JC861_RS20510 NONE
        dnaN NONE
JC861_RS20515 NONE
        recF NONE
        gyrB NONE
JC861_RS20500    6070 ..    6093 + -15.4  -5.40474   CTCTCTGAGACCTGA          TAAAGCCCGG ATTT CCGGGCTTTA           TTTTTTTCCGGCGAT 100 39
        nagK   15164 ..   15191 + -14.3   -3.0497   GCTGACCGGCATATA        TTTACCGCCTG CGGATA CAGGCGGTAAA         TATTAAAAATAATAT 100 36
JC861_RS00060   16398 ..   16412 +  -5.6  -2.87931   GACGCTGCGCTACAT               TCCGGA TCA TCCGGC               TATATGACCGGTACA  53 4
JC861_RS00065   18359 ..   18375 + -10.9  -3.83502   CGTGCTGCCCGTTTG              CCGGTAT TTA ATACCGG              TTTGCTGTGCGGCTG  84 56
        asnA   35909 ..   35926 +  -4.8  -4.21908   GTAATGGGACAGGGC             TACCGC ATGGAA GCGGTG              TTTTCCCTGCTGCTG  64 160
        rbsD NONE
        rbsA NONE
        rbsC NONE
        rbsB   43698 ..   43726 + -13.1  -3.30124   AGACTAACGATATCA        GCCTCCCCGGTAC TGT GTACCGGGGAGTA        TTGTCAGCAATAAGG 100 34
        rbsK   44661 ..   44675 +  -3.4  -3.24747   TGAAATTGATGCTTT               CCTTGC GGA GCGTGG               TTAATACTGTGGCGA  47 7
        rbsR   46140 ..   46155 +  -3.2  -4.08767   CGTAGCGGCGCAGAA              TCTGAG TAAC CGCAGA               TTTTGCCAGAATAGA  58 480
JC861_RS00210   49933 ..   49947 +  -5.6  -2.64973   AAATGAGCAGAGAGC               GTCTGC GAA GCTGAC               TAATGTCCCCTTCGT  52 87
JC861_RS00215   50063 ..   50093 +  -7.1   -2.7362   GTCATCTGCAAATAA      TGATTAAGCTGATT CAAG AGTCAGCTTAA-CA       ATTATGCTCTTTAAC  59 61
JC861_RS00220   53136 ..   53146 +  -6.8  -4.27316   GGCTTAACCTGACAA                 CACC GAA GGTG                 TTTTGAGTTGAGAGA  74 30
         rrf   53369 ..   53401 + -15.7  -2.71712   CCAGGTTATTATTAA      GTGAAGAAGCCACCC TTT GGGTGGCTTTTTTGC      GTTTGAGCGAAAGAA 100 35
        yghU   54418 ..   54446 + -17.6  -2.61628   ATTGATATTTCACCC        TTTCCCGGCAGA TGATT TCTGCCGGGAAA        TCCATTCCTGTTATT 100 36
JC861_RS00240 NONE
JC861_RS00245   58493 ..   58503 +  -2.4  -5.10933   GCTGGTACTATCCAG                 TCCG CCC CGGC                 TTTTATTTTGGATAA  74 239
JC861_RS00260   62577 ..   62592 +  -3.3  -3.51124   GTAATCCGCGGCAAA              TCATC CGGCGT GATGA               TGTTTCATCGTTAGT  49 37
JC861_RS00265   63129 ..   63157 + -10.1  -4.57218   TTTCGTTATTTTCAG        CCGGCAACCGGTA TTT TTCCGGGCGCCGG        TTTTCATTCTCTTAT 100 99
JC861_RS00270   63651 ..   63667 +  -3.7  -3.18571   GTTCTTAATTCCCGG              TTCGC ATCCATG GCGAA              TATATCTTTCACCCG  48 91
JC861_RS00275   65888 ..   65926 +  -3.2  -2.67055   CCCGTTCTGTTGTCG   TTCAGACCAAATACAGCT GGT AGTTATGTTTGAACTGAA   TGATATCCGTGTTGT  42 3
JC861_RS00280   66670 ..   66685 +  -3.2  -2.67401   AACAACGAAAAGTGG              CAGTCG TATG CAACTG               ATGTTATTACGTTTA  42 9
JC861_RS00285 NONE
        fhuB   69601 ..   69628 +  -4.8  -2.93585   GGATACAGCCGAAAG        GCAACTACGGCT TCCC GGTTGTAGTAGC         TGGTTTCGGATATAC  50 56
        rlmF   71036 ..   71048 +  -2.7  -4.44974   TATATCCGTGATCAA                TTAAG ATA CTTGA                TTTTATGACGTTTGA  61 281
JC861_RS00345 NONE
JC861_RS00350   79078 ..   79096 +  -3.2  -2.90472   TGCTTACATTATATG             ATAAGTAA ATT TTACTTAA             GGTTTTTTATATGTT  44 18
JC861_RS00355 NONE
JC861_RS00360 NONE
        wecB   82717 ..   82733 +  -2.2  -3.54146   TGATATATTATTCTC              CTTCCA TATTC TGGGGG              TATTTAGTTAGAAAA  47 344
JC861_RS00375   84169 ..   84179 +  -3.2  -3.41448   TGTGTTGGTACGAGG                 GGGA GAT TTCC                 GTTTCTTTATTAATA  49 196
JC861_RS00380 NONE
JC861_RS00385 NONE
JC861_RS00390 NONE
JC861_RS00395   88526 ..   88539 +  -3.1  -3.26841   AACCGTGACCAGTTT               TGTAG ACCA CTACG                TATTGAATTTATTTA  47 257
JC861_RS00400   88910 ..   88939 +  -7.1  -2.94232   ATCCTGAACTTTTTG       CAAACTTCGGATG AATT CCTCCGGAGTCTG        GTTATTTAACGAAGA  61 89
        prlC NONE
        rsmJ   94737 ..   94750 +  -5.2   -4.7254   TTGCGCCTTCCGCCA               CGGC TTTAAC GCCG                TTTTTGATCAGCACT  75 466
        uspB   97274 ..   97293 + -12.2  -4.35524   CGGATACGAAAAAAA            GCCTGACA CATG TGTCAGGC             TTTTCAGTTTCAGAG 100 49
JC861_RS00450  100485 ..  100501 +  -9.4  -5.55698   TCCAGTGTTTATTTA              GCCAGC CCAGT GCTGGC              TTTTTTTCCCTTATC 100 240
JC861_RS00455  100883 ..  100897 +  -5.8  -2.78712   TCCTCGCAATGTTTA               TTCAAA TTT TTTGAA               TCCTTGCGTTAAACC  53 44
JC861_RS00460  101683 ..  101706 + -13.8  -2.77148   ACAATAAAACAGAAA          GCCCCGGATC ATCT GACCCGGGGC           TACTGTGTTGCTCAC  95 34
        nudE  108029 ..  108046 + -12.7  -2.87444   GCGATTGAAAAAAAA             GGCTGCC CTCA GGCAGCC              CTTGTCTGTTTATCA  89 108
JC861_RS00495 NONE
JC861_RS20545  112431 ..  112445 +  -5.6  -2.80935   ATTTGAGGCGCATTA               TCCGGC GCT GGCGGA               TCTGCTGGATACCCT  53 35
JC861_RS00510  113877 ..  113935 + -11.9  -2.60032   CCTGATTTTCAGATC GCGCCTTATGTTTCTGT-ACAGCTCCTG TTTG CGGGAGGATTCACGGAAATATAAGGCGC GGTTTTTCGCAGGCG  83 234
        aroK  114684 ..  114708 +  -4.3  -4.66537   TGCAAATCAAATCAT          TGAACTGTTAG AAA CCAACAGTTAA          TTTTATATTACCGGC  68 1
        aroB  115897 ..  115917 + -11.1  -2.90232   TTACACTACGCATTA            TGACGCGCG CAC CGGGCGTCA            GTTCTCTTCTGTTAT  77 100
JC861_RS00525  116937 ..  116947 +  -5.4  -3.88498   TAAACACGGATTCCG                 TCAG GTG CTGA                 TTTGCTGTCTGAAAC  61 38
         dam  117831 ..  117848 +  -6.9  -2.63073   TACCGCGGACAGTAA             GCCGTTG AACC CGGCGGC              GTCTTATTAAGAGGA  56 26
         rpe NONE
JC861_RS00540  119754 ..  119771 +    -4  -2.80071   AGCATCTGGAGCTGA             GCCGCG ATATCG CGCAGC              GTTTCAATGCGATTT  46 518
JC861_RS00555 NONE
        dmsB NONE
JC861_RS00565  125485 ..  125538 + -12.6  -3.93367   CTGTCCTGATACAGT CAGCGCGTATCCTGTTACTGTTTTC CGTCC GGAAACCGTGGCAGGATACGC-CGG TATTTTATTGCGGGG 100 32
        dmsD  126200 ..  126225 + -18.3  -5.40072   GCATCAGAGTAAAAA         GCGCCTCCGGT CTGC ACCGGGGGCGC          TTTTTTTACGGCGGA 100 50
JC861_RS00580  127581 ..  127608 +  -8.4   -2.6927   TAACCGGCTGTCCGT        TACTCTCCGCAG AGGA CTGCGGAGAACA         TCATGTATCACGACT  63 97
JC861_RS00585 NONE
JC861_RS00590  131195 ..  131205 +  -8.2  -2.72031   GCAGAGACAACCGCG                 CCGG ACA CCGG                 TGATGTCATTGTGGT  63 201
JC861_RS00595 NONE
JC861_RS00600 NONE
JC861_RS00605 NONE
JC861_RS00610  136169 ..  136185 +  -5.9  -3.62096   AACCGAATAACCGGC              GGTTGAA ATC TTCAATC              TTTCCGCTGGTCAGG  60 31
         acs NONE
JC861_RS00630 NONE
JC861_RS00635  141906 ..  141932 +   -18  -5.35224   CTGACAGAGGTGACA         GCGCGGTTTCCG GCC CGGGGACCGCGC         TTTTCTTTTTCTCCG 100 37
JC861_RS00640  142603 ..  142629 + -13.6  -2.64616   TCAGCTGAATACCGG         CCGCCGCCCGGA TAA TCCGGACGGCGC         TGATATCAGTCAAAC  93 33
JC861_RS00690 NONE
JC861_RS00695  156139 ..  156174 + -12.7  -4.06903   ATCATAATTATTGGT    GTTGTCACTCATCTG TCCTGC CGGATGAGTGACATC     TTTGGTTTACCAGTT 100 34
        uxuA  157685 ..  157699 +  -5.6  -2.78384   ATCTCTTCCGCAGCC               TGCTCC CCG GGAGCC               TGTAATGGAAAAGAA  53 74
JC861_RS00705  159180 ..  159190 +    -4  -2.54371   CTGTAATCCCGGAGA                 GTTT ATG AAAC                 AGTTTCTTTGCGAAG  45 35
        uxaC NONE
JC861_RS00715 NONE
JC861_RS00720  162239 ..  162265 + -15.9  -2.74926   GCATTTTTATTGTTC         CGGCAGCGGAG CCTGT CTCTGCTGCCG         TCCTGTCTGCTTTCT 100 41
        atoS NONE
        atoC  165667 ..  165690 +  -9.6  -5.95286   CATTTTAAATAAAAA          CACGGTGTAA ATAA TTTCACCGTG           TTTTTTGTTTTTACT 100 81
        atoD NONE
JC861_RS00740 NONE
JC861_RS00745 NONE
JC861_RS00750  169798 ..  169824 + -13.7  -5.10077   ACCGCCGTATATTCA         GCCGGTGTCAG GATAA CTGTCACCGGC         TTTTTTGCGCTGTTT 100 53
JC861_RS00755  170915 ..  170958 + -12.5  -4.63044   GCGGTGCTGAGTTTT TTAACTTTCCGGAACCGGT ATTGTG ACCGGTTCCGGGGTGTTAC TTTATTTCTGTCAGT 100 281
JC861_RS20550  174429 ..  174442 +  -3.8  -2.91735   ACATCAGGCAGAGTT               TCGC ATTAAA GCGA                TGTGTCGCGTGTTGA  46 60
JC861_RS20555 NONE
JC861_RS20560  175534 ..  175561 +  -8.6  -4.93547   AAATAATAATTACAT        CTATATGATAAG GTTA CTTATCATGTGG         TTTTTCCTTAATTGC 100 304
JC861_RS00775  177357 ..  177383 + -10.8  -2.84051   TAACCCTGGTTTTCA         TCCCCGCCGG CAGCTGT CCGGCGGGCA         GTTTCATACGCATCG  77 38
JC861_RS00790  182006 ..  182024 +  -3.1  -3.76771   CCTGCCTTGTGCTAT             CATCCTG ATACA CAGCATG             TTGTATTACTCTTAT  53 142
JC861_RS00795  183103 ..  183126 + -16.8   -3.8822   TTTCTGATAAAAAAA          GCCCGGTAAC ATCA GTTACCGGGC           TTTGCATTTGCTGTG 100 51
        poxB  186753 ..  186768 + -10.4  -5.53991   AGCAGAGGTAAAAAA              TGCCGC ATGT GCGGCA               TTTTTTTGCTCAGTA 100 44
JC861_RS00815  189487 ..  189500 +  -8.1  -5.76633   AACCGGTCCGGAAAA               GCGCT GAAA AGCGC                TTTTTTTGTGTCTGC 100 45
JC861_RS00820  190320 ..  190364 + -13.7  -3.46509   TCCCGGCGCTGAGGT GATAAAAAAACAGACCGGCTT TGT GAGCCGGTCTGCGTTGTTATC TTACTGTTCTTCCCG 100 29
        bioH  196365 ..  196390 +  -4.6  -4.12198   GGTAATCAGAAAAAA         GCCGGTCAGT TTAATC ACCAACCGGC          TTTTGCCGAATTCTG  63 36
        greB  203663 ..  203677 +  -4.2  -3.18264   ATGTCATTTTGTCTA               TCCGCT ATC AGCCGA               TTGCTGAATAGGCAC  49 0
        ompR NONE
        envZ  205833 ..  205860 +    -7  -5.32396   TGTGGCTGTCATAAA        TCCCTGCGGTAA GCGA TTATCCCGGGGA         TTTTGTTTTTAATCT  89 69
        pstS  207165 ..  207187 + -19.2  -3.06696   GAATTACCAGTAATT           GATCCCCCCG TAC CGGGGGGATC           TGTGTTAAAGACGGA 100 65
        pstC NONE
        pstA NONE
        pstB NONE
        phoU  210706 ..  210725 + -11.4   -4.2687   CCCGTTTTGATTTGA            CCCTGGAG TTAA CTCCGGGG             TTTATACTTTTTAAA 100 84
JC861_RS00925  211032 ..  211054 + -11.3  -4.27584   AATCCGTAAGGCAAA           TGCCGGTCA TCACC TGACCGGCG           TTTTCAATTCAGCGT 100 32
JC861_RS00955  218201 ..  218218 + -11.3  -3.26546   TATTATCTGATTCAG             GCCTCAC TCCG GTGAGGC              TTCCTGCATTTCTGC  86 49
JC861_RS00960 NONE
JC861_RS00965  219784 ..  219807 +  -5.3  -4.08767   TTTGATCAGTGACAA          TCCCGGTACA GTTAA TG-GCCGGGA          TTTTCCCGCAATGAA  65 42
JC861_RS00970  221260 ..  221281 + -12.3  -5.77988   TCAGATGAGAAAAAT           CCGCG-CGGT GAT ACCGGCGCGG           TTTTTTTGTCTCTGT 100 54
        yihI  223527 ..  223564 + -16.5  -3.66784   CCGGCGGTACTGCAT   TAAAACCGGCGTAACAG GCGA CTGTTATGCCGGTTTTC    TTATATTCAGCCTAC 100 62
JC861_RS00985  224048 ..  224058 +  -3.2  -2.98719   CTATGTCACCGGCAC                 CGGA TTG TCTG                 TCTGTGGTGTGATCA  44 41
        hemN  225549 ..  225578 + -14.4  -3.02293   TGATTTAATCTGCTT       CCGGGGTTGATG CGGTGT CATCAATCCCGG        CTTCTTTCAGTTTCC 100 33
        typA  232035 ..  232062 +   -17  -5.03994   GTTTTGATTCATGCC        ACTCAGGGCGCC TCCG GGCGCCCTGAGC         TTTTTCTGTCTGCCG 100 53
        yihX  232838 ..  232852 +  -2.8  -4.29369   TTTTCCGCAGAAGTG               ACTGAA TAA TTCAGA               TTTGATTATTTTTTA  59 17
         dtd  233301 ..  233312 +  -2.2  -2.78596   ATGGTCCGGTCACTT                TCTG GCTG CAGG                 TATGATACAACAGTC  41 9
        fabY  234482 ..  234499 + -12.7   -4.2074   ACCGATAAAGAAAAA             CAGCGCC TTAC GGCGCTG              TTTCTGTATTAGCAG 100 222
        gltS  239294 ..  239311 +  -9.1  -5.32944   CGCTTAAGCAGGCAA             GCCACCT TCCG GGGTGGC              TTTTTTCGTTATACG 100 48
JC861_RS01075  247585 ..  247599 +  -2.1  -4.14392   ATTATGAGCCGTTTC              CG-CTG CTTC CAGGCG               TTTTACCCGTTCCGC  56 79
        glyQ NONE
        glyS  252109 ..  252133 + -15.1  -5.14563   AGTGATGTTACAGAA          TAGAGCCCGGT CTG ACCGGGCTTTA          TTTTTTACTGACCAG 100 54
JC861_RS01105  253586 ..  253604 + -10.3  -5.46698   CCATATTAAGAAAAA             CCCTGCT TTTAC AGCAGGG             TTTTTTGCTTTTCAG 100 38
JC861_RS01110  255270 ..  255292 +  -4.8   -3.6187   AGGGCGGGGTCTCGG           TCAGCGTCAG TTA CTGACGATAA           TTGCTTTCGTTACGT  57 9
JC861_RS01115  257360 ..  257391 + -13.6  -2.87211   GAAATCAGTGTTACC      GGTCTGCCGCCTCC TCCG GGGGGCGGCAACCC       TGTATCGAACCGCAT  93 49
        dppB NONE
        dppC NONE
        dppD  260931 ..  260951 +  -3.8  -3.09492   TTATCCGCATATGTT            CTCCGGCG GTCAG CGCCAGCG            TATTGCGATTGCCCG  48 491
JC861_RS01140  262326 ..  262336 +  -8.2  -2.77118   AATCAAAGGGACGTC                 CCGG AAG CCGG                 TCAGTTTTGCCTGTG  64 76
JC861_RS01145  264151 ..  264169 + -11.8  -5.65177   AATATGAAATAAAGA             GGGTATCT GTA AGATACCC             TTTTTTTATGACTAT 100 52
JC861_RS01165  267170 ..  267182 +  -6.2  -5.45802   GCAACCGAAATTTAA                CCGG GCCTG CCGG                TTTTTATTTTCAAAA  91 26
JC861_RS01175  268643 ..  268668 +  -8.2  -3.70043   CCGGAATAATTCGTT         TCCGCTGCGG GCATGA CAGCAGCGGG          TGTTTATGTATTGAC  73 32
        gorA  270082 ..  270108 + -13.1  -6.25242   ATTTAATAAATGAAA         CCGGCTGTATG CATGT CATATAGCCGG         TTTTTTTTTACTTAT 100 49
JC861_RS01185  270969 ..  270998 +  -5.1  -4.59511   CGTAAATAGTAGCTG       TCGCTGTC-TTCTT CTG AAGAGTGACAGCCA       TTTTTCAGCAGTATT  75 265
JC861_RS01235 NONE
JC861_RS01240 NONE
        dsbA  282570 ..  282591 + -14.5  -5.21709   CTGTATCTCCCGGAA           GCAATGGCG GTAA CGCCATTGC            TTTTTTACTATCCAC 100 50
        polA  285735 ..  285774 + -12.2  -3.51976   CGTTGGCCGCACTCA  GAAATCCGGGTCACATAC TGGT GTATGCTCCCCGGATTTC   TTCCTTTGCCGCCTT  91 70
        ppiA  289637 ..  289653 +  -5.1  -2.93382   TGTCAAACTCCCTGA              TAGTCTG AAT CAGACGA              TATCTGCCTCTGCGA  52 94
JC861_RS01280  290808 ..  290824 +  -6.5  -4.87133   AAAGCTGATAAAACA              CACGTTC GCG GAACGGG              TTTTCTTTGCCAACT  80 422
JC861_RS01290  292115 ..  292132 + -12.7  -4.30576   TTAAGAAAAGAAAAA             CAGGCGC AATT GCGCCTG              TTTTGGTGATAAAGG 100 50
JC861_RS01300  293536 ..  293558 +   -15  -5.66684   ATTTTTGAACATAAA           CCGGGTAATA CAT TATTACCCGG           TTTTTTTATCGCTTG 100 61
JC861_RS01320 NONE
JC861_RS01325 NONE
JC861_RS01330  297163 ..  297181 + -14.6  -4.99035   AATAATCATGAAAAA             CAGACCGC ATT GCGGTCTG             TTTTTGTATCACTCC 100 55
JC861_RS01345  300731 ..  300759 +  -3.7  -3.72576   GCGGGTTCCTGAAGA        TCACCTCGTCCGC AAA GTGGACGTCGTCA        TTTCATCAAGGAACC  53 54
        kefG NONE
        kefB NONE
JC861_RS01395  313506 ..  313518 +  -2.7  -3.56862   ATAACAGGCAACGGT                TTTTC ACA GAGAA                TTTGGGGGAATTTGT  48 37
        slyD  314267 ..  314314 + -20.3  -4.09519   AACCCGCGTCTGAAC CGGACA-AAAAAAAGCGCATTC CTGAC GGATGCGCTTTTTTTATGTCCG TTGTTTATCAGTAGT 100 42
        fkpA  315571 ..  315590 + -10.7  -5.27335   CGGAAACTGACAAAA            CCCGCAC TTTTCT GTGCGGG             TTTTTGTTTCCGCGG 100 54
JC861_RS01415  316647 ..  316667 + -10.4  -3.90922   CCTGCCTACGGCACA            CAGCGTGC CGGCA GCGCGCTG            TTGTTTGCCCGGCAT  89 91
        tusC  317340 ..  317355 +  -5.4   -4.3586   GAAACTGGCGGCATT              TGACGC CGTG GTGTCA               TTTTGATCTACATAC  68 4
        tusB  317723 ..  317734 +  -3.6  -4.78848   TCAGCAATAAAATTT                CGCG TCCT CGTG                 TTTTGTCTTTGACAG  70 77
        rpsL NONE
        rpsG  318730 ..  318759 +  -3.5  -2.75498   TAACAAGGCGTTCGC       ACACTACCGTTGG TAAT CAAACCGTAGTGA        ATTGTGTATAGGGTA  45 10
        fusA  320953 ..  320967 +  -6.4  -3.72642   CGTAATGCAAAATAA               TCGGTA ATT TACCGG               TTTAACTCGTTAATT  63 26
         tuf  322239 ..  322256 + -11.3  -4.93318   TAATAATCCTAAAAA             GGGCATC AAAT GATGCCC              TTTTTCTGCGTTGTC 100 50
        secE NONE
        nusG  323443 ..  323481 + -11.2  -4.59853   TCTTTTCCGGACTTG   CAAAGGGCGGGAAATT TATCTAC AATTTCGCGCCTTTTG   TTTTTCAGGGGTTCG 100 46
        rplK NONE
        rplA  324729 ..  324766 + -10.8  -3.97911   ATAATAAGCACTTTA   CATTGGG-GTCAGGTTT CTGTA GAATCTGACGCCCAATG   TTTGCTGTATTTGAT  90 50
        rplJ  325580 ..  325590 +    -4  -2.91264   TCTGAATTTTAGGAA                 CATA TCG TATG                 TCTATCACTAAAGAA  47 84
        rplL  325990 ..  326015 + -15.5  -4.63527   CTGAAAATGGCTGAT         GGCTGGTGACT TATT GGTCACCAGCC          TTTTTGCGCTAATGC 100 62
        rpoB  330365 ..  330377 +  -4.8  -3.53012   GGTACACGGGCAGCA                CCAG TAAAT CTGG                TTTAAGGGACAGACA  55 61
        rpoC  334693 ..  334713 + -15.5  -5.26316   GTAACTGACTGAACA            GCCCTCCTT TTT AAGGAGGGC            TTTTTTGTGCAGTAC 100 54
JC861_RS01495  336086 ..  336113 + -17.2  -5.41143   TTATATAACAACTCA        CGGCCTGATAAT CACG ATTATCAGGCCG         TTTTTTTACGGAATA 100 49
JC861_RS01505 NONE
JC861_RS01510  339751 ..  339768 + -12.7  -4.68994   TAGACTAAAAAACAA             GGCCGGT CTTC ACCGGCC              TTTTTACATCATCGT 100 33
JC861_RS01545  347316 ..  347351 + -13.3   -3.5511   GCTGCCTGACCGGGA    TGATACCCGCTGACG TATCTT CGGCTGCGGGTATCA     TATTTATCAGTGACG 100 32
        nudC NONE
        hemE NONE
         nfi NONE
JC861_RS01595 NONE
        hupA  356670 ..  356684 +  -7.8  -4.71426   AACAGATTGATAGAG               GGGGAT TTC GTCCCC               TTTTGTTGATCAGAC  86 53
JC861_RS01605  357326 ..  357358 +  -7.7  -3.65603   TTCTGTAAATGGGAA      CCTACGGAAGATTCA CTG TAAATCTCCCGCAGG      TTATTAACGCTGTTT  70 5
JC861_RS01620 NONE
JC861_RS01625  362570 ..  362581 +  -2.2   -3.6682   ACTGATACTGCGTTG                CG-GC TCC GCTCG                TTTACGTCAGTAAAC  49 47
JC861_RS01630  362768 ..  362805 +  -9.3  -3.56837   CTGATATCTGAACAA   TAATTCAGAGTTTACCG GAAA CGGTATGCTGTGAATTA    TTATGCTCTTTAACA  76 45
JC861_RS01635  365976 ..  365986 +  -6.8  -4.27316   GGCTTAACCTGACAA                 CACC GAA GGTG                 TTTTGAGTTGAGAGA  74 30
         rrf  366245 ..  366255 +  -2.4  -2.80398   CAGTCACACAGAGAT                 ACGC GGA GCGG                 TAGTTCAGTTGGTTA  41 72
JC861_RS01645  366337 ..  366358 + -14.5  -5.51612   GCCAACAAACATTAA           CCCCGATAG GAAA CTATCGGGG            TTTTGTTTTTTGTAT 100 37
        metA  367460 ..  367490 +  -9.7  -2.82834   CATGATGTCTTTATG      CT-GCGGCACCGGC AACA GCCTGTGCTGCCAG       TGTGGTAATACGATC  72 83
        metH  374354 ..  374367 +  -2.3  -4.11751   TCTTGTTTTCGTCCG               GGAGA ACTT TCACC                TTTTGACAGGTTAGT  55 429
JC861_RS01670  375626 ..  375650 + -17.2  -5.93809   TTCGTGTAATTTGAT          CGCCTGACGC TGACC GCGTCAGGCG          TTTTTTTTATCCGCA 100 423
         pgi  379010 ..  379034 + -12.8  -4.85782   CGTTTTATAAACAAA          GCCGCCCTGC ATTGC GCAGTGCGGC          TTTATTTTTAGCAAA 100 63
        ubiC NONE
        ubiA  380857 ..  380867 +  -5.4  -2.84125   CATTCTGTACTGTGA                 GACT TGC AGTC                 ATTTCACTGTGTACA  50 353
JC861_RS01695 NONE
JC861_RS01700  383211 ..  383232 + -13.1   -5.9873   ACCGGCAATAAAAAA           GGAGATTGG CTGC CCAATCTCC            TTTTTTTTGTACTCA 100 140
JC861_RS01710  386287 ..  386299 +  -3.3  -3.59979   CGTAACACGTATTTT                CCTCA TGT TGTGG                TTTCCAATCCCGGAA  51 67
        lexA  387018 ..  387046 +    -6  -5.61881   GTATCCGCTTAAAAA       CCACAGTATGCCG GAGA CGGTC-ACTGTGG        TTTTTGTTTTTCAGC  95 66
JC861_RS01725  388235 ..  388260 + -14.7  -2.66787   TAAACCAGACCGGCA         TGCAGCGCCAC ATCA GCGGCGCTGCA          TCATGTCAGTGTTCA 100 38
JC861_RS01740  390842 ..  390870 + -17.6  -5.46698   TCAGTCCCCGGACAA        TACTCCCCGGAA CAGTC TTCCGGGGAGTA        TTTTTTCGTTTTACC 100 43
        dusA  394861 ..  394889 + -18.9   -4.3208   AATCAGTGATAAAAA        TGCCCGCCGTTTC TCA GAACCGGCGGGCA        TTTTACATTCTGCGG 100 43
        dnaB NONE
         alr  398696 ..  398740 +  -2.3  -3.66288   CGAATAAAATGTGAC GCGATATGTTCTGATAGTGA GAAAAA TAACAATCAGGA-GTATCGC TTGTGTTCGAACATG  49 34
JC861_RS01775  400348 ..  400369 + -14.5  -4.11216   AACGGATAAAAAAAA           TACCGCAGC GGGC GCTGCGGTA            TTTTCAGAATCAGAA 100 434
JC861_RS01790  404042 ..  404075 + -18.5  -2.97925   ATATCTGTTATTTCA     TATAAAAAATCCCGC GTTG GCGGGATTTTTTATA      TCTGTGATCTGAAAT 100 46
        ilvB NONE
        ilvN  408824 ..  408841 + -12.7  -5.24531   AGTAGTGTGATAAAA             CCGGGCT GATA AGCCCGG              TTTTTTGTCCGGGCT 100 36
JC861_RS01820  410323 ..  410350 +  -2.6  -5.41746   TGCTGATCAGTAACC        TGGTGCACTGAC GGCG GTCAGCGCAGGA         TTTTTTTAGCGCATT  80 15
JC861_RS01830  412853 ..  412881 + -16.8  -5.74122   TGAGAAGATAAAATA        GCAGTGGCGGAT AACGC ATCCGCCGCTGC        TTTTTTTGTATGATA 100 137
JC861_RS01835 NONE
JC861_RS01840  415899 ..  415914 +  -4.6  -3.62572   GGGCCAGCGGATGAT              CCGGTG CCAC CACCAG               TTTCACCTCATAATC  57 359
        metE  418834 ..  418853 + -13.6  -4.31766   ATAAAGAAGAAAAAA            GCCGGTCA GTGA TGACCGGC             TTTGTGTTATGTGCT 100 56
         udp  421835 ..  421863 + -17.5  -6.17184   GGTTTCATGAATCAG        CCGTATCACCGGA TTT TCCGGTGGTGCGG        TTTTTTTTTAATCAT 100 49
JC861_RS01870  422807 ..  422819 +  -3.3  -4.56153   CGTGAACATGAGTTC                TGGGC ATT GCCGA                TTGTTTTTGTGCTGG  63 106
        rmuC NONE
        ubiE NONE
JC861_RS01890 NONE
        ubiB  427974 ..  427985 +  -4.4  -3.28866   GTTAAGACAAGGTTT                CAAC CTAT GTTG                 TGTATTTCCGTATAC  51 48
        tatA  428319 ..  428334 +    -4   -4.2717   AAGAGCAGGTATAAC              CCG-TGT TTG ACATCGG              TTTTGGTGAACTGAT  63 27
        tatB NONE
        tatC  429653 ..  429670 +  -7.7  -5.63517   CGCGTCAGATAAAAA             CCGCCTGT AAT AC-GGCGG             TTTTTTGTTTCCGGG 100 49
        pepE  431145 ..  431164 +  -5.7  -4.15565   TTGTAACAGTGGACG            GGATTCC TATAAT GGAGTCC             TTTTCACCTGCTGAC  68 50
        ubiD NONE
         fre  433454 ..  433496 + -10.7  -4.08948   GTATCAGAGACGTAT CAGCGACGTATTGTGCT GTGTGGTGA AGCAGAAAACGTCGCTG TTGTTTATCAGATTA  93 103
        pepQ NONE
JC861_RS01950 NONE
        trkH  440568 ..  440583 +  -5.4  -2.71483   TGCTGGTATTACTGA              CGCC-GA CTT TCTGGCG              TGATTAACGGAGTGT  49 3
        hemG  441149 ..  441161 +  -4.8  -3.40403   GACGGGCTTTTTGCC                CGGT AAATC ACCG                TTGTGGTGAAAAAAG  53 48
JC861_RS01965  443153 ..  443169 +  -2.1  -2.92157   AAAATGAGCAGAGAG              CGTCTGC GAA GCTGACA              TATGTCCCCTTCGTC  42 86
JC861_RS01970  443285 ..  443315 +  -7.1   -2.7362   GTCATCTGCAAATAA      TGATTAAGCTGATT CAAG AGTCAGCTTAA-CA       ATTATGCTCTTTAAC  59 63
JC861_RS01975  446480 ..  446490 +  -6.8  -4.27316   GGCTTAACCTGACAA                 CACC GAA GGTG                 TTTTGAGTTGAGAGA  74 30
         rrf  446712 ..  446744 + -15.7  -2.71712   CCAGGTTATTATTAA      GTGAAGAAGCCACCC ATT GGGTGGCTTTTTTGC      GTTTGGGCGAAAAGA 100 35
JC861_RS01995  451876 ..  451903 + -15.7  -4.56314   TGCTGATAAAACAAA        CAGCCATACCG TGTCAC CGGTATGGCTG         TTTTCATTGTATTAA 100 47
JC861_RS02005 NONE
JC861_RS02010 NONE
JC861_RS02015 NONE
        phoA  457319 ..  457341 +   -17  -5.94214   TTTCAGCAGTGGCTG           CCGCCGGTAC TCT GTGCCGGCGG           TTTTTTTATTATCTT 100 137
JC861_RS02025  459531 ..  459563 +  -8.6  -5.28315   GACACATTAATTATA      GGTGTATGATTTTA AGGTA TATAATCATGCACC      TTTTTTGCATTTTAT 100 302
JC861_RS02035  460242 ..  460280 +  -3.9  -3.53712   TTAGCGGTTTTATCC   GCGCCGTCAATAATTTT TTATC AAAATTGGTGACTTCGC   TTAATTATTAGGCAT  51 345
JC861_RS02055 NONE
        rimI  462300 ..  462312 +  -4.1  -2.91264   TAATTTTCTGCATGC                TACCG TGG TGGTA                TATATCCATCACAGG  47 101
        fliB  463571 ..  463581 +  -2.4  -4.66264   CCTGCTTGATAACTG                 AGCC CGG GGCA                 TTTTTCAGGCTTTTG  63 25
        prfC  465458 ..  465473 + -11.8  -5.75342   TGTCAGCAATCTCAG              CGCGCC TCCG GGCGCG               TTTTTTTTACACCGG 100 197
JC861_RS02075 NONE
JC861_RS02080  467063 ..  467075 +  -3.5  -3.22298   AACCGGCGGACTGAA                TAAAT GCA ATTTA                TTGATACTCACTGCC  48 27
JC861_RS02085  467993 ..  468009 +  -5.8  -4.56597   TAAATATCCGTCAAT              TCCCGG CTTCT CTGGGA              TTTTTCAGAGAAAAA  73 158
JC861_RS02090  469496 ..  469524 + -21.9  -4.35742   TGTAACTGCTCCTCC        CGCACAGGTGAAC CCG GTTCACCTGTGCG        TTTTACTGATTCGGT 100 36
        deoC  470719 ..  470740 + -13.7  -5.26875   TATTAATCACGTTTA           CCGGGCTGC TTTT GCAGTCCGG            TTTTTTGATTAACCC 100 35
        deoA  472186 ..  472198 +  -4.1   -3.2121   TGACACAGGAGAGAA                GTATG AAA CGTAC                ATTTATTATGGTGCT  49 86
        deoB  473427 ..  473447 + -12.6   -3.8698   TGTGTTTCTTTTTTC            GGGCAGAC AGTCA GTCTGCCC            TTTCCCTTTGGATTG 100 41
        deoD  474222 ..  474250 +   -11  -6.01369   CAGTCATTATAAAAA        CCGTTGCCGG TATTATTCT CCGGCAGCGG        TTTTTTTATTATTTA 100 48
JC861_RS02140  485102 ..  485116 +  -4.3  -3.62539   GCCACAATAAAAGTA               CCATT ATGAA AATGG               TTAATTTAATTAATG  54 247
JC861_RS02145 NONE
JC861_RS02150 NONE
JC861_RS02155 NONE
JC861_RS02160  489752 ..  489762 +  -5.4  -2.88252   TTTATTATTTATTTA                 CTGA AAA TCAG                 TATGGTGATTGATTT  50 72
JC861_RS02165 NONE
JC861_RS02170 NONE
JC861_RS02175 NONE
        ureE NONE
JC861_RS02185  494119 ..  494132 +  -2.3   -3.9122   GCCTGTTTATGAACT               GACAG GTGG CTGAC                TTATTTCCGGGAGTA  53 24
        ureG NONE
JC861_RS02195  495783 ..  495813 + -12.8   -4.1347   CCGGTAGTTACTCAG       GGGACTGATTAT TATCAGC ATAATCAGTCCC       TTTGTCTGGTTCACC 100 58
         yut NONE
JC861_RS02205 NONE
JC861_RS02210 NONE
        crcB  499535 ..  499564 +  -5.9  -3.68416   TTGCAGCACCGGTAA       TTTGCTGAATACTA AAA TAGTAT-CTGCAAA       TTCTGCTTGTTTTAA  61 26
        serB NONE
        radA NONE
        nadR  504456 ..  504482 + -13.7  -4.34267   CCATCCAACCAAAAA         TGCCGCGCGGT TCCTC ACCACGCGGCA         TTTTCCGTTATATGA 100 326
        sltY  508718 ..  508749 + -15.8  -3.87967   GATAGTCCCTTTCCG      GCCCGGTTCAGCAG AAGA CAGCTGCACCGGGC       TTGTGTTATTCTGGT 100 39
        trpR  509240 ..  509256 +  -2.9  -3.77806   TGTTCCGCAGAGAGC              GTGCTGT AAC GCAGCAG              TGTTTTGATCTCCGG  53 145
JC861_RS02265  510715 ..  510738 +   -16  -3.65046   GTGCCGGAAAGGTCA          CCGGGCCGGT TATC ACCGGTCCGG           TTATTCAGATCAGGA 100 43
        gpmB  512161 ..  512174 +  -8.1  -4.30719   GGGTGAACAAGACAC               CACCG GCGG CGGTG                TTTGTTCTGCGGGAG  79 67
JC861_RS20595  512971 ..  512984 +  -3.8  -2.91735   ACATCAGGCAGAGTT               TCGC ATTAAA GCGA                TGTGTCGCGTGTTGA  46 60
JC861_RS20600 NONE
JC861_RS20605  514060 ..  514078 +    -3   -4.6759   CACCATTCGTCAAGA             CGGCGGTA CAG TGCCGGTG             TTTTATTAAACTGTT  65 288
        creA  515098 ..  515126 + -14.5  -2.89154   AGCAGGATCAAAAAA        TCCCCGGTGACGC TGA GCGGCACCGGGAA        TATCGTATGATGTTA 100 47
        thrL  516601 ..  516624 + -13.9  -6.09133   GAAATCACGAAAAAA          GCCCGCACA ATTGAC TGTGCGGGC           TTTTTTTTTGGACTA 100 50
        thrA NONE
        thrB NONE
        thrC  521640 ..  521665 +  -7.7  -3.79747   ATCACTTTATACTTG         CC-GTTTTTCTC ATC GAGGAAAACCGG         TTTGATAATCACTGC  69 305
         tal  523537 ..  523554 + -12.7  -5.63517   CAGTCAGATTCAGGA             GGCAGCC GGGA GGCTGCC              TTTTTTGTTTCCGGC 100 52
         mog  524194 ..  524208 +   -10  -4.11394   AAACAGCAATAAAGC               CGCAGT AAC ACTGCG               TTTTCAGCATAAAAT  88 18
JC861_RS02340  525648 ..  525677 + -15.1  -4.77986   TTTATGCTGTTTTAA       TGCCGTGCTGATA TGAC TGTCAGCGCGGCA        TTTTTCAGTGTTTCA 100 52
        dnaK  527904 ..  527937 + -16.7  -3.09273   TAATCACTGAAAACC     GGCACGGGCGTTGAG GAAA CTCTGCGCCCGTGTC      TGTGTGTTAAGGGAC 100 72
        dnaJ  529133 ..  529157 + -20.1  -5.43487   TAAATTATATCAAAA          CCGGCCGGAAA ATT TTTCCGGCCGG          TTTTTTGTGTGCTTT 100 53
JC861_RS02355  530042 ..  530057 +  -7.5  -3.25823   GATTTGCAGGATGCC              GCCGG TCAGTC CCGGC               TTGCTGTAACGCAGA  61 246
        nhaA  532109 ..  532149 +  -8.5  -2.76261   ACAGTCCGGCAGTAA CCTGTT--ATTCACCGGCC TTCCC GGCCGGTGAATACAACAGA ATTTCCGAGTTAAAC  64 26
        nhaR  533144 ..  533173 + -16.7  -2.87931   GGCAGAAAAAGGATA       TAAAAAAACCGGC GTGA GCCGGTTTTTTTA        TGTCTGCACAATCAG 100 41
        ribF NONE
        ileS NONE
        lspA  538122 ..  538141 + -12.2  -5.39721   GACTGATGACCCGAA            TATCCGCC GCCA GGCGGATA             TTTTTTATCTGATAC 100 35
        fkpB  538688 ..  538702 +  -3.5  -3.55444   TTTTTGTTTTACTGC               CCGTC CGGGC GATGG               TTTGGAGGCTGAACG  51 109
        ispH  539677 ..  539694 +  -9.9   -6.0427   GTCTGATACAGAAAA             GCAGAAC AGAG GTTCTGC              TTTTTTTTGTCTGCT 100 35
        dapB  540825 ..  540835 +  -3.2  -5.48825   CTCATCCCTTTTTCC                 GGTT GTG AGCC                 TTTTTTTCAGTAATC  91 190
        carA NONE
        carB  545501 ..  545514 +  -8.1  -5.90231   AATTAATATAAAAAA               TCCGC TGCG GCGGA                TTTTTTTATCTTTAT 100 48
JC861_RS02425  547204 ..  547230 +  -8.8  -3.62096   GTCGGATAAATAAAA         GCCATCAGTATG ATT TATACTGATGAC         TTTCAGGTAATAAAA  75 310
        exbB NONE
        exbD  551839 ..  551857 + -13.2  -5.45652   GCCTGAAATAAAAAA             GCCGTTCA TCA TGAACGGC             TTTTTTGTTGCCACT 100 55
JC861_RS02465 NONE
        glnE  557776 ..  557786 +  -8.2  -4.08571   ACGCGGATTTTCTGT                 CCGG TGG CCGG                 TTTGTGATATTATCA  79 55
        hldE  559278 ..  559304 + -19.6  -3.54029   AACAGACTGATTATT         CAGGAGATACGC ATT GCGTATCTCCTG         TTGTCATTACTCGCC 100 39
        ribB  560725 ..  560746 + -11.6  -5.08178   CTGAAATCCTGAGAA           TGCCGCTG CTGACA CAGCGGCA            TTTTTGTATCTGTGT 100 71
        ygiD  561668 ..  561694 + -16.7  -5.27335   TTTCGCTATAAAAAA         TCCCCGCGATA CCGGA TATCGCGGGGA         TTTTTGTTTCAGCCG 100 49
        nudF NONE
        cpdA  567004 ..  567022 +  -3.1  -3.21099   CAGATGAGTTCAGTC            CCGATCTG GGTT CGGA-CGG             TTACTGATGGCGACG  46 0
        yqiA  567628 ..  567642 +    -5  -3.30771   AATCGTATTTAAATT               TATCAG GGA CTGGTA               TTATCGCCAGTATCA  53 43
        parE  570067 ..  570086 +  -8.6  -2.64803   AGTGAACTGGGACAC            GGCACCGCA GAC TG-GGTGCC            TAACTTTGACGGTAC  63 494
JC861_RS02535  572825 ..  572852 + -11.5  -2.70979   TCATCCGCTATATCA        TACGCTTAACA CTCCGT TGTTAAGCGTA         TGCCTTTCATTAAAG  80 122
        ftsP  574390 ..  574433 +   -15  -4.57569   CAGTATTAAATGACG ATAAATAAAAAAGGCTGAAT ATTT ATTCAGCCTTTTTTATTTGG TTTTTCAGCGGCTCA 100 32
        folA  576531 ..  576549 + -14.6  -5.62045   TATTAATACAAAAAA             GCAGAGCC ACC GGCTCTGC             TTTTTTCTTGTCTGT 100 74
        djlA  584778 ..  584790 +  -3.4  -4.78753   GACCGGAAACAGCCT                TACC CGCGT GGTA                TTTTCTTCATATTCC  71 466
        rppH NONE
        ptsP  597297 ..  597312 +  -4.6  -3.13343   GCTTAACCGCACATC              CCGCGT AATA AGGCGG               TTCCGTCCTTACAGT  51 35
         lgt  598326 ..  598345 +  -8.6  -5.36441   GTGAGTAACAAAAAA            CTGCATCG TAAC TGATGCAG             TTTTTTGTATCCGGA 100 59
JC861_RS02645 NONE
JC861_RS20610 NONE
JC861_RS20615 NONE
JC861_RS02655  605896 ..  605908 +  -2.6    -3.794   TAAAGGCATTCTGAG                TCGG CTTAC CCGG                TTTAATAAATTCCGG  51 369
JC861_RS02670 NONE
JC861_RS02675 NONE
JC861_RS02680 NONE
