + 0 ID=cds-WP_264676373.1;Parent=gene-LP088_RS14670;Dbxref=Genbank:WP_264676373.1;Name=WP_264676373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001164604.1;locus_tag=LP088_RS14670;product=recombinase family protein;protein_id=WP_264676373.1;transl_table=11 NZ_CP087816.1 RefSeq gene 23482 27054 . - . ID=gene-LP088_RS14675;Name=LP088_RS14675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14675;old_locus_tag=LP088_14540 NZ_CP087816.1 Protein Homology CDS 23482 27054 . - 0 ID=cds-WP_264676374.1;Parent=gene-LP088_RS14675;Dbxref=Genbank:WP_264676374.1;Name=WP_264676374.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037521.2;locus_tag=LP088_RS14675;product=zincin-like metallopeptidase domain-containing protein;protein_id=WP_264676374.1;transl_table=11 NZ_CP087816.1 RefSeq gene 27066 27275 . - . ID=gene-LP088_RS14680;Name=LP088_RS14680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14680;old_locus_tag=LP088_14545 NZ_CP087816.1 GeneMarkS-2+ CDS 27066 27275 . - 0 ID=cds-WP_264676375.1;Parent=gene-LP088_RS14680;Dbxref=Genbank:WP_264676375.1;Name=WP_264676375.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS14680;product=hypothetical protein;protein_id=WP_264676375.1;transl_table=11 NZ_CP087816.1 RefSeq gene 27466 27771 . - . ID=gene-LP088_RS14685;Name=LP088_RS14685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14685;old_locus_tag=LP088_14550 NZ_CP087816.1 GeneMarkS-2+ CDS 27466 27771 . - 0 ID=cds-WP_264676376.1;Parent=gene-LP088_RS14685;Dbxref=Genbank:WP_264676376.1;Name=WP_264676376.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS14685;product=hypothetical protein;protein_id=WP_264676376.1;transl_table=11 NZ_CP087816.1 RefSeq gene 27764 30022 . - . ID=gene-LP088_RS14690;Name=LP088_RS14690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14690;old_locus_tag=LP088_14555 NZ_CP087816.1 Protein Homology CDS 27764 30022 . - 0 ID=cds-WP_264676377.1;Parent=gene-LP088_RS14690;Dbxref=Genbank:WP_264676377.1;Name=WP_264676377.1;Ontology_term=GO:0006265,GO:0003677,GO:0003916;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004281998.1;locus_tag=LP088_RS14690;product=DNA topoisomerase;protein_id=WP_264676377.1;transl_table=11 NZ_CP087816.1 RefSeq gene 30022 30504 . - . ID=gene-LP088_RS14695;Name=LP088_RS14695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14695;old_locus_tag=LP088_14560 NZ_CP087816.1 GeneMarkS-2+ CDS 30022 30504 . - 0 ID=cds-WP_264676378.1;Parent=gene-LP088_RS14695;Dbxref=Genbank:WP_264676378.1;Name=WP_264676378.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS14695;product=hypothetical protein;protein_id=WP_264676378.1;transl_table=11 NZ_CP087816.1 RefSeq gene 30627 31655 . - . ID=gene-LP088_RS14700;Name=virB11;gbkey=Gene;gene=virB11;gene_biotype=protein_coding;locus_tag=LP088_RS14700;old_locus_tag=LP088_14565 NZ_CP087816.1 Protein Homology CDS 30627 31655 . - 0 ID=cds-WP_264676398.1;Parent=gene-LP088_RS14700;Dbxref=Genbank:WP_264676398.1;Name=WP_264676398.1;Ontology_term=GO:0044097,GO:0043684;gbkey=CDS;gene=virB11;go_component=type IV secretion system complex|0043684||IEA;go_process=secretion by the type IV secretion system|0044097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015857033.1;locus_tag=LP088_RS14700;product=P-type DNA transfer ATPase VirB11;protein_id=WP_264676398.1;transl_table=11 NZ_CP087816.1 RefSeq gene 31662 32396 . - . ID=gene-LP088_RS14705;Name=virB10;gbkey=Gene;gene=virB10;gene_biotype=protein_coding;locus_tag=LP088_RS14705;old_locus_tag=LP088_14570 NZ_CP087816.1 Protein Homology CDS 31662 32396 . - 0 ID=cds-WP_264690435.1;Parent=gene-LP088_RS14705;Dbxref=Genbank:WP_264690435.1;Name=WP_264690435.1;gbkey=CDS;gene=virB10;inference=COORDINATES: protein motif:HMM:NF038091.1;locus_tag=LP088_RS14705;product=type IV secretion system protein VirB10;protein_id=WP_264690435.1;transl_table=11 NZ_CP087816.1 RefSeq gene 32305 32970 . - . ID=gene-LP088_RS14535;Name=LP088_RS14535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LP088_RS14535;old_locus_tag=LP088_14400 NZ_CP087816.1 GeneMarkS-2+ CDS 32305 32970 . - 0 ID=cds-WP_264690436.1;Parent=gene-LP088_RS14535;Dbxref=Genbank:WP_264690436.1;Name=WP_264690436.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LP088_RS14535;product=hypothetical protein;protein_id=WP_264690436.1;transl_table=11 ###