JC861_RS02685 NONE
        recC NONE
        ptrA NONE
        recB NONE
        recD  622189 ..  622211 +  -2.7  -4.13561   TCAGGATTTTGGAGC          GCCGCTGGTA GTTA TA-CAGCGCC           TGTTTTTTGACCGGC  58 67
        amiC  625104 ..  625115 +    -3  -5.41787   CTGAAATAATCGTAT                TTCA GGGA TGAA                 TTTTTGTGTTTTTTC  82 113
        mltA  626841 ..  626876 + -12.8  -4.09519   GTAGTCTTTTATTCC    TG-GGGTGTATACTTTG CGA CGAAGTATGCACCCGCA    TTATTTCTCCGTCAT 100 37
        tcdA  627987 ..  628005 +  -2.4   -3.0579   CGTTGCTGCTGAGTG            CGCCGTC CAGCCA GACG-CG             GTTTTCACAGCCTTT  42 273
JC861_RS02755 NONE
JC861_RS02760 NONE
        rlmM  632396 ..  632419 +  -8.2  -5.68039   TAAATATCGTTAAAA          TCCCGGCGGAT CAG ATT-GCCGGGA          TTTTTTTATCACTTT 100 58
         syd  637147 ..  637168 + -15.9  -4.72272   TTATTTTATTAGAAA           CGAGGGGGA TTTT TCCCCCTCG            TTTTTAATCCCCCCG 100 268
JC861_RS02795  637634 ..  637646 +  -3.3  -2.70932   CACTGGACGGGCTTT                TCGCG TGA CACGA                TCATTGCAGGACACG  42 18
        truC NONE
JC861_RS02805  638917 ..  638943 +  -5.8  -2.99704   ATGACGGAAAATAAC        GCCGCAGCAGC CTGACA GCA-CTGCGGC         ATTGTTTCATCCGGC  54 40
JC861_RS02835 NONE
        rpsB  645775 ..  645807 +  -8.6  -2.88999   AGGTATTGCTGCAAA     TG-GT-TAGGGAGCCG TCA TGGCTCCCTATACGCA     TCTGATATATGAACA  64 74
         tsf  646730 ..  646753 + -14.6  -4.71223   ATAATCATTGCATAT          CAGAGCCGCC GGAA GGCGGTTCTG           TTTTATCTGTTGTAC 100 37
        pyrH  647567 ..  647586 +  -4.8  -2.75521   GATTTCGCGTGACTA            AACGCCGG GACA CCGGCGGA             ATTTGACGGTATCAT  49 25
         frr  648306 ..  648339 + -14.9  -3.21276   CTATGAGATTGCTGA     CAAAGCAGGATAAAAC GTG GTTTT-TCCTGCTTTG     TGTTATCAGCCGAAA 100 89
        ispC  649891 ..  649910 +  -9.3  -5.03994   GACAAACAGAGACAA            CACCGTG AACCTG CACGGTG             TTTTTGTGTCTGACG 100 160
        uppS NONE
        cdsA NONE
        rseP NONE
        bamA NONE
JC861_RS02885  655998 ..  656008 +  -3.2  -3.14404   TATCACTGCTGATGT                 TCTG AAA CAGG                 TTAAATAATTAATGT  46 7
        lpxD  657070 ..  657108 + -13.3  -3.72027   ATTTTGCGGTATTTT  TGCGGCCTGCTA-ACCGCG TGA CG-GGTATAGCAGGCCGTG  TTATTAATAAGACAT 100 47
        fabZ NONE
        lpxA NONE
        lpxB NONE
        rnhB NONE
        dnaE NONE
        accA NONE
        tilS  666337 ..  666347 +    -4  -3.52787   ATCGCTCCGGGAAGA                 CTAT ATC ATAG                 TTATCATATTGGCTA  52 344
        nlpE  667220 ..  667239 + -12.2   -5.0916   GGCAGAAATAAAAAA            GGCTGAAC AAAT GTTCAGCC             TTTTTGTATTCACCG 100 55
        gmhB  674050 ..  674060 +  -2.6  -2.95204   AGAAATAAGCAGCAG                 TAAA CAG TTTA                 ATTCTTTGAGCATCA  43 372
JC861_RS02975  675687 ..  675703 +  -2.1  -2.92157   AAAATGAGCAGAGAG              CGTCTGC GAA GCTGACA              TATGTCCCCTTCGTC  42 86
JC861_RS02980  675819 ..  675849 +  -7.1   -2.7362   GTCATCTGCAAATAA      TGATTAAGCTGATT CAAG AGTCAGCTTAA-CA       ATTATGCTCTTTAAC  59 63
JC861_RS02985  679019 ..  679029 +  -6.8  -4.27316   GGCTTAACCTGACAA                 CACC GAA GGTG                 TTTTGAGTTGAGAGA  74 30
         rrf  679251 ..  679283 + -15.7  -2.71712   CCAGGTTATTATTAA      GTGAAGAAGCCACCC ATT GGGTGGCTTTTTTGC      GTTTGGGCGAAAAGA 100 35
JC861_RS02995 NONE
JC861_RS03000 NONE
JC861_RS03005  681943 ..  681963 +  -9.7  -4.60258   CAGGATATAAAAAAA            CCGGGTG TTTTATT CACCCGG            TTTATTGTTTGCTGA 100 44
        queE  684452 ..  684465 +  -2.3  -3.92522   AGGAATGAATGTCCG               TGCAG ACGC CCGCA                TTTATGGCCTTCCGG  54 300
JC861_RS03025 NONE
        ftsB NONE
        ispD NONE
        ispF NONE
        truD  689264 ..  689285 +    -8  -5.70829   TGATTAAAACAAAAA           GGGCGGAA TAATAT TTCTGCCC            TTTTTTTGTCCTGTT 100 50
        surE NONE
JC861_RS03060  691325 ..  691347 + -13.4  -2.74012   AATAATACAATCCTG           CCATGCGGTC TGC GGCCGCGTGG           TGAATTTCTGATTGT  93 92
        nlpD  692521 ..  692541 + -14.1  -2.59748   ACCGCAGCGATAAAC            GGCAGAACA GCT TGTTCTGCC            TGAATTATCGGGGTA  95 28
        rpoS  693607 ..  693638 +   -16  -4.39426   ATAAAAATTATTCAT      GCAAAAGGGGGGAA TTTA TTCCCCCCTTTTTC       TTTTATCCGGCTGTC 100 72
JC861_RS03085  698396 ..  698407 +  -5.8  -4.81734   CAGCTTCTTTATTTC                CGGA GAAT TCCG                 TTTTTAATGATATTT  78 7
JC861_RS03090 NONE
JC861_RS03095  700908 ..  700918 +  -5.4  -3.85509   CCGGATGTACAAAGA                 GCTT GGA AAGC                 TTTCCGTTCTCTTCC  61 226
JC861_RS03125  706793 ..  706816 +  -2.4  -3.82824   ATAGCCGGAACCAGC          TCCGGGTGC AGCGGTA GCG-CCGGA          TTATTGTAACTGCTG  51 139
JC861_RS03140  709674 ..  709694 + -16.9  -5.59655   ACCATGGTCCTCTGA            GGGCGGCAT TTG ATGCCGCCC            TTTTTTATTAATTTA 100 53
JC861_RS03145  711485 ..  711508 +  -6.8  -5.80817   CAGGTATGAAAAAAA          CACAGGTA CGGATTTT TACCTGTG           TTTTTTTATATTCGC 100 52
JC861_RS03150  713571 ..  713582 +  -2.2  -3.64703   GCCTGATCCAACACT                TTCC CTGA GGAG                 TTTGCATGAGCGACG  49 35
        cobO  714226 ..  714247 + -12.3  -6.07627   CACTGTTATAAATAA           TCGCTCCGT TTAT ACGGGGCGA            TTTTTTTTTGCCGGT 100 73
        cobA  734991 ..  735022 +  -5.8  -3.27525   AAAATAATAAGCATC      CGGCTGTATGCAGG TGAT TCTGTGTGCAGCCC       TTACATTTGGAGGAA  57 51
        cobD NONE
JC861_RS03285  737023 ..  737052 +  -6.3  -4.62772   GCTGCACTCAATAAA       CCGGGTCACATAC TGGT GTATGCTCCCCGG        TTTCTTTCGTTTGCC  77 84
JC861_RS03290  738418 ..  738445 +  -9.8  -2.89298   GCTGAAAAAATAAAA        CTCCGGAGTCGT AATA GCGGCTTCGGGG         TAATTATGTGAGCTG  72 36
        glmS NONE
        glmL NONE
JC861_RS03305 NONE
JC861_RS03310 NONE
JC861_RS03315 NONE
JC861_RS03320  745340 ..  745378 + -16.8  -3.53012   CATTAGTACGACAAC   TCGATGTGGCGTACGGGG CTT TCCTGTACTCCGCATCGA   TTTCAGAAACAGAAA 100 63
JC861_RS03325  746925 ..  746952 + -12.8  -5.93809   TGTAATATGTATTAA        GCGCAAAATGCC CTCA GTCATTTTGCGC         TTTTTTTTGTACGGG 100 123
        eutS NONE
        eutP NONE
        eutQ NONE
        eutT NONE
         pta NONE
        eutM  757319 ..  757347 + -10.3  -4.34402   TCGATTAATCGTTGT        TAGCGTGGCGT GCTTCTG ACGCCACGCGA        TTTTAATCTCCCCGG 100 33
        eutN NONE
JC861_RS03390  759224 ..  759251 + -13.4  -4.62872   CATCGTGTAAGCCGC        TGCGGTGGAGCC TGCG GGCTTCACCGCC         TTTTTCCCGGTTAGT 100 31
        eutJ NONE
JC861_RS03400 NONE
        eutH NONE
        eutA  764080 ..  764095 +  -3.2  -2.64794   AAATCACTCGCATTT              CCTTCC TGAG GGAACG               TAATATGAAATTAAA  42 17
JC861_RS03415 NONE
        eutC NONE
        eutL NONE
JC861_RS03430 NONE
JC861_RS03435 NONE
JC861_RS03440 NONE
        eutR  770895 ..  770935 +  -3.6  -2.86271   TCCATAAGAAGAATT  TAAATATCCAATTAGT TCTATATTT ATTAATTGGCTATTTA  TAATTCTACTGAGCA  45 176
        ansB  772027 ..  772054 +  -3.9   -5.7946   ACGCGTTTTTTCAGA        CCGCAGCCCCC GTGTAG GGGGGGGGGGG         TTTTTTTATTACCGG  91 43
JC861_RS03455 NONE
JC861_RS03460 NONE
JC861_RS03465  776454 ..  776468 +    -7  -5.00884   ACTGCTCAATGTACG               GCGGCG TTA CGCCGG               TTTTTTCCCGCAGCT  86 523
JC861_RS03475 NONE
JC861_RS03480  778968 ..  778980 +  -3.3  -5.39721   TTTCTCACCACGACC                TGCGC TCT GCTCA                TTTTTTCTGTAGTAA  85 191
        yqeB  793944 ..  793967 + -16.8  -2.90496   GCTGATAACGGACTT          TCCGGGTACG GCAG CGTACCCGGA           TGATTTCAGGCGCGG 100 36
JC861_RS03540 NONE
JC861_RS03545  796734 ..  796768 +  -4.4  -4.72497   CCCGGAAGCTGACAG    CGCGGAATTATCCGTG CTGTT CACGGA-AAT-CCGGG    TTTTATTGGTAAATG  72 365
JC861_RS03555 NONE
JC861_RS03560  799642 ..  799672 +  -9.6  -3.45023   CGGCAGAGTGTCATC       CGCTGCTGCGGG ACGATCA CCCGAAGCCGCG       TTGTGCTCCTGCTGC  71 291
      tet(D)  801408 ..  801429 +  -5.1  -3.35438   CGGCAACCTGCTGAC           CGGCGCT ATACAGGC AGCGCTG            TTGTGCGGTATGGTG  55 27
JC861_RS03575 NONE
        fghA  803464 ..  803477 +  -9.5  -5.24129   GTCTCAACGCATAAA               CCCGG TCAG CCGGG                TTTTTTCTGCGACAG 100 27
JC861_RS03595  807306 ..  807324 + -17.4  -4.56597   AGGTAACAAAGCAAA             CGGCCGGG GTT CCCGGCCG             TTTTTCACAGAAAAA 100 48
JC861_RS03625  815898 ..  815921 + -15.3  -5.37043   AGAATGTGTGCCAAA          GCCGCACGG AAGTTA CCGTGCGGC           TTTTTTGTATCAGAT 100 55
JC861_RS03635  817036 ..  817071 +  -8.2  -4.44974   GTGCTTTTGCAGCAG    CAGACACCGCAACCCTG ACG CCGGGC-GCGGTATCTG    TTTTCTGCGGTTTAC  87 8
JC861_RS03655 NONE
JC861_RS20625 NONE
JC861_RS03660  825438 ..  825455 +    -7  -5.60993   ATGTAAATACTGAAA             GCATCC TGCAAC GGATGC              TTTTTTTATAGAGAA 100 51
JC861_RS03670  828012 ..  828025 +  -6.7  -2.65206   GCAGAGATTCTCTCT               GACAC TCCG GTGTC                TCCGTTATCCTTTCT  56 24
        rarD  829681 ..  829702 +  -3.6  -3.08358   TGGGGATACGATCCC           GCCGATCA CTGTGA TGGCCGGC            TATCTGCTTATTTCG  48 12
        purT  830955 ..  830970 +    -6  -2.65264   GGCGTCAGTGGTCGT              CACCGG CTGA CCGGGG               TAATATCGGTGATGG  52 16
JC861_RS03685  832040 ..  832055 +  -4.6  -3.71045   TAAGCACGGAGATTG              CCGGAA GGTG TGCCGG               ATTTTTTAGTCATAT  55 507
JC861_RS03695  834591 ..  834629 + -11.1  -5.56673   GTAACGCTGAAATCT   CATCCCCCGTATGATGT CAGTC ACATTGTGCGGGGGATA   TTTTTTATTATCCGT 100 53
        yjiA  835740 ..  835762 +  -7.8  -3.95036   TAAAAAGCCAAACCC           GGAAAAATCA GGC TGATTTTGCC           TTGTTTGCCATGATT  74 103
JC861_RS03715  839951 ..  839964 +  -6.7  -5.62045   ACAGCGTTGAAAAAA               GTGGT GAAA ACCAC                TTTTTTATTATCTGT 100 59
        tnaA  841940 ..  841966 + -15.2  -3.56092   TAACCCTGTCGTCTT         ACAGGAGGATGC ACT GCATCCTCCTGA         TTTCAAACATAATGA 100 38
         mtr  843560 ..  843573 +  -8.1  -2.92668   TCGTGAATATAGCTG               GCCTG TGCA CAGGC                TATCATTAACTCCTC  58 332
JC861_RS03745  848039 ..  848052 +  -8.1  -3.86524   CTCAGCACAATCATC               CAGCG TAGT CGCTG                TTTCTGCCCCGATAT  72 420
JC861_RS03760  850752 ..  850785 + -14.9  -3.23393   TGTTGAGATTGCTGA     CAAAGCAGGATAAAAC GTG GTTTT-TCCTGCTTTG     TGTTATCAGCTGAAA 100 48
JC861_RS03770  852267 ..  852288 +  -7.3  -5.03314   GGAGTAAATAATTAA           GCGTAGTAA GTCA TTACTCCGC            TTTTTTCACGGTCAG  89 30
JC861_RS03780  854603 ..  854632 + -13.7  -3.01791   AAAGCAGTGAGATAA       AAAAACCGCTTCC GTAA GGAAGCGGTTTTG        TATTCAGGGAAAAAT 100 44
        cueO  864874 ..  864895 + -12.3  -2.93566   ATTACCCGGTGACAA           TCCGCGTCA GTCA TGGCGCGGA            TACTGTTTATCTGTC  93 48
         hpt  865567 ..  865584 + -12.7  -4.20806   TTGTGAATATAAAAA             CGGCACC TGCG GGTGCCG              TTTGCTTTTACAGTG 100 50
JC861_RS03835  867363 ..  867377 +  -4.2  -2.80816   CATGATTTGGAGGCT               GCGAAA TGA TGTCGC               TGTACTGGGTGGCGC  46 17
JC861_RS03840  868158 ..  868179 +   -13  -5.07275   GCATTCTGATAATCA           GCCCGGCA CATTGT TGCCGGGC            TTTTTGTATCTGTCC 100 45
JC861_RS03845 NONE
JC861_RS03850 NONE
JC861_RS03855 NONE
JC861_RS03860 NONE
JC861_RS03865  874939 ..  874975 +    -3  -5.38549   GGATCATATCTGCCA   GAGTCTGCATCA--CCTG ATA CAGGCGTGGTGCTGCCTC   TTTTTCTTCTTTGCC  85 274
        hrpB  882597 ..  882611 +  -4.3  -3.61889   AAGTTTATGTAAATG               CAAAG ATAGC CTTTG               TTTAACGGATTTTTA  54 29
        mrcB  885256 ..  885281 + -11.9  -4.16943   CCGTAAGAAGCACTG         AAAAACCCGCC GCAA GGCGGGTTTTG          TTTTAGGGTATACGC 100 49
JC861_RS03910  886046 ..  886061 +  -4.6  -3.70773   AGTTGTCGCACGCCA              TCACCG CTAG CGGGGA               TTCTTGACTGTACGC  57 340
JC861_RS03915  887292 ..  887320 +    -9  -2.83748   TCAGCTAATCTTGCA        TGCTGCTCTA TCCTAGATT TAGAGCAGCA        TCGTTAACTTTCTGT  67 67
JC861_RS03930  889934 ..  889962 +    -9  -2.83748   TCAGCTAATCTTGCA        TGCTGCTCTA TCCTAGATT TAGAGCAGCA        TCGTTAACTTTCTGT  67 366
JC861_RS03960 NONE
        dmsB NONE
JC861_RS03970 NONE
        dmsD  901892 ..  901915 +  -8.9  -5.80364   TTGCTCGTAATCTTG          TACGCCTCT TTCTCC GGAGGCGTA           TTTTTTTGTTGCAGT 100 68
JC861_RS03980 NONE
JC861_RS03985  902668 ..  902685 + -14.1  -4.27584   AGCCCACTGAAGTAA             CGCCGGG GTAA CCCGGCG              TTTTGCATTGCGGCT 100 229
        erpA  905078 ..  905095 + -14.1  -4.44797   AGATAACAAATAAAA             CGGGCGC TTTT GCGCCCG              TTTTGATATTGCTGA 100 50
JC861_RS04010  907521 ..  907538 +  -3.3  -3.73224   CCGCAGCGGTTGGTA             CGCCTGGC GTC GCC-GTCG             TTTACTGACGAATAC  51 473
JC861_RS04020 NONE
JC861_RS04025 NONE
JC861_RS04030  911815 ..  911828 +  -4.5  -3.32844   AACTGACGATGCGCG               TCTGC CGCA GCGGA                TTATCGGATAAGGGG  53 1
        dmsB NONE
JC861_RS04040  913280 ..  913301 + -11.6  -5.24129   GGTATGAAACAAAGA           TCCGGACG CTTTTA CGTCCGGA            TTTTTTATCAGCGGG 100 46
JC861_RS04050 NONE
JC861_RS04055  916613 ..  916636 +  -3.9  -3.87815   CGGGTTTTGGCCGAA          CTGGAGAAA GATCCG TTTTTCCGG           TTTATCACCGTAGCG  58 422
         dgt  919470 ..  919497 +   -10  -3.19157   TCACAAATGACCTGA        CAATTCCGGT TCAATATT ACCGGAATTG         TTGCTACGATTAATC  74 66
JC861_RS04075  920894 ..  920914 +  -8.4  -5.78622   ACCGGCAATAATAAA            CCGTTATT TTTTT AATAACGG            TTTTTTTTGCGGTAA 100 69
        rlmD NONE
        relA  924852 ..  924866 +   -10  -5.64274   CGGTTACACTGAAAA               GCAGAC TCT GTCTGC               TTTTTTTATCACTCG 100 54
        mazG NONE
        pyrG  927571 ..  927595 +  -9.3  -3.51161   TAAGATGTGAGGTGA          GTGACCGGC CGTAAGT GCCGGTTAC          TTATCTGAAAATTTA  76 38
         eno  928954 ..  928974 + -15.5  -5.64274   GTGAATGTTAAAAAA            GGTGTGTCC GGC GGACACACC            TTTTTTTATGACTCC 100 49
JC861_RS04105  930696 ..  930715 + -13.6  -5.60993   GTACAACGCAAGAAA            CCCGCTGA TTTA TCAGCGGG             TTTTTTTATACCGGC 100 72
JC861_RS04120  934091 ..  934103 +  -3.3  -4.17516   GCCACAAATCGACAT                TCACC ACC GGGGA                TTTATCTGCTTTGCG  60 202
        dnaQ  935190 ..  935201 +  -3.6  -4.03234   CGGAGCTGACAGTAT                GCTG TGCG CGGC                 TTTCTGTACAAAACC  58 32
JC861_RS04135  935410 ..  935434 + -17.3  -5.56263   TCCGCCACATTATAA          CGCCATGCTAT TCA ATAGCATGGCG          TTTTTGTTTTGTGGT 100 34
        lysS  937985 ..  938024 +  -8.7  -2.64091   AGTAGAATAAAATGA  GAAAGGGGGGAGGTTAAT GAATA ATTAACCTCCCC-CTGAC  TCATATGAAGTGCTT  66 31
JC861_RS04150  939185 ..  939208 +  -9.4  -3.02096   ACACCTGCATCCGTA          CACCCGGCCG GCTC CGGCCGGGGA           TCTCTGGTTACTCCC  71 266
        cadB NONE
JC861_RS04160  943225 ..  943252 + -16.4  -3.08863   TGATATAAGCCTCTC        TATGGCCGCCTC ATTT GAGGTGGCCATA         TACTTCTTTAATTTA 100 45
         tkt  946154 ..  946183 +  -9.4  -5.88197   ATACAGATTCTGAAA       GCGCATTCCGGTT TTTTT GACCG-AATGCGC       TTTTTTTATCTTTGC 100 48
         epd NONE
         pgk NONE
        fbaA  949830 ..  949852 + -19.2  -5.72616   GCGTGAATAACAAAA           CCGCCCGGTA TTT TACCGGGCGG           TTTTTTTGTATGAAT 100 47
JC861_RS04215 NONE
JC861_RS04220 NONE
JC861_RS04225 NONE
JC861_RS04230 NONE
JC861_RS04235  959730 ..  959746 + -12.3  -3.58864   ATAATTTCTTTCAGC              GGGCTGA GAA TCAGCCC              TCTTTATAATAATCC 100 40
JC861_RS04240  960382 ..  960412 +   -14  -2.64803   GCTGGCTGCCGTAAA       AAATGCCCTGTCCG TTA CGGACAGGGCATAC       TGCGTTTACAGATCC  95 53
        hpaR  967141 ..  967164 + -19.6  -4.18197   AAAAGAATAAAAAAA          CGCGCCGCTC AGAT GAGCGGCGCG           TTTTCAGTGACAGAT 100 31
JC861_RS04280  971176 ..  971188 +  -6.3  -4.42386   GCTTTCTGCCATTTA                TCATC ACA GATGA                TTTTGTCGATAACGG  72 92
JC861_RS04335 NONE
JC861_RS04340  984944 ..  984957 +  -6.7  -3.31415   GTTCCCTGGTATAAA               CGCTT GCTA AAGCG                TTGAGTTTAATAGTA  61 8
JC861_RS04345  985770 ..  985785 + -10.4  -4.58308   CCGGAAAGCAAAAAA              CCAGCC CGAA GGCTGG               TTTCTTTAATTAGTG 100 416
        trmB NONE
JC861_RS04380  989832 ..  989857 + -13.4   -2.9914   CACGCTAATTATTAA         TAAGGGCACC CGTTCA GGTGCCCTTA          TCTCTCTCCGGCATC 100 55
        glsB  990889 ..  990903 +  -3.6  -2.55551   TGAGAATCAGGAGTG               TTTATG TTA CGTAAA               TGGATTGCCGTTCTG  44 67
JC861_RS04390  991625 ..  991655 +    -9  -5.41143   CCCTTAAGTAATATA       AGGTTACCGGTGCA TTA TGTGCCGGTAACTG       TTTTTTTAGCCGATC 100 30
JC861_RS04395  992765 ..  992786 +  -9.3  -5.86976   TCTGAATAATAAAAA           CCCGGGCGT GAAA GCGGCCGGG            TTTTTTGTTTTATAA 100 53
JC861_RS04420  996979 ..  996989 +  -2.4  -4.32857   ATAATCACGGCAGAG                 GCGG AGT CCAC                 TTTATCTTTGCCGAG  60 105
JC861_RS04445 1001061 .. 1001081 +  -9.7   -4.0371   CATCCCGCCGCCGTG            CAGGGCG ATGGTTA CGCCCTG            TTTATGTACGGCCTG  83 509
JC861_RS04460 1003360 .. 1003370 +  -4.6  -4.20084   CCATAATCATCCGCC                 GCGG AAT TCGC                 TTTTCACTGAATAAT  64 278
        lysA 1005413 .. 1005446 +   -14  -3.75024   TTTCTGACTGATATT     GAAAATCCCCGGGA ATAACA TCCCGGGGATTTTA      TTATTAATACTCCCG 100 58
JC861_RS04475 NONE
JC861_RS20630 NONE
JC861_RS20635 1007803 .. 1007832 + -17.9  -4.30995   GTAAGACAGAGCAGT       CATGGCGGAGCAG GGAA CGGCTCCGCCATG        TTATTTTATACGCCG 100 37
        lpcA 1011283 .. 1011306 +  -6.6  -5.74122   CAGGCATCTGAAAAA          GCACTCCGCT ATCC GGCCGGGTGC           TTTTTTTATGTCGTG 100 47
JC861_RS04495 1012471 .. 1012484 +  -5.9  -2.74144   TCAGATCTGTCTGTC               CGCTC AGCA GGGCG                CTTTCCACATAGCGG  51 252
JC861_RS04505 NONE
JC861_RS04510 NONE
JC861_RS04515 1016804 .. 1016818 +  -7.8  -3.07344   AACAACCCGATTGCC               CTCCAG GTT CTGGGG               TGTGTTCGGCGCTGG  63 84
        nqrE NONE
        nqrF 1019231 .. 1019256 + -14.7  -2.63596   CCCTGTCATAACGAA         ACTGCGCCCAC TCCT GTGGGCGCAGA          TGATCTGAAATCAGA 100 48
JC861_RS04535 NONE
        nqrM 1020604 .. 1020628 + -15.8  -4.58786   CTTTGTCAGCAATCT          CAAAGGCGCC GGTCA GGCGCCTTTG          TTTATTGTTGTTCAT 100 63
        dinB 1024075 .. 1024096 +  -2.2  -5.08824   TCGGCCCGATGGAAA           CCATGTCC ATGTCC GGATACGG            TTTTTTGAATAAACC  74 202
         gpt NONE
        frsA 1027444 .. 1027462 +  -7.4  -3.21416   GTTTGCTACAACTAA             GCCTCC ACTGAAA GGAGGC             TTGATGATGGCGCTG  62 72
         crl 1027859 .. 1027874 +  -6.8  -4.32482   CCCCCCGGAAAGCAG              CCGGAT TAAT GTCCGG               TTTTGCGTTGTGCCT  74 17
        proB NONE
        proA 1030381 .. 1030393 +  -3.3  -4.84033   CAGATGACAACCGTT                CTGCG GAT CGCAC                TTTTGCTTTTTATCT  68 76
        aroL 1031002 .. 1031027 +  -3.9  -4.77165   ATCTGTACCCGCCTT         CACGCCGCTGTA TAA TTCTGCGGC-TG         TTTTATTGTGAACAG  70 11
         aas NONE
        lplT NONE
        pncC 1035043 .. 1035058 +  -6.2  -2.82933   AAAAATCACTTGATA              CTGTAT GACT ATACAG               TATAATCACTTCAAC  55 18
        recA 1036266 .. 1036296 +   -17  -4.99638   TCATTGAGTTATTTC       GAAAGCTGTATCCG TGA CGGGTACGGCTTTC       TTTTTGTCTGCGTAT 100 82
        alaS 1039225 .. 1039250 + -14.7  -2.50016   CGGAGTATATCTGAA         CAGGGGCGCGC TCCG GCGTGCTCCTG          ATATTGGTGATAACG 100 42
        csrA 1039635 .. 1039666 +  -7.3  -4.10437   TAACTATTAAGTTGT      GAGGCGCGCTCGTT ACCGC GACGGGCGC-CTTC      TTCTTTCCTTCCTGC  73 31
JC861_RS04625 1040049 .. 1040061 +  -3.3  -2.87463   CAAAAGCTGCATCGA                GGGTT CGA ATCCC                TCTCTCACCGCCATT  43 0
JC861_RS04630 1040166 .. 1040186 +  -7.5  -5.45802   GGTGCACCATTTAAA            CCCCACGAT ACT GTCATGGGG            TTTTTATTTTGGCAA  95 32
JC861_RS04635 1040321 .. 1040331 +  -3.2  -3.53841   GTTCGAATCCTCTCG                 GGTG CAC CATC                 TTATCACTTTATTTC  49 17
JC861_RS04640 1040450 .. 1040460 +  -3.2  -3.40191   GTTCGAATCCTCTCG                 GGTG CAC CATC                 TTCCTCTCTTATCCC  47 17
JC861_RS04645 1040568 .. 1040586 +   -16  -5.63236   TGCACCATATAAAAA             CCCCGCTC TTT GAGCGGGG             TTTTTCTTTTTCCGT 100 34
        gshA 1042376 .. 1042393 +  -5.5  -3.01125   TTTGATGAGTATCTG             GCG-CTGC ATG GCGGTCGC             TGATTTCTGACAGAT  52 5
        luxS 1043100 .. 1043122 +  -9.9  -5.67063   CCGGATACAAAAAAA          CCTGCG-GCA GCAA TGCACGCAGG           TTTTTTTATGGTGAC 100 50
         ffh 1046909 .. 1046942 + -12.5  -3.98083   GGGCTTTTTCTATGA     CAACCGGACGCCATT CCTC GATGGGGTCTGGTTG      TTTGTCAATTCAATG 100 107
        rpsP NONE
        rimM NONE
        trmD 1048578 .. 1048595 +  -6.3   -4.1721   CAACAAGTTAATCCA             GGTATCC TGCG GGATATC              TTTTGAAATATCAGT  69 30
        rplS 1049016 .. 1049034 + -11.7  -5.46657   GATATGATAATAAAA             GGCCAGC CTCGT GCTGGCC             TTTTTTATTGCGCTA 100 54
JC861_RS04695 NONE
        tyrA 1051674 .. 1051691 + -11.3  -5.38321   ATAAAAATAAAAAAA             GCGGATG ATAT CATCCGC              TTTTTTGTCATGTTT 100 43
        rluD NONE
        pgeF NONE
        clpB 1060245 .. 1060262 + -14.1  -5.03715   AGAAAACAAAACTGA             GGGGCGC GAAA GCGCCCC              TTTTTTGCGCATCAT 100 48
JC861_RS04740 NONE
JC861_RS04745 1062395 .. 1062406 +  -2.2   -3.6682   ACTGATACTGCGTTG                CG-GC TCC GCTCG                TTTACGTCAGTAAAC  49 47
JC861_RS04750 1062593 .. 1062630 +  -9.3  -3.56837   CTGATATCTGAACAA   TAATTCAGAGTTTACCG GAAA CGGTATGCTGTGAATTA    TTATGCTCTTTAACA  76 45
JC861_RS04755 1065798 .. 1065808 +  -6.8  -4.27316   GGCTTAACCTGACAA                 CACC GAA GGTG                 TTTTGAGTTGAGAGA  74 30
         rrf 1066029 .. 1066061 + -15.7  -2.71924   CCAGGTTATTATTAA      GTGAAGAAGCCACCC ATT GGGTGGCTTTTTTGC      GTTTGGGCGAAAGTA 100 35
        treR 1067228 .. 1067241 +  -6.7  -3.16608   ACGTTCGTCCCGTAA               TGGGA TCGT TCCCA                TTGAGTCATTTCCAT  59 70
        treB NONE
JC861_RS04775 NONE
        pgmB NONE
JC861_RS04790 1073591 .. 1073609 + -13.2  -5.61596   ATCACAGTAAAAAAA             TACCGGGA AAA TCCCGGTA             TTTTTTTGTCCGGAT 100 50
JC861_RS04880 1096021 .. 1096036 + -10.4  -5.48303   AACCAGATGAAAAAA              GCTGCC ATAA GGCAGC               TTTTTTTCAGGTTCT 100 138
JC861_RS04910 1106764 .. 1106779 + -11.8   -5.1675   AGTGATTGATTCAAA              CCCGGC ATTT GCCGGG               TTTTTTAATCGATCA 100 53
        mnmH 1122259 .. 1122295 +  -6.5  -3.10677   CATCATTCGTCATAA    ATCAGTCCGCCGGGATA TCA TTTTCCGGTGAACTGAC    TTGCATGAATTCATT  57 51
JC861_RS04980 NONE
        cspE 1123340 .. 1123363 +  -7.5  -6.02914   TTACCGTGACGAAAA          CCTGTTACT CACCAT AGTAACGGG           TTTTTTTTATATCAG 100 82
JC861_RS05040 1134094 .. 1134109 +  -3.2  -3.93236   TTTTATCGTCCATTA              GTTACC TTCA GGTTAC               TTTGTGAAATTAATC  56 357
JC861_RS05050 1135058 .. 1135086 + -13.9  -2.82834   GCCAGGAAAATATAG        CCGGACGGCCT TTTGTGC AGGCTGTCCGG        TGTGGTGATCAGATG  85 169
JC861_RS05095 1143992 .. 1144015 +  -3.1  -5.32565   CATGAGGGATTAGCA          ACCGGCAAT CTTTAT ATTGTCGGG           TTTTTTGCTTAATTC  79 28
JC861_RS05100 NONE
JC861_RS05105 NONE
JC861_RS05110 1147324 .. 1147349 + -13.3  -6.02914   GTCTGAAATGAAAAA         TCCCGCGGTGA GCAA TCACGGCGGGA          TTTTTTTTATCTGCG 100 44
        ubiF 1154410 .. 1154437 +  -9.8  -4.76478   CACGTCCGTGTGCGC        TCAGGCGCGTCA TCCC TGACGCGCATGC         TTTTCGTTTATTTTG 100 123
        nagE 1161140 .. 1161159 + -11.4  -5.82281   CAGTTATGATAATAA            CGGGAGGC ATCT GCTTCCCG             TTTTTTTATCTGTTT 100 48
        glnS 1162991 .. 1163008 + -11.3  -5.76237   ACTGATATAAAAAAA             GCCGTTC ATGC GAACGGC              TTTTTTGTTTGTGTC 100 57
JC861_RS05215 1165624 .. 1165643 +  -7.8  -3.05844   CGTCTGTCCGGGTGC            TGACACCG GCAG CGGTGACA             TCTTCCAGTGCCGCG  59 406
        seqA 1166857 .. 1166872 +  -5.4  -4.04206   CGAGAAAGTCTGCAA              TACCCT GTAA GGGGTA               TTTATCTGCCGGTGA  63 16
         pgm 1168575 .. 1168599 + -15.7  -5.75342   TCCCGGAAAAAGCGA          CGCGGAGCGGA TTT TCCCCTCCGCG          TTTTTTTTACCGCGG 100 46
JC861_RS05235 1169113 .. 1169155 + -18.6  -2.96152   ACCGGCATCCGGCAG CAAAAGAGGCGCCCGGCGAT ATT ATCGCGGGGCGTTTTTTTTG TCTGTAAATTGCTAT 100 42
JC861_RS05240 1169984 .. 1170001 + -12.7   -4.4084   CGTAACAAGAAGAAA             GCCGGTC ATCT GACCGGC              TTTTACTATATGGTT 100 43
JC861_RS05250 1172073 .. 1172086 +  -8.1  -4.36914   GAATGCATAATAAAA               CCCTC CGGA GAGGG                TTTTATAAGGACGGA  79 56
        sdhC NONE
        sdhD NONE
        sdhA NONE
JC861_RS05275 1177294 .. 1177314 + -15.5   -4.2558   GATTGATAATAATAA            GATGCCTGC AAG GCAGGCATC            TTTTACTAACCCGTA 100 62
        sucA NONE
        odhB NONE
        sucC NONE
        sucD 1183970 .. 1184002 +  -9.2  -5.21709   CCGGGTATTTTTATA     CAGCCGG-GGCAG GCCTGATA CTGCTTCCGGCTG      TTTTTTGATCTGAAC 100 43
        cydA NONE
        cydB NONE
        cydX NONE
        ybgE 1187921 .. 1187938 + -11.3   -5.8901   CGTTTATGACAACAA             GCCGTTC ATCT GAACGGC              TTTTTTCTTTTCTGT 100 62
JC861_RS05325 NONE
JC861_RS05330 1190887 .. 1190902 +    -9  -4.75308   TCGGTAGCACAAAAA              TCCGGA TAAT TCCGGA               TTTTTGCATATTCAT 100 188
        ybgC NONE
        tolQ NONE
        tolR NONE
        tolA 1193856 .. 1193867 +    -3   -3.3422   GTCAGTAACCTGTTA                TATC CTGT GATA                 GTTTTTAACAGGGTA  47 54
        tolB NONE
         pal NONE
        cpoB 1196556 .. 1196571 +  -3.2  -2.80715   GCTGAGAAAAAACTG              GCTGGT TTAT AACAGC               GGTTTATTTTTTTGC  43 14
JC861_RS05370 NONE
JC861_RS05375 1196921 .. 1196933 +  -3.3  -3.06492   CATTTCAGACCACCT                CCGCA GTA TGCAG                TATTACGATGGGTCG  44 39
JC861_RS05380 1197055 .. 1197083 +  -2.6   -4.7261   TTATTCTCCCCGGCC       TCAT-ACCGG-AGA TCA TCTGTCGGTTATGA       TTTATTTTCCTGCGT  64 62
        pnuC 1198921 .. 1198948 + -12.2  -3.14132   ATCCGGTGATTATAA        TGAGAGTCTGAT AACA ATCAGATTCTCA         TTAATCAGCAACAAA  86 60
JC861_RS05395 1199921 .. 1199941 + -12.6  -4.26019   CACCCCTCTCACAGG            CAGCGGCT GATGA AGCCGCTG            TTTTCCATCTGATTC 100 42
        aroG 1201190 .. 1201206 + -12.3  -5.75342   GACAGAAAATAAAAA              CCCTGAC GAT GTCAGGG              TTTTTTTTCACCGGA 100 60
JC861_RS05420 NONE
JC861_RS05425 1208808 .. 1208834 +  -9.4   -3.7511   AGTTACTGACGAAAA         GCCGCCGC CAGTTCAGTCC GCGGCGGC         TTGTATTATCAACAC  81 43
JC861_RS05435 NONE
JC861_RS05440 1210674 .. 1210701 + -14.2  -3.76546   GATTATCCTGTATTC        AGGATCACCTGC CTGT GCAGGTGATCCG         TCTTTGCTTTTGTTT 100 39
        modA NONE
        modB NONE
        modC 1213479 .. 1213501 + -13.5  -3.18264   TGCCCTGCCGCTGAA           CCGGCGATA TATAT TATCGCCGG           TTCATCACTGACCCC 100 97
JC861_RS05460 1213998 .. 1214015 +  -8.5  -5.38249   GAAATAATAAAAAAA             TGCCTTT ATTA AAAGGCA              TTTTTTATAGTTCAT 100 65
         pgl 1216452 .. 1216493 +  -2.7  -4.36778   TGCCGAGCACCCGGG CATCCCGGACGCCGCTG CGGGATTT CAGCGGCAGCAGGGCGG  TTTTCAGTTGTGTTT  62 400
        bioB NONE
        bioF NONE
        bioC NONE
        bioD 1221354 .. 1221372 +  -3.1   -4.8277   GGCCGGGTGTTTTTT             ATCAGGA AAAAA TCCTGAA             TTATTTTTTCTCTTT  68 85
        uvrB 1223892 .. 1223929 + -14.1  -2.88544   TCAGCAGCAGATTGC   GGTCATGGCGGTACGGG ACAT CCTGTGCCTCCAGGACC    TCTCTGACAATCAGG  86 81
JC861_RS05510 1225599 .. 1225632 + -16.8  -4.21772   TGGTAAATAATTTTC     CCGGCAAACCGCCG TATTTC CGGCGGTTTGTTGG      TTGTTATTTGTTCGG 100 75
        moaA 1226945 .. 1226963 +  -9.5  -2.63112   CGAATTTATCTGTTA             TCGGCGG CTGAT CCGCCGG             TCATATCAGGAGTTT  68 15
        moaC NONE
        moaD NONE
        moaE 1228312 .. 1228333 +  -4.5  -3.73775   ATCTATAGGCCTTGG           TCGTTTATC ATCC GATAAACAA            TTTGATACAGATGAA  57 176
JC861_RS05535 1229133 .. 1229166 + -14.9  -3.21276   GCCTGAGATTGCTGA     CAAAGCAGGATAAAAC GTG GTTTT-TCCTGCTTTG     TGTTATCAGCCGAAA 100 86
        rhlE NONE
        dusC 1239554 .. 1239565 +  -4.4  -2.94032   AAAATTTGCTTTTTT                TGTC ATAT GACA                 CTTTAATTGACAGGT  47 39
JC861_RS05585 1239897 .. 1239923 + -13.1  -5.71983   TAACAGATAAAAAAA        TGCCGGAGTCAC TGAT GTG-CTCCGGCA         TTTTTTTATGGTTCG 100 49
        dinG 1243367 .. 1243391 +  -6.5  -5.13354   GAACGGCTTTTCGGT          TGCAGCATAAA GGA TTTATGCAGTA          TTTGTTTTTTATCCG  86 148
JC861_RS05625 NONE
JC861_RS05630 1247157 .. 1247173 + -10.9  -4.55887   ACTGAGATAAAAAAA              CCTCATC ATG GATGAGG              TTTCTGTTTTTCAGA 100 36
        codB NONE
JC861_RS05650 1253929 .. 1253957 + -14.6  -3.74872   AGCACCACTTTTCCG        CTGCTCACCTGC CCGTA GCCGGTGAGCAG        TTTGATGCACTCCAT 100 79
JC861_RS05665 1257238 .. 1257271 +  -8.3  -4.93547   AATAATTAACTCAGG     GATAACAGGCTTATT ATTT ATTAATCCTGTTATC      TTTTTAATTAATTAA 100 39
JC861_RS05670 NONE
JC861_RS05675 1257829 .. 1257840 +  -3.6  -3.92746   AGGTTATATAACACA                TCGG TTAT CCGG                 TATTTTTCCGGTAAA  58 30
        folE 1258689 .. 1258699 +  -2.4  -2.84504   CGCCAGGAATTCCTG                 CGCG CAG CCCG                 TCATATTTAACCGAT  41 5
JC861_RS05685 1259883 .. 1259906 + -11.6  -4.67168   GATGCTACGGTGCAG          CCGGTGCCGG TTGC CCGGTTCCGG           TTTTTGCCGGTTTTT 100 44
JC861_RS05715 NONE
JC861_RS05720 NONE
JC861_RS05725 1266810 .. 1266827 +  -6.9  -5.59564   TTTTAAAATAAAAAA             CCTGCAC CAAA GCGCAGG              TTTTTTTCAGTTTAT 100 49
        apbC 1270303 .. 1270326 +  -8.8  -5.60993   CCGGAAAGTAAAAAA          GGCCCGCACA GTAA TGTGCCGGTC           TTTTTTTATGGCAGC 100 68
         udk 1271199 .. 1271223 +  -8.7  -2.64155   ACAACGAATTAACCC          GCGTTTATC CGCCGGT GATAAACGC          TGAGTTTAAGAAGGA  66 48
         dcd NONE
        asmA 1273775 .. 1273803 + -12.6  -5.14563   ATTTATACAAACAGA        GCAGTGACGATA ATTTA TATTGTCACTGC        TTTTTTAATGCAGAA 100 52
        dcuC 1275345 .. 1275368 + -13.8  -5.38047   TGTAAAACGCGATAA          GCCGCACCGG TTAT CCGCTGCGGC           TTTTTTGTATCAATA 100 36
JC861_RS05760 1275697 .. 1275713 +  -9.4  -3.89215   AAAGCAATAAAAAAA              CCCCGT ATCTG ACGGGG              TTTCGCTTTATAAAG  81 40
JC861_RS05780 1280258 .. 1280289 + -17.4  -2.66435   CGATTAACTGTTAAA      TAATAACGCCGCCG GAAA CGGCGGCGTTATCA       TCATATCGTGCGGGT 100 34
JC861_RS05810 1288421 .. 1288451 + -11.1  -3.09327   TGCCGGAGAGAAAAT       CGCTGAAGACCCG GGTTA CGGGCCTTCAGCC       TGTTGACTAACATAA  79 50
         hcp 1289077 .. 1289101 +   -13  -3.60805   CAACGATAAGCTAAA          GGATATGTGC TATTT GCACATATCC          TTTGAAATAACGTAT 100 45
JC861_RS05885 1300615 .. 1300636 +  -8.7  -4.68103   CAGAGAATAAACTCA           CCGTCCTGA TACG TCGGGATGG            TTTTATTCGGGTTCA  88 474
JC861_RS05895 1302217 .. 1302240 + -14.6  -4.59081   GGTTAAACACAATAG          CCTGCCGGTT AACT GACCGGCAGG           TTTTCTCTCCGTTTA 100 35
JC861_RS05900 1302922 .. 1302946 +    -8  -5.60993   GAAATCCGTATAAGA          TCCGATATTA CATCC TGATATCGGA          TTTTTTTATAAAAAA 100 99
JC861_RS05905 1303535 .. 1303558 + -16.8  -4.63527   TCCTGATATGAAAAA          CCCCCGCAAT CTGC ATTGCGGGGG           TTTTTGCAGTCATCA 100 35
JC861_RS05935 1311369 .. 1311389 +  -4.7   -3.2568   ATCCGTTATTGGTCT           GCGGGTGA CATTTT TC-CCCGC            TGTACTTTTGTTTTT  53 73
JC861_RS05940 1311902 .. 1311914 +  -5.5  -2.61383   ATTCCGTTCCTTCTC                CGGTG ATC CACTG                ATTATCCGTACCACT  49 12
        rlmC 1313095 .. 1313121 + -14.5  -4.96848   GCCGGAATAAAAAAA        CGGGGCTG-CGT ACAG ACGTCAGCCCCG         TTTTTGTATGAGCGG 100 44
JC861_RS05980 NONE
        macA NONE
        macB 1323523 .. 1323570 +  -7.1  -3.18044   CACACCGGCTGAAAA TACGAATACGTCGCGG-AATGAC GATT GACATTACCGCGACG-ATCCGCA TAATTTTGTAAAATA  62 44
        clpS 1324462 .. 1324473 +    -3  -2.59135   TGTACACTCGAGAAG                GTAT AAGA ATAC                 ACTTTATTTCTCAGA  42 20
        clpA 1326828 .. 1326870 + -13.5  -4.83615   TACAGACATAAAAAC GATCACCACAGGACGCGCAC TTCG GTGCGTTGCCTGTGGTG-TC TTTTTATGAGGCGTG 100 67
         lrp 1333682 .. 1333706 + -14.4  -3.39521   TTATGCATACAGTTT          CAACGCTGAG CTACC CTCAGCGTTG          TTCCGTTTTACTGAC 100 91
JC861_RS06040 1337354 .. 1337373 + -11.4  -3.05997   AACTTTTAATGACAC            CGCTGCCT GAAA AGGCGGCG             TCTGATTTATCCGAA  83 32
        lolA 1338014 .. 1338033 +    -5  -2.82775   CGCTGGACGATCAGC            GTCAATGA GGCG TCAGTGAC             TAACTTTTCTCTCGA  49 18
JC861_RS06050 1339441 .. 1339457 +  -6.5  -3.86822   ACTCAGAATGTTCAT              CCTGCAT ACA GTGCGGG              TTTCTGGGCGGATTA  65 94
        serS 1340915 .. 1340938 + -12.4  -6.06529   TGATCTGATAAAAAA          TCCCGCCGGT GTAA ACCAGCGGGA           TTTTTTTTATCTGTA 100 59
JC861_RS06095 1349801 .. 1349811 +  -5.4  -4.00407   TTATGACCATAGCTT                 TCCA GGA TGGA                 TTTCACTTTTTCCAT  65 124
        serC 1357362 .. 1357387 + -14.7   -5.2197   TTGCAGACATTTTTC         CGGGACCGGAT TGAT ATCCGGCCCCG          TTTTTCGTTTTTATG 100 45
        aroA 1358722 .. 1358739 +  -4.1  -3.30243   AAGCGCTGTTCCGCG             CACAGGA CGTT TCCTCTG              TTGTCACAGATGCGT  51 43
         cmk 1359527 .. 1359562 +  -4.3  -3.31361   AAACAAAATTTGCGG    GAAATCTGACTGAAAA CGTGT TTTTTAGT-AGGTTTC    TGTATTCGTTTTTGT  51 42
        rpsA 1361421 .. 1361442 + -13.7   -4.4891   AGTAATTAAGCAGCG           GCAGGCCGC GCAA GCGGTCTGC            TTTTATGATAATCAG 100 36
        ihfB 1361783 .. 1361799 + -12.3  -5.40072   CAGAGATAATAAAAA              TGACGCC GCC GGCGTCA              TTTTTTTGCAAAAAA 100 48
JC861_RS06145 NONE
        msbA 1366202 .. 1366222 +  -3.9  -2.83715   ACAGCTCTATAATAT            GCAGTTTGG TCA CTAAGCGGC            TCTGCTGATGATCGA  45 10
        lpxK 1367208 .. 1367225 +    -2  -4.99638   TTCCTCATAAAAAAT             GCATAA AGGGGC TTGTGC              TTTTTATCTGAATGT  68 20
JC861_RS06160 NONE
JC861_RS06165 NONE
        kdsB 1368841 .. 1368881 +   -15  -3.45396   AGCGATATCAGTTAT AAACAAAAACGCGGG-TCA CTTC TGAACCCGCGTTTTTGTTG  TCTTCTATTCCTGTT 100 40
        cmoM NONE
        mukF NONE
        mukE NONE
        mukB 1377237 .. 1377264 + -16.4  -5.36441   GGGTTTTCTCTGAAA        CGGATGAGCGTA TGAC TGCGCTCATCCG         TTTTTTATATCAGCG 100 53
        aphA 1378964 .. 1378987 +  -9.6  -4.25527   CTGCCGGTCATATAA          CAACGCCG CCGGAGTA CGGCGTTG           TTTGTCTCTGTTTAT  88 48
        ldtD 1380999 .. 1381025 + -12.4  -5.64304   AGCTGATCATATTAA         GCCGCTTATTTA TTA TCAATAAGCGGC         TTTTTTCTTATATTA 100 35
JC861_RS06215 1381976 .. 1382020 +  -4.4  -2.59876   CATATGGATACAGGA CCGGTCAGAACGTGGTAAT CTGTTGTT ATTACC-CGTATTAACCGG AGTTTTGTGTCATGC  45 8
JC861_RS06220 1382705 .. 1382723 + -13.2  -5.24129   AGTAAAGATGAAAGG             TGCCTGAC GTT GTCAGGCA             TTTTTTATGAGCCGG 100 51
JC861_RS06250 1390432 .. 1390450 +  -2.3  -3.06583   CCACAGGTAGCATTT             TGGCCCA CATTC TGTGCCG             TGTTGGACATATTCT  42 83
        pepN 1393309 .. 1393324 +    -9   -6.3578   CTGATACAGACAAAA              CACCTC TCCG GAGGTG               TTTTTTTTTTGCACT 100 178
        pyrD 1395890 .. 1395912 +  -7.7   -4.5002   CACTATTATTCCTGT           CAGGGGG TTTATTTTT CCCCCTG           TTTCTTCTATATTTT  82 45
JC861_RS06270 1396727 .. 1396755 +  -8.8   -5.3236   ATTACGCCAAAAAAA        TACCCCCTGTGG TTTAT CTGCCGGGGGTA        TTTTTTATCGGTTAT 100 149
       rlmKL NONE
JC861_RS06285 1402096 .. 1402119 +  -8.9  -3.08211   ACGCTGGAAGCAATG          CAGAGCGGGA ACTGA TCCCGC-CTG          TGATTTTGGAGAAAT  69 11
        pqiA NONE
        pqiB NONE
        pqiC 1405660 .. 1405692 + -19.4  -3.41051   GTAAGTAATTTGTCA      TTCACTCTCTGCAC AGGGC GTGCAGAGAGTGAA      TTATCATCAAAATGA 100 33
         rmf 1406189 .. 1406204 + -10.4  -5.03314   TTGAAGGATAAAAAA              CCTCCG CATG CGGAGG               TTTTTTACGGATAAC 100 47
        matP 1409304 .. 1409329 + -14.9  -2.97166   GGAACGGACAAAAAA         TAAACCCCATC CGGA GATGGGGTTTA          TATAATTCATTGCAT 100 23
JC861_RS06335 1412163 .. 1412173 +  -8.2  -2.66711   GAACGTTATGATTTC                 CCCG GGG CGGG                 ATTATCCGTTCTGCG  63 58
        helD 1417024 .. 1417037 +  -3.1  -4.00038   TTGCGCTTAACCCAG               TCCAG TAAT TTGGA                TTTATAGTGATCATG  55 446
JC861_RS06355 1417664 .. 1417687 + -10.2  -3.25877   ATAAGCAAAAATAAA          GCCCCGGCAT GTGA GTGGCGGGGC           TCTTCGTGTATTAAT  78 37
JC861_RS06365 1418556 .. 1418614 +  -3.7  -2.92712   GTTTTGTCGCCTGTT TGGCGGGGCCTTTCGGAAACAGGCGGTA CAGA TAACGGCTGTTCCCGCGCT-CCTCGCCA TACTTCTGTGTGATC  45 83
JC861_RS06375 1419182 .. 1419197 +  -3.2  -3.61105   TCTTACAAGAAAATC              GCTTTC TTCT GAACGC               TGTTGTTATCTTTCT  51 93
JC861_RS06425 1430384 .. 1430399 +  -4.7  -4.43832   ATCAGGGTTATAATC              CGGAA AACCTA TTCCG               TTATTTTCTGTATTC  68 223
JC861_RS06430 NONE
JC861_RS06435 1432128 .. 1432138 +  -2.4  -3.53012   AGTAGCAGCTTCTAT                 CCGG TGC CAGG                 TTTCCGGCGGAAAGA  47 502
JC861_RS06450 1432766 .. 1432776 +    -4  -3.50854   TAATTACTAAAAAAA                 TATG AAT CATA                 TTGGTTAATTATTGT  52 21
JC861_RS06455 NONE
        fimA 1434432 .. 1434457 + -16.9  -3.60971   CCGTTAGCGCGTTAT         CAGTGGCCCGG GTGA CCGGGTCACTG          TTTGCCGATTGGAGT 100 62
JC861_RS06465 1435034 .. 1435045 +  -2.2  -3.70149   ATAATAATTAAATAC                TCTC TGCG GGGA                 TTTAAATAATGTACA  49 37
JC861_RS06470 1435742 .. 1435755 +  -2.5  -3.04032   CACCGGTAATCAGCG               TTAAT TCAT ATTAA                TCATTATTATCTTAT  43 12
JC861_RS06475 1438405 .. 1438416 +  -2.2  -3.93236   CCCGATCAGCAATAT                CAGT GCCC GCTG                 TTTATAACATTAATC  53 7
JC861_RS06480 NONE
JC861_RS06485 1440020 .. 1440030 +    -4  -4.19735   ACCTTTACGCTGGAA                 TATC TCT GATA                 TTTAATTTTCAGGAA  61 17
JC861_RS06490 1440808 .. 1440818 +  -8.2  -3.20218   TACATTTGCTGTACG                 CCGG TAT CCGG                 TATCATTTTTAATCC  67 3
JC861_RS06525 1448681 .. 1448693 +  -6.2  -4.60797   CGTCCAGAATTCACG                CCGG AACTG CCGG                TTTTCTGTCTGCCAG  77 443
JC861_RS06535 1451085 .. 1451124 +  -6.5  -5.61596   CAGACTGATATCACT  CAGATGACTGCCGTGGT GAGTAA ATCACGGTAGTAATCTA   TTTTTTTCTCCAGGT 100 33
JC861_RS06545 NONE
JC861_RS06550 1452998 .. 1453029 + -10.2  -2.64651   GCCGGTCTCCGTACT      GTACTCTGCTGACAG CGA CTGTCTGCAGGG-AC      TGACTTTGCAGGGTT  74 90
        speC NONE
JC861_RS06560 1455803 .. 1455824 +  -5.9   -2.8294   TTTCCATTCCTGTTG           GTTATCGGA CGAA TCAGATAAC            TCATTATACGGACTC  53 49
JC861_RS06565 1456914 .. 1456927 +  -3.1  -2.66216   AAGGATGATTGCCCG               CTGAT GCCG GTCAG                GTTATGCTCATGACC  42 33
JC861_RS06570 1457909 .. 1457920 +  -4.4  -4.27512   CGCGGTATTATCCGG                TGAG GTAT CTCA                 TTATTTATTCTCCGC  63 50
JC861_RS06580 1459895 .. 1459918 + -10.2  -5.40072   TGAGTTGCATTTCCT          GCCCCGCCGTC ACT GTCG-CGGGGC          TTTTTTTCACCCGCA 100 84
JC861_RS06590 1461646 .. 1461658 +  -4.8  -3.86015   CGTGAAACAAAACGA                CAGC CTTGC GCTG                TTTATCCGGAAAATA  60 292
JC861_RS06600 1462488 .. 1462502 +  -5.7   -4.3208   CAGGTATTATTCCCG               GTGTC CGGGA GACAC               TTTTCACTTCTGACA  70 113
JC861_RS06605 1462983 .. 1463004 + -13.7  -3.28712   TAACAGCAACCCCGG           CACCGGCGG TTAT TCGCCGGTG            TTATCCCGCAGCCAC 100 45
        yjiM NONE
JC861_RS06625 1466184 .. 1466195 +  -3.6  -3.19091   GGCAGCCGTAACCTC                CGGG GATC TCCG                 TTCATGAATGACTAT  48 7
JC861_RS06630 NONE
        nifJ NONE
JC861_RS06640 1470580 .. 1470602 +  -6.5  -2.92449   GAAAATAAATAATCA           TCAATAATA TTAAT TATTATTGA           TGTGTAAACTATTTC  56 29
JC861_RS06645 1471042 .. 1471062 + -15.5   -5.0925   CGCTGTTATTTTTAA            CGGGCTGTA TGA TACAGCCCG            TTTTTACTTTTCAGC 100 45
JC861_RS06655 NONE
JC861_RS06660 NONE
JC861_RS06665 1473642 .. 1473667 +  -9.9  -3.87373   GTCTGATAACACAAA         GCAGGA-AAAAC CAC GTTTTATCCTGC         TTTGTCAGCAATCTC  84 165
JC861_RS06700 1479804 .. 1479816 +  -2.7  -3.97042   GTTTTCATTTTAAAT                CAATG GGT TATTG                TTTGATTGCTCATCA  54 450
JC861_RS06705 1480791 .. 1480812 + -14.5  -3.58428   CAGATATATCTATTG           CAGGGCAGA TAAT TCTGCCCTG            TTAATTATCTTTAGG 100 41
JC861_RS06710 1481493 .. 1481503 +    -4  -3.76107   GAAAATTAAATCTGT                 TTCA GGC TGAA                 TTGTGATTTTTAAAT  57 9
JC861_RS06715 1484128 .. 1484161 +  -3.1  -3.08471   CCGCTGACCGGAATA     TGACA-ATACCGGCAG ATA CTGCCGGTAAATAGCA     TTAAGTGAGGTTATG  46 34
JC861_RS06720 1485204 .. 1485220 +    -5  -3.54935   TCTTTCTTTTTGCGG              CTGGCG TCTTC CGCCCG              TTTGCGGCGCATTTC  55 108
        smpB 1486692 .. 1486708 +    -3  -3.21099   CACGCAGGGCGTTAA             GTACTGG TATT CC-GTAC              TGATTTTCTGATATA  46 26
        ssrA 1487115 .. 1487138 + -14.6  -4.51238   CACCAAATAAAACAA          GGGGTTACGC GAAA GCGTAGCCCC           TTTGTCTTTTCTGAC 100 36
JC861_RS06745 1488386 .. 1488398 +  -7.7  -3.95073   TTAACTGAACTTTTT                GTGCA GAC TGCAC                TTTATCGATATACAG  72 512
JC861_RS06755 1489949 .. 1489967 +    -3  -3.30145   GATGCAGATACTGGC             GGATGCTG AAA CAGCACGC             TGATTTTTCCTGATT  47 4
JC861_RS06760 NONE
JC861_RS06765 1492970 .. 1493001 +   -13   -4.3467   CGGACTGTGAAGTGA      CCCCTGATAGCCGG ATAA CCGGTTATCGGGAG       TTTTAGTGTCAAAAT 100 45
JC861_RS20675 1497163 .. 1497212 +  -8.2  -4.78237   GACGGTAAAACGATA TGCAGAGATATAAAAAAACGGGGA AGAT TCCCCGTATTTTTAT-TG-CTGCA TTTTGTTATCAGATA 100 273
        grpE 1502794 .. 1502812 + -11.7  -4.90455   TTGTCAGTAATCACA             TGCCGCC GCAAG GGCGGCA             TTTTTGTACCTGTAT 100 57
        grcA 1504297 .. 1504312 + -10.4  -6.06529   TCCTTGTTCCGAAAA              CCACGC TCTG GCGTGG               TTTTTTTTATGTCTG 100 56
JC861_RS06825 1505260 .. 1505276 + -12.3  -4.61873   GTAAGCATAAAAAAA              CGGACTG TGA CAGTCCG              TTTTCGTTTATCAGA 100 37
JC861_RS06835 1507747 .. 1507771 +  -5.1  -5.40072   AATGTGTAATAAGGA          TCACAAAAAGG ATC CTTTTTTGTAA          TTTTTTTAAAAGAAA  84 225
        rpoE NONE
        rseA NONE
        rseB NONE
        rseC 1510639 .. 1510663 +   -13  -3.05022   ATGCGATTAAAAAAA          TAACAGCCTG AATAA CAGGCTGTTA          TCTGTCTCTCAGCGA  95 99
        lepA NONE
        lepB 1525857 .. 1525915 + -13.3   -4.3898   GTTGCGGGGAGCCAG TGCAAACGCAACAGTTTTGTA-TCGCGG TTTT TCGCGGCTACAGGTCTGTTGCGTGTGCG TTTTATAAACATCCT 100 114
         rnc NONE
         era NONE
        recO NONE
        pdxJ 1529048 .. 1529058 +  -8.2  -2.79842   ATGAAAACCCTGCTG                 CGGG AAG CCCG                 TCGTTAATGGCTATT  64 8
        acpS 1529458 .. 1529473 + -11.8  -4.21343   AATACCTGACAGTTG              CGCCCG GTTG CGGGCG               TTTCTGTCTGTTCAG 100 32
JC861_RS06910 NONE
JC861_RS06915 1531483 .. 1531499 +    -3  -3.30452   GTATTTGCCATCAGA              TATTCC AACCG GGGATA              TTAATGGTGTTCTTC  47 77
JC861_RS06920 1531953 .. 1531976 +   -14  -4.04206   GAGCTGTGTAAAAAA          TAACAGAGGG AATG CCCTCTGTTA           TTTATGTCAGAATAC 100 23
JC861_RS07015 1556184 .. 1556213 + -15.9  -3.32769   TAATGTGGCCACTGA       CACCACAAATTCC TCCG GGGATTTGTGGTG        TTCCTGCTTTACCGC 100 38
        vgrG NONE
JC861_RS07025 NONE
JC861_RS07030 NONE
JC861_RS07035 1562975 .. 1562995 +  -2.5  -3.03124   CGCTGACCCGTAGGG            CGAGTATCA GGA TGATACGAG            TATTCCGGACTGCAC  43 35
JC861_RS07040 NONE
JC861_RS07045 1564108 .. 1564128 +  -4.7  -3.13403   TTGCTGTTTAATTGC            CCGGATA TCCTCAC TGTCCGG            TATTAATACCAAACA  49 176
JC861_RS07055 1565299 .. 1565318 +  -5.7  -3.30124   TACGCGATGTAATAA            TGCCGGT AAGAAA ACCGGTA             TTATGACCGGTCAGG  57 81
JC861_RS07115 1576602 .. 1576617 +  -6.8  -5.60993   CAGAATAATACATAA              GGTCAC TGCG GTGGCC               TTTTTTTATGCGGAC 100 43
        trpS 1579213 .. 1579233 +  -3.3  -3.97368   GGTCTATTATACGAA            CCATATCTG TTT TATATATGG            TTTATCAGTTAAGGA  56 92
JC861_RS07125 NONE
         map 1580261 .. 1580282 +  -7.2  -5.60993   ACAACAGAGTGTAAA           AAGCCCGG CTGCGA CCGGGCTC            TTTTTTTATCAGAGC 100 56
JC861_RS07140 NONE
        leuE 1583269 .. 1583282 +  -2.3  -3.47573   AAGAAACTGCCTGCC               CGGCA AAAG TGACG                TTATACTGTGCCTGA  47 40
        tadA 1583859 .. 1583882 + -16.8  -4.45068   GTGATCAGTCTGGTG          CGGCAGAGGT CAGA ACCTCTGCCG           TTTCTTCTTCCGGCT 100 37
        purL 1589444 .. 1589471 + -10.6  -5.95539   TAGGCTGATAAACAG        GCGGGTATGACT TTTC AGTTTTACCCGC         TTTTTTTATTTACCA 100 33
JC861_RS07165 1592185 .. 1592196 +  -2.2  -4.36914   ATAAGCAACTACCGG                CGGA AAAT TCTG                 TTTTCTGCCGGCAGG  58 48
JC861_RS07170 NONE
JC861_RS07175 NONE
JC861_RS20695 NONE
JC861_RS20700 1597884 .. 1597922 + -14.7  -4.47551   GGCACCACCTTAATC  TCACTGGCGGGACGGCAG GAAA CTGTCGTCCCGCCA-TCA   TTTTATACCTTCCCT 100 496
JC861_RS07185 NONE
        qseG NONE
        glrR NONE
JC861_RS07200 NONE
        glnB 1603821 .. 1603851 +  -8.3  -5.76633   GGTCAATCATATTGA      TCCGGCGGCTGTTA TTTC TGACT-CCGCCGGA       TTTTTTTATCTGTCA 100 58
JC861_RS07210 1604275 .. 1604294 +  -8.6  -4.15654   ATTGACTTCAGCACG            TACGCTGA ATAC TCAGCGTG             TTGTTATTGTTGTTC  79 148
JC861_RS07220 1607152 .. 1607175 +  -8.9  -5.59879   CTGATGTAACCAAAA          CCCGCTT-CG TTCGC CGCAAGCGGG          TTTTTTGTATTTCTG 100 54
JC861_RS07225 1608374 .. 1608402 + -18.9  -3.32268   TAACAGCGGTAATAA        TACGGCACCGGCG CTG CCCCGGTGCCGTA        TTCTCAGAGTGATTC 100 52
        betI 1611236 .. 1611248 +  -4.1  -3.36273   ATGAAGCTGGGAACA                GATTG AAT CAGTC                TTAATATTAAAGGAA  51 20
        betB NONE
        betA 1614483 .. 1614503 + -14.1  -5.00616   CACTGAAATAAAAAA            CGGTGGTTA TGT TAACCACCG            TTTTTTAAAAGAGGG 100 48
        trmJ 1616261 .. 1616271 +  -2.4  -3.31263   CTTCACCATTTATCA                 CGGG GAT CCGG                 TTATGAGACTGACAT  45 97
        iscR 1616765 .. 1616778 +  -2.3  -3.14132   CAATCTGCAAGCATA               AGCAG AAAC CTGCG                TTAATAACGCAACCG  43 25
JC861_RS07265 1618016 .. 1618026 +  -5.4   -3.1506   ATTAACAGCATTGAA                 TGGT CAC ACCA                 TTAATCAGACGGTTT  53 11
        iscU 1618484 .. 1618521 +  -7.1  -3.00946   GGTAAAACAATAAAA   TAATGGCGGAT-ACTGAT CTC ATCGGTCATCCGCCATAC   TGGTTTATAGAGCGA  61 67
        iscA 1618850 .. 1618863 +  -2.3   -3.5594   CGAATGCGGCTGCGG               CGAGA GTTT TCACG                TTTAACCGATCCATT  47 7
        hscB NONE
        hscA NONE
         fdx NONE
        iscX 1621845 .. 1621896 + -13.3  -2.74192   AATGATGTCTTTTGT TACGCGCATCAG-G-CCGCAC AATTGTGTTAGC GTGCGGTCTCTGATGCGCGTA TGCTGTTACCGCCTC  93 36
        pepB 1623320 .. 1623341 + -12.3  -4.98522   GATTCTGCTGTAAAA           CGGTCACAC ACAC GTGTGGCCG            TTTTTCTGTAACATT 100 58
JC861_RS07305 1623838 .. 1623873 +  -8.6   -2.9856   TCCGGATGGTGAATA    TGTATGGTGCATATATT CAG AATA-ATGCACTATACG    CTTGTTTAGGCTTTG  65 51
JC861_RS07310 1629048 .. 1629073 + -10.6  -4.96848   CCTTTATAACAAACA         TGCCCTTATA ACAAAC TATAAGGGCA          TTTTTATCTCAGAAA 100 98
        pbpC 1631462 .. 1631472 +  -3.2  -2.78526   AAAGTGTGATACAGA                 CGGA AAA TCTG                 TGATCTGTTATCAGG  43 67
         ndk 1632115 .. 1632142 + -14.2  -4.56597   TCAGTGAATTCAGTC        TCAAAAGCCCGG TAAT CCGGGCTTTTGC         TTTTTACCGGACAAC 100 80
JC861_RS07330 1634049 .. 1634068 +    -5  -2.75992   CCGGTGAACCAATTT            CTGTCAAA ACAG TCTGACAG             TAATATTAAGTAACA  49 9
JC861_RS07335 1634571 .. 1634594 +  -6.7  -3.96148   ATACGGAACTTCGGT          GCGCGGAAGG GCAGA TC-TCCGCGC          TTTCTCGTAACCAGA  69 109
        rodZ 1635602 .. 1635618 +  -3.8  -3.77196   AGCCGGTGAATAATT              GATTTA TAAAT TAAATC              TTTACTACATAATAA  56 28
        ispG 1636811 .. 1636833 + -13.5  -4.78933   AAGAGTAATCGCGGA           CCGGCTCAT GACTG ATGAGCCGG           TTTTGTCTGTTTTGG 100 33
        hisS NONE
JC861_RS07355 NONE
        bamB 1640129 .. 1640151 + -12.7  -4.03321   GAGTGGTTTCATTGA           CGGCTCCTG AATGA CAGGGGCCG           TTTCGTCTTTAATCT 100 89
         der 1641729 .. 1641746 + -11.3  -5.71712   CGTTAACAAAGAAAA             CCCGCAT TTTA ATGCGGG              TTTTTTTATGTCCGG 100 35
JC861_RS07380 1644648 .. 1644662 +  -2.8  -4.00042   CACACGGCTGTTATC               CTGC AGATAGG GCAG               TTGTTTGATGACAAA  55 253
JC861_RS07390 1645625 .. 1645638 +  -2.4  -2.93164   CAATGACAGATGAAC               TTGC GGAATA GCAA                TGTAATTCCGTGTCA  42 45
JC861_RS07395 1646682 .. 1646709 + -11.2  -4.64464   TACATCCCTGTAAGC        TCAGGCGCGCCA TCCA TGGCGCGCATGC         TTTTCGTTTCCTTTG 100 103
JC861_RS07400 1647085 .. 1647109 +  -5.8  -2.89563   TATATAATTCCATAA          TGGTATAAGC AAATG GCTTGTATCA          CTTTACTGATATATG  53 64
        cysP NONE
        cysT NONE
        cysW NONE
JC861_RS07420 1650957 .. 1650975 +    -3  -3.84719   TCCGGTTGCATATTG             CCTTGCTG CGG CGGTATGG             TTTCAGTTTACGGCT  53 54
        cysM 1652375 .. 1652406 + -10.1  -2.93878   CAGAGGTATTGAGAT      GGCAGATGTCCCG GTATGG CGGGACACCTGCG       TATGATTAGCTATTG  73 512
JC861_RS07450 NONE
JC861_RS07455 1656190 .. 1656211 + -10.1  -4.71426   CGAAATAATACTGAA           CGGGAATCC TGAG GGCTTCCCG            TTTTCTTGATAACCG 100 33
        tssB NONE
        tssC NONE
JC861_RS07470 NONE
JC861_RS07475 1659969 .. 1659988 +  -4.2  -3.33151   AAACCCGGAGGCCGC            CGGTGCGT GACA ACACACTG             TATTACTTTGAACAG  51 16
JC861_RS07480 NONE
JC861_RS07485 NONE
JC861_RS07490 NONE
JC861_RS07495 NONE
        tssJ NONE
JC861_RS07505 NONE
        icmH 1667932 .. 1667944 +  -3.3  -3.21276   CAGCAAGTGAGTGAC                GCGCT GAC AGCCC                TGTTCTGAACAACGG  46 5
JC861_RS07515 1671159 .. 1671172 +  -9.5  -2.53449   CCGCTGACAGGTGAG               GGCGG AACA CCGCC                GTATTGTGGCACTCT  68 27
        vgrG NONE
JC861_RS07525 NONE
JC861_RS07530 NONE
JC861_RS07535 NONE
JC861_RS07540 1674937 .. 1674971 + -10.7  -3.76167   CGCTGAATCTGACAA     CCGGTGCTGTAGTGT AAAAG GCAGTACGGCGCCGG     TATTTTCCGTTATGC  88 35
JC861_RS07545 NONE
JC861_RS07550 1676962 .. 1676976 +  -2.7  -4.58466   GTCTTTATCTTCATC               CGCAG ATTGG CCGCG               TTTTCTGATTGTGCC  65 369
JC861_RS07560 1678653 .. 1678668 +  -7.5  -2.69647   ATAAGATTTGACTGT              CCGGC AACAGC GCCGG               TAGTGTATCACCGTT  58 56
JC861_RS07565 1679056 .. 1679072 +  -9.3  -2.66634   ATTTTCCCTGCCTGT              GCCGGCG GGT CACCGGC              TGATGTAATACACTG  68 1
JC861_RS07570 1679839 .. 1679858 + -13.6   -4.3207   CTGCGTATAAAAAAA            GGGTGAGC CGGA GCTCACCC             TTTCTGTCTTTATAT 100 20
        ttrB NONE
        ttrC NONE
        ttrA 1691660 .. 1691677 +  -7.7  -5.40072   TAATGCAATACCTCT             GACCACT TCCG GGTGGTC              TTTTTTTGGCCGCAG 100 88
JC861_RS07625 NONE
JC861_RS07630 1694558 .. 1694580 + -13.4  -3.13728   GTGTCAGAAAGCAAA           AAGCCCGCTC AGT GAGCGGGCTC           TTAAATCTGGCTCCT 100 362
        cspE 1696551 .. 1696572 + -11.5  -5.82281   CAAACCGAATTCCAA           GCCTGCCGC GTAA GTGGCGGGC            TTTTTTTATATCTTT 100 49
        dsrB 1696973 .. 1696997 +  -4.1  -5.37345   GGTACGATGATGGCG          GGCAGCACCTC TCT GTGGTACTGCA          TTTTTTATAATTACA  81 173
JC861_RS07670 1697932 .. 1697952 +  -8.2   -4.4458   AAACCTTAAGGTTTG            GCCGGTGG TAAAT CCACCAGC            TTTATTCTGTGTATC  87 85
        flhD NONE
        flhC 1701806 .. 1701826 +  -9.8  -2.78216   GATTGATTTGGTAAA            CAGGCAAA TTCGT TTTGCCTG            TCCTTCCTGAAAGTG  72 44
        motA NONE
        motB 1703854 .. 1703882 +  -3.1  -3.67597   AAAATTGGATAACCG        CGATGGATATAAC CGA GTTTTATCAAACG        TTCTTCGATGAAGCC  51 99
        cheA NONE
        cheW 1706414 .. 1706435 + -11.7  -3.14708   CACTGATCGACAGCA           TGGCTGAAT GATA ATTCAGCCA            TATAGTTTTGGTTAA  84 15
JC861_RS07710 1708223 .. 1708248 + -16.9  -4.42386   ACGCGTCTGTGCTTT         GCGCTGTCAGG GAAA CCTGACGGCGC          TTTTGTGCATCACAG 100 43
JC861_RS07715 1709902 .. 1709955 +  -3.8  -2.76227   GGCTGACGGTTCTGC TGA-TCCCCGCCCGCC-CCGGTTC-GT ATC GCAGACCCGGCGGCGGGCGGTAACTGA TCGGTTTGTATTGAA  45 35
JC861_RS07720 NONE
JC861_RS07725 1711899 .. 1711925 + -12.3  -2.92738   GCTGGGCAGACTTGC         TGCCGTTTCCG CCTGA CGGAACCGGCA         ATTATTCATTGTATT  93 10
        cheY NONE
JC861_RS07735 1713306 .. 1713334 +  -5.9  -5.06414   TATTTGTTACAGGTT        TCAGTGGCACCCG GAA CGGATGATGCTGA        TTTTTCTTCGCCGGA  86 306
        flhB NONE
        flhA 1716998 .. 1717023 + -14.7  -5.24796   ATATAACCACTCAAA         GGGGAACCCGC GCAA GCCGGTTCCCC          TTTTTGTTATATACG 100 50
        flgB NONE
        flgC NONE
JC861_RS07780 1720692 .. 1720707 +    -4  -3.53855   AAAAGAAAACCCAAT              TGTCAT GGAG GTGACA               TGTCTTTTTCACAAG  52 40
        flgE NONE
JC861_RS07790 NONE
        flgG 1723503 .. 1723533 + -14.7  -4.65895   ACAACTGTAATCCCT       GTCCCGGCGCTGA GATTA TCACCGCCGGGGC       TTTTTGACTGAGACA 100 31
JC861_RS07805 NONE
        flgJ 1726431 .. 1726470 +    -8  -3.38046   TTTTCTGACGGTTTC  CGGCGTAAAAAATGCAGTG AAA CACTAAAT-TTTTGCGCCG  TCTTTCCGATAACAA  66 33
        flgK NONE
        flgL 1729215 .. 1729233 + -11.7  -5.60993   GTACTGAATTCCTTT             GGCCGTC CCTGC GACGGCC             TTTTTTTGTGCCGGA 100 55
JC861_RS07830 1731127 .. 1731155 +   -14   -5.7946   ACGCCATTACCGGAG        CCGGTAATCACT TTCTC GGTGATTACCGG        TTTTTTTATTAACAG 100 94
        fliE 1743124 .. 1743136 +  -3.4  -3.69359   GATAATTGTGATTAC                CATG TTTGC CATG                TTCTATACTTTTAGT  51 352
JC861_RS07905 1743778 .. 1743791 +  -9.5  -4.61482   GGTAAGAGTAAATCA               GCCCC GGAA GGGGC                TTATTTTTTGCCGGA 100 55
JC861_RS07910 1744725 .. 1744748 +   -14  -4.42653   GTCAACCGGCAGAAA          CAATAAGCCC GGCG GGGCTTATTG           TTTTATCAGTCCGGT 100 49
JC861_RS07920 1746154 .. 1746178 +  -7.9  -4.74801   GCAGATAAATAAAGA         GAGCGGG-TC ACTTCA GATCCCGCTC          TTTTTGATCGGCTTA  91 62
JC861_RS07930 NONE
        crcB NONE
JC861_RS07940 1748110 .. 1748162 +    -5  -6.00814   AAATACCGCCGGATA G--TAAAAAGTTCCTGCCGGACAG GGAACAA CTGTCCGGCAGGAACTGATCAGGC TTTTTTTTCATTATT 100 25
JC861_RS07960 1751966 .. 1751985 + -13.6  -5.76633   CTGTTTTTTATTTTG            GCCGGAAC CTCT GTTCCGGC             TTTTTTTATGTCTGA 100 68
JC861_RS07965 1753286 .. 1753303 +  -9.9  -5.65177   TTAAGGTATTTAAAA             GGTCAGA ATAT TCTGACC              TTTTTTTATAGATGT 100 55
JC861_RS07970 1754353 .. 1754365 +  -3.4  -3.53012   GACTACACAAGGCGC                CAGA ATATG TCTG                TTTCAAAACAAAAGA  49 76
        fliZ 1754915 .. 1754930 +    -9  -4.87318   TACTGATAAAACAAA              GGGAAC TTTC GTTCCC               TTTTTCCGTTTTAAG 100 69
        putP 1760978 .. 1760994 +  -5.7  -6.08342   TAGTCTGAAAAAAAA              ATCCGGC GTT GCCGGGA              TTTTTTTGTTTATTA 100 43
JC861_RS20710 1763419 .. 1763431 +  -4.7  -4.62085   CTGCGGGGAATACTG                CCGTG CCG CCCGG                TTATTTTTTGGCAAT  71 65
JC861_RS08020 NONE
JC861_RS08025 1768414 .. 1768426 +  -4.7  -2.90212   AATTGCGGTGATAAA                GGCGG GAA CCGCA                TCTGTCAGGTCATCC  47 239
        adeD 1771572 .. 1771596 + -15.1  -3.32844   GCATAAACGGAAAAA          GGACAGAGACG GTC TGTCTCTGTCC          TTATGAACTACAGCA 100 35
      aac(3) 1775667 .. 1775691 + -11.3  -4.73682   GGGGTAACCGGTGAA          CCGGTGCGGCG GAT CACCACACCGG          TTTTCTGTTATCAGG 100 34
        metC 1779371 .. 1779393 + -14.9  -3.29144   TGAGATAGAAAAGAA           TCAGCCCGG GGTGA CCGGGCTGA           TTCTCAGAAAGGTGA 100 38
        gyrA 1788418 .. 1788442 + -15.9  -5.27335   AGAAAAACCGATAAA          GCAGGAACAAT AAT ATTGTTCCTGC          TTTTTATTTACCCCG 100 68
        rcsC 1791422 .. 1791441 + -12.2  -4.67353   AGCCGGATAAAAAAA            CGCCATTC ATCT GAATGGCG             TTTTTGCATCGGTAC 100 52
JC861_RS08130 NONE
JC861_RS08135 1795215 .. 1795241 +   -11  -5.58522   CGGCACCATATTAAA         CCCGTTATATTT CAC AGATATAGCGGG         TTTTTCTTTTCTATA 100 33
JC861_RS08215 1805178 .. 1805200 + -10.6  -2.83345   CTGGTTAACTCACCA           TAGCCCACTC ACC GAATGGGCTA           TAATTAGTATCTGCG  75 33
JC861_RS08220 1805991 .. 1806011 +  -2.5  -4.59919   ATAGGCACAAAAAAG           CCCTC-GC GGGAGG GCTGGGGG            TTATTTTTCTGATTT  64 37
JC861_RS08240 1808483 .. 1808497 +  -2.8  -2.52623   AACCAAAAATCAGTA               GCTG AACGGCA CAGC               ATATTGTCGGGCGGG  41 44
JC861_RS08245 1809011 .. 1809030 +    -5  -5.14965   CAGTGATTTAGGAAA            GGGGAA TATACGGT TTCCCC             TTTTTTGATACAGAT  80 66
JC861_RS08260 NONE
JC861_RS08265 NONE
JC861_RS08270 NONE
JC861_RS08275 NONE
JC861_RS08280 1812309 .. 1812319 +  -6.8  -3.34013   AAGTGTCCGCACAGA                 GGCT AAA AGCC                 TTGCTTACGGCGATA  61 334
JC861_RS20725 1812953 .. 1812963 +  -5.4  -3.16564   CCTGCACGGATGCTA                 TCAG TTA CTGA                 TTGGTAAGATACAAC  53 105
JC861_RS08295 NONE
JC861_RS08300 NONE
JC861_RS08305 1815322 .. 1815337 + -10.4  -4.84527   GAAGCATGCATAACA              GCCCTC TCCG GAGGGC               TTTTTCATATCTGCA 100 305
JC861_RS08310 1815810 .. 1815822 +  -3.3  -2.50779   TCAGCGCAGAGATAC                TGTGC GCG GCACC                CTATTAACTTCTAAT  42 77
JC861_RS08315 NONE
JC861_RS08320 NONE
JC861_RS08325 NONE
JC861_RS08330 1817267 .. 1817286 + -11.4  -4.59773   AGATAGAACAGCAAC            GCCTCGCT AAAT AGCGGGGC             TTTTTACGAATAACC 100 16
JC861_RS08335 1817726 .. 1817740 +  -8.5  -5.60689   CATCAATTTTAGGAA               CCCGC CAAGC GCGGG               TTTTTTATTGTCTGC 100 45
JC861_RS08340 1818664 .. 1818674 +    -4  -3.10056   AGTTGAGAATCGCTC                 TATC AAG GATA                 TCTTCGATGGCTAAT  49 1
JC861_RS08345 1820007 .. 1820023 +  -4.3  -2.95223   GGACTGCAAATCAAC              CCCGCAG CAC TTGCAGG              TATCTGATGAAATTA  47 2
JC861_RS08350 NONE
JC861_RS08355 1822303 .. 1822318 +  -3.2  -3.04398   ATTGCCGGTGCGGCA              GCAAGG CTAT CCTTCC               ATTTTAAACAGAGGG  44 3
JC861_RS08360 NONE
JC861_RS08365 NONE
JC861_RS08370 NONE
JC861_RS08375 1825493 .. 1825508 + -10.4  -5.28176   TCGTTGTTAATCACT              GCCACC TTCG GGTGGC               TTTTTTATAGGTGGA 100 50
JC861_RS08380 NONE
JC861_RS08385 NONE
JC861_RS08390 NONE
JC861_RS08395 NONE
JC861_RS08400 NONE
JC861_RS08405 NONE
JC861_RS08410 NONE
JC861_RS08415 1830266 .. 1830277 +  -7.2  -5.60993   TACAGAAAGATAACA                GGCC GTAA GGCC                 TTTTTTTATGGGGCA 100 230
JC861_RS08420 NONE
JC861_RS08425 1833365 .. 1833375 +  -3.2  -3.06796   AGTAACAGCATCACG                 CCAT CAA GTGG                 TTAAATAAGGTAGGA  44 113
JC861_RS08430 NONE
JC861_RS08435 1834300 .. 1834313 +  -9.5  -3.34043   CCCATAAACGACTAA               GCCCC GGAA GGGGC                TTATCCGGTGCTGAG  74 94
JC861_RS08440 NONE
JC861_RS08445 1835276 .. 1835289 +  -9.5   -5.4833   TCAAATGAAGATTAA               CCCGC TCAG GCGGG                TTTTTTGTTGCCTGC 100 26
JC861_RS08450 NONE
JC861_RS08455 NONE
JC861_RS08460 NONE
JC861_RS08465 NONE
JC861_RS08470 NONE
JC861_RS08475 NONE
JC861_RS08480 NONE
JC861_RS08485 NONE
JC861_RS08490 1842539 .. 1842563 + -18.7  -5.46706   GGCACCATATTAAAA          CCCGCGATATC TTT GATATCGCGGG          TTTTTCTTTTGCGCT 100 481
JC861_RS08505 1844270 .. 1844303 +  -3.3   -4.8236   ACATTGGTTATTTTG     TTCTGACTAACG-TTA ATG TAATCGTTTGTCAAAA     TTATTTTTTTCAGTA  68 510
JC861_RS08525 1846884 .. 1846898 +  -4.2  -2.78216   CAGATAACCACTAAT               TCTGTG TTT CACTGA               TAGTTGCTCCGGATA  46 27
JC861_RS08530 1847558 .. 1847579 +  -8.7  -5.19879   TTTGATATATCAAAA           GGCACTCAGG ACA CC-GGGTGCC           TTTTTGTATTTCCGG 100 57
JC861_RS08540 NONE
JC861_RS08545 NONE
JC861_RS08550 1850861 .. 1850876 + -11.8  -5.02074   AATCGTTAATCACAG              GCGGGC TGCG GCCCGC               TTTTTTACGGAATAA 100 32
JC861_RS08555 NONE
JC861_RS08560 NONE
JC861_RS08565 NONE
JC861_RS08570 NONE
JC861_RS08575 NONE
JC861_RS08580 NONE
JC861_RS08585 NONE
JC861_RS08590 1857256 .. 1857278 +  -4.8   -3.1944   GCAGCGCGGTTCAGG           TGGTGTTTGT ATG ACACACTCCA           TTCAGTCGTTTTCAT  51 12
JC861_RS08595 NONE
JC861_RS08600 1859193 .. 1859219 +  -9.4  -3.21354   CAGTGAATATGCGTA         CCGGCGGGAAAT ATT GTTTCTCTCCGG         TTACTGCCTGTATCA  72 52
JC861_RS08610 1860647 .. 1860663 +  -2.2  -3.62535   GTATCCGTAAATTCT             G-CTCCG GTGC CGGGGAC              TTATCTGCTGTTTAC  49 86
JC861_RS08615 1861298 .. 1861310 +  -2.7  -3.08679   GCCATTGCGGAGGAA                TAATG CGT CGTTA                TATTACCTGGCCGGG  44 41
JC861_RS08620 1862353 .. 1862375 +    -2  -3.18735   GGTGACAATATAAAA           TACCGTAAGT GGA ATTTATGGCA           TTACTGAGGTGTTCA  43 491
JC861_RS08635 1863123 .. 1863137 +  -6.4  -3.81951   GTCCGGACTGCGGAT               TTCGGA TTA TCCGAG               TTTAATACTGTCAGA  63 50
JC861_RS08645 1864459 .. 1864494 +   -17  -3.36492   CAAAATAAGTATTAT    CAG-ACTGCCGGTGCTG ATA CATCACCGGCAGTACTG    TTATACGGTTAACGG 100 33
JC861_RS08660 1866571 .. 1866585 +  -2.1  -4.07885   GTCAGGATCTCTGAT               TTAGC CTGGC GCTGA               TTTTGGGAGGAGATC  56 27
JC861_RS08675 1869247 .. 1869263 +  -2.2  -4.57569   GGCGTCCACCGGATG              CTGTCA TTCCC TGCCAG              TTTTTAAAGGAATCG  63 508
JC861_RS08695 NONE
JC861_RS08700 1872677 .. 1872694 +  -7.7  -3.54653   TGATAGCGGCCATCG             GCC-GGAG CAT CTCCAGGC             TTATCTGATGCAGCT  64 112
JC861_RS08725 1877187 .. 1877211 +  -4.1  -4.56597   GCTGTTCTGTCCCCA          CGGACGGGAGC CCT GATCCAGTGCG          TTTTTCAGCACACCG  67 302
JC861_RS08735 1879746 .. 1879771 +  -8.9  -5.24129   ACCGTATATTACTCA         GCGGCTTTTCG TTTA CGGGCAGCCGC          TTTTTTGTGCACGGC 100 77
        guaB 1882886 .. 1882907 +  -5.1  -4.32579   ACTCAGCTGATCGCG           CGCCG-TATC CGT GAAATCGGCG           TTTATTGTGAACTGT  68 157
JC861_RS08755 1885623 .. 1885648 + -14.1  -5.63504   CAGATAACAGCGTTA         TAACCGGGGAG GTCA CTCTCCGGTTA          TTTTTTTATGACGTT 100 34
JC861_RS08760 NONE
JC861_RS08765 1889274 .. 1889299 +   -12  -2.64091   CAGGAAATAAAAAAA         TCCGGCAATA AATAAG TATTGCCGGA          TAGTATCAGATAATT  83 43
        rlmA NONE
JC861_RS08835 NONE
JC861_RS08840 1906090 .. 1906107 + -12.7  -4.46073   GTTAAACCGTAAAAA             GGCGTGC AACT GCACGCC              TTTGTTATATTCAGC 100 52
        ftnA 1907129 .. 1907164 +   -10   -5.4659   TTATTTATAATATAA    CCACACAATTATCA-TA ATA TACTGATATTTGTGTGG    TTTTTATTTGTGTTA 100 59
        copC NONE
        copD NONE
JC861_RS08865 1909130 .. 1909144 + -11.4  -4.65895   GCAATTTTAGCGCAC               GGCTCG CTA CGAGCC               TTTTTCCCTGGACCG 100 208
JC861_RS08870 NONE
        proQ NONE
         prc 1912710 .. 1912731 + -10.2  -5.93809   ACATAAATAAAAAAA           TCGACAGC ATTTGA GCTGTCGA            TTTTTTTTGTGCCGC 100 59
JC861_RS08885 NONE
JC861_RS08890 1914061 .. 1914088 +  -9.8  -4.42238   CACATCCGTGTGCGC        TCAGGCGCGTCA TCCG TGACGCGCATGC         TTTTCGTTGACCTGC 100 101
JC861_RS08900 NONE
JC861_RS08905 1920156 .. 1920177 +  -5.9  -2.79239   CAGCATTAATTGCCA           G-GCCGGAAA TTA TTTCCGGTAC           TCAGTTTTAATCTGA  53 200
JC861_RS08915 NONE
JC861_RS08920 1921935 .. 1921959 + -11.5  -3.80595   CCTCTCTGATATTTC          TCCGGTGAC CGTCAGT GTCACCGGA          TATTTTCCTGTCTGT  95 49
JC861_RS08925 1922528 .. 1922545 +  -8.4  -5.00616   TGACAGGAACGGAAA             GGTCCG CAAACA CGGACC              TTTTTTGCAGAAGAC 100 47
JC861_RS08935 1923770 .. 1923807 +  -3.3  -3.71924   TTCAGCCCGGCAGCC   AGTTGCTGTGC-GGCGCG CAG CGGGCCTGCACGGTAAAA   TTGTTCACTGATTTG  53 269
JC861_RS08945 NONE
JC861_RS08950 1925809 .. 1925830 +  -2.3  -3.79678   ATCTCATCGATCATC           TCAT-CAACC AGT GGATGCATGA           TTATTCTCCAAAATT  51 176
        phoH 1928113 .. 1928137 + -12.8   -2.7439   AACTGATTCACAGCA          GCTGCGGCAG AGAAC CCGCCGCAGC          CTGTTTATCATCAGT  91 35
JC861_RS08990 1933249 .. 1933267 + -14.6  -4.07568   ACAGAGATAAAAAAA             CGGGCACT GAA AGTGCCCG             TTTTGCCGAAAACAG 100 72
JC861_RS09000 1934611 .. 1934628 +  -2.7  -3.85254   TCAGGCAGGTTATAA             GCAAC AGGATTGC GTTGC              TGTTTTGTGATGATG  52 80
JC861_RS09005 1935766 .. 1935777 +  -2.2  -3.64822   TGTATTCATTCTCTC                TGCG GGTT CGTA                 TTTCAATGAAAAAAT  49 138
JC861_RS09010 NONE
JC861_RS09015 1938872 .. 1938882 +  -2.4  -3.31157   TAAAAACAGCGTTAT                 CTGC GGG GCTG                 TTAATGTCCTCGTTA  45 56
JC861_RS09020 1940032 .. 1940063 + -13.8  -4.31835   GGGCATCAATAATAA      CAGGTTCCGGTG ACTGAATC CGCCGGAACCTG       TTTATTATCAGACTT 100 104
JC861_RS09070 1951497 .. 1951508 +  -7.2  -4.81551   CCAGGGAATATTTCC                CCGG GATG CCGG                 TTTTTCATATAAATA  85 184
JC861_RS20750 NONE
JC861_RS20755 1952893 .. 1952927 +  -9.5  -5.07053   GGATTGTAAGTATCC    CAATAAAAATCCACGC AATA GCGTGGA-TTTTATGG     TTTTTTACGATGCTT 100 98
JC861_RS09090 1955359 .. 1955374 +  -7.6   -3.1876   ACGGGTGTCATAAAA              TAACCG GGAA CGGTTA               TTACTCACTGCGGTT  63 42
        hemA NONE
        prfA NONE
        prmC NONE
       sirB1 1962257 .. 1962273 +  -2.9  -2.50113   CCACACATACGAACA              GCAGCAT ATC GTTCTGC              ATTAATAAACTGATA  41 4
        kdsA NONE
JC861_RS09135 1964203 .. 1964215 +  -3.4   -5.1356   ATTCCTGTTTAAATT                TTCC GGCAA GGAA                TTTTTCTTCCTGCGG  77 123
        ghrA NONE
JC861_RS09160 1968690 .. 1968707 + -12.7  -5.36441   ACGTGTTATTCCCGG             CCCGGTC AGAT GACCGGG              TTTTTTGTATCAGGC 100 55
        rimJ 1973051 .. 1973061 +    -4   -4.2008   TATCTGACCAGCACA                 TTCA GCA TGAA                 TTTATTGAAATCTCT  61 94
        murJ 1974614 .. 1974633 +   -15  -5.19879   TTTATTTCATTCTGA            CGGGGCTG ATAA CAGCCCCG             TTTTTGTATTTCCCG 100 47
        uhpC 1976476 .. 1976497 + -10.2  -5.36441   AATATGGTGTACGGA           GCCTGATG ATAAAC CATCAGGC            TTTTTTATATCCGGA 100 50
JC861_RS09200 1978272 .. 1978287 +    -9   -5.0133   GAAGACAATAAAAAA              GGAACC GGAT GGTTCC               TTTTTTGCAGAAATA 100 49
JC861_RS09210 NONE
        cutC 1981718 .. 1981736 + -14.6  -4.34402   CGGTTAAATCAAAAA             CGCCCTCA TAT TGAGGGCG             TTTTGCTGTCAGAAG 100 54
        aspS NONE
        nudB 1988748 .. 1988764 +  -7.9   -3.6682   TCGTCAGTGTGTTCT              TCCGCAG TGA CAGCGGA              TTTAAATGAATGAAC  70 16
JC861_RS09250 1989571 .. 1989601 +   -12   -5.3472   CCGTCACTCACTCCG      CAGA-GGATGCGC TGTTGT GCGCATCCCTCTG       TTTTCTTTATTTTTT 100 44
        ruvC 1990199 .. 1990216 +  -7.7  -5.69473   CGTGATTTTCTGATG             GCTGGAT ATAC GTCCAGC              TTTTTTTATGCTATA 100 58
        ruvA NONE
        ruvB 1991934 .. 1991953 + -12.1  -3.29543   AAATAATTAATAATC            CGGCCGG TTTATT CCGGCCG             TAATTTTTCCTGATA  89 31
JC861_RS09270 1992930 .. 1992957 + -21.4  -3.02511   TGATGATGTCAGACA        CCAAACGCCCGG TTTG CCGGGCGTTTGG         TATTCAGAAAATAAA 100 81
JC861_RS09275 NONE
JC861_RS09280 1993957 .. 1993980 +  -6.7  -5.07275   GTACTACTGCAAAAA          GCCCTGACA GCTCAA TATCAGGGC           TTTTTCTGTATATGA  86 170
        znuA NONE
        mepM 1997996 .. 1998031 +   -14  -4.11216   GATTAATCCTCTCAT    TTCGCCGGACGGGTAT GAAG AAACCCGTCCGGTGCA     TTTTCAGAATGCAGA 100 35
        lpxM 1999117 .. 1999135 +   -11  -3.30619   TATAAACACAAAGAA             TTGCCCTG AGA CGGGGCAA             TTCTCAGGCCTGATT  81 17
JC861_RS09315 2000573 .. 2000591 +  -4.6  -3.64487   TGCATGCGCAACCTT             GTTACG TAGGTGC CGTAAC             TTATTGAAAATATCC  55 288
         zwf 2007596 .. 2007624 + -12.6  -5.29782   ATATTTGCGTAATTA        TGACCATCTTCT GAATA AGAAGGTGGTCA        TTTTTTATAACTGTC 100 82
        mdtJ NONE
        mdtI 2008764 .. 2008789 + -14.9  -5.38047   CTGTCATTATCTGAA         TCCGGAAATAC ATCT GTATTTCCGGA          TTTTTTATGTCAGTA 100 75
JC861_RS09355 NONE
JC861_RS09360 NONE
JC861_RS09365 2012492 .. 2012513 +  -8.7  -2.73364   GATAACGGATCTGAG           GTGTCACGT TCAG GCGTGGCAC            TGGTCTGCTGTTTTT  66 46
JC861_RS09370 NONE
JC861_RS09375 2014628 .. 2014646 +  -2.5  -2.65766   ATGTTCAGTCCCTTT            C-ATGACA AATT TGTCATCG             TCCTGTCAGCTTTAA  41 21
        msrP NONE
JC861_RS09385 2016705 .. 2016728 +  -4.4  -3.93963   AACCGAATGTATATT          GCCATCGCGG TATT CCACGGTGCC           TTTCTCGGTCATGAT  60 383
JC861_RS09395 2017954 .. 2017967 +  -5.2  -2.52896   AATACAAAAAAGTGA               CCGC CGTTAT GCGG                TCACTTAACAGATCA  49 169
        lsrR NONE
        lsrK 2027187 .. 2027209 +  -6.2  -4.47551   GAGGATTTTGCTTTT           ATCTGAACCG GCG CGGGTCAGAA           TTTTATCAATTGCGT  74 392
JC861_RS09445 2029406 .. 2029420 +  -6.4  -5.80364   GTTTTGCAATAAAAG               TCACTG TTA CGGTGA               TTTTTTTGTTACCAT 100 51
        tsaB 2030623 .. 2030636 +  -2.4  -3.96148   GTCGTTTCAGTTAAG               TCAG ACATTG CTGA                TTTATCCTGAACAGC  54 482
JC861_RS09490 2045959 .. 2045976 +  -4.1  -2.64616   TTGAACCGGCAATCA             TCAGTCA TAAT TGACGGA              TACTATCCGTCACAG  45 114
JC861_RS09495 2046716 .. 2046737 + -11.5  -2.93734   ACAACTAATAAATTA           AGAGGCGGC ATTT GCCGCCTCG            ATTGTTATCTGGCTT  83 148
        fadD 2048600 .. 2048648 +   -14  -3.84639   CATGACACGGCATCA GACCGCAGAATAACGACGCCGGT ATTT ACCGGCGTCGTTATGAT-CAGTC TTGTTGTGACTATTG 100 36
         rnd 2049898 .. 2049920 + -16.3  -3.35996   ATAGACAGCAAAAAA           CACGGCGGG ATATA CCCGCCGTG           TTATCAGTCACAGTA 100 37
JC861_RS09525 NONE
JC861_RS09530 2053342 .. 2053353 +  -7.2  -2.66435   GCGGATAATGTCGGC                GCGG AAAT CCGC                 TGATGTCATCAGAAT  58 11
JC861_RS09535 NONE
JC861_RS09540 2054511 .. 2054522 +  -3.6  -4.27686   CATATTCTGAATAAG                CCTG AGGG CGGG                 TTTTAACTGCTTTTG  63 8
        hxsD NONE
        hxsB NONE
        hxsC NONE
        hxsA NONE
JC861_RS09565 2058605 .. 2058641 + -16.8  -4.10007   TAAACAGGTAATTTA    TGAAAACCACCGGACT CAACA AATCCGGTGGTTTTCA    TTTTCACGACATTAT 100 139
JC861_RS09595 2063490 .. 2063515 + -18.3  -3.66178   TGAGAAATAAAAAAA         TCCCCGTCCGG ATTT CCGGGCGGGGA          TTTGAGATTGCAGGC 100 38
        norV 2069043 .. 2069056 +  -2.3  -2.60904   TCCTGGCAACGGAGG               CGGCA TGAG TGCAG                GTATTGTGATTATCG  40 18
        norW NONE
        ytfE 2071317 .. 2071338 + -11.7  -4.70319   TTATAAATGAAAAAA           TCAAACACC CGGA GGTGTTTGA            TTTTAATTTTCGTCA 100 459
JC861_RS09640 NONE
JC861_RS09645 NONE
JC861_RS09650 2077128 .. 2077139 +  -5.8  -3.09492   TAACGCATTTGCAGA                CAGC TGAC GCTG                 TGTTAAGGTTCCGCC  53 501
        hrpA 2081725 .. 2081741 + -13.7  -2.93891   AGAGGAGACAAAAAA              GCCGGTC TGT GACCGGC              TCCTGTTTTCACGGT 100 249
        pntA NONE
        pntB 2087710 .. 2087729 + -13.6  -5.28778   GGATAAAATGAAAAA            GGCGGGAA TTAT TTCCCGCC             TTTTTTATGCATAAT 100 45
JC861_RS09695 2091233 .. 2091246 +  -3.9  -4.01603   ACAAATCGTGCTATT               TTAGA TATA TCTAA                TTTGATCTTTCCATA  58 146
JC861_RS09700 NONE
JC861_RS09705 2092726 .. 2092738 +  -4.7  -3.62096   CCGCAGGGGAAGATA                GCCCG TCA CAGGC                TTTGAGCTGATGAAA  55 437
        malI NONE
JC861_RS09725 2097082 .. 2097092 +  -2.4  -3.84271   TCCGGCACTGTTGCT                 CGCG TAA CCCG                 TTGTTCCTGTTATGA  51 118
JC861_RS09730 NONE
JC861_RS09735 2098524 .. 2098547 +  -3.8  -5.43866   TACAGGCACGCCGCT          GATCACGGTA TTTA TACGGGGATC           TTTTTTTGCGGATTC  84 24
JC861_RS09740 2099961 .. 2099975 +  -2.8  -2.73619   CTGTTCAAACCTGTT               GTTAAC CAT GCTAAC               GTTTACCCACTGATT  42 96
JC861_RS09745 2100655 .. 2100667 +  -2.6  -2.56475   GAAGGTGTGATCGGG                CTGG TAAAT CCGG                ATTGATCTGCGGTTC  41 8
JC861_RS09750 2101797 .. 2101820 +  -8.8  -5.76633   TCGGTACTGATAAAA          CCACGCGGTG AAAA CATAGCGTGG           TTTTTTTATATCTCA 100 55
JC861_RS09755 2103062 .. 2103083 +  -4.3  -3.02371   TTTTACTGCCATCTG           TCAGCGCTG GAAT CTCCGCTGA            TGCTTATTTACCGGG  47 4
JC861_RS09760 2104411 .. 2104436 +  -2.6  -3.26042   GAGGACGTGTACTAA         TTCATGATAC AAAACA GTAGCATGGA          ATTGTTTTTCACTAC  43 211
JC861_RS09775 NONE
JC861_RS09780 2107801 .. 2107834 + -10.5  -4.13654   AAATAATACAATTCT     GTATATTGTTTTCTC CTCA GAGAAAACGATTTAC      TTTGTGATTTCACCG  91 95
        mgtA NONE
JC861_RS09790 2111688 .. 2111710 +    -2  -3.82117   TTTAGACTTGACGGT           GGATTTGACT TAA AGTTAGGTTC           TGTTTTCTGACTGGG  51 41
JC861_RS09795 2112958 .. 2112983 + -10.6  -4.52047   AAAGGCTCTGAGCCA         TTCCGGTAAA GTGGAG TTTACCGGAA          TTTTATAATCTGATA 100 55
JC861_RS09815 2116699 .. 2116711 +  -3.5  -5.48213   CCAATATCTTTAAAA                TTATT AGC AATAA                TTTTTATTTTAAATG  84 334
JC861_RS09825 2117937 .. 2117949 +  -3.3  -3.39288   GATAATTGTCATACC                CCGGA GTT TACGG                TATTCTTCCCAGATC  47 64
JC861_RS09830 2118284 .. 2118294 +  -8.2  -4.19953   GCTTCCGTCATTTCT                 CCGG AAA CCGG                 TTTTCCGGTTAAATC  79 57
JC861_RS09845 2121862 .. 2121885 +    -6  -4.19817   CTCACCGAACAGCCC          CTGCGGATTA GCAT TAATCTGCTG           TTTTGAATAACTCGC  70 470
JC861_RS09855 2124376 .. 2124389 +  -2.3  -2.64794   TGCATAAACTGAGCC               GCGAC GGAG GTCAC                TGATATGGGATTAAC  40 9
JC861_RS09860 NONE
JC861_RS09865 NONE
JC861_RS09870 NONE
JC861_RS09875 NONE
JC861_RS09880 2129638 .. 2129666 + -20.3  -4.59773   CTTATTGTAGCCTTA        TCCGGCGGCATCG TTC CGGTGCCGCCGGG        TTTTTAACAATGCAG 100 31
JC861_RS09885 2132068 .. 2132082 +  -6.4  -4.56597   CCGGTCATTTATTAC               CGGTGT GAC ATACCG               TTTTTAACCGGCAAC  74 4
JC861_RS09890 NONE
JC861_RS09895 NONE
JC861_RS09900 2134738 .. 2134765 + -12.8  -3.72788   TCCGGCCGTAAAAAA        TAACCCGGC-GCG GTT TGCTGCCGGGTTA        TTGTCTGTTATGCCA 100 30
JC861_RS09925 2139653 .. 2139689 + -15.5  -3.61232   TCGGATAAACAGGAT    TATAGTTGCAAATACAA CGA TTGCATTTGCAACTATA    TATTTATCTGAAACG 100 56
JC861_RS09930 NONE
JC861_RS09935 2140706 .. 2140737 + -13.7  -3.96327   TTAAATAAGCTGACT      GCCTGCGGCGCCGG ATTTA CCGG-GCCGCAGAC      TTTGTACTCAGCGCT 100 33
JC861_RS09950 2143587 .. 2143603 + -12.3   -4.0641   TGACCCGTGAATAAA              TGCGGAG TTT CTCCGCA              TTTATGTCCGTGCGG 100 41
JC861_RS09960 NONE
JC861_RS09965 NONE
JC861_RS09970 NONE
JC861_RS09975 2148834 .. 2148849 +  -2.6  -4.37092   GGGTTTAAGGAAAGT              TAGACT ATTT AGTTTA               TTTTATCGGGCAACT  59 52
JC861_RS09980 NONE
JC861_RS09985 2153060 .. 2153086 +  -3.1  -4.56597   CGACCGGGATGTGAA        GG-AGTGGTATT GAAG AATACCAGTACC         TTTTTGCCGAAAAAC  63 13
JC861_RS09990 NONE
JC861_RS09995 2153960 .. 2153977 + -11.3  -4.62471   TTCTCTGACGTAAAA             GGCCTTC ATCC GAAGGCC              TTTTCTGTATCACTT 100 48
JC861_RS10035 2162401 .. 2162427 +    -5  -5.65177   TCACAATAATACCTG         CTGCGGTGGCAT TCT GTGTCACCGCCC         TTTTTTTATACATCT  91 32
JC861_RS10040 2164143 .. 2164170 + -15.7  -5.50723   TCAGCCATAAGAAAA        GCCCCGTTTCA GAGCCA TGAAACGGGGC         TTTTTGTTTTCGTCA 100 48
JC861_RS10045 2164827 .. 2164838 +  -7.2  -3.28712   GCCGGCAATATCTGC                CGGC TCAG GCCG                 TTGTCAAACCCGCAG  64 48
JC861_RS10055 2166335 .. 2166353 +    -3  -5.13473   AGATGCGGCTCCAGG             GCGGACTT CAG AAGACGGC             TTTTTTCAATGTAAT  77 304
JC861_RS10115 2177899 .. 2177913 +  -6.4   -3.3482   TTCATCCGCCAGGTA               TCCGGA ATA TTCGGA               TTAATTAAACAATTA  56 347
JC861_RS10125 NONE
        metC 2181215 .. 2181232 +    -7  -5.36441   CTGTATACCGGAAAA             CCTGCA TTTTTT TGCAGG              TTTTTTCTGTCCGGA  89 64
JC861_RS10140 2183579 .. 2183602 + -18.2  -2.89921   TAAAATCTGACATTA          CCGTCACCGG AAAA CCGGTGACGG           TATATCCGGATTACT 100 38
JC861_RS20775 NONE
JC861_RS10170 2191311 .. 2191330 +  -5.6   -5.1287   AGAAAAACCCAGTAC            CCGGCGGT AAAA ATCGCAGG             TTTTTTCGATGTCAG  83 299
JC861_RS10185 2194029 .. 2194042 +  -8.1  -2.78463   ATGCCAGGCAAACGT               TGCCG GGCA CGGCA                TATCATAACGACCGT  57 204
JC861_RS10200 NONE
JC861_RS10205 NONE
JC861_RS10210 2200140 .. 2200153 +  -4.5  -3.06261   GGGCATAGCCCCGCT               TCGCG GCGT CGTGA                TATTGCCGGTTCAGC  48 57
JC861_RS10220 2201996 .. 2202012 +  -7.2  -3.44257   AATCCACTTCAACTC              CGGTCC AGGCC GGGCCG              TTATCAATATATTTT  61 428
JC861_RS10235 2204364 .. 2204404 +  -4.7  -2.71712   GGGTGCGTTTGATTA ACCGGC-GC-GGCAGATGGT GTGT GCCG-CTGCCTGCTGCCGGA CTTTCAGCCGCACCG  48 25
JC861_RS10245 NONE
JC861_RS10250 NONE
JC861_RS10255 NONE
JC861_RS10260 2208183 .. 2208225 +  -9.3  -3.91821   ATTTATCTGTTCTGA TGGTTTAACTGTCCGCACCGG AAA CCGGTGCGGACA-T-ACGTCA TTATTACTGTTTTTG  83 26
JC861_RS10280 2212162 .. 2212178 +  -8.7  -2.59039   CAAATCCGCTCTCTG              GCGTCAC TGC GTGATGC              ATTATGAAAATGATT  66 2
JC861_RS10285 NONE
JC861_RS10290 2213891 .. 2213920 + -15.1  -3.29704   CAGCCTGACGATTGC       TCCGCCGCTGT CGTTACAA ACAGCGGCGGA        TGTGTTTACTGCACA 100 33
JC861_RS10305 NONE
JC861_RS10310 2218196 .. 2218219 +  -6.6  -3.91908   ATCAGGCGTGCGCAG          CCTGATCCCG CCGG CGGTACCAGG           TATTTTTCACCATAT  69 21
JC861_RS10320 NONE
JC861_RS10325 NONE
JC861_RS10330 2220958 .. 2220996 +  -6.6  -3.24245   CGCCCCAGAGTACCG   TCCGCCATAACCAGCAGC CAG GATGCGGTTTGTGCCGGA   TTCAGTTGTGAATCA  57 124
JC861_RS10340 NONE
JC861_RS10345 NONE
JC861_RS10350 2223721 .. 2223757 +  -5.2  -2.93348   ATGTTCCGTCCGGCG   CAGC-CCGGAACTTAAG GCAG CTTAAGCTCCGCCGTTG    TCTGCTATTCATCCG  52 11
JC861_RS10355 2225769 .. 2225793 + -12.2  -5.48163   GCCATAATAGACGCA          GGCCGTTACG TTTTT TGTAACGGCC          TTTTTTGATTTATTT 100 45
        prpB NONE
        prpC NONE
JC861_RS10390 2234176 .. 2234195 + -12.2  -4.57514   CGCAGAAAAAACGAA            GCGGATAC TCCG GTATCCGC             TTTCTGTTTTATTCT 100 57
        ydfG 2235593 .. 2235620 +  -8.6  -2.57132   GCCGGTATCCGTATA        ATCAGGTAATTT TATT AAATTACCTGAA         ATTATCACCGAAAAA  63 59
JC861_RS10405 NONE
JC861_RS10410 2236379 .. 2236396 + -11.3  -4.78848   TTTGACCATGAAAAA             GGGCTGA TTTA TCAGCCC              TTTTGTATTTGACCG 100 57
JC861_RS10435 2241857 .. 2241887 + -13.4  -4.46835   ATTATTTTAAACTCT       TCAGCCACCTTTGT TAC ATAAAGGTGGCTGC       TTTATTTCACATTGT 100 243
         tus 2243833 .. 2243851 + -14.6  -3.26545   GAAGTGATGTAAAAA             CGGAGCCA TCA TGGCTCCG             TTCCTGCTATATACA 100 29
        manA 2246652 .. 2246677 +  -9.7  -3.72743   TTCTCTAATTTTCTC         CGGGCAGTCAG TTGG TTAACTGCCCG          TTAATTTTGATACTG  80 46
JC861_RS10455 2248372 .. 2248389 + -11.3  -4.95155   GTTGATCAGACAAAA             GCCAGTC GTCA GACTGGC              TTTTTATCATCTGAG 100 60
         add 2249444 .. 2249466 + -12.8  -5.86976   TTCCGTTACAAAAAA           GGCCTGATAT TTT ATGTCAGGCC           TTTTTTATTTTCTGA 100 47
        rsxA NONE
        rsxB 2254172 .. 2254184 +  -2.7  -3.30701   TTCAGATTGAGGCGT                CGTAA GTT TTATG                TTCAATTTGCTCAAC  46 21
        rsxC NONE
        rsxD NONE
        rsxG NONE
JC861_RS10505 2259214 .. 2259238 +  -6.4   -4.4767   TAACTGTATAATAAA          GCAGGCTCCT TTCCC GGGAGTTTGC          TTTTATCATCAATGA  74 38
         nth NONE
JC861_RS10515 2262109 .. 2262124 +    -6   -5.0538   CGTCTTTCAGCGAAC              CGCCGC AGCC GCAGCG               TTTTTTCAGATCGGC  86 188
        ribA 2266382 .. 2266401 +  -9.2  -4.92812   AGTAAAAACAGAAAA            GCGCGGCA AAAA TACCGCGC             TTTGTTTTCTTATCC 100 54
JC861_RS10570 2274197 .. 2274220 + -15.4  -3.96148   ATAATCTGCAAAGAA          TAACGGCAGC TTTC GCTGCCGTTA           TTTATACTGCGCCGG 100 74
JC861_RS10580 2276565 .. 2276596 +  -4.4  -3.03441   GAAACTGAATGTCGC      GCAGGCGGATATGA TTAT TGATATCCGCATCC       TGTTCCGGCCTGATC  48 340
JC861_RS10605 2282071 .. 2282081 +  -4.6  -3.41569   GTCAGAGGCCGTTAT                 CCGG TGA TCGG                 TATTTGCCTCGGTCA  55 259
       trpCF NONE
        trpB NONE
        trpA 2286873 .. 2286890 + -12.7  -4.81306   TAAGTTTTCACCCGG             CCCGCTG TTAA CAGCGGG              TTATTTTTTGTTGAG 100 38
JC861_RS10635 2287330 .. 2287351 + -13.1  -5.32882   TACCGGATATAAAAA           TGGCGCAAT TATT ATTGCGCCA            TTTTTTATGATGCTG 100 56
JC861_RS10645 NONE
JC861_RS10650 2290096 .. 2290117 + -10.2   -3.3705   CGGATTGGTAAAAAA           TCAGGCCA ATAATA TGGCCTGA            TTATCCGGTGTGTTT  78 14
JC861_RS10660 NONE
        qseC 2292801 .. 2292813 +  -6.9   -3.2794   TTCTATCGCTTTGAT                GCGGC CCT GCTGC                TTACTCTGAATCAGC  59 81
JC861_RS10675 2295261 .. 2295288 +  -5.6   -4.8622   ATAATAAAATCAACC        GGATATCGGT TTGTTTCC GCCGGTATCC         TTTTTCGTTAAACGG  78 37
        yciA 2295772 .. 2295793 + -15.9  -4.52589   TAACACCTTTCATGC           CGGCCACTC TTCT GAGTGGCCG            TTTTGTCTGCCGGGG 100 38
        dbpA 2297321 .. 2297340 +   -15  -4.17556   ACGGTTTTGTATCCG            GCCGGCCT TTTC AGGCCGGC             TTTATTCCACCTGTA 100 78
JC861_RS10690 2298190 .. 2298222 + -13.5  -5.26316   AATAAAGCTGAAACA      AAAACCCCGGCATTT TTC AGGTGCCGGGGTTTC      TTTTTTATCAGATCA 100 36
         cls NONE
JC861_RS10710 2301361 .. 2301391 +  -9.7  -4.36914   ACCGGAGTACGCAGT      CCGCTGGC-GGGAA TAAA TTCCCTGCCGGCCG       TTTTGTCAGCAGCGG  93 10
JC861_RS10755 2312068 .. 2312090 + -15.6  -4.37721   ATTTTCCGGTTATAA           CCCCGTCAGT ACA GCTGACGGGG           TTTGTGTGTTTTGTT 100 48
JC861_RS10760 NONE
JC861_RS10765 NONE
JC861_RS10770 NONE
JC861_RS10775 2315558 .. 2315574 + -15.1  -3.45023   GCTCAGATGTAAAAA              CGGGGCC ATT GGCCCCG              TTCTGATAATAATGA 100 29
        adhE 2319493 .. 2319508 + -10.4  -5.59879   AATAATAACCGCAAA              GCCCTC TCCG GAGGGC               TTTTTTATATTTATC 100 55
JC861_RS10795 2321348 .. 2321364 + -12.3  -5.71712   TACACCTGACAAAAA              GCCCTTC CCT GAAGGGC              TTTTTTTATATCCGC 100 46
JC861_RS10820 NONE
        purU NONE
JC861_RS10830 2327997 .. 2328009 +  -7.7  -4.17048   TTGCTTTGCTCATCA                TGCTG CTG CAGCA                TTATTTTCAGCAGCG  76 289
        xthA 2329847 .. 2329866 + -13.6  -3.55622   CCCGCTGATACAAAA            TGTCCCGC CAAT GCGGGACA             TTTCAGGCCGTTGAC 100 33
        sppA 2335691 .. 2335711 + -15.5  -6.28967   TCTTTACTCTCAAAA            GCCTGTTCG TGA CGAACAGGC            TTTTTTTTATTTCTG 100 48
        ansA NONE
        pncA 2337455 .. 2337476 + -11.6  -4.79352   TAGCGATCGTCATGA           CGGGACAG CAAGCA CTGTCCCG            TTTTATTCTCAGTCC 100 38
        gapA 2339626 .. 2339643 + -12.7  -5.86976   TCATGTTCTCTGAAA             TGGCCGC AATT GCGGCCA              TTTTTTATTTTGTAC 100 49
JC861_RS10890 2340553 .. 2340570 + -10.5  -5.20781   CCCGCAGATCCCCGG             GGGCCGC TTTT GCGGCTC              TTTTGTTTTGTGGTA 100 45
JC861_RS10895 2341560 .. 2341572 +  -6.3  -2.62184   ATAGTGCTGAACTTC                CATCA CAG TGATG                TGGTCTCCCGGAACC  54 64
JC861_RS10940 2349854 .. 2349904 +   -23  -3.14522   AGGCACTGGCCCGCT GACAATAAAAAACCGGCGCAGT TTTGTTC ACTGCGCCGGTTTTTTATTGTG TTCAGTCTGCGTTAC 100 24
        nhaB 2352440 .. 2352462 +   -15  -6.04953   TTTACATTGCACTAA           CCGGAATAAC CGT GTTATTCCGG           TTTTTTTATTTCTGT 100 48
        dsbB 2353122 .. 2353152 + -19.9  -2.93382   TCCTGACGCCGTCAA       GAACAGCCGCATC CGTGT GATGCGGCTGTTC       TGTATCAATCTACAA 100 41
JC861_RS10980 2357663 .. 2357683 + -12.6  -3.37091   ATTCTGAGAAAAGAG            TACGGCGG CAGCC CCGCCGTA            TTCCGTTTTCACAGT  95 49
JC861_RS10995 2360053 .. 2360065 +  -3.3  -4.48902   TAATAATATTCAGCA                CCGCT GAT ACCGG                TTTATTTCAGTGTAT  63 38
JC861_RS11010 2362622 .. 2362632 +  -4.6   -4.3739   CTTTTCAATCACAGT                 CCGG ATA TCGG                 TTTTATACAGCCATG  66 436
JC861_RS11015 NONE
JC861_RS11020 2363942 .. 2363972 +  -6.7  -2.56601   CAACAGCCCGTCACC       GTCATCCCGGATC ATTCC GTTCCGGGCTGTC       ATCCTTTTTAATCCA  55 57
        ttcA 2365205 .. 2365226 +  -5.9  -3.05844   TACAATTATGGAGCA           CAACGTTCA TCGC TCAACGTTG            TATTCACCTGCGGGA  54 206
         tpx 2368710 .. 2368741 + -15.8   -5.7946   ACCCGTATCTGTAAA      AAACCCCGCTGCCG GTGA CGGCCGCGGGGTTA       TTTTTTTATTGCGGG 100 44
        pspF 2375818 .. 2375837 +  -4.8  -3.17456   TTACTGAAAAAGCAT            GCCGGCAG CCCG CAGCCGGA             TTAAATGCTTTCGTT  51 2
        sapA NONE
        sapB NONE
        sapC NONE
        sapD NONE
        sapF NONE
        fabI 2382175 .. 2382197 + -14.2  -3.80133   CTGAAATAAAGCAAT           CAGCCTCTGT ATA GCAGAGGCTG           TGTTTTCTGCACGTC 100 32
        gstA 2384114 .. 2384140 + -13.8  -3.99324   TGATATACAGAGACA         AAAAACGCCGGA TAA TCCGGCGTTTTC         TTTATGCTGATACGG 100 47
JC861_RS11145 2389187 .. 2389206 + -12.2   -5.4833   GGTTTACCGGTAAAA            GGCGAAAC ACCC GTTTCGCC             TTTTTTATTACCTGA 100 48
        gloA 2391049 .. 2391065 +  -8.7  -5.20222   CTCCTTCCGGCAAGC              CGCGCTA GAA TAGTGCG              TTTTGTTTGTTTAAT 100 103
         rnt 2391736 .. 2391774 + -18.4  -2.60079   GCAGACAGTAATCAG   TAAGAAAACGCCACCTCA GAA TGAGGTGGCGTTTTTATA   TCAGTTATCCGGTAA 100 23
        rhtB 2393983 .. 2394004 +   -13  -3.72742   GCCTGAGCAGAAATA           CGTCCCGC CGGTTT GCGGGACG            TTATATTACTACTCA 100 35
JC861_RS11190 2395724 .. 2395738 +  -4.2  -5.92399   ACTCAGCTGTTTATC               GCGC TCAAGCT GCGC               TTTTTTATTTTCTTC 100 434
        sodB 2397311 .. 2397328 + -12.7  -4.53163   CAGTCGATCAAAAAA             GGGCGGA ATTT TCCGCCC              TTTTGTACTGTATGG 100 98
        purR 2398850 .. 2398861 +  -3.6  -3.69482   GCAGCACGGGCTGTC                CGGC AGCG GCTG                 TTCTATCTTCAGTGC  53 140
JC861_RS11225 2401009 .. 2401028 + -13.6  -5.09426   ATATTCCTAATTAAA            GGCCGTAC TCAT GTACGGCC             TTTTTTGCCATTGAA 100 60
         cfa 2402439 .. 2402465 + -10.3  -5.72616   ATCCGTAATAAAAAA        TCCGGT-CTGAT AATT ATCAGCACCGGA         TTTTTTTATCTGAAT 100 61
JC861_RS11240 2404725 .. 2404740 +  -4.6  -4.07568   TTTATCCTGCAACGT              GCCGGT CGTT AACGGC               TTTTGACGGGGGAAA  61 14
JC861_RS11245 NONE
JC861_RS11250 2405166 .. 2405185 +    -5  -3.46146   ATCAATACGGCTGAT            TTCTTGCG TTAA CGCAAAAA             TGTTAATTTATTTCT  55 127
        pykF 2406894 .. 2406912 + -11.7  -5.88565   TCTGAATTAATAAGA             GCACCCG CTGCA CGGGTGC             TTTTTTTATTCTAAA 100 56
JC861_RS11260 2407451 .. 2407477 + -18.2    -5.252   TGCCTGAAGAACAGA         TGGCGTAGCATA AAT TATGCTACGCCA         TTTTTTATGCCAGTC 100 52
        ydiK 2419583 .. 2419615 + -11.6  -4.04141   AAAAGAATAAGTTTT     TA-ATCAAAGGTGCA GAAA TGCACCTTTGATATA      TTTAATTAATTATTC 100 31
JC861_RS11320 2423529 .. 2423554 +  -7.6   -3.9279   GGCGGAAACGGTTAA         GTGGATCATC TCTCCC GGTGATCCGC          TTTCTGCAATTGCAT  74 43
JC861_RS11325 2424724 .. 2424753 + -16.7  -3.16683   CCGCTTCCTTTATTG       TAAAACAGGATGC TCCC GCATCCTGTTTTA        TTCATCACCTGAAGT 100 42
JC861_RS11330 NONE
JC861_RS11335 NONE
JC861_RS11340 2427075 .. 2427085 +  -2.4  -3.19212   TTACGTAAAGCGATG                 GAGG CAG CCGC                 TGTATTATGAGTAAT  43 5
JC861_RS11345 NONE
JC861_RS11350 2428893 .. 2428932 + -16.8  -3.14132   GCGCCTTAATGCTCT  TCGCTTTTTGCCGTAATAC GTT GT-TTACGGCAAAAAGTGA  TTGCTGAAAGCAGAC 100 32
JC861_RS11360 2430132 .. 2430165 + -13.2  -5.96894   TAAGAATCTGAAAAG     TATCCCCGTCTGCC ACAAAC GCCGGACGGGGATA      TTTTTTTATTTAAGT 100 38
JC861_RS11470 NONE
JC861_RS11475 NONE
JC861_RS11480 2456373 .. 2456391 +  -3.1  -2.50345   ATCAGCAAAACTGCG             TCAGGAG GCAAA CTCATGA             GTGATTTTCTGACCT  42 7
JC861_RS11485 2457345 .. 2457355 +    -4  -4.05747   TGTATTTCCCTGCGG                 TTAC TGT GTAA                 TTTGTGTGAGATGTC  59 128
JC861_RS11490 2458323 .. 2458348 +  -9.8  -5.05782   TTCCGGATAAAAAAA         TACCCCGTCAG CAATC CTG-CGGGGTA         TTTTTTCAGATAACT 100 48
        hxpB 2459776 .. 2459786 +  -3.2   -4.4648   TTGCTGATAACGTTT                 TGCT GAT GGCA                 TTTTCTGATAACCGT  63 48
JC861_RS11505 NONE
JC861_RS11510 2462181 .. 2462207 + -11.7  -5.72616   TCAGATAACAGAAAA         TCCCGTATTCA GCCAA TGAATGCGGGA         TTTTTTTATGTACAT 100 61
JC861_RS11530 2467334 .. 2467372 +  -7.4    -4.258   ACCGGCTGCCCCGCT   GAGAGTGATCCCCGGG ATAGCTG TCCGGGGGTTATTCGC   TTTCTTCGTCGATAC  75 24
JC861_RS11540 NONE
        dapE 2469593 .. 2469603 +  -6.8  -2.81966   TCAACGGATTATGGA                 GCAG ATC CTGC                 TATGATGACGTTTGA  57 10
JC861_RS11550 2470300 .. 2470325 + -10.3  -4.74013   CGGGGATTTATCCTC         CGGCGCCGGGG GATT CTCCGGCGTCA          TTTTCTCTGTTTCCG 100 43
JC861_RS11605 2482369 .. 2482389 +   -14  -4.10566   TTCTGCCGCTGTCTG            CTGCGCCC ATTGC GGGCGCAG            TTTCTGTAATACTGT 100 42
JC861_RS11640 2489365 .. 2489379 +  -2.8  -3.03338   CATCATATAATGATT               CGGATT ATA AATGCG               TATTACAAAGGTTGT  43 42
JC861_RS11645 2490559 .. 2490594 +    -9  -5.00196   TCCGGATGTAGCGGA    TGTAAAAACACCGGTC ATCA GACCGGTGTTGCTTCA     TTTTCTTCTTTCAGA 100 30
        gcvR 2494688 .. 2494700 +  -2.7  -3.43234   AAGGCACTATTACCC                TGATG AAT CATTA                ATTTTGTGTTGATTA  48 12
         bcp 2495241 .. 2495258 +  -3.4  -6.20267   GTTTTTTCTGAGAAA             CACCAT TTTACC GTGGTG              TTTTTTTATTTTTCA  95 58
JC861_RS11675 2496831 .. 2496860 + -20.1  -2.57013   TGTAACACCAAAAAA       CCCCGATAGCCGG TTGT CCGGTTATCGGGG        TCACTTCACTTCAGA 100 36
JC861_RS11685 NONE
        arsC 2499980 .. 2500000 +  -9.7  -3.52113   GAGCCTGACTTTCCG            TCCCCGG TAACCGC CCGGGGA            TATTTCTCCGCCCGT  78 39
JC861_RS11695 2500683 .. 2500706 +   -11  -4.30995   ACGCTGATCCCTGCC          ATACCGCCGT ATTA ACGGCGGTAA           TTCTTTTATCCGAAA 100 34
JC861_RS11700 NONE
JC861_RS11705 2503287 .. 2503306 +  -9.3  -3.95435   CATACTACAGATAAA            GATGCGC CCTGCC GCGCATC             TTCTGTTTTACAGGG  83 48
JC861_RS11710 NONE
JC861_RS11715 2505160 .. 2505191 +  -8.8  -3.03159   GTGTACGCATCTGGC      GGTCGAGGCGTTTTA AGA TAAAGCGCC-CGACA      TCTTCCGGCAGTTCA  62 136
        purM NONE
        purN 2509912 .. 2509941 + -10.8  -4.15864   TTTCCATTCATAAAA       TAAATGCCCCGC TGACAT GCGGGCCATTTA        TTTATACTTATTCTC  93 28
JC861_RS11745 NONE
JC861_RS11750 2512328 .. 2512339 +  -5.8  -4.33674   GGAAAAGCCGATCCC                CGGA TAAT TCCG                 TTTCTGTTATGTGTT  70 468
        speG NONE
        ppk1 NONE
         ppx NONE
        mgtE 2518210 .. 2518251 + -21.1  -5.14985   TCAGATAACCGGCTG CGGCCACGGAAAG-AGAAGT GTT ACTTCTGCTCTCCGTGGCCG TTTTTATCTCTTTCC 100 48
JC861_RS11780 2520229 .. 2520248 + -13.6   -5.4433   CCGGTAAAACAGCAA            GGGCGGAT CATT ATCCGCCC             TTTTTCTTTCTGTCT 100 46
JC861_RS11790 2521415 .. 2521442 +    -7  -2.51223   ATTTTAAGTATGTCA        GTCAGGGCAG TGCAATAT CTGCCCTGAA         ATCTCTGTTATTCCC  55 34
JC861_RS11800 NONE
JC861_RS11805 2526444 .. 2526458 +   -10  -3.07029   AGCGACAATACAGGA               GCCTCA TCA TGAGGC               TGTTCGCCCTGTTTA  73 14
        mdtC NONE
        baeS NONE
        baeR 2531657 .. 2531687 + -13.4  -4.99861   GTTATCTGACAGGGA       TAAAAAACGGCGGA ATA TCCGCCGTTTATTG       TTTTTCTGATTACTG 100 46
        yegQ 2534195 .. 2534222 + -14.3  -5.35224   AGGAACCACCTCCTT        GGTTGGCTCAA TCTCCC TTGAGCCAACC         TTTTCTTTTTGTGCC 100 142
        yegS NONE
        fbaB 2536467 .. 2536481 + -11.4  -4.41241   TTTGCCCGTTGTCCG               CGGAGC CGG GCTCCG               TTTTATCAGCGTTTC 100 160
        pagP 2539745 .. 2539801 + -32.9  -2.92144   CGCTGGCAGTTTTAA GTCTTTCAGACAATAAAAAACCGGGGA TTT TCCCCGGTTTTTTATTGTCTGAAAGAA TGATTATGCTTTCGC 100 26
JC861_RS11875 2542184 .. 2542201 +  -4.8  -3.53012   CTGCCGCAGTACAAT             CAGTGG TGCATT CCGCTG              TTTCAGGAGCCAGCA  55 128
        yidA NONE
        brnQ 2544511 .. 2544530 + -11.4  -6.00814   CGCATGATGTAAAAA            GCCCGGTT CGCT GACCGGGC             TTTTTTTTCGTTATT 100 34
JC861_RS11900 2546986 .. 2547003 + -11.3  -3.29581   ACGCACGATAAAAAA             TACCCGC CGCG GCGGGTA              TTCAATTATGTATTT  86 30
JC861_RS11915 2550615 .. 2550627 +  -4.1  -3.81557   AGAGAACTGCCGTAC                TGCTG CCA CAGTA                TATTTATTTCAGGCG  56 108
        satP 2552590 .. 2552606 + -12.3  -5.60689   TCTTATATAAAAAAA              CCCGTTC AGT GAACGGG              TTTTTTGTTGTCTGC 100 49
JC861_RS11940 2554933 .. 2554957 + -15.7  -5.71712   GATAACATGACAAAA          CCGCTGCCGTC AGT GACCGCAGCGG          TTTTTTTATATGAAC 100 47
JC861_RS20790 NONE
JC861_RS20795 NONE
JC861_RS11980 2564496 .. 2564515 + -12.8  -4.96848   TATGGCATAAAAAAA            CCGGGCTG ACTG CGGCCCGG             TTTTTCTGTCAGAAC 100 31
JC861_RS12055 2583015 .. 2583034 + -13.6  -5.30616   CGTTTCTGCTGTCAG            CGGCTTCC CCCG GGAAGCCG             TTTTTATTTACATCC 100 42
        yfbR NONE
JC861_RS12065 2584521 .. 2584533 +  -4.7  -3.71873   CTCGGCCAGTGAATT                GAGCG GTA CGCAC                TTTCCATATCGATAC  58 450
JC861_RS12090 2589471 .. 2589492 + -17.3  -4.64861   GCATAATCTTTGCTC           TCCGCCGGC CATT GCCGGCGGA            TTTATTTTGAACACC 100 35
         pta 2591713 .. 2591737 + -17.1  -5.58454   AGCCACAGACAATAA          TCCCGGCCGGG TTT CCCCGCCGGGA          TTTTTTTACTGTACA 100 57
JC861_RS12110 2596075 .. 2596089 +  -8.6  -3.15544   GCGGGATTTACTGGA               TAGTCC GGC GGACTA               TTAATGCAGATCCCG  67 7
JC861_RS12170 2608075 .. 2608086 +  -4.4   -5.1471   ATCTTTTTGCTCTTA                TCCA TATT TGGA                 TTTCTTTTTTATCCT  78 411
        mnmC 2612352 .. 2612382 +  -4.7  -3.14284   ATTATTGATAATTTT       TCCGGCGGTAA CGCAAACTA TCATCGCCGGA       CTTTATTGATCACGG  51 78
        glsA 2613932 .. 2613950 +    -6  -4.78752   CTTGGTGTAAATAGT             CACAGC CTGTTGT GCTGTG             TTTTTCGGTTGTAAT  81 346
        smrB 2619496 .. 2619520 +  -6.4  -2.68806   CAATCTGTCCGGGAC          CGCGGTGC CAGAGCAGT GTACCGCG          TCCGTTATTATCCAG  54 46
        fadL 2625841 .. 2625861 + -14.1  -6.18768   GCATACATAAAAAAA            GTTCTGGTC AGT GACCAGAAC            TTTTTTTTATCTTTT 100 53
        proC 2627653 .. 2627683 + -11.8  -3.08371   AATAATCACCGGATA       CCGGAACCGGCATT TAT AGCACCGGTTCCGG       TCTGTTCAGACTATC  86 36
        dsdC 2631759 .. 2631771 +  -5.5  -3.25652   TCCGGCTATACAGCC                GGGCA TCA TGTCC                TCTTAGTTAAATGGA  55 214
JC861_RS12285 2632051 .. 2632067 +  -4.3  -4.75288   AATCATACCGATTAT              CAGCTGG TAG CGGGCTG              TTTCTTTTCATCTCA  71 234
JC861_RS12290 2632903 .. 2632915 +  -6.3  -3.56972   GCCTGCTTATCGTGA                TTGCA GCC TGCAA                TTGATTTCATGGCAT  60 190
JC861_RS12325 2635845 .. 2635855 +    -4  -5.19251   ATCAAGCCTGAATAA                 TACT AAT AGTA                 TTTTTATTAGTATTG  78 117
JC861_RS12330 2636253 .. 2636269 +    -5   -3.9398   ACAGTGACAGATAAA              CGCCGG GGCCA CCAGCG              TTTATCACATTATCC  61 48
        nlpA 2637791 .. 2637815 + -15.7  -3.93963   TGACAGCAAACTTAA          GCGTGCCGGAC ACC GTCCGGCACGA          TTTCTCACTCCTGAT 100 41
JC861_RS12355 NONE
JC861_RS12360 2640724 .. 2640745 +  -3.1  -3.31625   AAAACTGAATGCGGA           CAAATAATA AATT TATTTTTTG            TTGATGATTCGTTTA  47 19
JC861_RS12365 2641246 .. 2641274 + -14.7  -2.97602   CCATACCGGGCCGTA        AAAAACCTCCCGT CAT ACGGGAGGTTTTC        CTTTCGTCTTAATTA 100 77
JC861_RS12445 NONE
JC861_RS12450 2655672 .. 2655689 +  -2.1  -3.93988   ACCATATGTTAATAC             TGAAATA ATAT TATTTTA              ATTTTTTTGATGTGC  53 98
JC861_RS12455 2656157 .. 2656186 + -13.1   -3.6216   CTGCGCGGACAAAAA       TTATAACC-CCCGT GAA ACGGGCGGTTATAA       TTCTGCTTATTGATC 100 107
JC861_RS12475 2659044 .. 2659055 +  -5.8  -2.70932   CTTTTCTGTTAATTA                TCCG CCGC CGGA                 TAATTGACAGGAAAA  52 119
JC861_RS12480 2659590 .. 2659615 +  -9.9  -3.87373   GGCTGATAACACAAA         GCAGGA-AAAAC CAC GTTTTATCCTGC         TTTGTCAGCAATCTC  84 213
JC861_RS12500 NONE
JC861_RS12505 2664690 .. 2664709 + -12.2  -3.62723   CTGAACAATAAAAAA            CGGGAACT AATA AGTTCCCG             TTAATTATTTCACTG  93 286
JC861_RS12530 2669424 .. 2669444 +    -4  -3.34398   TCCTGATAAAAGATG           CGCTCACCT TCCG GGGTGA-CG            TCTTTCAGCCGCCAG  49 202
JC861_RS12680 2693204 .. 2693220 +  -4.3  -2.89602   GCATGAAGGGTTATT              TCGCTGA CAC TCTGCGG              CTTTCCTCTGAAAAA  47 400
JC861_RS12690 2695164 .. 2695174 +  -3.2  -3.08471   ACTACCCCCACTAAC                 GGGT GTA ATCC                 TTAAATGCCATTGTG  46 401
JC861_RS12745 2702036 .. 2702068 +  -4.4  -3.01001   GAATATAACACCGGA     TC-ATATAACTGTAT AAAT ATACAGCTATATAGA      TATACTTTAAACATC  47 130
JC861_RS12750 2702478 .. 2702493 +  -6.8  -2.92091   CTTTAACAGTACAAC              CGCAGT AACG GCTGCG               TATCTGAATAACTGT  58 18
JC861_RS20820 2703102 .. 2703122 +  -2.5  -3.60094   AACTTGGCGCTATCT            TTATCGCCG CTA CGGGAATAA            TTATCATTATATATG  50 190
JC861_RS12760 NONE
JC861_RS12765 NONE
JC861_RS12770 2705610 .. 2705626 +  -7.9  -2.92792   GGAACATAAGCCAAT              CCCAGGC CCA GCCTGGC              TGCTTTGGCCTCCAT  58 303
JC861_RS12780 2707649 .. 2707669 + -10.4  -4.30844   GATAACGACCTGAAA            CTGCCTGC TGATT GCAGGCGG            TTTTAATCGTCCGCT 100 36
JC861_RS12785 2709180 .. 2709199 + -12.2  -3.62723   CTGAACAGTAAAAAA            CGGGAACT AATA AGTTCCCG             TTAATTATTTCACTG  93 232
        rluE NONE
JC861_RS12800 2711833 .. 2711861 +  -3.7  -3.46885   ACCTGAGTGATGCGC        CGCTGTACGTATC ATG GTAAAGTACGGCG        CTTGTTTTTTTCCCC  51 138
        mnmA NONE
        hflD NONE
        purB 2715087 .. 2715107 + -11.2  -5.71983   ATAATCAATAACACG            GAGGCAGA GAATA TCTGCCTC            TTTTTTTATGATTAA 100 55
        phoP 2715915 .. 2715929 +  -2.1  -3.04144   AAGTAACAGACGCCA               CTTCA ACCAC TGAGG               TATTGCGCATGACCA  42 35
        phoQ NONE
JC861_RS12830 2718677 .. 2718698 + -12.3  -6.07627   CCGTTCAGATAAAAA           TGCCACGTG ATAT CACGTGGCG            TTTTTTTTTACAGAT 100 62
         mfd 2732820 .. 2732833 +  -3.7  -3.53012   CAACATCCGCACTAT               CAGGC AGGT GCCGG                TTTCGGCCGGCACCA  51 45
JC861_RS12885 2734153 .. 2734177 + -11.6  -4.96276   AATAAAATTGACTGA          TACCGGTTTA CTGAA TAAACCGGTA          TTTTCCTTTTTTTGT 100 56
JC861_RS12990 NONE
JC861_RS12995 2752004 .. 2752020 + -10.8  -4.06419   CAATATAAGAAAAAA              CCCGCG TTCGT CGCGGG              TTCTTTATAACGGGG  90 64
         rne 2756716 .. 2756735 + -12.2  -5.99154   TCGCTGAACTGAAAA            TGGCTTCC TCCG GGAAGCCA             TTTTTTTATTTGCTC 100 48
        sbcB 2759139 .. 2759149 +  -6.8  -4.80396   TGACCTGAACCGCTT                 TGCC GAA GGCA                 TTTTTGAGTCTTTTA  85 331
JC861_RS13070 2773472 .. 2773484 +  -4.7  -4.56367   ATCCCGCTGATCACC                GGCTG ATC CTGCC                TTTCTTTCTGCGATA  68 20
         nfo 2774825 .. 2774837 +  -9.1  -3.53012   GGTTGGGTTTCACCA                GCCAC GGC GTGGC                TTTCAGGCCGGCCAC  71 424
JC861_RS13085 2776042 .. 2776067 + -12.5  -2.78696   AAATAATCTGTTATC         TGCCGTACCGG ATAT CCGGCGCGGCA          ATTGCTTATTTATCA  89 35
         mtr 2777451 .. 2777483 + -15.7  -3.13906   GATTTAATCCTGACA     GCACACCCGCCGCA TTTCTC TGCG-CGGGTGTGC      TAATTTTGGCTTGCA 100 39
        yeiP 2778191 .. 2778202 +  -7.2  -4.50976   AAAAACTGCCTGTTA                CCGG GTTA CCGG                 TTTTCTGCTCTCAGC  78 55
JC861_RS13110 2780380 .. 2780395 +  -2.5  -4.62069   TTCATTGATATTAAA              CGTGC CGTTCC GTACG               TTTTTAGAATAAACA  64 230
        mepS 2781098 .. 2781115 +  -9.9  -5.76633   ATTTAAAAAGAAAAA             GCTTCCT TTTC AGGAAGC              TTTTTTTATATCTGC 100 66
JC861_RS13135 2786051 .. 2786080 +  -4.9  -5.94597   CGGAGCCAAATACCG       ACTTTGCTGCTGG GTCG CCTGTAGCAGAGA        TTTTTTTTACTCTTG 100 138
        rplY 2786429 .. 2786458 + -18.1  -4.02334   AATCGGGACGCCGAG       TAAATAACGCCGC TTTT GCGGCGTTATTTA        TTTCTGCTCTAACTA 100 62
JC861_RS13150 NONE
        yejM 2789758 .. 2789769 +  -4.4  -3.56704   AAAAAAGCACAACCG                GACA GCTC TGTC                 TTGCTTTAATCAAAG  52 51
JC861_RS13160 2789902 .. 2789919 +    -7  -5.96219   CTTTATATAAGAAAA             CCAACC GCTTAG GGTTGG              TTTTTTTTGTGCCTG 100 43
JC861_RS13165 2790795 .. 2790815 +    -4  -2.82602   TCATGTGCTTAATGT            CTCTGTAA ATGAG TTACTGAG            TGATTACCTTTCCTC  46 299
JC861_RS13180 NONE
JC861_RS13185 2792953 .. 2792968 +  -6.8  -4.37067   CAGATAATCCAGCCA              GGCGTT TAAC AGCGCC               TTTTCATCATCTTTG  75 81
JC861_RS20830 2803304 .. 2803317 +  -3.8  -2.91735   ACATCAGGCAGAGTT               TCGC ATTAAA GCGA                TGTGTCGCGTGTTGA  46 60
JC861_RS13245 2804622 .. 2804652 +  -2.4  -4.56597   CCGCTTTTAATCTCT       TCGGCCTGCTCT ACCCACC AGTGCAGGCGGC       TTTTTGACAGGAGCC  60 516
JC861_RS13330 2816638 .. 2816652 +  -2.8  -3.66018   CTGGCTTGCCTTCCC               GATAGA TAA TCTTTC               TTGTTGCAGTGCTCA  51 231
JC861_RS13460 2830573 .. 2830586 +  -8.1  -5.46629   CATAAACACACAAAA               CCAGC CCAT GCTGG                TTTTTTTACGCTCTT 100 36
JC861_RS13465 2830882 .. 2830897 +  -6.8  -2.92091   CTTTAACAGTACAAC              CGCAGT AACG GCTGCG               TATCTGAATAACTGT  58 18
JC861_RS13470 2831451 .. 2831478 +  -2.9  -2.63476   ACGGCAGTATCGACG        GGAAATTAA AAGCCATTAA TTAATTTCC         AATTTTTAAATAAAT  41 3
JC861_RS13475 2832375 .. 2832394 +  -7.1   -5.0916   AGCATAATTATTTTA            TGCCGCT TTAACC GGCGGCA             TTTTTATATTCCAAC  90 34
JC861_RS13480 NONE
JC861_RS13485 NONE
JC861_RS13490 NONE
JC861_RS13495 2834756 .. 2834770 +  -2.1  -3.65522   GGAATGAAACGCAGA               TCTGG GCGAG TCAGA               TTCTTGAGCTGACTG  49 385
JC861_RS13505 NONE
JC861_RS20845 NONE
JC861_RS13510 2836809 .. 2836826 +  -7.7  -5.65177   ATTTATATAAGAAAA             CCAACCG CTTA TGGTTGG              TTTTTTTGTACCTGT 100 224
JC861_RS13515 2837820 .. 2837838 + -11.7  -5.58454   TGCATTAATTTATTT             GCCCGGT TGATT ACCGGGC             TTTTTTTCCTCTGAC 100 217
JC861_RS13530 2839975 .. 2839991 +    -3  -4.99645   CTGACAATATTTTCC             TGTCAGG ATTC CCTG-CA              TTTTATTTATCGCCT  74 135
JC861_RS13545 NONE
JC861_RS13550 2842416 .. 2842431 +  -3.4  -4.58395   ATAAAACACTCCCAA              TAAATA TTAT TATTTA               TTTTTAAAAAATCCC  65 37
JC861_RS13555 NONE
JC861_RS13560 NONE
JC861_RS13565 NONE
JC861_RS13570 NONE
JC861_RS13575 2845013 .. 2845030 +  -2.6  -4.36554   CTTTTTCTTCATCCA             GTGCCG GATTGG CGGCAA              TTTGTTCTGCTGATG  60 110
        rcnR 2847627 .. 2847645 +    -3  -5.08601   ATCCCTGTATATCTC             AGAGACTC ACT GAGTCCCC             TTTTTATTCACCTCC  75 122
JC861_RS13600 2848183 .. 2848202 +  -3.4  -2.82482   TACTGCCGTGATCGG            AAGGCGCT GTAC AGCGCCGG             ATTTGCATGATATTG  43 30
        ydeE 2849504 .. 2849516 +  -4.1  -3.38522   GATACGGTAATTTTC                TGGCA CTG TGCTA                TCTTTCACCTGAATG  51 84
JC861_RS13610 2850599 .. 2850628 +   -10  -2.57211   TCTGATCTTTGATCC       GGCACAGTGCGT CCCGGT GCGTGCTGTGCC        ATTGTGAAAGGCCAT  71 36
JC861_RS13615 NONE
JC861_RS13620 2853088 .. 2853114 +    -2  -4.78477   GCCCGTTATCAGCCG         CCCCGGTTCCGC AAA GAAGCACCGGTG         TTATTTTTTATCTGT  66 176
JC861_RS20850 2864915 .. 2864940 + -11.2  -2.72511   GTACAGTAAGCTGCC         GCCCCTGC-CT GTCTG AGTGCAGGGGC         ATTTCCGGCAGTACA  76 32
JC861_RS13710 2873051 .. 2873077 + -18.2  -4.27519   AAGTAATTCAAACCA         GCAATGAAGGGT TAT ACCCTTCATTGC         TTTATATTATCAGCT 100 35
        fabG 2883070 .. 2883091 + -13.1  -3.35934   AAAAACCATGCAGGT           GAGGATACC GCCC GGTATCCTC            TTATCCGATCTGTGC 100 55
JC861_RS13795 NONE
JC861_RS13800 2888455 .. 2888476 +  -2.1  -3.14931   CAAAGGTGCTCATCA           GTGTGCCCG TCAC CGGAAGCAC            TTCCTGCCAGGTACG  43 236
JC861_RS13815 2889785 .. 2889814 + -15.1  -3.48395   TCAGAAAAACTGAGT       GATTCCGGTGGTG CGCT CACCACCGGAATA        TTATATCAGCAGAAT 100 28
        gltX 2893516 .. 2893535 + -13.6   -5.1675   TTATCTGCTGCTCAA            TACCCGGC CTGT GCCGGGTA             TTTTTTCATCGGTCG 100 44
JC861_RS13860 2893726 .. 2893736 +  -2.4  -4.09243   GTGACTGATAATATC                 GCGG CAC CCGG                 TTTTCCGGGGCTATA  55 49
JC861_RS13865 2893827 .. 2893845 +   -16   -5.7827   TCCACCAAATTCAAA             CCCCGGTC TCT GACCGGGG             TTTTTTGTTTCTGTT 100 34
JC861_RS13875 2895404 .. 2895423 + -12.2  -4.83593   CTGATGTGACTGAAA            CGGTCTTC CGCG GAAGACCG             TTTTTCATCATTGTT 100 264
        cysZ 2899532 .. 2899562 +    -9   -4.6644   TCTGCCATCCCTTTC      CGTGCAGGGCGGT TATCGC GCCGCTCTGC-CG       TTTTTCCCGTCTCTT 100 41
        cysK 2900706 .. 2900722 +  -9.4  -5.60993   TGCCTGACCTCGAAA              GCACCC GTAAA GGGTGC              TTTTTTTGTGCAACG 100 68
        ptsH 2901224 .. 2901250 +  -8.8  -2.80821   CCTCACCTGTCAGGA        TCCCCGGCTAT TGCTGC AT-GCCGGGGA         TAGTCTGTTTCCGGG  67 52
        ptsI NONE
         crr 2903637 .. 2903654 +  -7.7  -5.79526   CTGTACACTGAAAAA             CGGTTTC TGCG GAAGCCG              TTTTTTTTCGCCTGT 100 59
JC861_RS13920 2904249 .. 2904281 + -11.4  -2.53625   CTAGTCACCACATCA      CACAATTAAGCCCC GTTAA GGGGTTTATTTGTG      AATTTTGATCGTTTT  79 37
        uspF 2904823 .. 2904848 + -11.9  -5.95539   ACGGCAGTGCCTGAC         TGAACGCCCGT TTTA ACGGGCGTTTG          TTTTTTTATTTCCCG 100 44
JC861_RS13950 2909186 .. 2909209 + -15.4  -3.75332   GGGCAGATAAAAAAA          GCGGGGTATA AAAA TATACCCCGC           TTTGACTTAGCAGAT 100 31
JC861_RS13980 2914555 .. 2914573 +  -3.8  -4.18018   CGATGACCACCCCGC             CGGATACA CAC TGAATCTG             TTTTCACTGACAGGA  60 12
JC861_RS13985 2915762 .. 2915782 + -11.1  -3.15999   GCCTGACACTCAAAA            GCCCCGC AATTTCA GCGGGGC            TTCGGTATATAGCCC  79 35
JC861_RS14000 2917646 .. 2917656 +  -4.6  -3.53343   ATTCGCCCACCTTCC                 GGGG TGA CCTC                 TTTCAGCCGCCAGTT  53 197
JC861_RS14070 2930127 .. 2930159 +  -7.7  -2.60032   CAAACTGAAAATAGC      GAAGCCCCGACTA CTTGCGA TAGCCAGGGCTTC      AATTTTTGCCAGAAA  60 33
JC861_RS14075 2931016 .. 2931029 +  -8.1  -3.58932   AACTAAATAACCAAA               GGCCA AGGA TGGCC                TTACTTATTCATTAT  70 35
JC861_RS14185 2946123 .. 2946138 +    -9   -5.4833   CAGAAATAACATCAA              GGCTAC TTCG GTAGCC               TTTTTTATTGCCTAA 100 42
JC861_RS14255 2954977 .. 2954993 +  -3.7  -3.11208   CCACCGCATATGAAG              TTTTTGC TGA GCAAGGA              TGATTTTCCCTAAAC  48 6
JC861_RS14260 NONE
JC861_RS14265 2955822 .. 2955837 + -10.4  -5.29782   GAAAAATAACCCCCA              GCCCTC CCGC GAGGGC               TTTTTTGTGCCTATC 100 252
JC861_RS14280 NONE
JC861_RS14285 NONE
JC861_RS14290 NONE
JC861_RS14295 NONE
JC861_RS14300 NONE
JC861_RS14305 NONE
JC861_RS14310 NONE
JC861_RS14315 NONE
JC861_RS14320 2962787 .. 2962802 +    -4  -4.03995   GTTTAGTCACTGATG              CGG-GTA CAA TACGCCG              TCTTTTTATAAGGGG  59 73
JC861_RS14325 2963407 .. 2963422 + -10.4  -4.87665   TTTTCCATTCGATAG              CCCTGC ACTA GCAGGG               TTTTTATACCTAAAA 100 26
JC861_RS14330 2963909 .. 2963934 +  -2.5  -3.83026   AAGCCCTGATACGCT         TACGTCATGGTG CCG CGCCG-GACGCA         TTTCGTATCAGCGGA  52 301
JC861_RS14335 2965608 .. 2965621 +  -2.5  -4.81212   AAAATCTATTTTAAT               TTATT TTTA AATAA                TTTTATTCTGATAAA  67 402
JC861_RS14345 2968005 .. 2968027 + -12.8  -5.08178   TTATCTGATGACAGC           GGCCTCATTA TTT TAATGGGGCC           TTTTTGTCTCTGTAT 100 41
JC861_RS14350 2969404 .. 2969431 + -13.5  -2.57881   ATAAAAGGTGACAGA        CGGCCGGATGCA GATAA TGC-TCCGGCCG        CTTGTGCAGCGGTTC  93 37
JC861_RS14355 2971039 .. 2971050 +  -2.2   -3.9122   CCCGTTATCATGAAC                CTGA CATT TCGG                 TTGTTTCAGAAAATC  53 187
        deoD 2973222 .. 2973236 +  -8.5  -3.86346   ACCGGAAAAGAAAAA               GCGCC TTTAC GGCGC               TTTATCCGGGGATGA  75 59
JC861_RS14375 2974598 .. 2974617 + -13.6  -5.24799   CCGCAGAAACAAAAA            CACCGCGT ACTG ACGCGGTG             TTTTTCTATTTATAA 100 49
JC861_RS14400 2981489 .. 2981506 + -11.3  -2.64155   ATCAACGGCCTGAGA             GGCTCAC CACT GTGAGCC              TCCGTTTAAAACACA  80 54
        ebgR 2987158 .. 2987179 + -13.7  -5.30616   TCCGTAAGATTCTGA           CGGCAGCCT TTCC GGGCTGCCG            TTTTTCTTTCAGTAA 100 48
        ebgA NONE
JC861_RS14435 NONE
JC861_RS14440 2992503 .. 2992518 + -10.4  -4.84529   TTAAGATACAGAAAA              GCCACC TGAC GGTGGC               TTTTTGCATTTATGA 100 47
        ghrB 2995763 .. 2995793 + -13.5   -3.5511   TTTCCTGTCTGAACA       CAGCAGATTATCT TTAGC GGATAATCTGCTG       TCTTTATAAGTCCCG 100 42
JC861_RS14460 2996356 .. 2996367 +  -3.6  -3.44284   AAAAGACGGATATAC                CCGG AGAG TCGG                 TATTGTTCGTCAGAA  51 40
JC861_RS14475 2999230 .. 2999255 + -13.3  -3.94188   CGTTTATCTGCCGGT         TCTGCCCCGCA ATAC TGCGGGGCATA          TTATTTCAGCTGCGT 100 44
JC861_RS14490 3000954 .. 3000980 + -13.1  -3.52192   AACTTCTCCCAGTCA         GATAACGCCCT TTCCC GGGGCGTTATC         TTATGTCACCTTCCC 100 39
JC861_RS14495 3001668 .. 3001687 +  -3.6   -5.2853   ATGTTGCTCTCCGTA            AACTGTAT AGAT ATACAGTA             TTTTATTTTTAAATA  80 369
JC861_RS14505 3002499 .. 3002519 +  -7.5  -2.96695   ATAATCCGAATAATT            TCTGCCGCT CAA AACGGCGGA            TAATTTCATCGGCCA  58 406
JC861_RS14545 3008329 .. 3008345 +  -3.7   -3.8709   CTGGCACTCGTATGA              CTGGT GTAAATA ACCAG              TTTCTGAGCGGCTTT  58 236
JC861_RS14600 3017058 .. 3017082 + -11.5  -3.30124   ATTCGGATCAGCCTT          CGAGCGTCA TCATGCT TGACGCTCG          TTGTAACAGATAAGC  86 135
JC861_RS14605 3018251 .. 3018265 +  -8.6  -2.72344   CAGCCCGCTGCAAAT               TCAGAC GGT GTCTGA               TAATTCAGCGTGGAG  60 336
JC861_RS14620 3020711 .. 3020729 + -10.3  -2.78463   AACTTCCCGATAACC             TCGCCAC GCTCA GTGGCGA             TATAATAGGAGGCCT  75 45
JC861_RS14630 3022424 .. 3022445 +  -4.5  -2.79915   GATAGTTAGAATGTT           TGAGTAATT ACAC ATTTACTCA            TATAATCAAATAAGT  49 19
JC861_RS14670 NONE
JC861_RS14675 NONE
JC861_RS14680 NONE
        sctR 3031907 .. 3031934 +  -2.1  -4.36914   CCTGTTATTCAGTTA        TCAGTT-CTGAT GATGG ATCAGCAACTGC        TTTTCTGCACCGGAC  58 16
        sctS 3032182 .. 3032195 +  -2.4   -3.4948   GTAATGTTATTAACC               GGAT TAATTT ATCC                CTTTTTGATCTCCTT  47 37
        sctT NONE
JC861_RS14700 3034059 .. 3034078 +  -5.8  -2.54919   AACGATAAATTAAAA            CGTTAAAT CTAC ATTTAGCG             GTATTATGCATACAT  52 39
JC861_RS14705 NONE
JC861_RS14710 NONE
        sctC 3037630 .. 3037657 +  -2.8   -2.9356   TCATCATCATAAACA        CAGTTTTTAATA CGGA TATTAATACCTG         TCTATGACTATCACT  43 29
JC861_RS14720 NONE
        sctF NONE
JC861_RS14730 NONE
JC861_RS14735 NONE
        sctI NONE
        sctJ NONE
JC861_RS14750 NONE
JC861_RS14755 3042360 .. 3042380 +  -2.3  -3.89881   CACGATATTAAAAAT            GACCGCGCC TTT GGCCGGGAC            TTTATCCAGATTGGT  54 97
JC861_RS14765 3043458 .. 3043474 + -10.8  -2.65298   TAAAATAACCAGTCA              GGGCGG TCACC CCGCCC              GTTCTGCTGCCTGAA  76 33
JC861_RS14780 3045415 .. 3045436 +  -2.3  -5.42131   GGCCATAATTTTTCA           TATTTCGTT GTTC AGCGAAGTG            TTTTTTCTGTGCTTC  78 33
JC861_RS14785 NONE
JC861_RS14790 3046902 .. 3046920 +  -4.6  -4.33417   ATTCTATGAATCTGA             GTGCATTT GTC AAATGCAA             TTTATTCTCAATACC  66 422
JC861_RS14800 3048018 .. 3048038 + -14.1  -3.31144   ATCTGAGAAATGGTA            CCGGATTGT GAA ACAATCCGG            TTATAAAACTGAAAA  95 93
JC861_RS14820 3051809 .. 3051824 +  -3.2   -3.3353   TTTCTCCGTCACAAT              CCGG CCAGTATA CCGG               TATATTTATACGAAG  47 405
        fldB 3067635 .. 3067650 +  -5.4  -4.07568   GACAGCATCCGCTGT              CC-GGCT GAA AGCCCGG              TTTTCCCCGGGCCCG  63 484
        ygfZ 3069299 .. 3069341 + -24.9  -3.61239   AGCCTGATTTCCCGT CACCGCCGGGCGCAGCGAC TCCCT GTCTCTGCGCCCGGCGGTA TTCTGTATGAGTCTG 100 34
JC861_RS14925 3069978 .. 3070013 + -19.2  -4.13654   CTGGCTGCGCTGATA    AAAAAGGCCGGTTGTG ATAA CACAACCGGCCTTTTC     TTTATCGTTTACCAG 100 28
        zapA 3079819 .. 3079831 +  -2.7  -3.53343   CAATCTCAGCCCGAT                TTCAT ACA ATGAG                TTTAAGAACAACGTT  48 91
        ssrS 3080037 .. 3080048 +  -4.4  -4.16814   TGCGACGGCATCTTG                GAGA CCTC TCTC                 TTATTTATCTCCTGA  61 18
JC861_RS14975 3081078 .. 3081090 +  -4.1   -2.7094   TTTCGTGAATATGCA                GCAGA CGG TTTGC                ATTCTGTCCGTGCAC  43 416
JC861_RS14990 3084208 .. 3084237 +  -7.7  -3.30441   AGCATCATTTTACCG       CGCGCCATCACCG GGAC CGGCTGTGGTGCG        TTATAACCGATGCTG  62 140
        ppdD NONE
        tadA NONE
JC861_RS15060 3102501 .. 3102517 +  -2.2   -3.9693   AGAAATTAATTTCAT              CAGGTA CAATT TACCCG              TTGTTTCGATCAATA  53 124
        coaE NONE
        zapD NONE
        yacG 3104601 .. 3104631 + -11.9  -4.93296   TCCGTTTTATTTACA       GAAGAAAGGCGGG ATTCC CCCGCCTTTTTGC       TTTTTATGCTAATCG 100 497
JC861_RS15095 3108647 .. 3108672 +  -6.2  -3.45386   AGTACGGTTGACGGT         GCACGGAATGC AACCG GCAT-CTGTGC         TTCGTTCTCGAATGT  61 125
JC861_RS15205 3134397 .. 3134414 +  -9.8  -5.64274   CTGAGACCTGAAAAA             CCCGCG CAATGT CGCGGG              TTTTTTTATACCTGC 100 49
        leuA NONE
        leuB NONE
        leuC NONE
        leuD 3139248 .. 3139276 +  -8.9  -4.64657   TTCCACCATTGAACC        CCTGCCATCAC CCCTTTT GTGATGGCAGC        TTTTTCCCCGTTTCC 100 54
        sgrR 3141273 .. 3141293 +    -4  -3.05816   GTTTTTAACAGACCA            CGGTTG ATAAAATCA CAACCG            TTAAATAAACCCTGA  47 147
        mutH 3142390 .. 3142404 +  -3.5  -4.17491   CTTAAACGCTATTTC               CGGTG CTGAT CACTG               TTTTGGGAGTTTGCT  60 17
         agp 3143760 .. 3143781 +  -6.5  -5.42975   TATGTTCATATTCAT           GCTCGGC TTACCGTT GCCGGGC            TTTTTATTTATATCC  91 47
JC861_RS15245 3144923 .. 3144937 +  -9.2   -5.1675   TCTGACGTACAAAAA               CCCGCT CCC GGCGGG               TTTTTTAATACCTGC 100 46
JC861_RS15255 3146752 .. 3146798 + -24.7  -4.37658   GTGTAATCATCACTG AAAAACCCGCCGCAGCC-CTGA TTAT TCAGCGGCTGCGGCGGGTTTTC TTTTATCAGACGGTT 100 35
JC861_RS15270 3149524 .. 3149551 +    -8  -3.60792   CATATTGATACGTAA        TTCT-TTATTCAG TTG CTGAATAACAGAA        TTTACCCCTTCCGCC  66 145
JC861_RS15285 3152395 .. 3152423 + -13.3  -2.88645   ATTTGCCTCACAAAA        TGAGGCGAATAGC ATG GTTATTTGCCTCA        TCCTCTTATTATCCT  93 66
        metK 3160643 .. 3160658 + -10.4    -5.626   AACAGACATACAAAA              CCGGCT GAAA AGCCGG               TTTTTTTGTACACTG 100 52
JC861_RS15335 NONE
JC861_RS15360 NONE
JC861_RS15365 NONE
JC861_RS15370 3170758 .. 3170768 +  -5.4  -4.11692   CCTTCTTCGCACAAG                 CTTC CGT GAAG                 TTTTAAAGGTCACTG  65 9
JC861_RS15375 3171977 .. 3172006 + -14.5  -4.35646   TGAGCACAGTGTGAA       TAATAACGGGTAG TTTC CTGCCCGTTATTA        TTTCTGTTTAAATCT 100 55
        clcA 3175351 .. 3175367 +  -3.6  -3.29471   TAATGTCATAATCAT              CCTGCA ATGCA TGCTGG              TTGATATCATAGACC  49 352
        mtnK NONE
        mtnA NONE
JC861_RS15445 3187968 .. 3187982 +  -7.8    -5.252   TCCGGCGGCAGAAAA               CGGTGC AAT GCATCG               TTTTTTGTCACCCTA 100 46
JC861_RS15450 3188461 .. 3188474 +  -9.5   -4.7153   TTTCATGTAAAAAAA               CCGCC GGAC GGCGG                TTTTTGCACTTATTT 100 57
JC861_RS15475 NONE
        rbbA NONE
JC861_RS15485 3200136 .. 3200155 +  -5.6   -3.3514   CCCGGCCAATTCCGA            TGCCTACG GCGG CGGGGGCA             TTATAGGCTGTCAGT  57 41
JC861_RS15490 3200777 .. 3200810 + -12.5  -3.35679   GCGGCAAGGGAAGAA     TTCCGGGGAACATAC ATCA GTATGTGACCCGGAA      TTCTGAGTGCAGCCA  95 276
JC861_RS15505 NONE
        xylB NONE
JC861_RS15515 NONE
JC861_RS15520 3208256 .. 3208289 +  -4.5  -3.53012   ACTGACCAAAATCGC     TGCACTGACAGCCC TGATGAT GGGCGGGCAG-GCA     TTTGCGGCACAGGAC  55 175
JC861_RS15525 3209256 .. 3209277 + -14.5  -5.68039   GAATAATGCATTCAC           GCCGTCTTC AGCA GAAGACGGC            TTTTTTTATCCGTTT 100 47
JC861_RS15530 3210553 .. 3210570 +  -4.8  -3.33162   CGGCAGCATAACGGC             GGCGGT TTCCAC ACTGCC              TTCTGCCATCGCCTC  51 488
JC861_RS15540 3212784 .. 3212811 +   -15  -3.02461   TTAAATCACCCGCAA        TCCTGATACTGC CCCG GCGGTATCAGGA         TGTTAAAAACCGTTC 100 37
        kbaZ NONE
        agaV NONE
        agaW NONE
        agaE NONE
        agaF NONE
        nagA 3221122 .. 3221141 + -10.7  -4.80487   TTCCTTTCATTATGA            GGCGCAG TTCTCC CTGCGCC             TTTCTTTTCCTTGTG 100 42
JC861_RS15595 NONE
        kbaY 3223425 .. 3223454 + -17.2   -4.8048   TTCTGTAACTCGTCA       GGCGGCACTGTG TTCCCC CGCAGTGCCGCC        TTTTTCATCTGCGAA 100 33
        malX NONE
JC861_RS15610 3226325 .. 3226360 + -11.2  -2.73735   TGACAGAAAAAAAAT    TGGCGACCTTGCTG TATTCCGT CAACAGGGTCGCCA     TAATTACCGATGTTT  77 38
JC861_RS15615 3229434 .. 3229474 + -13.6  -4.79826   GATTCCTGCCCGTAA  AAAAACCGCGATAATTGT CATTA ATAATTATCGCGGTTTTG  TTTTTACTGCTGTCT 100 48
JC861_RS15670 3241991 .. 3242019 + -10.2  -2.52681   AACAGAAATAAAAAA        AGCCACCGGTCA CATAA TGACCGGGGGCC        GTCTCTGTTTACTAT  73 40
JC861_RS15680 3245028 .. 3245043 +    -9  -4.66938   GTCAGCAATCTCAAA              GGAAGC CGGT GCTTCC               TTTTCTATTACCGGT 100 223
        tssF NONE
        tssG NONE
JC861_RS15785 NONE
JC861_RS15790 NONE
JC861_RS15795 NONE
JC861_RS15800 NONE
JC861_RS15805 NONE
JC861_RS15810 3278807 .. 3278831 +   -13  -4.34353   ATTAGGCTGATTTAT          CTCCCCTATT ACAGA AATAGGGGAG          TGTTTTTTCTCTGTG 100 31
JC861_RS15870 3292414 .. 3292425 +    -3   -4.4648   GATTCGAACACAAGT                CAAT TAAC ATTG                 TTTTATAATGAAAAT  63 6
JC861_RS15915 3299553 .. 3299581 +  -5.3  -3.09516   TACTTATCGATATCC        CTTCTGCCTTTTA ACT TTAAAGACAGGAG        TTCAATAATGAGCAC  53 95
JC861_RS15920 3299952 .. 3299966 +  -4.2   -2.8805   CTTACTGTCGCTCAC               GGAATG CTT CATCCC               TATATCAAGAATAGT  46 179
JC861_RS15955 NONE
JC861_RS15960 NONE
JC861_RS15965 NONE
JC861_RS15970 NONE
JC861_RS15975 NONE
JC861_RS15980 3310909 .. 3310922 +  -5.3  -4.23892   AGTAGTGTACTCTAA               CCATT TACA AATGG                TTTTACGTAGTTGAA  65 87
        folD NONE
        ybcJ 3317496 .. 3317513 +    -7  -5.61596   TAATTTGTGAATAAA             CCAGAG CATCGA CTCTGG              TTTTTTTATCCGCAT 100 44
        cybB 3318105 .. 3318127 +  -9.1  -4.77036   CGCTGAAATATAAAA           CGCCCGG CAGTCATAA CCGGGCG           TTTTTAATACTGAAG 100 49
        ppiB NONE
JC861_RS16035 NONE
        purE NONE
        purK 3323389 .. 3323409 + -10.4  -4.77757   ATAGTTCCATTCTGA            TGCTCGGC GTTCA GCCGGGCA            TTTTGCTTTTTACGC 100 62
JC861_RS16050 3324941 .. 3324954 +  -5.2  -4.07568   TCACTCCACAGCGTA               CGCC GCAACA GGCG                TTTTCCGGCACCGAG  65 260
        tesA NONE
JC861_RS16070 NONE
JC861_RS16075 NONE
JC861_RS16080 NONE
JC861_RS16085 3331644 .. 3331665 + -15.9  -5.42975   AAGACAACAGCAAAA           CGGCCTCTG GTGA CAGAGGCCG            TTTTTATTTATCTCA 100 50
        copA 3344237 .. 3344265 + -14.7  -5.52023   CTGACCTGATACCTG        ATAAGGGAGCGAA TAA TTCGCTCCCTTAC        TTTTTTCTTACTGAT 100 44
JC861_RS16125 3345152 .. 3345180 +  -2.3  -2.58544   CGGCGACCATAATCT        GCCGTCCATTTTG TGT TAAACTGGCAGGC        CTTGTGACACTGCCG  40 7
        ybaK 3346131 .. 3346142 +    -3  -4.14945   GCGCCCCGGGTATGG                TTCT GTAA AGAA                 TTTCGTTCTTATTGA  60 455
JC861_RS16145 3352929 .. 3352948 + -13.6  -5.38047   CCTGCTGAAATACAA            GCCCGGTT AGCG AACCGGGC             TTTTTTATATGCATA 100 51
JC861_RS16200 NONE
        rsmS 3365341 .. 3365371 + -11.9  -3.03104   CAAACTGCGCAATAC       TGACGGTGGTCAG GCCGG CTGAGCGCCGTCA       TCCTTCTCTTTTCCC  86 4
JC861_RS16225 NONE
JC861_RS16230 3374389 .. 3374404 +    -9  -5.79595   GCTTAAACATAAAAA              GGTCAC ATTA GTGACC               TTTTTTATTTTCACG 100 45
        tomB NONE
         hha 3375784 .. 3375802 +  -4.6  -4.10657   TAAACACCGGGTATA             CCGAAAAT TTT ATTTTCAG             TTTTCACCACTATAA  63 253
        tesB 3377312 .. 3377348 + -11.6  -5.45726   AACGTCCCGGCAATA   AAAAGCCCCCGCTGCAC ACCC GTG-AGCGGGGGCTTAC    TTTTTTTCGGCTATG 100 40
JC861_RS16280 3384416 .. 3384436 +  -2.6  -3.57144   AGCCGTTACCATAAA            CCTCAT CTTTTTATA ATGAGG            TTTACCGATGAAACG  48 44
        queC 3385153 .. 3385173 + -11.8  -5.04175   AATAATCATCTGTTA            CGCCCGGT GACCG GCCGGGCG            TTTTTCTGTCCTTCG 100 36
JC861_RS16335 3396246 .. 3396258 +  -9.1  -2.88861   GTCACTGTGAATGCA                CCGCA GCC TGCGG                TGTGTGAGGATAATC  67 91
        ampG 3397808 .. 3397823 + -10.4  -6.01369   TCAAAAGTTTATAAA              GCCGGT TTTA ACCGGC               TTTTTTTATTCTTTA 100 72
JC861_RS16345 3398777 .. 3398800 + -10.3  -4.56597   ATCACATTTTTTCAC          TGCGGAGGG CAAAAA CCCTCCGTA           TTTTTACCAAGAAAC 100 41
        cyoA NONE
        cyoB NONE
JC861_RS16360 NONE
JC861_RS16365 3402988 .. 3403000 +  -6.3  -2.61199   TATGTACAACCTGAA                CATCA ATA TGATG                GTTGATTAAGAGTTG  54 4
        cyoE 3403923 .. 3403955 + -17.9  -3.72576   CACACTTTCTGTAAT      AACAAAATGGCAGGG CTT CCCTGCCATTTTGTG      TTTAGTAAAAACCAC 100 43
JC861_RS16375 3405765 .. 3405775 +    -4  -5.63103   ATTCACTGGTCATCT                 TAAC ACT GTTA                 TTTTTTTCATTGAGC 100 415
        panE NONE
        yajL 3407565 .. 3407590 +  -8.3   -3.6869   CAACAAATAAAAAAA         CGCCCGGCTGTT TAT GATA-CCGGGCG         TTTGAGATTACTGTA  73 31
        xseB 3411390 .. 3411405 +  -7.5  -3.15999   CCTGAAAACGACTGA              CCGCC CGGATC GGCGG               TTCCCTGTGTGAACG  62 26
        ispA 3412353 .. 3412366 +  -5.2  -3.64488   TAACAGCTAATCCGT               CCGG CACGTT CCGG                TATTTTCAGAAACTT  59 31
JC861_RS16470 3424534 .. 3424546 +  -6.3  -3.71998   ATAATGAACTATTGA                TAGGT AAA ACCTA                TTATATTAATCGGTA  63 118
JC861_RS16475 3425275 .. 3425290 + -10.4  -5.64274   TAAGAGATACAAAAA              CCAGCC TGCG GGCTGG               TTTTTTTGTGCCTGA 100 52
        sbcD NONE
JC861_RS16500 3434573 .. 3434583 +  -2.4  -4.56597   TGAACTGAAGAGAGC                 ACGG AAA CCGG                 TTTTTCCGACAAAAA  60 178
JC861_RS16505 3435329 .. 3435345 + -10.8  -5.93809   GTTAAAATATGCCTT              GCCCGC CTTGT GCGGGC              TTTTTTTTATCAGGC 100 136
        rdgC 3437406 .. 3437422 +  -5.8  -4.81083   ATACCCGCTGTTTAT             GCCCACG GCAG CG-GGGC              TTTTTCATCGTTACC  78 81
JC861_RS16525 3438910 .. 3438926 +  -4.3  -4.63527   CCTGCTGGATGGATA              ACACGGT GTA GCCGTGG              TTTTTGGCATCCTGC  72 112
        plsY 3446550 .. 3446563 +  -9.5  -5.71712   AAGAGGATTAAAAAA               GGCGC ATCA GCGCC                TTTTTTTGTGTCCGG 100 30
        rpsU 3448318 .. 3448343 + -13.3  -3.91357   TAGTTGCAGTTAATG         GCCGTGTTTCC GGAA GGAAGCGCGGC          TTATTATCGTTATCA 100 77
        dnaG 3450183 .. 3450196 +  -2.3  -3.14132   GAACAGCCCTGCATG               CCATG TCAC CAAGG                TTCATGGCCGAAGAA  43 94
        rpoD 3452179 .. 3452197 +   -16  -5.60993   ATCAGAGCATTATCA             GGCGCCGT TTA ACGGCGCC             TTTTTTTATGCACCA 100 52
JC861_RS16590 3452462 .. 3452481 +  -7.1  -5.09225   TTATCAGTGTATTAA            GCCACTC TTTAAC GGGTGGC             TTTTTTACATCCGGT  90 54
JC861_RS16595 3457600 .. 3457636 + -22.4  -4.68384   GCCGTTTTATTATCA    GCGCCCTCCCGGAATG TGGCC TGTTCCGGGAGGGCGC    TTTTATTACCTGCCT 100 41
        ampR 3469551 .. 3469561 +  -8.2  -3.57144   ACAACTCATGCATAC                 CGGG GCA CCCG                 TTTACCGGTGAACAG  71 373
JC861_RS16660 3479179 .. 3479222 + -15.4  -3.69395   CCGGTTCTGATAAGA CGGAAAGCAAAACGGCCTGC ATAT GCAGGCCGTTTTTTTATCTG TTATTAACTGATCAG 100 31
JC861_RS16675 3484306 .. 3484318 +  -6.3  -2.72371   ACAGAAAATAAAACA                GATGT TCA ACATC                ATATTATTTAAGAAA  54 2
JC861_RS16680 3485289 .. 3485322 + -12.5  -3.12253   CTTATCAGACTATTT     TTCCGGCCGG-TGC AATTACA GCAGCCGGCCGGGA     TACTTTCTCTTCCTG  93 41
JC861_RS16685 NONE
JC861_RS16690 NONE
JC861_RS16695 3486657 .. 3486668 +    -3  -3.66018   CGCGGTCTTCATATT                TACT ACTC AGTA                 TTGTTGAGCTAATAA  51 178
JC861_RS16700 3487128 .. 3487145 + -11.3  -4.92828   TAATATATTATTAAA             CATCCGC TCCG GCGGATG              TTTCTTTTTCAGTTT 100 73
JC861_RS16715 3489844 .. 3489862 +   -16  -3.44051   CCTGAAATGAAACAA             CCCCGCGT CAG ACGCGGGG             TTGTGATAGTGAGGA 100 49
JC861_RS16730 3493049 .. 3493073 + -12.3  -4.07246   GCTTTGTCTGATTTT          TAAAGGTGACA GGA TGTCACCTTTG          TTTCCTTTGGCATAA 100 41
JC861_RS16735 3493452 .. 3493464 +  -4.1   -5.1356   GGCTGAAAAATGCCT                TTGGT CAC ACCGA                TTTTTGTTAATACAG  78 3
        diaA NONE
        yraP 3494711 .. 3494727 +    -8  -5.63504   GAAACCGATAAGAAA              CCTGAC TTAAT GTCAGG              TTTTTTTATGGCCTT 100 56
        gltB NONE
JC861_RS16770 3505433 .. 3505460 + -11.4  -3.97602   TCCCTGCTTTAAATG        CAAAAAGACCGC TTTC GCGGTCTTTTTA         TTTATCGGTCTGTTA 100 60
JC861_RS16800 3509770 .. 3509785 + -11.8  -6.11644   CTAATCTGTACAAAA              CCGCGG TTTC CCGCGG               TTTTTTTTTGCCTGA 100 37
JC861_RS16805 3511411 .. 3511437 + -16.6  -4.86731   CGCCGTAAATATAAA         CACCGCGCCG CGTAAAA CGGCGCGGTG         TTTTATTTCAGGCGG 100 49
JC861_RS16820 NONE
JC861_RS16825 NONE
        tauC NONE
        tauD 3518936 .. 3518951 +  -2.6  -2.80074   GCAATTACACACATA              TAATTC ACCC GGATTA               TGCTATTCTGCCGGA  42 148
        degS 3520120 .. 3520135 + -10.4  -4.32857   TAAGGTGTAAAAAAA              GAGCGG ATAT CCGCTC               TTTCTGTTTACAGCA 100 51
JC861_RS16880 3526444 .. 3526463 +  -4.2  -3.14211   GATAAGTCTTTTTAC            CGGCTGAT AAAT GTCAGCCA             TTAATACACAGACAT  49 19
        kdsD 3527450 .. 3527462 +  -2.6  -2.62616   CATATGCATGATCTG                CTCC AGGCC GGGG                TGGTATAAGGACTGA  41 5
        kdsC 3528041 .. 3528054 +  -3.9   -3.4759   AAAGGCCTGTCCGTC               TGAAA AGAA TTTCA                TTGGTTATAGTGGCT  51 23
        lptC NONE
        lptA NONE
        lptB NONE
        rpoN 3531354 .. 3531370 +  -3.7  -3.74747   CATCCCGCCCTCAAA              TCAGC GTAAACA GCTGA              TTTGATACACATTGA  56 4
         hpf 3531754 .. 3531780 +   -13  -3.44527   AAAGCAGTGCTCTGA         TCCCGGTTACCA TGG TGGTTGCCGGGA         TTCTGATCCTAAGTG 100 93
        ptsN NONE
        rapZ NONE
         npr 3533603 .. 3533635 +   -12  -4.66938   ATTAATTATCAAAAT     GAGCACCCCC-CTCC TTCT GGTGTGGGGGTGTTC      TTTTGTATTGGAAAT 100 156
         rnk 3534455 .. 3534467 +  -9.1  -3.65812   CGGGTTTCAATATCG                TCGCC GGT GGCGA                TTATATTGGCCCACA  73 404
JC861_RS16945 3536822 .. 3536836 +    -7  -3.55487   AGCAGACGATCACTG               CCGCGG TGA CCGCAG               TTATAGTTGATATCC  61 404
        aroQ NONE
        accB 3550505 .. 3550517 +  -4.8  -3.88232   CGCACAGGCAATCCA                TCCG GGATA CGGA                TTCTTATCTGAAAAC  59 273
        prmA 3552607 .. 3552657 +  -4.8  -4.77567   TTGGTATATAAATCG TGCGTTTGCGTGATTCAG-TGAA TATATT TTAAGCAGTTTCACGCAAACGCA TTTTATTCTGAAAAT  74 53
        dusB NONE
         fis 3554189 .. 3554213 + -10.8   -5.5353   GCATTGAACCGAAAA          GCTCTTTCAG GATAA CTGAAAGGGC          TTTTTTGTTAATATC 100 56
JC861_RS17030 3555661 .. 3555672 +  -5.8  -4.99568   TTAAAAAGCAATAAC                CGGA GTGT TCCG                 TTTTATTTCCTCTTC  82 73
JC861_RS17035 3556574 .. 3556588 +  -5.6  -2.88663   CCAGAGTGCATCAAT               CCGCTC GCG GAGCAG               TGTGTGCCGCTCACT  49 465
JC861_RS17045 3558205 .. 3558220 + -10.4  -5.05712   TGAACTCATTCTGAT              GGCTGC TCCG GCAGCC               TTTTTCATTATTTAT 100 46
JC861_RS17050 3560788 .. 3560801 +  -3.8  -4.87803   CATGAAGATCAAATC               CGGT TAAGAC ACCG                TTTTGTTTGCGGATC  73 313
JC861_RS17060 3564099 .. 3564133 + -15.9  -2.63913   ATCATAATCAGGATA    CGGCAGATAACGGGCA AAAT TGCCCGTTATC-GCTG     TACTGTCCGGTAATA 100 40
JC861_RS17125 3581322 .. 3581348 +  -7.2  -3.87952   GATAAGTAAGTGACT        GCCGCGCCAGG AATCCA CCA-GCGCGGC         TTCATTTTATTCTTC  70 32
JC861_RS17285 3606727 .. 3606742 +    -9   -5.4833   CAGAAATAACATCAA              GGCTAC TTCG GTAGCC               TTTTTTATTGCCTAA 100 42
JC861_RS17295 3608408 .. 3608421 +  -8.1  -3.50832   CGCTAATTAGTTAAA               GGGGA GAAA TCCCC                TCTTTGAATTTCAGG  68 35
JC861_RS17330 3614639 .. 3614650 +    -3  -3.04144   TCTCCCGAAACTTTT                CTTT CAAA AAAG                 TATTGACACTACCAC  44 74
JC861_RS17335 3615200 .. 3615213 +  -2.3  -3.18735   TGTACCGAAACCTGA               CAGCT ATAC AGCGG                TTAATGAGATGTTCA  43 76
JC861_RS17340 NONE
JC861_RS17345 NONE
JC861_RS17350 NONE
JC861_RS17355 NONE
JC861_RS17360 3616424 .. 3616449 +  -3.4  -2.84098   ATAGTTTACGCACAG         CTTGATTTAG TGGCAT CTAAGTTAAG          TGGTTCATTAGACAA  43 132
JC861_RS17365 3616963 .. 3616975 +  -4.1  -2.57274   CTGGGGAATTCCACA                TCTGA GTT TCAGG                ATATTGATTATGGAA  45 78
JC861_RS17370 NONE
JC861_RS17375 NONE
JC861_RS17380 NONE
JC861_RS17385 NONE
JC861_RS17390 NONE
JC861_RS17395 NONE
JC861_RS17400 NONE
JC861_RS17405 NONE
JC861_RS17410 3621129 .. 3621164 +  -2.1  -5.95539   TCCGCAGGTCATGAA    TGG-ACCATGTTTT ATAGTTTTC AAAATATGGTGCCA    TTTTTTTATTTAGAA 100 397
JC861_RS17435 3626509 .. 3626536 + -10.6  -4.89339   CTGCTTTGTCTGCAA        TATCA-CCGGGGC AAA GCCCCGGCTGTTA        TTTTTCTCAGTCGTT 100 203
        rsmD 3636280 .. 3636299 +  -2.1   -2.6155   ACGCAGACGACTGAA            CAGGAGT CCGTAT GTTCCTG             ATTAATATTGGCCGG  40 5
JC861_RS17485 3636630 .. 3636665 + -11.2  -3.04188   ACGGATAAACCGTGT    CCCCTGCATTGACAGCG TTC CGC-GTGAATGCAGGGC    TATCTCCTTATACTC  72 59
JC861_RS17495 3637701 .. 3637743 + -13.6  -3.12999   TAATTCTGCTCCCCG CAACAGGAGCGCACAATT TGCCAAT AATTATGCGCCCCTGTTG TTGACTCTGGAGTAG 100 38
JC861_RS17500 3640250 .. 3640267 + -11.3  -5.71712   GTTACTGACTGAAAA             GGGATGC TGCG GCATCCC              TTTTTTTATCTCACC 100 47
JC861_RS17515 3642260 .. 3642296 +  -8.1  -3.02109   GATTGTTCATTTTTC   TGACA-TGCAGAGGCG CTATCC TGCCTCTGCGCTGTCG    TCTGTATCACATTTT  62 39
JC861_RS17520 3643572 .. 3643598 + -18.1  -3.02471   TTGATATGCTGTTCT         GTAACGCCCGG GATAA CCGGGCGTTAC         TGTCTGTAATCCGCC 100 46
        frdA NONE
JC861_RS17550 NONE
        frdC NONE
        frdD 3652489 .. 3652513 + -12.9   -6.0427   TGTCCGTTACAAAAA          GACCGGCTC CTGAAGT GAGCCGGTC          TTTTTTTTATCTGCT 100 45
JC861_RS17585 3657701 .. 3657724 + -12.4   -4.9934   GAAAATATAAAAAAA          CCGGCGGTCA TTTC TGAGCGCCGG           TTTTTATCATATTAT 100 231
JC861_RS17595 3661337 .. 3661362 + -19.1  -3.36671   CTGAAGAGAATAACG         GTCAGTCCGCC TGCG GGCGGACTGAC          TTGTGACGTTACAGT 100 37
JC861_RS17610 3663789 .. 3663835 +  -4.6  -2.72144   CACGTTTAATGCCGA CCCGGT-T-CAGAGGGGTTATT CAGCC AATATCCCCTCTGAATATCAGG ATTTACCCCGCATGC  48 55
        cstA NONE
JC861_RS17620 3666449 .. 3666468 + -10.8  -5.76633   GACTTCATGTAAAAA            TACCGCAA TAAT TTGCGGTA             TTTTTTTATGTATCA 100 52
JC861_RS17630 NONE
JC861_RS17635 3668695 .. 3668714 +  -9.2  -4.10164   TTATCCATAAAAAAA            CCGCCGGA TTTC TGCGGCGG             TTTCTGTGATAGTCA  85 484
        eptB 3682037 .. 3682067 + -18.4  -2.78547   ATGACTGAATAACAA       AAAAACCGCCGCTG AAT CAGCGGCGGTTTTG       TAATTCATCACGTAA 100 105
        epmB 3683700 .. 3683721 +  -3.7  -3.03124   AAAACACCGATCGAT           CTCCG-TCTG CGT CAGAGCTGAG           TATTACCACGTAAAC  46 5
JC861_RS17710 3684763 .. 3684784 +  -2.2  -5.76633   ATCTGAATAAAAAAA           CCACCATT TATATC GACGGTGG            TTTTTTTGTATCTGA  85 186
        aspA 3694104 .. 3694127 +  -7.4   -5.5074   ACATAGAACATAAAA          GCACGTCATC GCAA GGTAACGTGC           TTTTTTATTACCTTA  95 57
JC861_RS17755 3695536 .. 3695553 + -12.7  -5.13722   TTGTCAACGGCCCAA             TCCGCCC TCCG GGGCGGA              TTTTATTTTCCTGCG 100 72
JC861_RS17760 3696245 .. 3696276 +  -2.5  -3.60048   TGCGCCCGTATTCTG      CATAAAAAGAG CACACTCACA CTTTTTTTATG       GTTTTTTGACAGAAA  50 63
JC861_RS17765 3696529 .. 3696550 +  -9.5  -5.64274   AAGCTCTCAAAAAAA           CAGACTTGT TCGC GCAAGTCTG            TTTTTTTATGCGTGC 100 144
JC861_RS17845 3721111 .. 3721134 + -16.8  -5.76633   CCGGCTCTGTGACAA          GACCCCCGAT AATG ATCGGGGGTC           TTTTTTTATGTCTGA 100 63
JC861_RS17850 3721930 .. 3721940 +  -8.2  -3.10187   ACCGGTTGCCGATAC                 GCGG GTA CCGC                 TCCTTTCTGTGTGTG  62 429
JC861_RS17860 3725732 .. 3725753 +  -6.6  -2.91582   CACACACCTGTAACA           CA-CGGAGG TTATT CCTCCGCTG           TCTGTCACTGCAATA  58 191
JC861_RS17865 3726748 .. 3726770 +  -7.6  -5.40625   AAAATGAGAGTAAAA           GCGCCCTGCT GAT ATCACGGCGC           TTTTTTCTGTACTAT 100 55
JC861_RS17895 3732554 .. 3732580 + -15.1  -4.23213   CTTTGCCAACAATCT         GAGGCTCCGCC ATACC GGCGGAGCCGC         TTTGTTCAGTCTGCC 100 90
JC861_RS17905 3734030 .. 3734051 +  -5.9  -3.27029   TGCGACCCCCAACCC           GGTGGTTGAG GTG CT-GACCACC           TGTTCATTGCTGACA  54 218
JC861_RS18000 3750485 .. 3750526 +  -3.5  -3.21934   AACGTTTTCAGCAAA TCTGGGACCCTCTCCGCGGA TAA TCCGCCG-GCCTGTCCCTGA ATTTTCTCCGCCCCG  48 3
JC861_RS18005 3751914 .. 3751929 + -10.4   -5.1675   CAATAAGCCAAAAAA              GGAGGC AACC GCCTCC               TTTTTTACTGCCTGA 100 300
JC861_RS18030 3760113 .. 3760136 + -16.8  -4.96848   TATTGATAAAAAAAA          TCCCCCTGTG GCAA CACAGGGGGA           TTTTTATCTCAGCGG 100 92
JC861_RS18040 3769098 .. 3769112 +  -4.3  -5.00412   AAAACCGCGGTACAT               CAGAT AACGC ATCTG               TTTTTGCTTCTCTTT  79 83
JC861_RS18050 3770141 .. 3770152 +  -5.8  -3.04144   AACCATAAGTAACTA                TCCG TATC CGGA                 TATTACAGATAAAAC  54 402
JC861_RS18055 3771022 .. 3771049 + -11.4  -5.03314   TTACTTCTGATATTT        TCAGGCCTCTTT TAAT AAAGGGGTCTGA         TTTTTTGAAAATACA 100 31
JC861_RS18060 NONE
JC861_RS18065 NONE
JC861_RS18070 3775516 .. 3775528 +  -3.3  -4.50976   TAGACATACATAAAA                TCCGG AAA CAGGA                TTTTATCCTGTCAAA  63 189
JC861_RS18075 3776472 .. 3776498 +  -7.4    -5.626   ACAGGCACCCGAAAA        CCCGCGCTAAT CCGAGT ATTA-CGCGGG         TTTTTTTATCGCATC 100 58
JC861_RS18080 NONE
JC861_RS18085 NONE
JC861_RS18090 3780395 .. 3780422 + -17.2  -2.89564   AACAGTAACCCGGTA        CTCCGCAGATAA CTGA TTATCTGCGGAG         TCTCTCCCCTCAGCC 100 33
        hdcC NONE
JC861_RS18105 3785344 .. 3785380 +  -5.1  -2.90763   CTGCCCCCTTACGGT   TCGTTGCCGGCGCAGA CGCCAA TCC-TGCCGGCAACGC    TCTCTAACCTATACA  52 64
JC861_RS18110 NONE
        hisS 3788260 .. 3788277 +  -9.9  -6.04324   GTAATATTATCAAAA             GCACTGT TTTT ACAGTGC              TTTTTTGTTTTTTGA 100 52
JC861_RS18125 NONE
JC861_RS18130 3791702 .. 3791712 +  -2.4  -2.55999   GACACTGATGATGAA                 ACCG GCA CGGA                 GTTAATCTGAACTGA  39 10
JC861_RS18135 3792721 .. 3792737 +  -9.3  -5.65177   GCGATGTTCACTCAG              CCCCCGG TTT CCGGGGA              TTTTTTTATACGTAT 100 63
JC861_RS18140 NONE
JC861_RS18145 3794146 .. 3794180 + -10.1  -3.60296   TCCAGCGCCAGGCGC    CCGGAAAGAT-GCACC AGCC GGTGCGGTCTTTCCAG     TTTCCGGTAGGCATC  77 158
JC861_RS18170 NONE
JC861_RS18175 NONE
JC861_RS18180 NONE
JC861_RS18185 NONE
        modD 3803005 .. 3803043 + -13.2  -4.37092   CTATAGTGAGTTAAA   GGATAAACCGGTCAGGTC ACT GAACCGACCGTTTTATCC   TTTTGTCCGGCAAGT 100 58
JC861_RS18195 3805053 .. 3805073 + -14.1  -3.65314   CAATGCCGCATACAA            TCCCGCATA AAT TATGCGGGA            TTGTTACCGCTTACG 100 50
JC861_RS18230 NONE
JC861_RS18235 3815364 .. 3815385 + -11.7   -5.5454   GATTAATACAGAAAA           GGGATAACT GAAC AGTTATCCC            TTTTTATTTATTTGA 100 48
JC861_RS20935 3836369 .. 3836383 +  -3.6  -3.74526   TTACCATCAAAACAT               TATCAT TCA GTGATA               TTGTTAAATTAATAA  56 352
JC861_RS18340 3836949 .. 3836979 +  -7.7  -3.28712   TTTATGACGTAAAAA      TGGCAGG-ATGCAG ACAT CTGTATGCCTGTCA       TTCTCCGCAAAAAGG  66 41
JC861_RS18345 NONE
        sctJ NONE
JC861_RS18355 NONE
JC861_RS18360 NONE
JC861_RS18365 3839877 .. 3839887 +  -5.4    -4.652   TTAAATTGTTGCTGA                 CTGA TAT TCAG                 TTTTTGCGCTAATTT  75 281
        ahpC 3846317 .. 3846335 + -14.6   -5.0133   TCTTATTTACTGTTA             TCGGGTGC ATT GCACCCGA             TTTTTTAAGGGAATA 100 60
        ahpF 3847970 .. 3847989 + -13.6  -5.95539   GTTGTTGTACCCAAA            GGCATCCG GGGG CGGATGCC             TTTTTTTATTTCCCG 100 52
JC861_RS18415 3851017 .. 3851037 +    -4  -4.82154   ATCATAAACAAAAAA            GGCTTG CAGTCAACA CAAGCC            TTTTTAATATCCGTT  71 34
JC861_RS18485 3879257 .. 3879267 +  -8.2  -3.30159   ATCAGAGCAATGTGA                 GCGC CCG GCGC                 TTATCGGGGGATTAC  69 58
JC861_RS18490 NONE
        narH NONE
        narJ 3885319 .. 3885331 +  -3.3  -2.68279   TTCCCCTGCGGCGAA                AGGAG TAA CTCCA                TGAATTTCCTGAATA  42 10
        narI 3886047 .. 3886064 + -12.7  -5.60993   TAAATGCACAGTTTT             GGGTGGC TCCG GCCACCC              TTTTTTTATCACCGA 100 64
JC861_RS18515 3889126 .. 3889138 +  -5.5  -2.87564   AGTACGACGTCATCT                GACGG AGT CTGTC                TCTCTGCGGCGGTAC  50 24
JC861_RS18520 3889807 .. 3889836 +  -2.1  -4.21936   CGGACGCCTTTTGCT       GGCGGTCTGAATT TGGT AATTAATGCTGCC        TTTTGCAGTTATAGC  55 16
JC861_RS18525 3891503 .. 3891521 +   -16  -5.23016   TCATCATTATGAAAA             TGCCCGGC ACA GCCGGGCA             TTTTTTGACTTATTT 100 42
JC861_RS18535 3893815 .. 3893827 +  -9.1  -3.04144   TTCATTAATAAACCG                GGCCA GCG TGGCC                TGTTCCAGATAACCG  66 385
JC861_RS18545 3895580 .. 3895594 +  -7.1  -5.31545   GATATCCGCTAAAAA               GACCC TCTGC GGGTC               TTTTTTAGTCTTCTT  91 48
JC861_RS18570 3901443 .. 3901478 +  -6.8  -2.66873   GTCTGCAAGGACTGC    GCCCGCCACTGCATAAT AAA GTCA-GCGGTGGCAGGC    ATATTTCATGAAGCT  56 78
JC861_RS18575 NONE
JC861_RS18580 NONE
JC861_RS18585 NONE
JC861_RS18590 NONE
JC861_RS18595 NONE
JC861_RS18600 3907208 .. 3907231 + -14.6  -4.32034   CTGACCTCCGCTTAC          GCGCCGGTAT TCAC GTACCGGCGC           TTTTCCTCCTGCTGC 100 37
JC861_RS18645 3916962 .. 3916987 + -19.1  -4.58395   CGTAAAATAATTTAC         CGGCGGTATCC GGCC GGATACCGCCG          TTTTTCCGGGATAAC 100 31
JC861_RS18655 3919591 .. 3919610 +  -6.4  -2.62735   GCCGGTGCATTACCG            CCGGAAAA ATAA TCTTCCGG             TGGTGTGCCGCATAT  54 14
         vsr NONE
JC861_RS18665 NONE
JC861_RS18670 3921531 .. 3921557 + -13.8  -3.10389   AATACCCCGTTATAC         GGCGGATACTAA AAC TCAGTATCCGCC         ATTTCTGTACTTTCT 100 48
JC861_RS18675 3922381 .. 3922398 +  -5.6  -4.07687   AAAGTGTAAGCATTT             GTGTGA AAAGTG TCACAC              TTTTACCGGCGCGAT  68 451
JC861_RS18680 3923183 .. 3923199 +  -6.5  -2.50935   ATTGTTGTTATGCAT              CAGGAAG ATA CATCCTG              CTTCCTGCCTCACAT  53 66
JC861_RS18685 3926191 .. 3926210 + -10.8  -5.79595   TGCTGTAAGTAAAAA            GACGAAGA GGGA TCTTCGTC             TTTTTTGTTTTCAGA 100 50
JC861_RS18690 3927754 .. 3927769 +  -4.6   -3.0644   GTCTTTCAGTCATTT              CTTCGG ATTA CCGACG               TATTCAGAATTGCAT  50 186
JC861_RS18695 NONE
JC861_RS20950 3928761 .. 3928774 +  -3.8  -2.91735   ACATCAGGCAGAGTT               TCGC ATTAAA GCGA                TGTGTCGCGTGTTGA  46 60
JC861_RS18700 3929587 .. 3929599 +  -3.3  -3.04398   ACCAGAACCTCGCTT                AGGAC TGT GTCCA                CTTTTGGAGGGGAAG  44 24
JC861_RS18705 NONE
JC861_RS18710 3930341 .. 3930389 +  -3.4  -3.74872   AAACTATATATTTTT C-TATTAACTATCTGATGATAAT TGCT GTTCTCACCAGATAGTCAATACG TTTCATCAAGTGCAT  53 39
JC861_RS18720 3933372 .. 3933386 + -11.4  -5.41143   GGGATTTGTGCGGTG               GCGGGA GAA TCCCGC               TTTTTTTCCGCACTG 100 482
        ampH 3934870 .. 3934900 +   -17  -3.00498   ATCTGTGATACTTAA       GAACATGCCCGC ATCAGGC GCGGGCATGTTC       TGTATATGAAGTGTC 100 33
        rtcR 3938730 .. 3938757 + -17.1  -2.87683   GCCGCTGAAATGACA        GAGCCGGTCAG CATTCA CTGACCGGCTC         TGTATACCGGGATCT 100 33
        pepA 3942813 .. 3942840 +  -7.7  -4.50976   AGCATAAAGGTAACG        GGGGATTGTGC TATCCT GAGCAATCCCC         TTTTCTGCTATCAGA  82 73
JC861_RS18765 NONE
JC861_RS18770 3946249 .. 3946264 + -10.4  -6.06723   GAATGAGTAGCAAAA              CCAGCC TCCG GGCTGG               TTTTTTTTTGCACAA 100 49
JC861_RS18775 NONE
JC861_RS18780 3947778 .. 3947800 +  -4.3  -4.15841   TGCGTGTTTACTTTG           TGTGATAAT TATTT ATTATCATA           TTTATCGTTTCATAC  61 66
JC861_RS18785 3948494 .. 3948509 +  -3.3  -4.42386   TACAGTCATTACACG              TGTGA CGGATA TCACA               TTTTGTAACTGACAA  63 115
JC861_RS18790 3948889 .. 3948902 +  -8.1  -4.68593   GCGGACACAAAAAAA               CCTGC CGCG GCAGG                TTTTTCAGTCATGGC  86 44
        argF 3950709 .. 3950724 + -10.4  -6.11644   GTATTTATTTCAGAA              CCCCTC AATT GAGGGG               TTTTTTTTTGCCTGG 100 240
        pyrB NONE
        pyrI NONE
        ridA 3952703 .. 3952723 + -16.9  -3.34089   GAGATGACGTTGATT            GAGCCCCCT GCA AGGGGGCTC            TGTTCATTATTAACC 100 74
JC861_RS18835 3956822 .. 3956834 +  -3.3  -3.70149   CATTTTTACACTTAA                CCGGA GTG TGCGG                TTTACCTGATGTCGC  51 81
        nrdD NONE
        nrdG 3959724 .. 3959736 + -10.5  -4.56597   TCATCCAGCCGCAGC                CCCCG CAA CGGGG                TTTTTGCGGCGACGG  95 109
JC861_RS18860 3961132 .. 3961142 +  -4.6   -3.5394   CAGTGCAAATCAAAT                 TCGG CTG CCGG                 TTTAAAGCCCCATTT  53 131
JC861_RS18875 NONE
JC861_RS18880 NONE
JC861_RS18885 3964663 .. 3964685 + -14.8  -3.36175   AGTAACAGAACAGAA           CGGGCGCGAT ATA AGCGCGCCCG           TTATCCGGCTTTATT 100 36
JC861_RS18895 3966593 .. 3966606 +  -6.7  -3.15579   GGCAGAGATTGCAGT               GACGA TATA TCGTC                TTAATACGGAATTAC  57 355
JC861_RS18920 NONE
        btsR 3973405 .. 3973431 + -16.5  -4.98255   AGGCGTATAAAAAAA         GCCCGGCAGGG ATATC CCCGGCCGGGC         TTTTTATGATTCAGA 100 59
        yhbY 3991993 .. 3992037 + -14.4  -3.56162   ATATTTATAAAAAAA TGCCACCGG-CAGATGATTTC TGAT GATATCGTCCGGCCGGTGGCA TTCCTTTCAGATTTT 100 48
        dacB 3994395 .. 3994424 + -12.9  -3.72576   ATTACTGAGTTGACA       ACAAAGCCCGGTA CAAG TGCCGGGCTTTGC        TTTGATAAGAGAAGC 100 33
        ispB 3999851 .. 3999870 + -12.2  -5.80364   ATCACAGAGAAAAAA            CGGGATCT GTAA AGATCCCG             TTTTTTTATTCCGGT 100 40
JC861_RS19065 4001134 .. 4001163 + -15.3  -3.57144   TAGTTATAAAAACAA       TAAAACCGCTAAT CATA ATTAGCGGTTTTA        TTTACGGCTCAAAAA 100 51
        argR 4003082 .. 4003107 + -16.1  -6.38492   TTAATCATACAAAAA         CCGCGCGGTAC TGAT GTCCCGCGCGG          TTTTTTTTTCTTAGT 100 48
         fbp 4005715 .. 4005731 +  -9.4  -5.68023   GTAAGAGAAGGAAAA              GGCGGT ATACC ACCGCC              TTTTTTTCGTTATAA 100 47
         ppa 4006349 .. 4006366 + -11.3   -5.7946   CAGAGACAAAAAAAA             CCGCTGT TTTC ACAGCGG              TTTTTTTATTCACAG 100 55
        msrA 4013158 .. 4013189 +  -5.2  -5.29742   GCTATACTGCACATC      CGCGCACAGA-CA AATTGGA TGCTCTGTGCGCC      TTTCTTTTTTTATAT  84 60
JC861_RS19115 4014764 .. 4014784 +  -2.6  -4.09685   TTTCACTCATTGCAC           TCAGATGGC GTTT GTC-TCTGA            TTTTCGGCGGTAAAA  56 117
JC861_RS19135 4017594 .. 4017611 + -12.7  -3.36341   TGTCACATAAAAAAA             CGCTGGC CTGA GCCAGCG              TCTTTCAAAGATGTT  95 50
        queG 4035185 .. 4035197 +  -7.7  -2.81547   TCACTGTCTGAATAA                TCACC GCT GGTGA                TCGTTCATCTGCCCC  61 436
        rsgA NONE
         asd NONE
        mscM 4042178 .. 4042191 +  -3.1  -2.88768   ATAAAATTTAAGATA               TACTG CTGA CAGTG                ATTCTTCATCTTAAA  43 60
JC861_RS19260 NONE
JC861_RS19265 4043602 .. 4043626 +  -9.2  -3.14793   TCTGAAAGAAAAAAA          CCGCTGGAAG AATAA CATCCGGCGG          CTTTCTGTTGATCTG  72 59
        rarD 4048595 .. 4048613 + -11.7  -2.87211   ATACTCTGTAAGACA             GCACCGG GTTCG CCGGTGC             TGTCTCCGGGAGGAT  81 40
JC861_RS19290 4049557 .. 4049583 +  -5.1  -3.88291   TTTCCAGCCGATATC        TTCCTGTTCGGC CAGA GCCGA-CAGGGC         TTTATCGAACTCATC  63 440
        cyaY 4056322 .. 4056371 +    -8  -2.62184   ACGGCACAAAAACTG TGCCGTCGCA-TATCA-GCCG-CGG TGC CCGGCGGCCTGATACTGTAACGGCC TGATATCCGAACGGA  60 53
JC861_RS19345 4061262 .. 4061275 +  -3.8  -3.08679   GGTGCAGATAATGAA               GCCT TACTTC AGGC                TCTTCAATGAACAGA  48 2
        hemX NONE
JC861_RS19355 4063900 .. 4063919 +   -10  -5.60993   TTTCTATGATACAGA            GCCAGTCC TGCC GGATTGGC             TTTTTTTATACCGGA 100 55
        rhlB NONE
        gppA 4083440 .. 4083454 +  -8.6  -3.78208   TTTCAGTATATTATC               GTCACA TAC TGTGAC               TATTTTACTCTGCGT  75 104
JC861_RS19465 4086608 .. 4086618 +    -4  -4.02532   GGTGACCAGGGTCAG                 GAAT CAT ATTC                 TTCTGTTTATTATTG  59 217
        ilvY 4090185 .. 4090195 +  -8.2  -2.83403   GAAAACGGGCAAAGG                 CGGC ATT GCCG                 GTTTCATCACGGAAG  60 52
JC861_RS19515 4098721 .. 4098736 + -10.4  -4.38637   TCCTGAAAAGCGAAA              GGGGCA CGAA TGCCCC               TTTTAACTTATTATT 100 35
        hdfR 4100023 .. 4100037 +  -9.2  -2.83273   CAGTTGATCGTAATA               CCGGTG TAA CGCCGG               TCATTGATGATTTAA  70 17
JC861_RS19565 4106606 .. 4106630 + -11.4  -4.66609   TGTCACAGGGTAACC          GGTAAGGCGG TTCAT CCGCCTCACC          TTTTTCAATAAACTC 100 21
         def 4110585 .. 4110630 +  -9.7  -4.31587   CCCGCAGTCTTTATC TGCCACAGACCGCAGCAGCGC ACGG GCACTGTTATTGTTTGTGGCA TTATTATTTTTACAG  93 43
         fmt 4111609 .. 4111642 + -11.8  -2.53244   CTGTAATTTTATTTC     GTAACCGGCATATC CTGTTC GGTATGCCGGTCAC      CCTTTCTCTTTATCA  81 35
        rsmB NONE
        trkA 4114368 .. 4114379 +    -3  -2.89607   GCCAAGTCCGTTCTT                CTTA TAAA TAAG                 TACTTAATATTTTGA  43 19
        mscL 4114923 .. 4114933 +  -3.2  -4.15932   TACTACTGGCCTCCC                 GGTA ACC TGCC                 TTATTGTGTTTTTCT  60 80
        coaA 4133724 .. 4133745 + -13.1  -5.08824   TTTTTCTGTTAAAAA           TAAACCGGC TCAG GCCGGTTTA            TTTTTTGAATCCACA 100 45
        trmA 4146044 .. 4146066 + -11.4  -5.42514   GCGTTTCCCCGGAAA           GTTCTTGATC AAT GATCAGGAAC           TTTTTTACTTTATGA 100 49
JC861_RS19870 NONE
JC861_RS19875 NONE
        cbiM NONE
JC861_RS19885 NONE
JC861_RS19890 4149597 .. 4149618 +  -8.7  -5.31545   ACGGATACAAAAAAA           CCGGTCACT TCAG AGTAACCGG            TTTTTTCATATTCTT 100 42
        sthA 4152803 .. 4152822 +  -6.4  -3.00994   CGAGTTTGCCGCTGT            CCAGTTGC GCCA GCAACTGA             TGTGTCTGAGCTTCA  53 525
JC861_RS19925 4156010 .. 4156020 +  -3.2   -4.1822   GAATTCCTGTAATTC                 TGTC AGC GGCA                 TTTCTTCCAGTGCCA  60 244
        argE 4161698 .. 4161724 + -12.3  -4.21908   CCCGGCATAACCTTC         TCAGCGGACAG CCTGC CTGTCCGCTGC         TTTTCCCTCATCATG 100 31
        metF 4162872 .. 4162905 + -12.7  -2.55085   GTGGCATAGAAAAGA     TAACGATATCATTGA GTAA TCAGTGGTATCGTTA      AATTATTTTGTATTT  86 32
JC861_RS19960 4165009 .. 4165030 +  -7.9   -3.5525   ACCACACTCAATAAA           GCCCCTGTG ATTT TACCGGGGC            TTTACAACAATATCT  68 45
JC861_RS20965 4166591 .. 4166604 +  -3.8  -2.91735   ACATCAGGCAGAGTT               TCGC ATTAAA GCGA                TGTGTCGCGTGTTGA  46 60
JC861_RS20970 NONE
JC861_RS20975 4167465 .. 4167476 +  -2.2  -4.18506   CATGTAATTCCTGTG                CGGA ACAC TCTG                 TTGTTTTCAGAGTAA  55 73
        metJ 4175944 .. 4175972 +  -7.6  -5.24129   ACAGACATAAAAAAA       CGCCCTG--TGAAA TAT TTTCATTCAGGGCG       TTTTTTATGGAACAG  95 78
        priA 4178859 .. 4178890 +  -7.3  -4.59109   AGAATGATTAATAAA      CCGTCTGAATTTC ACTTAA GAAGCTCAGGCGG       TTTTTCACAGGTATG  81 151
        cytR NONE
        ftsN 4180980 .. 4181005 + -11.8  -3.96224   CTGAAGTTAATTCTG         TGCTGCCGGG AATATA CCCGGCAGCC          TTTCTCCATCCTTTA 100 65
        hslV NONE
        hslU 4182946 .. 4182979 + -12.6   -2.5054   AGACATAATATTATT     CAGACTGTACGGGTG TATGC TACCCGT-CAGTCTG     CGTTATTATTTTTGT  86 54
JC861_RS20040 4183972 .. 4183985 +  -5.2  -4.32951   GTAACCCGGATTATT               GCGG AATCTG CCGC                TTTCTTGATTCAGAT  68 37
        rraA 4184656 .. 4184672 + -13.7  -4.58466   CACAGACAGCAAAAA              GGGCGGA ATA TCCGCCC              TTTTGTCGTTATGAC 100 54
JC861_RS20055 4186262 .. 4186273 +  -4.4   -3.3862   CACCGCAGCGAATCG                CGTA CTCT TACG                 TTATCGCGTGTTTGT  51 41
        glpK 4187873 .. 4187892 +   -15  -5.24129   CGTTTTAACGCTCTG            CCGCCGGT TAAT ACCGGCGG             TTTTTTATGCGCGAA 100 56
        glpQ 4190647 .. 4190664 + -12.7  -4.95547   TGCGAAACAGAACAA             CGGGCAC CGCG GTGCCCG              TTTTCTTATTATCGG 100 53
         fpr 4192958 .. 4192979 + -13.7  -2.90194   TACTGGTGAGCCTGT           GGCAGCGGG TTTT CCCGCTGTC            TCTGCTTCAGAGGCT  93 32
JC861_RS20090 4194097 .. 4194125 +  -5.4  -2.83566   CGACACAGTAAACAG       TGGC-CGAAA-AGC AAA GCTATTTCGCGCCG       GTTTCACTATACTGT  50 30
        tpiA 4195018 .. 4195049 + -18.2  -2.82208   GACGCCTGAAAGCAG      CAATGTGCGGGGTA TCAT TACTCCGCACATTG       TATCGTAACTCGTTT 100 47
JC861_RS20105 4197978 .. 4197991 +  -3.1   -4.3208   CAGTAGTTTTCTGTT               GGCAT TTTT ATGTC                TTTTCACTTATCCAA  61 295
JC861_RS20115 4203049 .. 4203064 + -11.8   -5.9663   TGTGATTCATTTACA              GCGGCC GAAA GGCCGC               TTTTTTTTCATCTTT 100 49
JC861_RS20120 4204783 .. 4204794 +    -3  -4.17089   TGGTTACGTACCGCC                GTTT CATC AAAC                 TTTTCGGCCTTTACC  60 350
        cpxR NONE
        cpxA 4207329 .. 4207358 + -16.6  -4.20367   CGCTGAAACGCTCTG       TAGTTACCGGGG AACCCG CCCCGGTAACTA        TTCTTTCTTAAGCAG 100 35
JC861_RS20140 NONE
JC861_RS20145 4209058 .. 4209077 +  -2.2  -2.77926   ACGCTAGTTCTTTTT            TTTTACAA GGCA TTGAAAAA             TAATTCAATATCATT  41 3
JC861_RS20150 4210064 .. 4210082 +  -4.7  -3.51924   ACAAATACTCTAGCT             TGTAAAT TTATT ATTTACA             TTCTCTCAATACCAA  55 264
JC861_RS20165 4213553 .. 4213580 +  -5.7   -3.1855   TCCATTTAACCATAT        GACTGTTGCTTT CAAAA AAAGCG-CAGTC        TTAGCTGTTGGCGGA  55 525
JC861_RS20175 4214882 .. 4214903 +  -9.5  -2.79302   TTATTTGATAAACTA           TTACCCCTT AAGA GAGGGGTAA            TATGCTCAACATCGT  70 58
        trmL 4215437 .. 4215452 +    -9  -5.46698   TCAGACACAAAAAAA              GACAGC CTTA GCTGTC               TTTTTTACTTTTGGC 100 54
        envC NONE
JC861_RS20210 4221036 .. 4221055 +  -7.8  -2.60496   CACCGGTAATTAATT            CGTCATCG GTTC CGATGCCG             GTATTTCCCGGAACA  60 28
        rfaD NONE
        rfaF 4225177 .. 4225187 +  -3.2  -3.17051   TGAAGAGTTCCCCGT                 CATG CGC CGTG                 TGTTAATCGTCAAAA  46 9
        rfaC 4226537 .. 4226552 +  -5.4  -2.91274   TGTAACAGGGAAGAA              TCC-CCG GCA CGGCGGA              TATCATTCAGATCCA  49 407
        waaA NONE
JC861_RS20265 NONE
        coaD 4233293 .. 4233311 +  -8.1  -3.56854   CACCACTTCTATCTT             CTGTCCG CAGTT CGGGCAG             TTCTCTCCCTGTTTT  66 89
       coaBC NONE
         dut 4239867 .. 4239916 +  -5.7  -3.38514   TAACGCCGTTATCTC CGTCACTTTTCTGACAGTGGTAC TGTT GTACTGCTGTCAGCAGGCAGATG TGTGTTTGCTTTAAC  57 47
        slmA 4240567 .. 4240592 +  -3.8  -5.82316   TTAGTTAAACTACTC         ACCCCGCCCG TTTTAT TGGGCGAGGC          TTTTTTTTACCTGCT  91 49
JC861_RS20330 4243148 .. 4243158 +  -2.4  -3.56142   GATTCTTCAATATCA                 TCCG GTT CGGC                 TTCCTTATTGATCGG  47 114
JC861_RS20360 4250411 .. 4250438 +  -9.9  -3.71213   AAAATAGTATTCCCC        GGTTCCGGC AATTTCCCGC GCCGGAACC         TTTACACTTCTCTGT  80 34
JC861_RS20365 4251069 .. 4251092 + -10.3  -2.88366   GGCGGCTGGCATAGA          CGGCTCTCA GCTCGA TGGGAGCCG           GTTCTTCATTCAGCC  68 111
JC861_RS20385 NONE
JC861_RS20390 4255648 .. 4255677 + -15.1  -3.35679   ACCGCAAATACAGTA       CAAAACAGGCCGC AATT GCGGCCTGTTTTA        TTATCAGTAAAAAGG 100 43
        fdhD 4266820 .. 4266843 +  -5.2  -2.69151   ACCCGGAACGCCTGA          TCCCCTGACT ATTC AGCCAGCGGA           TGATATATCCACAGA  49 18
JC861_RS20445 4269356 .. 4269384 + -18.3  -3.56643   ATTATTGATACATTT        CACCGGGAACAGA TTC TCTGTTCCTGGTG        TTTACCGGATATAAA 100 44
JC861_RS20450 NONE
JC861_RS20455 4273721 .. 4273731 +  -3.2  -3.67102   CTGTAAAATTCAATG                 TCTC CGC GAGG                 TTCTGATTTATGTAC  51 9
JC861_RS20460 4274705 .. 4274719 +  -5.6  -4.30995   AGGGATCGTTTACTG               GAAGCC GCA GGCATC               TTGTTTTATAACGAG  70 192
JC861_RS20470 4276516 .. 4276535 +    -5   -3.5627   CAGCGTATCGCCGTT            CCGCTCTGT GAT ACAG-GTGG            TTTCCCCGGTGATAT  53 352
        rpmH 4279919 .. 4279932 -  -2.3  -3.93695   TTTATTACTTAGAAA               CGGTC AGAC GAGCG                CGGCCTTTAGCACGA  53 1
        rnpA NONE
        yidD NONE
        yidC 4277653 .. 4277677 - -15.7  -3.58565   TAAATAATACTATAA          GACCGGCAGAG ATT CCCCGCCGGTC          ACGGGCTTATTTTTT 100 32
        mnmE 4275907 .. 4275920 -  -5.9  -4.08216   GGATTCGTGGCAAAA               CGCCG CGGT CGGCA                TTTATATGGCTTGTG  68 303
JC861_RS20440 NONE
JC861_RS20435 4266676 .. 4266691 -  -6.8  -5.02476   AGATGGTGCAAAAAA              GCG-CGC AGT GCGGCGC              GGAAATTCTGTTTGC  90 162
        fdnG NONE
        fdxH NONE
        fdoI 4261128 .. 4261146 -   -16  -4.19276   TTAAAATGTCGAAAA             GGCAGGGG AAA CCCCTGCC             TTCTGAATAATCACA 100 59
        fdhE NONE
        selA 4258287 .. 4258299 -  -9.1     -3.54   ATGATGTGACAAATA                CCGGA CTT TCCGG                CCAGCCGTCAGATAG  73 437
JC861_RS20395 4255648 .. 4255677 - -17.3  -2.81089   ACCGCAAATACAGTA       CAAAACAGGCCGC AATT GCGGCCTGTTTTA        TTATCAGTAAAAAGG 100 29
JC861_RS20380 4252954 .. 4252985 -  -7.3  -5.44119   GTCAGTGTAAAAAAA      GGCCGGAACG-GGA TACAG TCCTCATTCCGGCA      TACACTATTATCAGA  95 51
        accA NONE
JC861_RS20370 4250630 .. 4250664 -  -2.7  -4.05033   GTCACCGTATACAAA    TCC-CCGACCTGCGGC TGTT GCGGCCAGTGGGCGGA     AGGGGTGGAAAAAGC  58 338
JC861_RS20355 NONE
JC861_RS20350 NONE
        tehA 4246673 .. 4246690 -  -3.5  -2.94993   ATCGATAATAGTATA             TATGTTC AATA AAACATA              GATTTTTAAATTAAT  46 124
JC861_RS20340 4244809 .. 4244825 - -15.1  -3.49878   CAATCAAATTGATAA              CCGCCGG GAA CCGGCGG              CTGAATATTCCGGAG 100 106
JC861_RS20335 4243069 .. 4243100 - -11.6  -3.43033   GAGTAATACATAATA      CTCACAGCCCGC TGAAATAC GCGGGCTGTCAG       ACGACTTTAATTAAA  89 36
         rph 4241319 .. 4241336 -  -8.4  -5.29782   CACAGGCATAAAAAA             GGCGAC TATCAC GTCGCC              TTCTGATTAATTTTC 100 32
        pyrE 4240252 .. 4240268 -  -4.3  -5.40072   GTTCTCGGAAAAAAA              TCCGGGC CTG ACCCGTA              TCATGACCGGTCATG  90 372
        radC NONE
        rpmB NONE
        rpmG 4236617 .. 4236646 - -13.7  -3.21726   CCGGATAACAGGCAA       TAAAAAACCCGGC CGGA GCCGGGTTTTTTC        AATCAGAAAGCAGAA 100 42
JC861_RS20285 4235273 .. 4235303 -  -5.6  -3.82205   TTAACATACCAATAA       TAATTGGTAATG TTCTGTT CATTACCATTTA       AAATGCTCCCGATGA  63 23
JC861_RS20990 NONE
        mutM 4232912 .. 4232929 -  -8.5  -4.07568   GTGGCGCTGGCAAAA             GATGTGT GCGC ACACATC              CCGAATGTGGAAGTC  77 326
        rfaQ NONE
JC861_RS20250 NONE
JC861_RS20245 NONE
JC861_RS20240 4226063 .. 4226075 -  -5.5  -3.59979   GGCGGTTACGGTAAA                GGACA GTT TGCCC                TGACAGCAAAAGACG  58 108
JC861_RS20220 4222035 .. 4222047 -  -4.7  -2.62184   CTCCTTTTTATATCA                GCCCG TTA CCGGC                GGAACATCACACCGG  48 18
JC861_RS20215 4220734 .. 4220746 -  -6.2  -3.90318   CCACTACCGGAGAAA                CCGG TCGTG CCGG                TTAAACCCGCAGAGC  65 309
JC861_RS20200 NONE
        secB NONE
        gpsA NONE
        cysE 4215437 .. 4215452 -    -9  -5.76633   TCAGACACAAAAAAA              GACAGC CTTA GCTGTC               TTTTTTACTTTTGGC 100 56
JC861_RS20985 4210922 .. 4210964 -  -7.9  -2.84841   GTTCAAGAAAACTCA CTTGTCGACTCAGCAATAAC ATTG GTTATTGCTGAAACCAC-AG TTTTAATATCTATGC  61 316
JC861_RS20125 4204465 .. 4204480 - -10.4  -6.02914   TTCAGATAAAAAAAA              GCCCCT CGAG AGGGGC               TGTAAAAGACAGGGA 100 141
        pfkA 4198346 .. 4198372 - -12.4  -3.65828   ATATAAAGGGGTAAA         TTGCCAGCTGAT GTT ATCAGCCAGCAA         ACCGTATCACGCTGG 100 270
JC861_RS20100 4195017 .. 4195050 - -12.5  -2.91144   GGACGCCTGAAAGCA     GCAATGTGCGGGGTA TCAT TACTCCGCACATTGT      ATCGTAACTCGTTTT  93 91
JC861_RS20085 4192906 .. 4192918 -  -5.5  -3.39772   GGAAATGCGCAAACA                CCTGC GCC GCAAG                CCCGGTCATATCACC  54 93
        emrD 4190647 .. 4190664 - -12.7  -4.03586   TGCGAAACAGAACAA             CGGGCAC CGCG GTGCCCG              TTTTCTTATTATCGG 100 50
        zapB 4184656 .. 4184672 - -13.7  -4.86133   CACAGACAGCAAAAA              GGGCGGA ATA TCCGCCC              TTTTGTCGTTATGAC 100 223
        rpmE 4175944 .. 4175972 -  -7.6  -5.77988   ACAGACATAAAAAAA       CGCCCTG--TGAAA TAT TTTCATTCAGGGCG       TTTTTTATGGAACAG 100 65
        metB NONE
JC861_RS19995 4171500 .. 4171532 -   -18  -3.33885   AAGTGAAAGTAGTAA      CGGGATGCAATTAA ATCCG TTAATTGCATCCCG      CCGGGATTGTTTCTG 100 277
         ppc 4168390 .. 4168411 -  -8.7  -5.40072   CTGCCGCCAAAAAAA           TGGCCGC AAATAAAG GCGGCCA            TCCGGGGTGAAAAAA 100 53
JC861_RS19985 4167911 .. 4167942 - -14.6  -5.24531   ACTTTTGATAAAAAA      TACGGGTTACACAC TGTC GTCTGTAACCCGTA       TCAAAAGACGATATC 100 42
JC861_RS19980 4167133 .. 4167145 -  -9.1  -2.87931   GTTATTGTTCACACA                GACCG TGG CGGTC                AGTATTGCTCAGCAG  65 325
JC861_RS19970 4165832 .. 4165856 -  -3.5  -4.02021   AAGCAATGAAGGAAA          GACCGAAAC TATATAT GTTACGGCC          TTTTCAGTACTTAAC  58 82
JC861_RS19965 4165005 .. 4165034 - -10.8  -3.16154   TAACACCACACTCAA       TAAAGCCCCTGT GATTTT ACCGGGGCTTTA        CAACAATATCTGTCA  79 38
        argC NONE
        argB 4158602 .. 4158616 -  -2.8  -3.30159   CCAATGTGCTGATAA               TCCG GATTACG CGGA               AATCCGCGTGCCGAT  46 17
JC861_RS19935 NONE
        argH 4155807 .. 4155840 - -15.4  -4.71223   TGACAATACATAAAA     CCCCGGATCACG GGAAACAGAA CGTGATCCGGGG      ACAATGCATTATGTT 100 39
JC861_RS19920 4154558 .. 4154576 - -12.4  -3.52906   TGATCCTGATAAAGA             CGGGCTGC CCG GCAGCCCA             CTCTGTTATTTTGTA 100 49
JC861_RS19915 4153250 .. 4153261 -    -3  -2.87377   ATAGATAAAATCAAT                TGAT AACT ATCA                 TAACGCAACTGCATT  43 91
        oxyR 4152196 .. 4152240 -  -3.6  -4.22009   ATTATGGAACAGAAA GGTGAAGGTAATACCATCGA TTATT TCGTCAATACCACCTTCAAC TACCCGACCATGGCC  62 85
        fabR NONE
JC861_RS19895 4149597 .. 4149618 - -10.9  -5.72616   ACGGATACAAAAAAA           CCGGTCACT TCAG AGTAACCGG            TTTTTTCATATTCTT 100 51
        btuB NONE
        murI 4141509 .. 4141519 -  -2.6  -2.95204   TGATGCTCAAAGAAT                 TAAA CTG TTTA                 CTGCTGCTTATTTCT  43 369
JC861_RS19850 NONE
JC861_RS19845 4139764 .. 4139775 -  -2.2   -3.6682   GTTTACTGACGTAAA                CGAGC GGA GC-CG                CAACGCAGTATCAGT  49 47
JC861_RS19840 4139540 .. 4139577 -  -9.3  -3.56837   TGTTAAAGAGCATAA   TAATTCACAGCATACCG TTTC CGGTAAACTCTGAATTA    TTGTTCAGATATCAG  76 45
JC861_RS19835 4136359 .. 4136369 -  -6.8  -4.27316   TCTCTCAACTCAAAA                 CACC TTC GGTG                 TTGTCAGGTTAAGCC  74 30
         rrf 4136117 .. 4136134 -  -7.7  -4.79223   CCATATCAGCAAAAA             TCTGCGC TTTT GCACAGA              CTTTAAATAATAACC  91 38
JC861_RS19825 NONE
         rrf 4135853 .. 4135870 - -11.3  -5.24449   GAGAAATGCAAAAAA             GCCACTC AGAT GAGTGGC              TTTCTTTAAATATAA 100 42
        murB NONE
        birA 4133724 .. 4133745 - -13.1  -4.56597   TTTTTCTGTTAAAAA           TAAACCGGC TCAG GCCGGTTTA            TTTTTTGAATCCACA 100 13
JC861_RS19800 4132299 .. 4132312 -  -6.7  -3.63968   TTCCAAATTGTTAAA               TGGTG CCGG CACCA                AGAGTCGAACTCGGG  65 12
JC861_RS19795 4132159 .. 4132174 -  -3.3  -2.77182   TTTTACATCGAAGGA              GTGTT GAGTAA AACAC               CAAGGATAATAATTC  43 49
JC861_RS19790 4132004 .. 4132014 -  -3.2  -2.56596   CGCTCTACCAACTGA                 GCTA TAT CAGC                 ACATCTTGGAGCGGG  42 32
JC861_RS19785 4131875 .. 4131890 -  -7.6  -2.57468   TTTCACCACATCAAC              CAAGCA GTGT TGCTTG               TCTGGATATTTACAG  60 74
         bfd 4130243 .. 4130253 -  -5.4  -4.55209   GACACAGGAAATAAA                 TCAC GGA GTGA                 TTACAGTGACAAAAT  70 84
         bfr 4129649 .. 4129673 -   -10  -5.86976   TCAGAAAAGAAAAAA         CCGCC-GC-GGG TTT CCCTGCCGGCGG         TTATGCACATTGCTT 100 64
        rpsJ NONE
        rplC NONE
        rplD NONE
        rplW 4127453 .. 4127464 -    -3  -3.12668   TAGGTTTACATTTAA                CAAT TGCC ATTG                 TTCTTTACTCCTCCG  46 43
        rplB NONE
        rpsS NONE
        rplV NONE
        rpsC NONE
        rplP NONE
        rpmC NONE
        rpsQ 4124360 .. 4124386 -   -11  -5.72616   ATGGATAGAAAAAAA         TAAACGGCTC TAAAGCC GAGCCGTTTA         TTCTACATCAGAAAG 100 49
        rplN NONE
        rplX NONE
        rplE NONE
        rpsN 4122655 .. 4122669 -  -2.8  -3.08679   TCCCGTGATTCAATA               TGGTGA CAA TTACCA               GCTAGCTTTCTTAAG  44 20
        rpsH 4122240 .. 4122251 -  -4.4  -2.70932   TTTCCTCCCGAATTA                TGCT ACGT AGCA                 GAGAATCTCGCCACC  45 11
        rplF NONE
        rplR NONE
        rpsE NONE
        rpmD NONE
        rplO NONE
        secY NONE
        rpmJ 4118640 .. 4118669 - -14.5  -4.84359   CCACGTTTATAAAAA       GATTG-GCTGGCTA ATT TAGCCAGCTCAATC       CAACTTTGCAAGAAA 100 54
        rpsM NONE
        rpsK NONE
        rpsD NONE
        rpoA NONE
        rplQ 4115658 .. 4115674 - -12.3  -6.02919   GCAGAAATAAAAAAA              CCGGGTT AAA AACCCGG              TTTTTTTACGCAGTA 100 46
        zntR NONE
JC861_RS19620 4114460 .. 4114472 -  -4.9  -2.70268   GGGTAAGGAAAAAGG                TATGA GCT TCATA                AAAGAGTTTCGTGAA  46 426
        dprA NONE
JC861_RS19585 NONE
        tsaC NONE
        aroE NONE
JC861_RS19570 4106119 .. 4106133 -  -4.3  -3.33744   TCTGCCGGCAAAAAC               GTCAT GATCG ATGAC               TCTTCTGTCATTATC  51 478
JC861_RS19560 4105605 .. 4105615 -  -2.6  -2.95204   TGATGCTCAAAGAAT                 TAAA CTG TTTA                 CTGCTGCTTATTTCT  43 221
JC861_RS19555 4103964 .. 4103980 -  -2.1  -2.92157   GACGAAGGGGACATA              TGTCAGC TTC GCAGACG              CTCTCTGCTCATTTT  42 86
JC861_RS19550 4103819 .. 4103849 -  -7.1   -2.7362   GTTAAAGAGCATAAT      TG-TTAAGCTGACT CTTG AATCAGCTTAATCA       TTATTTGCAGATGAC  59 61
JC861_RS19545 4100638 .. 4100648 -  -6.8  -4.27316   TCTCTCAACTCAAAA                 CACC TTC GGTG                 TTGTCAGGTTAAGCC  74 30
         rrf 4100369 .. 4100379 -  -2.4  -2.80398   TAACCAACTGAACTA                 CCGC TCC GCGT                 ATCTCTGTGTGACTG  41 72
JC861_RS19535 NONE
JC861_RS19530 4100153 .. 4100173 -  -9.7  -5.60689   TCAGACAATAAAAAA            CCCAGTTCA TAA CGAACCGGG            CTATTAATAAATAAA 100 69
JC861_RS19520 4098721 .. 4098736 - -10.4  -3.92659   TCCTGAAAAGCGAAA              GGGGCA CGAA TGCCCC               TTTTAACTTATTATT  89 51
        ilvL 4096547 .. 4096568 - -12.9  -6.10489   AAGGCTAAAAAAAAA           CCCCGCGCC TTTC GGTGCGGGG            TTCTCGTGAGATCCT 100 49
        ilvG NONE
        ilvM NONE
        ilvE 4093582 .. 4093603 -   -13  -3.33744   CGTGTTTGCAAAAAT           CAGGCGGG GAACGA CCCGCCTG            TAAATCTGTTTCGTT 100 42
        ilvD NONE
        ilvA 4090098 .. 4090114 -  -9.4  -3.70773   CTGCACACTGAACAA              GCGGCT GCATG AGCCGC              TGATCAGAGCATTCT  73 46
JC861_RS19470 4086832 .. 4086844 -  -6.2  -4.30576   CCGCTATGATTAAAA                CGGG TGCTG CCCG                CTGATACTGTAACCG  72 7
         rep 4083372 .. 4083405 -  -2.5  -3.92996   GCTGACAGATAATAA     GCCCTGATTAT CAGTTTTCGGAC ATTATCAGGGC      TTTAATTTTATGAGC  54 97
        trxA 4079683 .. 4079702 -  -8.6  -3.42069   TGAACGTGAATAATA            CGGTAACG TTAT CGTTACCA             GGTTAATTTTTTACA  71 426
         rho 4078326 .. 4078344 -  -8.1  -6.07627   ACCGGTAAAAAAAAA             CGCCACA ATATA TGCGGCG             TCAGTCATAAAGTGT 100 51
        wecA NONE
        wzzE 4075968 .. 4075993 -  -9.6  -4.08216   TTACCCGCCTTAAAA         CAGGCCGGGA ACAGCG CCCCGGCCGG          TTATTCTGCCGCTGC  85 44
        wecB NONE
        wecC NONE
        rffG NONE
        rfbA NONE
        rffC NONE
        rffA NONE
        wzxE NONE
JC861_RS19390 NONE
        wzyE NONE
        rffM 4065250 .. 4065266 -  -2.2  -4.56775   ATTTCCCCGCAAAAA             GCCGCCC GGAC AGG-GGC              AATTATAATTTATTA  60 28
JC861_RS19375 4065046 .. 4065059 -  -2.3  -3.39327   CTCTTACACGCATAA               TGGCG CGCC CGACA                GGATTCGAACCTGAG  45 12
JC861_RS19370 NONE
JC861_RS19365 NONE
JC861_RS19360 4064643 .. 4064675 - -17.1  -3.95219   CGGAAACCGCAGAAA      CGAAAAAGCCCCGCT GTA AGCGGGGCTTTCTCT      GAATATGGTCGGCGA 100 31
JC861_RS19335 4056337 .. 4056354 -  -9.1  -2.62184   TGCCGTCGCATATCA             GCCG-CGG TGC CCGGCGGC             CTGATACTGTAACGG  66 5
JC861_RS19325 4055689 .. 4055702 -  -5.2  -3.14931   TTTACGCCTCAGTAA               CCGG GGTTAT CCGG                CGGTCATTTTTGCGT  53 29
        dapF 4054842 .. 4054857 -  -4.7  -3.80573   TTTATGATGATTAAA              GATGG ATAACA CCATC               ATATACATGCGTGGC  59 5
JC861_RS19315 NONE
        xerC NONE
        yigB 4052424 .. 4052447 -  -8.2  -2.95994   CGAAAGAAAAAGCGA          CTTCCGGA CAGCCGGT TCCGGAAG           AACTGGTTTTTTATA  65 50
        uvrD 4050168 .. 4050200 -  -9.9   -4.8048   TGCGCAGATGAAAAA      GGGTGTCAACCGG TTATTCT CCGGTTAACACCT      TACTCTGCGGAAGAT 100 40
        corA 4048925 .. 4048937 -  -3.3  -4.89567   TGGCAAAATACAAAA                CCGCC CTC GGCAA                AGCTCAGGCACGGCT  74 240
        recQ NONE
        pldB 4044444 .. 4044458 -    -5   -2.6296   TAAATCTGAAGCAAC               CACATG ATA CATATG               CAAATTCCTGAAAAT  48 44
        yigL 4043602 .. 4043626 -    -7  -5.95539   TCTGAAAGAAAAAAA          CCGCTGGAAG AATAA CATCCGGCGG          CTTTCTGTTGATCTG 100 51
         orn 4035928 .. 4035938 -  -6.8  -3.79419   TTCTGCTATAAAATA                 CGCA ACC TGCG                 TTAATATTAACCTGT  67 71
JC861_RS19235 4035666 .. 4035680 -  -4.2  -3.40522   ATTCCCGCATCACAA               CCGGTA TAT TACCTG               ACAAACTGAAAATTG  51 39
JC861_RS19230 4035556 .. 4035569 -  -2.3  -3.28791   ATTCCCGCGTCACAA               CCGGT ATAT ACCTG                ACAATCTGAAAATTG  45 39
JC861_RS19225 4035185 .. 4035197 -  -7.7  -3.62046   TCACTGTCTGAATAA                TCACC GCT GGTGA                TCGTTCATCTGCCCC  70 301
        tsaE NONE
JC861_RS19210 NONE
        mutL NONE
        miaA 4028732 .. 4028742 -  -6.8  -4.05788   GTTTTTTAAATGAAA                 CCCA AAC TGGG                 TTCGAAAAATAACTA  69 84
         hfq 4028322 .. 4028368 - -11.9  -3.94812   GCTGAGTGAAAAACA CGCAGGAAAAAACACAGGTAAAG TCT CCCTACCTATGT-TTTTCC-GCG ATTGATAACTGCACA 100 46
        hflX 4026967 .. 4026980 -  -2.3  -3.04144   TTTTCAGGGCTAAGA               GCACA AAAA CGCGC                TCTCAATCAATATAT  42 55
        hflK NONE
        hflC 4024542 .. 4024565 - -13.2  -3.31461   GATCTATGTCCATAA          TAAAGCCCGC CTAA GCGGGCTCTA           TTCATCAGAGTGCGA 100 90
JC861_RS19175 4023095 .. 4023114 - -11.4  -5.54907   GTCAGAAAACAAAAA            GCCGGACA AACA TGCCCGGC             CCTGACTGGTATCAA 100 51
        nsrR NONE
         rnr 4019990 .. 4020019 - -15.1  -3.78934   GTTGCGGGACAATAA       GCGTAATGAGGCG TTAC CGCCTCATTACGG        GAAGATATAAACCAA 100 47
        rlmB NONE
        rpsF NONE
        priB NONE
        rpsR 4018112 .. 4018138 -    -3  -2.72511   CTTATCCTCTTAAAG         TCATTAATGGAC TGT GCCGATTACTGA         TGACGATCAGTGTAA  42 19
        rplI 4017594 .. 4017611 - -12.7  -5.71712   TGTCACATAAAAAAA             CGCTGGC CTGA GCCAGCG              TCTTTCAAAGATGTT 100 58
JC861_RS19130 4016070 .. 4016089 - -13.6  -5.42975   GTATAGAAATAAAAA            TGGCCGGT GAAA ACCGGCCA             TTTCGCATATTCTGT 100 61
        cysQ 4015188 .. 4015225 - -11.5  -4.42386   TCCGGACGGAGAAAA   GCCAGTGTAATTTGCAT AACC ATGCAAATTACACTGTT    ATTCAGGAATAAAAT 100 46
JC861_RS19120 4014552 .. 4014568 - -10.9  -2.60904   CGATAACTACAAGAT              TGACCAG CTG CTGGTCA              CACGTATTGCGGATA  69 165
JC861_RS19105 NONE
JC861_RS19100 NONE
JC861_RS19095 4006349 .. 4006366 - -11.3  -6.06529   CAGAGACAAAAAAAA             CCGCTGT TTTC ACAGCGG              TTTTTTTATTCACAG 100 46
         mpl 4003082 .. 4003107 - -16.1  -5.04175   TTAATCATACAAAAA         CCGCGCGGTAC TGAT GTCCCGCGCGG          TTTTTTTTTCTTAGT 100 78
         mdh 4001131 .. 4001166 - -13.6  -4.90455   ATATAGTTATAAAAA    CAATAAAACCGCTAAT CATA ATTAGCGGTTTTATTT     ACGGCTCAAAAAAAT 100 61
JC861_RS19060 3999851 .. 3999870 - -12.2  -5.43414   ATCACAGAGAAAAAA            CGGGATCT GTAA AGATCCCG             TTTTTTTATTCCGGT 100 31
        rplU NONE
        rpmA 3997965 .. 3997987 - -16.4  -4.99035   TTACGCATATAAAAA           GCCCTGCAAA AGG TTTGCAGGGC           TTTCGGACTCGGTTA 100 54
        cgtA 3996668 .. 3996695 - -16.4  -5.64274   TCATCCATAAAAAAA        CCCGATAGTCGG GTAA CCAACTATCGGG         TTTTTATTCAGAACT 100 48
JC861_RS19035 NONE
JC861_RS19030 3994662 .. 3994675 -  -3.9  -3.17763   TGGACATTTGATTAA               CTTTA AAGT TAAAG                TTGAAATCAGAACGT  48 463
        greA 3991993 .. 3992037 - -14.4  -5.65177   ATATTTATAAAAAAA TGCCACCGG-CAGATGATTTC TGAT GATATCGTCCGGCCGGTGGCA TTCCTTTCAGATTTT 100 158
        rlmE 3990879 .. 3990889 -  -3.2  -3.11738   GTGTTAACAAATAAC                 GCAC AGG GTAC                 TACACTTTCCACCCT  46 25
        ftsH 3988833 .. 3988853 - -14.7  -5.82281   AAAGATATAAAAAAA            CCCGGCAGA TTT TCCGCCGGG            TTTTTCATATTACTG 100 63
        folP NONE
        glmM 3986442 .. 3986453 -  -3.6  -4.58308   TACTAACCAAACAAA                CGCG GACA CGCA                 AGTCTATTTTAAGCC  67 147
        secG 3985993 .. 3986010 -  -4.1  -2.78371   CAGACTTGCAACAAT             CAGCG CGGAATAT CGCTG              TTAGGAGCTGCTGGT  46 7
JC861_RS18985 3985772 .. 3985787 -  -2.6  -3.53091   ATCCCGCGTTCGAAA              CGT-GAA AAA TTCTACG              CTGATCACCTGCAAA  48 60
JC861_RS18980 3985557 .. 3985572 - -10.4  -5.56673   ACTGATAACAAAAAA              CCCCGA AATT TCGGGG               CTTTATGCAACTGGA 100 141
        rimP NONE
        nusA NONE
        infB 3980717 .. 3980739 - -13.4  -3.04398   TTCTCTCCTGAAAAT           TCGGGGGGCC ATA AGCCCCCCAA           TTATATCATGTTATG 100 57
        rbfA NONE
        truB NONE
        rpsO 3978911 .. 3978935 - -16.5  -3.35996   CAGCCGCATTCAGAA          GAAAAGGGGCC GTC GGCCCCTTTCC          ACTGAAACTTGTCTG 100 43
         pnp NONE
        nlpI 3975505 .. 3975532 -  -4.8  -5.28166   TAAAACGAACAAAAA        TCCCCCCATCAC TTCC GCGATGGTGAAA         AATTAACGGGTTGAA  82 54
JC861_RS18930 3973405 .. 3973431 - -17.2  -5.61596   AGGCGTATAAAAAAA         GCCCGGCAGGGA TAT CCCCGGCCGGGC         TTTTTATGATTCAGA 100 48
JC861_RS18915 NONE
JC861_RS18910 NONE
JC861_RS18905 3967362 .. 3967380 - -10.3  -5.41143   TACCGGCCAAAAAAA             TCCCGTG ACAGG CACGGGA             TTTCATTTATTTTAG 100 37
JC861_RS18900 3966217 .. 3966235 -  -8.8  -2.62616   CCACCTCCCATATTA             TGGCCGGA ACT TCCGGCTA             CAGTATTACCGATGA  59 47
JC861_RS18890 3964663 .. 3964685 - -14.8  -3.84523   AGTAACAGAACAGAA           CGGGCGCGAT ATA AGCGCGCCCG           TTATCCGGCTTTATT 100 36
JC861_RS18870 NONE
JC861_RS18865 3960949 .. 3960975 - -13.8  -5.74288   ACAAAGAAGAAAAAA         GAAAAGCTGGTC AGT GACCAGCCTTCC         GATTTGACGACATAC 100 55
JC861_RS18855 3960095 .. 3960130 - -11.3  -4.64676   GTACCCCCAATAAAA    CCA-CACCGGCTGATA GAGTA TATCATCCGGTGCTGG    TTCAGACAGTCCCGT 100 75
JC861_RS18850 3959277 .. 3959320 -  -6.6  -3.28712   CCGCGGCTGTTATAA CCAGAGCACATGGCGCA-CGG ATT CCGGTGTGCCGTATACCCGGG AGCTGGAAGATAAAA  59 326
JC861_RS18830 3954542 .. 3954555 -  -8.1  -2.82519   TTAGTAGAGCAATCA               GCAGC AGCG GCTGC                ATCACTTGAAGTGCA  61 270
        rraB 3948889 .. 3948902 -  -8.1  -5.71712   GCGGACACAAAAAAA               CCTGC CGCG GCAGG                TTTTTCAGTCATGGC 100 47
        lptF 3939866 .. 3939881 -  -4.7  -3.39732   CAAGTACTTTAAACA              TCAGG CAACCC CCTGA               ACACGGGCAGAGCCA  53 10
        lptG 3938725 .. 3938761 - -16.8  -3.53224   TACCGGCCGCTGAAA   TGACAGAGCCGGTCAGC ATTC ACTGACCGGCTCTGT-A    TACCGGGATCTGTTT 100 48
JC861_RS18740 NONE
JC861_RS18735 3934870 .. 3934900 - -17.7   -3.1247   ATCTGTGATACTTAA       GAACATGCCCGCA TCAGG CGCGGGCATGTTC       TGTATATGAAGTGTC 100 8
JC861_RS18725 3933128 .. 3933143 -  -6.8  -5.64274   TCAGGCACAAAAAAA              GCCACC TTGC GGTAGC               TTGATTTCACTTAAG 100 43
JC861_RS18715 3930348 .. 3930381 -  -7.6  -3.14683   ATATTTTTCTATTAA     CTATCTGATGATAA TTGCTG TTCTCACCAGATAG      TCAATACGTTTCATC  63 89
JC861_RS18650 3916961 .. 3916988 - -15.6  -2.75865   CCGTAAAATAATTTA        CCGGCGGTATCC GGCC GGATACCGCCGT         TTTTCCGGGATAACT 100 40
JC861_RS18640 NONE
JC861_RS18635 3912448 .. 3912484 - -15.3  -5.60993   CCGGCGATAAAAAAA    CAGAAGCCCGGCA ACGTTATTTTG TGCCGGGCTTCTG    CGCTGTTTTTTCTGA 100 52
JC861_RS18630 NONE
JC861_RS18625 3911350 .. 3911364 -    -5   -3.2496   TAAGCCATAATTTAA               TTCCTG TAA CAAGAA               TGAACTATCAGGATT  53 33
JC861_RS18620 NONE
JC861_RS18615 NONE
         fba 3907955 .. 3907990 - -14.8  -3.07113   GATTACCTGACCCAA    TCCC-CGGTGACCGCCT GAA AGGCGGCCACCACAGGA    TCTGACTGTTCAGAG 100 35
JC861_RS18565 NONE
JC861_RS18560 NONE
JC861_RS18555 3896576 .. 3896591 - -11.8  -5.82281   AAAGAGATAAAAAAA              GGCCCG TTTC CGGGCC               TTCAGGGGGATGATC 100 39
JC861_RS18550 3895580 .. 3895594 -  -7.1  -4.59109   GATATCCGCTAAAAA               GACCC TCTGC GGGTC               TTTTTTAGTCTTCTT  81 30
JC861_RS18540 NONE
JC861_RS18530 3891503 .. 3891521 -   -16  -4.32034   TCATCATTATGAAAA             TGCCCGGC ACA GCCGGGCA             TTTTTTGACTTATTT 100 35
JC861_RS18510 3887453 .. 3887487 - -13.9   -3.0682   TTTATCAGACAGATA    CA-AAAAAAAGCGCCT TTGA AGGCGCTTTTTTTATG     TCCGCAGTTTTTTCA 100 21
        narX 3875768 .. 3875782 -  -2.8  -2.65476   ATCACTGAGTATAAT               CTCTCC GGC AGAAAG               TATTCTGTTCGTCAT  41 44
        narL NONE
JC861_RS18470 3874266 .. 3874291 - -13.3  -5.31519   ACAGTTAAATAAAAA         CACCGGCCTGT CGGA AGAGGCCGGTG          TAATACAGATGAAAT 100 47
JC861_RS18465 3873169 .. 3873179 -  -5.4  -3.76186   TATTTATAAAATTAA                 CTCT TAC AGAG                 AGAAATTACAGGTTT  61 180
JC861_RS18460 3872572 .. 3872594 -  -4.1   -4.7153   AAATAACTGCAAAAA           GAGCAACAG ATATG CCGTTACCC           TCTTTGTTTTTGAGT  68 98
JC861_RS18455 3866002 .. 3866040 - -14.1  -3.61001   CCTTATAAAAACAGA  GCTGAATTGCCGGTA-CA ATAT TGATACCGGCAATTCAGT   AACGGATTAATTGGT 100 32
JC861_RS18450 3864679 .. 3864690 -    -3  -4.41047   ATTTGTTAACCAAAA                TTCA AACC TGAA                 ACACCGTGAATTACT  61 345
JC861_RS18445 3854168 .. 3854197 - -11.5  -4.80453   TTATCACAAAATAAA       GAAGCCACAGACA TTTC TGCCTGTGGCTTT        TATTATTGTTACTGA 100 60
JC861_RS18440 3852623 .. 3852641 -  -8.8  -3.61654   CAGATCCATCGGAAA             CGGCATAC CCC GTCTGCCG             GATAAAAAACGATTC  75 365
JC861_RS20945 NONE
JC861_RS18430 3851979 .. 3851998 -    -5  -4.01088   CATATGAAAATACAA            TTCCCTCC CGGA AGAGAGAA             TAACTATCAGTACGC  61 100
JC861_RS18425 NONE
JC861_RS18420 3851017 .. 3851037 -  -5.4  -5.73978   ATCATAAACAAAAAA            GGCTTGCA GTCAA CACAAGCC            TTTTTAATATCCGTT  91 46
JC861_RS18410 NONE
JC861_RS20940 NONE
        yidZ 3847970 .. 3847989 - -13.6  -3.64703   GTTGTTGTACCCAAA            GGCATCCG GGGG CGGATGCC             TTTTTTTATTTCCCG 100 31
        potA NONE
        potB NONE
        potC 3842526 .. 3842553 -   -12   -4.7878   TATTCACAAAATAAA        CCGGCG-GGCC GCTGTAA GGCCGCGCCGG        TAACAGAAAGGTTAC 100 37
        potD 3841269 .. 3841284 -    -9  -5.64274   GCAGGCATAAAAAAA              GCACCT CTGA AGGTGC               TTTTTATTGATACGT 100 45
JC861_RS18370 3839224 .. 3839235 -  -7.2  -3.73302   GAACAGATGTAACAA                CCGG AAAG CCGG                 AAATCATACATAATA  66 456
JC861_RS18330 NONE
        sctC NONE
        sctW 3832077 .. 3832088 -  -4.4  -2.79312   AAAGTTGTCAGCATA                GCAA TCCA TTGC                 CGTAAAAGTTATAAG  46 34
JC861_RS18315 NONE
JC861_RS18310 NONE
        sctN NONE
JC861_RS18300 3827843 .. 3827853 -  -8.2  -4.95806   AAATTATCACAAAAA                 CCGG ATG CCGG                 TTTACTGCAATAAGA 100 85
JC861_RS18295 NONE
JC861_RS18290 3825377 .. 3825390 -  -3.9  -3.86015   TATCCGCCGCATAAA               TAACA TCCA TGTTA                AATATCCATAAGTTC  56 23
        sctS NONE
        sctT NONE
JC861_RS18275 3823235 .. 3823252 -  -4.9  -2.52834   TATCCGATTATCAAG             TCAGACA ATAC TATCTGA              TTGCACTGATAATCA  47 83
JC861_RS18270 NONE
JC861_RS18265 NONE
        sctE NONE
JC861_RS18255 3818816 .. 3818833 -  -8.4  -5.88476   AAAATAAAGAAAAAA             GCCGCT GTCGGA AGCGGC              TTTGATTCATGGAAG 100 51
JC861_RS18250 NONE
JC861_RS18245 3816133 .. 3816172 - -16.4  -3.19018   AAGACGGCAAGTGAA  GGGGCACGGGGAGCATAC ACCA GTATGTGACCCGTGCCCC   TGAGTGCGGCCAACG 100 389
JC861_RS18240 3815364 .. 3815385 - -11.7   -4.6955   GATTAATACAGAAAA           GGGATAACT GAAC AGTTATCCC            TTTTTATTTATTTGA 100 33
        soxR NONE
JC861_RS18220 3809402 .. 3809421 -   -10   -2.8547   AGGCGTCAGATCACA            CTCCCGGCG GTT CGC-GGGAG            ACACTGTTGCGTTCC  72 1
JC861_RS18215 3808392 .. 3808413 - -10.2  -5.61881   TGTTAAAAATAAAAA           CAGGCTGA GTAATA TCAGCCTG            TTTTTATATTGAAGG 100 69
JC861_RS18210 NONE
JC861_RS18205 3805621 .. 3805640 - -16.4  -5.28778   ATTATGCATAAAAAA            CGCCCCCG TTAC CGGGGGCG             CTGTCTGTTTTATAT 100 71
JC861_RS18200 3805042 .. 3805083 - -16.1   -2.6914   GATGCCGCATACAAT GCCGCATACAATCCCGCATA AAT TATGCGGGATTGT-TACCGC TTACGGCGAAGGCAG 100 26
        gntR 3797239 .. 3797274 -    -4  -4.29106   TTTCAGATGAATAAA    TTGTGACAGTTATCTC AAAC GAAATTCCTGTCACAT     CAGGAGGGGCCGGGA  63 45
        gntK NONE
        gntU 3795200 .. 3795226 - -14.5  -5.28176   GGGAGTGATAAAAAA         GGCAGCGGATC TTATC AATCCGCTGCC         TGAGAATGAAAATGC 100 46
JC861_RS18150 3793535 .. 3793575 - -11.8  -4.61482   GGCTGCAAAAAATAA CCGCCCGGCATCTCCG-CA TTAT TGTCGGTGATGCCGCGGGG  GTGGATTCAGCCGTT 100 466
JC861_RS18120 3788260 .. 3788277 -  -9.9  -4.35461   GTAATATTATCAAAA             GCACTGT TTTT ACAGTGC              TTTTTTGTTTTTTGA  93 52
JC861_RS18095 3780336 .. 3780351 -    -9  -3.40403   TCCTGGTTATGAGAA              GAGTGC CACC GCACTC               TATAACGCACTGGAA  71 106
JC861_RS18045 3768824 .. 3768845 -  -4.4  -3.67597   CCGTTTACTGAAGAA           TGCCGG CTATCTTCCC CCGGCA            TTACTGGCCCGGCAG  55 233
JC861_RS20930 3765914 .. 3765935 -  -5.1  -3.17051   TGTTCAGCAGCAATA           CCTTTCTGC CCCA GCAGCAAAG            ATGCGCCTTTAGCGT  53 68
JC861_RS18035 NONE
JC861_RS20925 3760113 .. 3760136 - -16.8  -5.96219   TATTGATAAAAAAAA          TCCCCCTGTG GCAA CACAGGGGGA           TTTTTATCTCAGCGG 100 47
JC861_RS18025 3756853 .. 3756865 -  -3.3  -3.46709   ATAAAACGGGAAATA                CGGTG TTT CATCG                GACTTTTTCCAGTTC  49 20
JC861_RS18020 NONE
JC861_RS18015 3753564 .. 3753588 -   -13  -5.88476   AAAATAAAGAAAAAA          GCCGGTTTAT TTTTC ATAAACCGGC          TTACGGAAGACAATG 100 57
JC861_RS18010 3752024 .. 3752039 - -10.4  -5.76633   TCAGATATAAAAAAA              GGAGGC TTTC GCCTCC               TTCTTCATTATACGC 100 54
JC861_RS17995 3748727 .. 3748754 - -13.6  -3.19837   CACACAACTGAAAAG        CGATACAGTTCA TCCC TGAACTGTACCG         GCATTAATTACTGAT 100 33
JC861_RS17990 NONE
JC861_RS17985 NONE
JC861_RS17980 NONE
JC861_RS17975 NONE
JC861_RS17970 NONE
JC861_RS17965 NONE
JC861_RS17960 NONE
JC861_RS17955 NONE
JC861_RS17950 3740968 .. 3740983 -  -6.2  -4.02534   ACTGAAATGTATAAA              TTTACC GGGT GGTAAA               AATTGATTTGGCGGA  67 319
JC861_RS17945 NONE
JC861_RS17940 NONE
JC861_RS17935 NONE
JC861_RS17930 NONE
JC861_RS17925 NONE
JC861_RS17920 3735325 .. 3735335 -  -5.4  -2.93853   CCCGGCTAATTAAAG                 CTCA TAA TGAG                 TGCGGCATGAGAATA  52 5
JC861_RS17915 NONE
JC861_RS20920 NONE
JC861_RS20915 3733604 .. 3733622 -  -4.5  -3.53012   TTTCTTTCCCGCAAA             GGCGG CCGTTTATC CCGCC             AGCAGATATTCCGTA  53 241
JC861_RS17900 3732503 .. 3732552 - -10.2  -3.48593   GATTTTCTGACATAA GATTGCTGACAAAATCCCGG CCTGTTTTTT CCCGGACTTTGCCAACAATC TGAGGCTCCGCCATA  80 59
        nikA 3730170 .. 3730184 -  -3.4  -3.38435   CGCCGGAAAATAAAT               CGCATC ATA GTCGCG               GGCCTGTCACTTGGC  47 32
        nikB 3729243 .. 3729256 -  -4.5  -3.08798   ATCGCTCATTCAATA               CCCTC CGCA GAGAG                GCGGATACGGGGGTC  51 2
        nikC NONE
        nikD NONE
        nikE 3726748 .. 3726770 -  -7.6  -4.41797   AAAATGAGAGTAAAA           GCGCCCTGCT GAT ATCACGGCGC           TTTTTTCTGTACTAT  82 43
JC861_RS17855 3721554 .. 3721584 - -18.5  -5.36441   GCCGGACACAAAAAA       GCCGTGATAACAG AATCG CTGTTATCACGGC       CGGAAATCTTATTTA 100 44
JC861_RS17840 3715849 .. 3715864 -    -4  -3.28791   AGTGTTTGTTCATAA              TCTCAG TTCC CTGAAA               ATCGGGTAATCATCC  51 53
JC861_RS17835 NONE
JC861_RS20910 3707766 .. 3707779 -  -3.8  -2.91735   TCAACACGCGACACA               TCGC TTTAAT GCGA                AACTCTGCCTGATGT  46 60
JC861_RS17830 3706941 .. 3706953 -  -3.3  -3.04398   CTTCCCCTCCAAAAG                TGGAC ACA GTCCT                AAGCGAGGTTCTGGT  44 24
JC861_RS17825 NONE
JC861_RS17820 3706110 .. 3706159 -  -7.9  -2.83409   TAGGAAGCCACTATA CCCTCACTC-GCCAAGCCGGACA GTTGAT TATCCGGC-TGGCTGAGGGGGAG TGAGACTATTTCGAT  61 42
JC861_RS17815 3705152 .. 3705165 -  -5.9  -2.82516   CTCTGCATCATCAGA               CGGCA ACCA CGCCG                TAACCCGATACGGTA  53 428
JC861_RS20905 NONE
JC861_RS17800 3703010 .. 3703040 -  -8.6  -3.95787   TATTATATTTATAAA       TAACTATATGAT TTCATCT ATCATATAGTTA       TCCGTAGCCAATATA  77 60
JC861_RS17795 3702199 .. 3702221 -  -4.9  -4.50686   TTAAAAATGAAGAAA           CCAGAATAT TAAGG ATCTTCTGG           CTATGAACTAAAATG  68 33
JC861_RS17790 3700850 .. 3700885 - -12.6  -3.05463   ATCCCTGTCAGTCAA    CACGGGGATGTCTCCC GGCA GGAAAAAATCCCCGCG     CGGGTTAATAAAAGG  93 114
JC861_RS17785 3699776 .. 3699799 - -15.4  -2.79183   CTGAGTGTTATGATA          TCAGCGACAG GTTT CTGTCGCTGA           GGTCAGATATTCAAA 100 117
JC861_RS17780 3698352 .. 3698366 -  -7.8  -4.62441   TGCGACATAAATAAA               GACGAG ATA CCCGTC               TTATGTCACCGGTAA  86 225
JC861_RS17775 NONE
JC861_RS17770 3696529 .. 3696550 -  -8.8  -5.41746   AAGCTCTCAAAAAAA           CAGACTTG TTCGCG CAAGTCTG            TTTTTTTATGCGTGC 100 101
JC861_RS17745 NONE
JC861_RS17740 NONE
        groL 3689517 .. 3689562 -   -15   -3.1372   CATCCTTCATTAACA TACAAAAAAAGCCTGTAACC ACTTAA GGTTACAGGCTTTTTCAGCA AACAATTGCAGTCAG 100 50
JC861_RS17730 3688515 .. 3688526 -  -4.4  -2.91144   TCAGGTCTTAAATTA                TGAC CCGG GTCA                 CTTTAAGGCGATAAT  47 180
JC861_RS17725 NONE
JC861_RS17720 3685410 .. 3685438 - -13.2  -5.66684   TAATGCATAAAAAAA       CCGGCAC-CTGAG TTTC CTCAGAGCGCCGG        TTTATTTTTTCCTGT 100 55
JC861_RS17715 3684763 .. 3684784 -  -3.7  -5.80364   ATCTGAATAAAAAAA           CCACCAT TTATATCG ACGGTGG            TTTTTTTGTATCTGA  91 174
         efp 3682042 .. 3682062 - -18.3  -5.95946   TGAATAACAAAAAAA            CCGCCGCTG AAT CAGCGGCGG            TTTTGTAATTCATCA 100 48
JC861_RS17690 NONE
        hyfB NONE
JC861_RS17680 NONE
JC861_RS17675 3674992 .. 3675004 -  -2.6  -2.52464   CTCTCCCTTAACCGA                GCCA GATGA CGGC                GATAACACTTGAACA  41 5
        hyfE NONE
JC861_RS17665 NONE
JC861_RS17660 NONE
        hyfH NONE
JC861_RS17650 NONE
JC861_RS17645 NONE
        hycI 3668695 .. 3668714 -  -9.2  -5.64274   TTATCCATAAAAAAA            CCGCCGGA TTTC TGCGGCGG             TTTCTGTGATAGTCA 100 52
JC861_RS17625 3666449 .. 3666468 - -10.8  -4.66609   GACTTCATGTAAAAA            TACCGCAA TAAT TTGCGGTA             TTTTTTTATGTATCA 100 38
JC861_RS17605 NONE
JC861_RS17600 3661335 .. 3661364 - -12.1   -3.9644   GTCTGAAGAGAATAA       CGGTCAGTCCGCC TGCG GGCGGACTGACTT        GTGACGTTACAGTGT 100 32
        fdhF 3657691 .. 3657735 - -13.2   -4.9251   AACAAAAAATGAAAA TATAA-AAAAACCGGCGGTCA TTTC TGAGCGCCGGTTTTTATCATA TTATAACAGACGGAT 100 43
        hydN NONE
        hypA NONE
        hybG 3654191 .. 3654208 -  -9.9  -3.62176   AATAACAGCGTTAAA             CACCTGT CAGA ACAGGTG              TTTTTATCCGGAGAC  80 55
JC861_RS17565 3652489 .. 3652513 - -12.9  -4.82901   TGTCCGTTACAAAAA          GACCGGCTC CTGAAGT GAGCCGGTC          TTTTTTTTATCTGCT 100 42
        glpA NONE
        glpB NONE
        glpC 3644409 .. 3644422 -  -9.5  -5.71712   CTGTATATAAAAAAA               CCGGC CGGA GCCGG                TTGCTGTAATACCTT 100 44
JC861_RS17525 3643160 .. 3643178 -  -5.8   -3.1585   TCATTGAAGCCAACA             CCCTGCTC AGC GGGCTGGG             CTTTGAAAGTGCCGG  54 472
        tusA NONE
JC861_RS17505 3640250 .. 3640267 - -11.3  -4.19817   GTTACTGACTGAAAA             GGGATGC TGCG GCATCCC              TTTTTTTATCTCACC 100 31
JC861_RS17490 3636132 .. 3636181 -  -9.4  -4.15029   ACTGGAGACAAACAA CTGGCTCAGTC-CGGATGCAATG ATCTA CATTGAATCCGAGTCTGAATCAG ACACACTGGTTGTTC  82 441
        ftsY NONE
        ftsE NONE
        ftsX 3631437 .. 3631448 -  -5.8  -3.47541   TACAAATAAAAATGA                CGTC GGCA GACG                 GTAATGGTAAATAGT  59 159
        rpoH 3630512 .. 3630524 -  -6.3  -4.35644   ATTATCAGAAAATAA                TATGG CTA CCATA                GCAGATTGCGGCAGA  72 57
JC861_RS17455 NONE
JC861_RS17450 NONE
JC861_RS17445 NONE
JC861_RS17440 3626514 .. 3626530 - -15.1  -2.73875   TTGTCTGCAATATCA              CCGGGGC AAA GCCCCGG              CTGTTATTTTTCTCA 100 55
JC861_RS17430 3623926 .. 3623955 - -10.7  -3.24232   CTCCCCTGAAACACA       CTG-CCCGCATCAG TCA CCGCTGCGGGTCAG       TTCAGCGGTGATGAA  81 22
        livH 3622938 .. 3622954 -  -9.5  -3.07299   GACAGCACAAACAAG              GTTATCG TGG CGATAAC              GGCGTTGATCCAGTG  72 49
JC861_RS17415 3620861 .. 3620891 -    -9  -3.75153   GGCTGGTAATGGAAA      GCAGCGGCGCGAGG GATTT CCCCGC-CCGC-GC      TATAAATCAAAAGAG  78 48
JC861_RS17325 3613118 .. 3613134 -  -2.1    -2.914   GCTATGACACTAAAC              GTCCCGC ACG GTGGGAT              TTTTGGGGTACTTAA  42 504
JC861_RS17320 NONE
JC861_RS17315 NONE
JC861_RS17310 NONE
JC861_RS17305 NONE
JC861_RS17300 3608447 .. 3608462 -  -8.2  -5.64274   TCAGGCATAAAAAAA              CCCCGC GATT GCGAGG               TTTAGAATTTGTATA 100 124
JC861_RS17290 3606727 .. 3606742 -    -9  -3.52162   CAGAAATAACATCAA              GGCTAC TTCG GTAGCC               TTTTTTATTGCCTAA  73 160
JC861_RS17280 NONE
JC861_RS17275 NONE
JC861_RS17270 NONE
JC861_RS17265 3604606 .. 3604625 - -11.4  -4.83615   CACCTGTTATAAAAA            GCCCCGCT ATTT AGCGAGGC             GTTGTTGTTCATATA 100 206
JC861_RS17260 3604397 .. 3604415 -  -8.8  -4.82901   CGCGGCGCATAAAAA             GCCCACTC AGT GAGCAGGC             TTCGTGATGGGTTAT 100 40
JC861_RS17255 3603437 .. 3603459 - -10.6   -2.8507   CGATGGAATCAATCA           GGGTGTAAGT TAA ACTTACTCCC           CTTCACTTGCTGCAA  75 383
JC861_RS17250 3602863 .. 3602882 -  -2.8  -3.12895   TCTCCTATTAATACA            TGCTTGGG GATC CCCAAAAA             AAGTTTTCTAACCTG  44 95
JC861_RS17245 NONE
JC861_RS17240 NONE
JC861_RS17235 3599310 .. 3599326 -  -3.6  -2.67803   TTTTCATGAAATTTA              CTCCTC GGACT GAGGTG              GTTTTGTGGTTGGCT  44 6
JC861_RS17230 NONE
JC861_RS17225 3597188 .. 3597204 -  -7.2  -5.00616   TTCCTTCTGAAAAAA              GCGGCC GTAAT GACCGC              TTGTACATGACCGAA  89 42
JC861_RS17220 NONE
JC861_RS17215 3596622 .. 3596633 -  -2.2  -2.89881   CACTCATTCCAGATA                CCTC ACAT AAGG                 TTGCAGTAAAGCGTC  41 2
JC861_RS17210 NONE
JC861_RS17205 NONE
JC861_RS17200 3595475 .. 3595488 -  -8.1  -5.71983   GTAAGCATAAAAAAA               GCTGC CGCG GCAGC                TTATGGGATGGGTTT 100 44
JC861_RS17195 NONE
JC861_RS17190 NONE
JC861_RS17185 NONE
JC861_RS17180 NONE
JC861_RS17175 NONE
JC861_RS17170 3589742 .. 3589758 -  -2.2  -4.27117   CGGCGATAAGATAAA              GTGATC TTCCG GCTCAC              CGGCGATATTGCGAC  58 151
JC861_RS17160 3588253 .. 3588275 -  -3.5  -3.22306   AAATAACACAGCTAA           TAGTGGAAA TGATT TTTTCACTA           AACTCACCTCTTAAA  48 29
JC861_RS17155 3587827 .. 3587839 - -10.5  -5.76633   TCAGATATAAAAAAA                CCCGC TGA GCGGG                TCTTGATTTTAATTC 100 34
JC861_RS17150 NONE
JC861_RS17145 NONE
JC861_RS17140 3582814 .. 3582825 -  -7.2  -5.90981   TCAGACGAAAAAAAA                CCGC CGGA GCGG                 TTATTTGGATTGAGC 100 51
JC861_RS20900 3581317 .. 3581352 -  -5.4  -2.66452   ATTTTGATAAGTAAG    TGACTGCCGCGCCAG GAATCCA CCAGCGCGGCT-TCA    TTTTATTCTTCTGCT  49 28
        livG NONE
        livF NONE
JC861_RS17105 3578149 .. 3578182 - -14.9  -3.23393   TTTCAGCTGATAACA     CAAAGCAGGA-AAAAC CAC GTTTTATCCTGCTTTG     TCAGCAATCTCAGGC 100 57
JC861_RS17100 NONE
        kdpA NONE
        kdpB 3574074 .. 3574084 -  -6.8  -3.26471   TTATCCTTATACTAA                 CCCT GTC AGGG                 TCAGTAACATATCTA  61 6
        kdpC NONE
        kdpD NONE
        kdpE 3569828 .. 3569842 -  -4.4  -4.76088   CAAACTAAAAAACAA               TAAAAT ACC ATTTTA               AACACATGGAATTTT  71 271
JC861_RS17070 3565640 .. 3565669 - -19.5  -5.24531   ACGGGGTACAAAAAA       GAGGGGGATTATG AAAA CATAATCCCCCTC        TTTATTTATCTGCAG 100 45
JC861_RS17065 3564099 .. 3564133 - -13.7  -2.88231   ATCATAATCAGGATA    CGGCAGATAACGGGCA AAAT TGCCCGTTATC-GCTG     TACTGTCCGGTAATA  93 41
JC861_RS17055 3560514 .. 3560541 - -12.8  -5.30686   AACAGGCATAAAAAA        GGGGATTCCG TATGACAC CGGAATCCCC         GAAAAGGCGGGATCA 100 78
JC861_RS17040 3556143 .. 3556169 - -10.9  -5.46657   TACCTGAACAAAAAA         CGCCTTTTCTG AGCAA CAGCAAAGGCG         TTACAGACACGGTGT 100 64
        mreB 3547242 .. 3547255 -  -8.1  -3.09516   GCCTGCAGTATTGAA               CGGAC GGGA GTCCG                CTTATTCTTCACTGA  63 27
        mreC NONE
        mreD NONE
JC861_RS16980 NONE
         rng 3543346 .. 3543358 -  -5.5  -2.87683   ATATCCGTTTATATA                CGGCA GTG TACCG                CCAATGAATTACATC  50 34
        yhdP NONE
JC861_RS16965 NONE
        tldD NONE
JC861_RS16955 NONE
JC861_RS16950 3536393 .. 3536437 -  -9.3  -4.41897   AATAAACCACCAAAA GCTTACCGTCAGCTGTTCCAG TAT CTGAAAGAACTGGCAGAAAGC GCTTAATCCGCCGTC  95 28
        pmbA 3534342 .. 3534361 -  -2.7  -5.60993   TCCGGCATAAAAAAA            CCCCGGC ATAAAA GTCAGGG             TTTTTCATGCAGCAA  84 46
        mlaF NONE
        mlaE NONE
        mlaD NONE
        mlaC NONE
        mlaB 3521845 .. 3521887 - -13.5  -4.84363   TTAAACCATTAAAAA TGCCTCCGGCTGTG-CGGTC ACCT GAGTGACACAACCGGAGGCA GTTACCTTACGGAAA 100 90
        ibaG NONE
        murA 3520120 .. 3520135 - -10.4  -5.43866   TAAGGTGTAAAAAAA              GAGCGG ATAT CCGCTC               TTTCTGTTTACAGCA 100 67
        cysJ NONE
        cysI 3511411 .. 3511437 - -17.3  -4.32857   CGCCGTAAATATAAA         CACCGCGCCGC GTAAA ACGGCGCGGTG         TTTTATTTCAGGCGG 100 33
        zapE 3508015 .. 3508034 -  -8.6  -2.58528   AAATTAAAAATAATT            CCCCGAAA CCCT TTTCAGGG             GCGCGCATTATACCA  63 33
        rplM NONE
        rpsI 3506923 .. 3506936 -  -9.5  -5.64274   GCAGTTATAAAAAAA               CCCGC CGTG GCGGG                TTTTTTGTATTCCAA 100 53
        sspA NONE
        sspB 3505439 .. 3505454 - -10.4  -4.81249   CTTTAAATGCAAAAA              GACCGC TTTC GCGGTC               TTTTTATTTATCGGT 100 44
        arcB 3496286 .. 3496300 -  -4.3  -3.37531   TTAAAACGATACCAA               CAGAT TTCAT ATCTG               ACTCCTTTTGTAGTA  51 262
        elbB NONE
        mtgA 3494711 .. 3494727 -    -8  -4.37211   GAAACCGATAAGAAA              CCTGAC TTAAT GTCAGG              TTTTTTTATGGCCTT  79 214
        rsmI 3490285 .. 3490297 -  -5.5   -3.8969   GGATGTACAGAATAA                CTCCG CCC CGGAA                GACCGGGTGGCGGGA  61 47
        rnpB 3489841 .. 3489865 - -20.1  -4.05788   TGCCCTGAAATGAAA          CAACCCCGCGT CAG ACGCGGGGTTG          TGATAGTGAGGAGTC 100 31
JC861_RS16710 3488063 .. 3488089 -  -8.7  -6.15828   GGTACGAAAAAAAAA        TACCCGCCACAG ATAA CAG-GGCGGGTA         TCAGATAATAACTCA 100 55
JC861_RS16705 3487128 .. 3487145 - -11.3   -3.8448   TAATATATTATTAAA             CATCCGC TCCG GCGGATG              TTTCTTTTTCAGTTT  95 3
JC861_RS16670 3480702 .. 3480718 -  -9.4   -5.4492   TATACACACAAAAAA              GCCACC TTACT GGTGGC              TTATGAAGAAAAACA 100 294
JC861_RS16665 3479186 .. 3479215 - -15.1  -2.86961   TGATAAGACGGAAAG       CAAAACGGCCTGC ATAT GCAGGCCGTTTTT        TTATCTGTTATTAAC 100 36
        hybA NONE
        hybB NONE
        hybC NONE
JC861_RS16635 NONE
        hybE NONE
        hypA 3468967 .. 3468994 -  -3.4  -3.28712   CCCTCCCCGTCACAA        CCGGTGATGGTGT TTG ATACC-TCACTGG        CGATGGCGGAAGCCG  47 238
      blaDHA 3467038 .. 3467063 - -13.9  -2.95527   AATAATCTTAAAGTA         CGGCCCCGGCG TGTC CGCTGAGGCCG          CAGCACCGGAAAAAT 100 40
JC861_RS16610 NONE
        pbpC 3458467 .. 3458479 -  -4.1  -2.64561   CGGTAATAAAGATAT                TCACC GAA AGTGA                GAGTCCCGCTGAGTT  45 130
JC861_RS16600 3457164 .. 3457174 -  -4.6  -4.56775   ACTCGCGGGTAAAAA                 CGGC TAC GCCA                 GAGCGTATAACGTAC  70 493
        tsaD 3446550 .. 3446563 -  -9.5   -5.2112   AAGAGGATTAAAAAA               GGCGC ATCA GCGCC                TTTTTTTGTGTCCGG 100 44
        folB 3445314 .. 3445335 - -12.3  -3.22162   GGCAGATAAAATAAG           GCACTCCCG GAGG CGGGAATGC            AGGATACGAACAGCA  93 116
        bacA 3444320 .. 3444357 - -13.7  -3.06618   ATAAATAAAATATTA   CACATAAAAGCCGGTAA ACCA TTACCTGCTTTTATATG    TCCGTTATTAATTAT 100 131
        hypB NONE
        hypD NONE
        hypE 3440811 .. 3440846 - -11.8  -5.27335   GGCGGCAAAGAAAAA    TCCCCGGGGAGCATAC ACCA GTATGTGACCCGGGGA     TTTTGATGCAGCCAA 100 78
        yedE NONE
        yedF 3438472 .. 3438483 -    -3  -5.54907   TGCAGAAAATAAAAA                TGAT TTTT ATCA                 GCTGCTTGAAAAGAA  91 402
JC861_RS16520 3437357 .. 3437393 - -11.6  -4.25606   GAACACTGAAAACAA   CATCTGCGGGAAGCCCG GTAA CAGGCT-CCCGCTGATA    CCCGCTGTTTATGCC 100 34
         mak 3435177 .. 3435197 -  -4.7  -4.58283   GAAGCCGGTGAAAAA            GCCTTTATC GAT GATGAAAGC            CGTTTCAGAATCTTT  71 183
        phoB 3428373 .. 3428388 -  -2.4  -3.44848   TTTTTCCACGAAAGA              CGCTCA AGCA CGCGCG               ATCCTCTTGCGGTTT  47 51
        phoR 3427073 .. 3427086 -  -9.5  -4.67697   GCTTAAAAGAAGAAA               GCGGC AAAC GCCGC                TTTAATGAGAAGATT 100 27
        brnQ 3425275 .. 3425290 - -10.4  -5.09685   TAAGAGATACAAAAA              CCAGCC TGCG GGCTGG               TTTTTTTGTGCCTGA 100 96
        queA 3422575 .. 3422586 -  -2.2  -2.54186   ATATTTCACAAAACC                TCCG GCAT CAGA                 AAAACAGTCTGATGA  39 105
         tgt 3421386 .. 3421427 -  -5.7  -4.07124   TATCAGGCAGATAAA CCTGCCGGTGGTGCATCGC CTAT GTTATACACCACCGGGTGA  TCCCGTTTCGGGGAA  66 42
        yajC NONE
        secD NONE
        secF 3418094 .. 3418121 - -12.8   -5.4251   TTTACACATAAAAAA        CACCCTGCATGC TTGC ACATACAGGGTG         TTTTCTGTTTTTCAC 100 49
        nrdR NONE
        ribD 3416431 .. 3416457 -  -3.7  -3.53012   CCTGTGTTTTTCAAA         CTCCGGAAT AAAATTTAA ATTCCGGCG         TAAATTCAGCGATTA  51 38
        ribE NONE
        nusB 3415375 .. 3415391 - -13.7  -4.87328   CAGATAAAGACAAAA              GGCCGGT TTT ACCGGCC              TCTTTTATATCATGT 100 72
        thiL 3414299 .. 3414319 -  -5.4  -5.36441   TCCGGACACAAAAAA            CCCTGC ATCACATCA GCAGGG            TTTTTTTATGTCACT  84 58
        thiI 3409426 .. 3409447 - -11.5  -5.80727   AAAAATAATAAAAAA           CCCCGGCTC AGCA GAGACGGGG            TTCAGAGACAATGAT 100 52
JC861_RS16395 3407565 .. 3407590 -  -6.8  -6.08342   CAACAAATAAAAAAA         CGCCCGGC TGTTTATGAT ACCGGGCG          TTTGAGATTACTGTA 100 52
JC861_RS16380 3405382 .. 3405410 -   -11  -3.27498   CAGAGCTGACAGGAA       CCGGCAACCATGC TGAT GCG-GGTTGCCGG        ATAACACTCAGTCGC  81 33
        bolA 3394897 .. 3394914 -  -2.7  -3.60151   TGTGTGAAACGATAA             TG-AACCG GGG CGGTCGCA             TTTAAAAACCGAGTT  50 202
         tig 3393439 .. 3393464 - -17.7  -5.75599   GAAATGACAAAAAAA         CCGCAGGCAAT ATAC ATTGCCTGCGG          TCTTAATCAGATAAA 100 71
        clpP 3392573 .. 3392628 -  -4.1  -5.42259   TGAGCTGCAAAAAAA TATCAC-AGCACCG-CTGTACCCTGCC ACCC GGCAGAATACGGGCAGTACCGGTGTTA CTTACCGGTGTGTGT  85 27
        clpX 3391185 .. 3391202 -  -9.9  -4.78029   GTAAGAAAAGCAAAA             TGAGGGA AAAT TCCCTCA              TTTGGTTAATATTGA 100 63
         lon 3388620 .. 3388649 - -12.9  -5.61596   AGCGGGACAAAAAAA       GGCTGACAAGTCC GAAA GTACCTGTCAGCC        CTTTATTTATCTGAA 100 65
        hupB 3388107 .. 3388125 - -13.2  -6.34616   CTAAAACAAAAAAAA             GCGCATCA TTC TGATGCGC             TTCCTGTTTAGCTTT 100 93
        ppiD 3386093 .. 3386122 - -10.7  -4.27117   TTTTCAGAACAGAAA       TGCGAAAGGCTGC GAAC GCAGCCTTTCGGG        AGATGTAACACGACA 100 70
JC861_RS16295 3385666 .. 3385679 -  -6.7  -3.75153   CCCGGGGAAGGGAAA               TCAGC TTCT GCTGA                TATTACAACGCTATC  67 28
JC861_RS16290 3385126 .. 3385162 -    -3  -5.52384   CCGCCATGAAAAAAA   TCACCGGCCTGCAATAA TCAT CTGTTAC-GCCCGGTGA    CCGGCCGGGCGTTTT  82 54
JC861_RS16275 NONE
JC861_RS16270 NONE
JC861_RS16265 3379117 .. 3379138 - -14.5  -5.76237   GATATAAATAAAAAA           GGCGTCTGA ATCA TCAGACGCC            TTTTCTGCTAACGGG 100 95
JC861_RS16260 NONE
        amtB 3377316 .. 3377344 - -16.8  -5.06414   TCCCGGCAATAAAAA       GCCCCCGCTGCAC ACCC GTG-AGCGGGGGC        TTACTTTTTTTCGGC 100 40
         ffs 3376029 .. 3376043 -  -3.4  -3.86312   ATGGAGAATGAATAA               CGGAGA CAA CCACCG               GATGCAGACAGAGGC  53 95
        acrR 3369213 .. 3369226 -  -3.7    -2.973   TTATAAAATGTAAAT               CAGGC GTCT GCCGG                CGTCAGCTGCATATT  46 11
JC861_RS16215 NONE
        mscK 3365340 .. 3365353 -  -6.7  -3.05562   ACAAACTGCGCAATA               CTGAC GGTG GTCAG                GCCGGCTGAGCGCCG  58 22
         apt 3363852 .. 3363873 -  -9.4  -2.80113   CATCATGCTACCACA           GCCTCACC ATAATG GGCGAGGC            TGAGTTTGCGTTTAA  70 55
        dnaX 3361850 .. 3361867 -  -5.6  -3.72576   CTCTCTTTGACTAAA             TTGCGT ATTCCA ACGCAA              GGTGGTTAAACAGGC  61 31
JC861_RS16185 3361506 .. 3361519 -  -2.3  -2.64099   GGTTTGCATCAGAAC               GGCAT CTTA AAGCC                CGGCGGCAGCTGCAT  40 5
        recR 3360823 .. 3360859 - -10.2  -3.65827   CAATTCTGAGGGAAA   GTGACAGACGGCACAAG CCGT CTCAGGCCGTCTGTC-C    GGATAACAGGCAGAA  82 48
        htpG 3358755 .. 3358781 -  -9.6  -5.27477   ATTTCAATGAAAAAA         CCACATGATT ATCATGA AATCATGTGG         TTTTTAAGCGGGTTA 100 79
         adk 3357941 .. 3357958 - -12.7  -5.67967   ATCAGGATAAAAAAA             GGCAGCC GTTT GGCTGCC              TGACAGAAATAAGTG 100 46
        hemH 3356593 .. 3356605 -  -7.7  -3.21099   TCTCGTCATTATTAA                GGTTC ACT GAACC                CTTCTCACTCACCAT  63 218
JC861_RS16160 3355591 .. 3355623 -  -2.1  -4.13437   TAACCAAAAAGAGAA     TGTGAGCGGACA GAACCCTTAA TGCCCGCTCA-A      CCGGAAACTATGCTG  55 33
JC861_RS16155 3354186 .. 3354203 - -12.7  -5.24531   ATTGCCCATAAAAAA             CGCCGGA AAAT TCCGGCG              ATTATCTGTCAGTTA 100 47
JC861_RS16150 3353728 .. 3353743 -    -9  -5.28176   TGTACGTACAAAAAA              TCCTGC CGGA GCAGGA               TTTATATCAGAGGAT 100 71
        ushA 3348770 .. 3348787 -  -4.1  -4.16909   ATGCGAATAAAAACA             GGGAC AAGCTGAA GTCCC              GATTTTTATTACTCA  61 50
JC861_RS16135 3345706 .. 3345757 - -11.1   -2.6176   AACGGGACTGATAAG TGGTCATCATGCAGGTAACAGACGG GAAT CCGGCTGTTACCTG-ATGA-ATCCA GCCGTTACGGATTAT  76 37
        cueR 3340883 .. 3340909 - -15.8   -4.5954   TGACAGGATATAAAA         CGGCGTCCGCCC GGC GGGCAGACGCAG         AAAACAGGCGGATTA 100 38
JC861_RS16110 NONE
JC861_RS16105 3334334 .. 3334351 -  -9.1  -5.71712   TGTCACATAAAAAAA             CGGCTCC GCAG GAAGCCG              TTTTATCTTACTGAA 100 52
JC861_RS16100 NONE
JC861_RS16095 3333181 .. 3333197 -  -2.9   -4.6955   CAGCAAGAGATAAAA              CACTACG TTT CATAGAG              AACACCTTCCATTGA  64 244
JC861_RS16090 3331639 .. 3331670 -   -16  -2.69057   CCGGAAAGACAACAG      CAAAACGGCCTCTG GTGA CAGAGGCCGTTTTT       ATTTATCTCAATAAT 100 64
JC861_RS16060 NONE
JC861_RS16055 3324224 .. 3324238 -  -4.2  -3.94409   CATATCATGGACAAA               GGATTC AGT GAAACC               ATCGCGGCCACACTC  58 490
        cysS 3318680 .. 3318703 -   -11  -5.74086   AAACGAAATAAAAAA          GCCCGGCA ATAAATCA TGCCGGGC           TTTTCAGTCAGAATG 100 50
        cybC 3318105 .. 3318127 -  -9.8  -4.78848   CGCTGAAATATAAAA           CGCCCGGC AGTCATA ACCGGGCG           TTTTTAATACTGAAG 100 61
JC861_RS16000 3316100 .. 3316115 -  -7.6  -5.64274   TTAGGCATAAAAAAA              GACATC GGTT GATGTC               CATTGACTTCGAAAT 100 40
JC861_RS15995 3314688 .. 3314721 -  -6.9  -4.29738   TTACACCTATTAAAA     CAGCCATCTTTATCTT TAG ATG-TAAAGATGGCTA     TTTATCACTTAAAAT  74 30
JC861_RS20895 3314127 .. 3314141 -  -2.1  -4.39166   GCCGAGAGACGAAAA               CGTAC ACGTG GTACA               CCGTCTAGCTCATCT  58 97
JC861_RS15990 NONE
JC861_RS20890 3311647 .. 3311660 -  -3.9  -3.57406   TGGTTAGCATAAAGA               TCTAA TTAT TTAGA                AACCAAAACAGATAT  53 17
JC861_RS20885 3310877 .. 3310887 -  -2.6  -5.27476   TTGAATAAAATAAAA                 TTTA TAT TAAA                 TACGATAGTAGTGTA  76 43
JC861_RS20880 3305567 .. 3305580 -  -3.8  -2.91735   TCAACACGCGACACA               TCGC TTTAAT GCGA                AACTCTGCCTGATGT  46 60
JC861_RS15950 3304742 .. 3304754 -  -3.3  -3.04398   CTTCCCCTCCAAAAG                TGGAC ACA GTCCT                AAGCGAGGTTCTGGT  44 24
JC861_RS15945 NONE
        arsD NONE
        arsA 3301955 .. 3301967 -  -4.1  -5.18371   TTTTAGAAAATAAAA                CTTAC TCT GCAAG                CTGACTTAATGCAGA  78 14
JC861_RS15930 NONE
        arsC 3300023 .. 3300033 -  -6.8  -3.41013   CAAGCAGATGGAGAA                 CCAG GGG CTGG                 AGATAATAATGAATG  63 152
JC861_RS15910 NONE
JC861_RS15905 3296543 .. 3296568 -  -9.7  -5.88476   AAAAGAAATAAAAAA         GCGCCAATCCC GTTA AGGACTAGCGC          TAGATGTCATCAATG 100 59
JC861_RS15900 NONE
JC861_RS15895 3295140 .. 3295152 -  -2.7  -4.87291   CATTTTAATGAAAAA                TCACT ATA AGTAA                TTCATTGATAAATAA  67 108
JC861_RS15890 3294314 .. 3294324 -  -2.4  -3.61715   TAGTGGGTTTAATAA                 CGTC ATA GTCG                 GCTCCTTTCTTTGTG  49 17
JC861_RS15885 3293543 .. 3293555 -  -7.7  -4.45693   TAATATAAATAGAAA                CGTCA GAT TGACG                CTTGATGAACACCGT  82 141
JC861_RS15880 NONE
JC861_RS15875 3292108 .. 3292120 -  -6.3  -4.32131   GGAAAATAAAGCAAA                CAATC AGC GATTG                TCCTGATGAATTTGC  72 417
JC861_RS15860 3289128 .. 3289144 - -11.5  -5.36441   CTTTTATATAAAAAA              GCCCCCG GAA CGGAGGC              AAAGGACTTTCGTCA 100 76
JC861_RS15855 3287719 .. 3287774 -  -7.2  -5.58454   GGGATATCAAAAAAA CAATAATAACGGTAAGACAGGAATAAA CTC TCTTTTCGCGCCTTACC-TTATTACTG ATATTATTTATTGCT 100 33
JC861_RS15850 3287231 .. 3287262 - -11.7  -3.44274   CAACGATAATATTAA      TGATCCTCCGCTA TGACAC CAGCAGAGGATCA       TCACTGAGACAGATT  89 56
JC861_RS15845 3286409 .. 3286434 - -10.6  -6.47325   AAAAAATAAAAAAAA         GGGAATTCAT AAAATA ATGAATTCCC          ATAAAATAAAGTATT 100 71
JC861_RS15840 3285040 .. 3285053 -  -5.3  -3.48276   CTCCCGGTCAGATAA               CAGAA TCCG TTCTG                TCATGGTGTGTCTGC  57 26
JC861_RS15835 3282797 .. 3282812 -  -3.2  -5.00611   GATAAATAAAATAAA              TTCCGA AAAT TCGGAT               AAACACCCGAAAATA  71 118
JC861_RS15830 3282065 .. 3282095 -  -4.9  -3.44527   CAGCCATTATTATAA       GATGAATAGCA TTTATATTT TACTATTCATC       TTATAGTGACCTGCT  55 72
JC861_RS15825 3280750 .. 3280774 -    -3  -4.80656   AGGAACAACAGAAAA          GTTATGTT CAGTTCAGT AACATAAC          GACCATTAGCCCCTT  68 145
        adhP 3279652 .. 3279669 - -14.1  -5.60993   TCCGGCATAAAAAAA             CCGCCCG GAAA CGGGCGG              CTGAATAAGATGACA 100 59
JC861_RS15815 3278538 .. 3278552 -  -4.3  -3.71848   GGTTTCCAGGAAGAA               GGTAA AATGA TTACC               CATGAGCTGGGCCCG  58 324
        tssH NONE
JC861_RS15765 3265237 .. 3265261 - -17.3   -4.4078   CTCTGTTAATTAAAA          GACAGAGCCAT ATA ATGGCTCTGTC          CGGTACGTCTGTTAC 100 37
JC861_RS15760 NONE
JC861_RS15755 NONE
JC861_RS15750 NONE
        tssB NONE
        tssC 3258825 .. 3258837 -  -7.7  -3.12351   TGCTTTGACAGGTAA                CCACA CCC TGTGG                TGACCACTTTTGTTA  63 134
JC861_RS15735 3258246 .. 3258267 - -12.3  -4.96848   TCCCGGAGATAAAAA           CCTGCTGCC TGAA AGCAGCAGG            TTTTATTCCAACATA 100 49
        tssJ NONE
        tssK 3256101 .. 3256117 -  -9.4  -3.25824   CATCATGCAGAAAAG              CCCCCA TTGAC TGGGGG              GACTGCTCTTCCTGA  74 117
        tssL NONE
        tssM NONE
JC861_RS15710 3250775 .. 3250792 -  -6.3  -2.70932   TTTCTTCCTGAACTA             TTTCCCA ATTC CGGGAAA              TTTGTCTTTATTTTC  54 148
        vgrG NONE
JC861_RS20870 3247511 .. 3247524 -  -9.5  -3.01924   CAGCTGTCCGGAACA               GCCCC CGCA GGGGC                TGTGGTAAATCAAGG  71 35
JC861_RS15695 3246392 .. 3246404 -  -4.8  -2.99161   TAATTGATTATAAAC                GGCT GTCTA AGCC                TAATTTATAGAGTTC  50 5
JC861_RS15690 NONE
JC861_RS15685 3244980 .. 3245013 - -14.9  -3.23393   TTTCAGTTGATAACA     CAAAGCAGGA-AAAAC CAC GTTTTATCCTGCTTTG     TCAGCAATCTCAAAG 100 63
JC861_RS15675 3241992 .. 3242018 - -14.4  -6.04953   ACAGAAATAAAAAAA         GCCACCGGTCAC ATA ATGACCGGGGGC         CGTCTCTGTTTACTA 100 50
JC861_RS15665 3240598 .. 3240608 -  -4.6  -4.82901   CTTTCCCGATAAAAA                 CGAG ATA CCCG                 CCGCATTTTTGTTAT  74 113
         gss 3236929 .. 3236961 - -20.6  -5.01546   AAATGGATATAAAAA      CGGGCAGCAACCGG TGAAT CCGGTGGCTGCCCG      GGAGAAATACAGCGG 100 48
JC861_RS15650 3236547 .. 3236557 -  -4.6   -4.4715   TTTTAATGTACAAAA                 CGCC CGA AGCG                 CTTGGTAAAACGGGC  68 2
        ykgO NONE
        zinT 3235677 .. 3235707 - -11.2  -5.03961   AATGAAATAACAAAA       CAGCCCGGAAAC AACATCA GTTTTCGGGCTG       TTGGTTTTATATTGC 100 62
JC861_RS15635 NONE
JC861_RS15630 3233074 .. 3233091 -  -5.6  -2.72461   CAATGCCCGGTAAAG             GCTGAT TGTGAG ATCAGC              ACCTTACCGGGTCAT  52 81
JC861_RS15625 3231703 .. 3231725 -  -7.7  -3.03441   TATCAGCTGGTAACA           GACGCTCCT TTTAC AGAAGCGCC           TGTGAATCCCGGGAA  62 55
JC861_RS15620 3229439 .. 3229469 -   -12  -5.40072   CTGCCCGTAAAAAAA       CCGCGATAATTGTC ATT AATAATTATCGCGG       TTTTGTTTTTACTGC 100 47
JC861_RS15560 NONE
JC861_RS15555 NONE
JC861_RS15550 NONE
JC861_RS15545 3212447 .. 3212463 -  -4.3  -3.73224   TGACCGCCCAGGAAA              TCAGCCA GTT TGGCCGC              TTTGGTCTGAAACCA  58 376
JC861_RS15535 3209948 .. 3209990 -  -8.3  -2.57683   ACATCTCCGGACAAC CCCGCGAACCTGCGGAGCCGG TTT CCCGC-CCGCTGAT-CGCCGG TTTTCTCGCCGCTCT  59 120
JC861_RS15500 NONE
JC861_RS15495 3200774 .. 3200813 - -16.6  -3.17571   AAGGCGGCAAGGGAA  GAATTCCGGGGAACATAC ATCA GTATGTGACCCGGAATTC   TGAGTGCAGCCAACA 100 318
JC861_RS15470 3193280 .. 3193297 -  -7.1  -2.83164   GTAGCGATCATGACA             GATGAAA TTAA TTTCATC              TGTCAATGAGGCTGA  59 60
JC861_RS15465 3190956 .. 3190971 -  -6.2  -3.52307   CAATATATAGCAGAA              TAAAGC CGCA GCTTTA               ATGATTATATCCGGG  61 120
        rimO NONE
JC861_RS15455 3188461 .. 3188474 -  -9.5  -5.47218   TTTCATGTAAAAAAA               CCGCC GGAC GGCGG                TTTTTGCACTTATTT 100 35
JC861_RS15430 3184090 .. 3184137 -  -4.1  -2.97475   CCTGCTAGCACAAAT GACCGACCGGCAATTAGCAAC CAGTGC GATGTTAATTGCCGGCTATTC TCACATACAGGGGGT  47 68
JC861_RS15425 3183175 .. 3183206 -   -14  -3.09415   GATAAATCAGACAGA      TACAAAAAAGCGCCC GAT GGGCGCTTTTTT-TA      TGCTGCTTTATTTTG 100 33
JC861_RS15420 3181848 .. 3181858 -  -2.4  -3.29584   GTCATAATAAAATTA                 CGGG TGC CCTG                 TTCAGGGTTTCATGC  45 27
JC861_RS15415 3181195 .. 3181218 - -13.2  -3.65696   AGTGACATAAATTAA          TAAGGCCTGC TATT GCAGGCCTCA           GATAATTGCTCAGTC 100 52
JC861_RS15410 3180322 .. 3180344 -  -9.2  -6.02919   GCAGAAACAAAAAAA           CCGCAAAACA GAT TATTCTGCGG           TTATTGAACGGCTTG 100 50
JC861_RS15405 NONE
JC861_RS15400 NONE
JC861_RS15395 3175913 .. 3175931 -    -9  -3.60098   ACGCCTCACCTTAAA             GATGTATT TTA AATACATC             TTATAGCCTTTCCGG  75 58
        tehB 3174982 .. 3175015 - -15.2  -4.20531   GATACTGATGCAAAA     CGGCACGCCGCCGG AAAAAA CCGGTGACGCGCCG      CGAGGGTAATAATAA 100 41
JC861_RS15380 3171980 .. 3172003 -  -9.6  -3.64487   GCACAGTGTGAATAA          TAACGGGTAG TTTC CTGCCCGTTA           TTATTTCTGTTTAAA  78 50
         hcp 3165481 .. 3165504 -  -3.1  -3.29626   TAACAGTTACAGCAA          TTACGCGCC TAACAC AGCGTGTAA           ATCATTTTCTACAGT  47 2
         hcr 3164358 .. 3164376 -  -9.5  -5.19879   CCGGAAACAGAAAAA             GCGCCGC GGAAA ACGGCGC             TTTTTTGCAATTATA 100 56
JC861_RS15345 3163669 .. 3163685 - -12.3  -2.64051   GCACTATACAACGTA              TCCCGCA GAC TGCGGGA              AGTTACCTCGGGTTA  88 230
JC861_RS15340 3162376 .. 3162420 - -13.8  -3.29109   AAAACGGCACATGAA CTGACTGTCCGCCGTCACAACA AAG TGTTGCG-CGG-GGAGAGTCAG TACCTGTGCCGTCAG  95 99
JC861_RS15330 NONE
JC861_RS15325 NONE
JC861_RS15320 3160643 .. 3160658 - -10.4  -4.67354   AACAGACATACAAAA              CCGGCT GAAA AGCCGG               TTTTTTTGTACACTG 100 55
        speA 3156850 .. 3156870 -  -3.2  -4.55287   CTTACTGACACAAAA           CCGGACGTA TTAT TCCG-CCGG            GTATTATTCATCTTC  63 45
        speB 3155845 .. 3155862 -  -9.1  -4.70659   CGGCAGATGTAAAAA             GACCCGC AGTT GCAGGTC              TTTTATTTTAACGGT 100 54
JC861_RS15300 3154879 .. 3154903 - -15.8  -5.76633   GTATACATAAAAAAA          TCCGCCGCAT TCAGC ATGCGGCGGA          TGTCTGTGAATATAA 100 51
JC861_RS15295 3153865 .. 3153882 -  -9.9  -3.92641   AACCTGATTCAGAAA             GCCACAT TTTT ATGTGGC              TTTTTTATTGCTGAC  86 54
JC861_RS15290 3152395 .. 3152423 -  -8.9  -4.37092   ATTTGCCTCACAAAA        TGAGGCGAATAGC ATG GTTATTTGCCTCA        TCCTCTTATTATCCT  86 34
JC861_RS15280 NONE
JC861_RS15275 3149393 .. 3149413 - -16.9  -4.64598   GAATCACTGCAAAAA            CACTGCCGC TGA GCGGCAGTG            TGAGATTGCTGACAA 100 49
JC861_RS15265 NONE
JC861_RS15260 3146757 .. 3146793 - -24.6  -4.68994   ATCATCACTGAAAAA   CCCGCCGCAGCC-CTGA TTAT TCAGCGGCTGCGGCGGG    TTTTCTTTTATCAGA 100 45
JC861_RS15250 3144585 .. 3144595 -  -8.2  -3.36505   AGACCTGACGCACAA                 CCGG TCA CCGG                 TGGTCAGAGCGGACA  69 280
        leuO 3132609 .. 3132638 - -16.4  -5.31275   CGGGATCACAAAAAA       GCCCCGGCAGGC GTATTT GCCTGCCGGGGA        GAGAAATGAATTAAA 100 48
JC861_RS15195 3130603 .. 3130631 - -13.2  -4.96848   GGCGGGATATAAAAA       CGGCACTGCACAG AAAA CCG-GCAGTGCCG        CAGAGAGAATTATTC 100 35
        ilvI NONE
        ilvN 3128083 .. 3128101 -  -9.5  -3.91197   TTACAAATCAGGAAA             CGGCCCG AACAA CGGGCCA             AATAAGAAGAGTGAT  83 67
         cra 3126998 .. 3127021 - -10.4  -5.42975   GGATATAAATAAAAA          TACCTATACG TTTC CGTACAGGTA           TCAGAAAAAATAATA 100 58
        mraZ NONE
        rsmH NONE
        ftsL NONE
        ftsI NONE
        murE 3121381 .. 3121408 -  -3.4  -3.24747   GTGCGATATCAGCAA        GGGAG-AACGGGA TCA TGCCATCACTCCC        AGCAGGCGGGCGACG  47 10
        murF 3120026 .. 3120044 -    -3   -2.9462   CAGCCAGCCAAATCA             GCATGGGA CAT TCTCCTGC             AAGGCGTGCACAACT  44 4
        mraY NONE
        murD NONE
        ftsW NONE
        murG NONE
        murC NONE
JC861_RS15120 NONE
        ftsQ NONE
        ftsA NONE
        ftsZ 3109565 .. 3109604 - -11.7  -3.14132   GTCTCGTTTGATTAA  CTGTCTCCC-TGTCATTA TAAAC TAATGACAAGGGAGATAG  TTTAGCACAAAAAGC  84 62
        lpxC 3108408 .. 3108418 -  -4.6  -5.34555   TCAGAGGACAAAAAA                 CAGC AGA GCCG                 GGACGGAAACTGAGT  90 232
        secM 3107447 .. 3107472 -  -2.6  -2.82623   TCTTTTGGAGAATTA         CGCG-GATATC ACGTG GATATTGCGCG         AATATTACGCAGATT  42 30
        secA 3104608 .. 3104624 - -11.5  -4.39998   TATTTACAGAAGAAA              GGCGGGA TTC CCCCGCC              TTTTTGCTTTTTATG 100 62
        mutT 3104058 .. 3104071 -  -2.3  -5.06414   GCTGCGGAAGAAAAA               CGGAT TGCC AGCCG                GAGTGACCTTTCTGA  74 138
        ampD 3097956 .. 3097968 -  -6.3  -3.05384   GGGTTTTGTAGTCAA                TTGGT AAT ACCAA                TTTCTTTTACAGGGT  56 446
        pdhR NONE
        aceE NONE
        aceF 3092364 .. 3092378 -  -4.9  -3.01712   CCTGCGCCGCTAAGA               CCGGC TCTGC ACCGG               TCTCAGTGTAATTGC  50 41
        lpdA 3090705 .. 3090726 - -12.3  -5.65513   CAGGAATTAAAAAAA           TCCGGC-GCC AGA GGCCGCCGGA           TTTTTATGTTCAGCC 100 71
        acnB 3087696 .. 3087721 - -14.8  -5.65177   ACAGGTATAAAAAAA         CGGGAGACAG TGTCTG CTGTCTCCCG          CCGGTAAAATAACTG 100 64
JC861_RS15015 3087105 .. 3087115 -  -5.4   -5.5454   GGAAATAAATAAAAA                 CAAC ATT GTTG                 CAATAACCGACCGAT  87 109
        mscS 3086168 .. 3086191 - -11.7  -5.78622   TTACGGCAAAAAAAA          GCGGCACCC GGAAAA GGGTACCGC           TGATAATATACACCT 100 42
JC861_RS15005 3085539 .. 3085586 - -10.9  -5.17054   ATAACATGCAAAAAA TCCCGATAATTATTCAATCCAC GCCGG ATGGAATGAATA-TTACCGGGA TTTCAGTATTAGTGA 100 95
        argO NONE
JC861_RS14995 3084067 .. 3084078 -  -7.2  -2.69151   GGGCGTCAGACATTA                CGGC AGGC GCCG                 CCTGAAACGGATTAA  58 37
        rpiA 3082345 .. 3082362 - -11.3  -6.17033   AAAAAAAATAAAAAA             GGAACCG TCTC CGGTTCC              TTATTCTGTATCGGT 100 63
        serA 3080768 .. 3080795 -  -9.8  -4.81644   CAAAGAAAACGAAAA        GCATGCGCGTCA TGGA TGACGCGCCTGA         GCGCACACGGACGTG 100 93
JC861_RS14960 3078642 .. 3078653 -  -4.4  -2.95896   TGATGATTCAGAAAT                CTGA TGGT TCAG                 TGTGCAGCAGATTGT  47 65
        pepP NONE
        ubiH NONE
        ubiI 3074775 .. 3074791 - -11.5  -3.75571   GAATGCACTAAAACA              CCGGCCG GAT CGACCGG              TTAAATTTTAGTGCA  95 76
        gcvT NONE
        gcvH 3072956 .. 3072977 - -13.1  -5.82388   AAACCCGAAAAAAAA           CCCTGTTTG CTTA CAAACAGGG            TTCCGCTAATCCGTC 100 39
        gcvP 3069983 .. 3070008 - -19.1  -5.24129   TGCGCTGATAAAAAA         GGCCGGTTGTG ATAA CACAACCGGCC          TTTTCTTTATCGTTT 100 46
JC861_RS14915 3067645 .. 3067662 -  -9.8  -3.53012   GCTGTCCGGCTGAAA             GCCCGG TTTTCC CCGGGC              CCGTCAGCCGGAAAA  78 105
JC861_RS14910 3067178 .. 3067192 -  -5.7   -3.5393   AGGAGCTGCTGTAAA               CGGAT CAGAT ATCCG               GATACTGCAAAAGCA  59 15
        xerD NONE
        dsbC NONE
        recJ NONE
        prfB 3061953 .. 3061968 -  -4.6  -3.89614   TTTAATCCTTATAAA              CCCGCT TTTA AGCTGG               CCTCAATAAATTTAT  59 3
        lysS 3060376 .. 3060395 -   -10  -5.83822   GATAGTGAAAAAAAA            GCCCCACA ATCT TGTGAGGC             TCCGTATTCATTTAC 100 49
JC861_RS14875 3059986 .. 3060000 -  -2.8  -3.10056   ATGACTTATTCAAGA               TCACCA TCG TGCTGA               ACGGGTCTGTTTTTT  44 265
JC861_RS14870 3059512 .. 3059522 -  -2.4  -2.87931   TTCAGCCTTTACACA                 CGGG CTT CCTG                 CGATGTACATAAATC  41 86
JC861_RS14865 NONE
JC861_RS14860 3058371 .. 3058384 -  -2.5  -5.37593   GCGTAAATTAAAAAA               TAAAT ACAT ATTTA                ATATAGTTACTACGT  76 256
       speFL 3057660 .. 3057680 -  -4.7  -3.24232   GTGTGTTGAAATATA            GTCAGACAT ATC ATAGCTGAC            AGCGATTTTATAACT  53 425
        potE 3052840 .. 3052866 -  -7.3  -5.14563   CGCTGCAGGAAAAAA         TCCTCCCGC CGTAACTGC ACGGGAGGA         ACCCACCGGAGAGTG  90 45
JC861_RS14830 3052035 .. 3052066 -  -9.4  -3.32562   ATAAATGCCTTATAA      CCGGGTATATTCCG CAGA CAGAATAACCCCGG       ATAAAAACAGGGCTG  74 81
JC861_RS14825 3051166 .. 3051179 -  -9.5  -4.59773   CGTTATCTGCAAAAA               CCGGC AGAG GCCGG                TGATGCTTATGCTCA  91 311
JC861_RS14815 3048647 .. 3048666 -  -2.8  -3.62849   CTGATTAAAGTATAA            CTATAGAG TTAA CTCCAGAG             TCAATATTATCAGAT  50 88
JC861_RS14810 NONE
JC861_RS14805 3047941 .. 3047962 -  -8.7  -4.43681   GATGGAACAGGAAAA           GCCGGAGTA AAGT TACTCCGGT            TATCTAAAAATACGC  93 29
JC861_RS14795 3046224 .. 3046235 -  -2.2   -4.7497   GCGATGCAGGAAAAA                GGCT GGAT AACC                 GCTGACGGAACCGCA  68 296
JC861_RS14770 3043451 .. 3043481 -  -2.3  -4.17316   AGCGCCGTAAAATAA       CCAGTCAGGGCGG TCACC CCGCCCGTTCTGC       TGCCTGAAAGGCGGA  55 8
JC861_RS14760 3042027 .. 3042040 -  -9.5  -3.29829   GACACCGCCTGAGAA               CCGCC TGCG GGCGG                CGCTGCGCCGGAGCA  74 270
JC861_RS14660 NONE
JC861_RS14655 3027068 .. 3027083 -  -3.2  -2.87274   GCGGAGAAGTAAGGA              TTTGGC GTCA GCCACA               GTATGTCCTGTGCAG  43 17
        sctV 3024779 .. 3024794 -  -5.4  -2.85061   ATAACCTGATAATCA              CCGGAT GAAT ATCCAG               CCTCATTAACGCCAG  50 154
JC861_RS14645 3023900 .. 3023915 -  -3.2  -5.03747   AAATGGTGGAAAAAA              TAGCCT AAAT AGGCTG               ATTCGATGTGTTTGC  71 76
JC861_RS14625 3020414 .. 3020431 -  -4.1   -4.5852   CAACGGAAAGTAAAA             CTCCAGT GCTA ACCGAAG              TAACAACACGAGTTT  67 462
JC861_RS14610 3017987 .. 3017999 -  -9.1  -3.31248   CAACAGTTTCTATAA                TCGCG TTT CGCGA                ATCCGTGATATGAGC  71 216
JC861_RS14595 NONE
JC861_RS14590 NONE
JC861_RS14585 NONE
JC861_RS14580 NONE
        phnG NONE
        phnH NONE
JC861_RS14565 NONE
JC861_RS14560 NONE
JC861_RS14555 NONE
JC861_RS14550 3008270 .. 3008292 -  -9.2  -3.53811   CGCACCTTCCTTAAA           TGTAGACGGT TTA ACCGTCTAAA           GAGATTGACTGATCC  76 13
JC861_RS14535 NONE
        sctE NONE
        sctB 3004532 .. 3004547 - -11.8  -5.02231   TAAAAATAGCAAAAA              GGGCGC ATCT GCGCCC               TTTGGAATACAAGGT 100 50
JC861_RS14520 3003984 .. 3003996 -  -9.1  -2.79968   TATGCAACCTGAAAC                GCCTG AAA CAGGC                CATTTTCCGGCAGAT  67 108
JC861_RS14515 3002675 .. 3002718 -  -5.5  -2.89421   TCAATAATCAGCATA TACTCCTCCGGTGT-ATTCA GTGGA TAAACGATACCGGAGAAGTA TAACGGATTTGGCTG  50 53
JC861_RS14510 3002122 .. 3002143 -  -8.7  -2.93073   CCGCGTGAATAATCA           GGATTGCCG GGCG CGGTAATCC            GCCTGTGTGATTTTA  68 1
JC861_RS14500 3001339 .. 3001379 -  -3.4  -5.05782   AGTGATGTGAAAAAA CCGCTATCTCCCCTG AAGGCACAAAAA CA-GGGAGATAGCGT  TTCCTGTAACAGGAA  71 46
         eco 2999755 .. 2999770 - -10.4  -5.94214   AACAGAATAAAAAAA              CACGGC GGAT GCCGTG               TTTTATATGTCAGAA 100 50
        psiE 2999068 .. 2999078 -    -4  -3.40674   GGATCAGCCAAAAAT                 GAAA TTC TTTC                 TTATGCCAAAGAGAT  49 208
JC861_RS14470 2997324 .. 2997364 - -14.2  -3.81414   AGGTGCAACTAATAA CAG-ATAACCGTTGCGGAT TCAT ACCCGCAACGGTGATTCTG  TCAGAAGATAATAAT 100 40
JC861_RS14465 2996347 .. 2996358 -  -3.6  -4.11141   TTCTATATAAAAAGA                CGGA TATA CCCG                 GAGAGTCGGTATTGT  60 44
JC861_RS14450 NONE
JC861_RS14445 2992503 .. 2992518 - -10.4  -4.68124   TTAAGATACAGAAAA              GCCACC TGAC GGTGGC               TTTTTGCATTTATGA 100 268
        galE NONE
JC861_RS14415 NONE
        galK 2982190 .. 2982208 -  -5.9  -3.08471   GAGAAGGTCACGGAA             TCCGCTG AGCGG CGGCGGA             TCTGCCAGCGCCGGT  55 410
JC861_RS14395 2979934 .. 2979961 - -11.4  -5.93809   GCGGGACAAAAAAAA        TGCTGCAAATTC AGAC GAATTTGCAGCC         TTCTAACAAAGTACC 100 89
JC861_RS14390 2977568 .. 2977607 - -13.6  -3.17571   AAGGCGGCAACCGAA  GGAAACCGGGGAGCATAC AATG GTATGTGACCCGGTTTCC   TGAGAGCAGCCAACG 100 69
JC861_RS14385 2976014 .. 2976043 - -10.2  -3.93288   TGTTATGGAAGGAAA       TAACAGAGGAAT ATGGGG ATTCCCCTGTTA        TTTTTGGTATTTTCA  89 65
JC861_RS14380 2974598 .. 2974617 - -13.6  -5.38054   CCGCAGAAACAAAAA            CACCGCGT ACTG ACGCGGTG             TTTTTCTATTTATAA 100 47
JC861_RS14370 2973222 .. 2973236 -  -8.5  -5.46706   ACCGGAAAAGAAAAA               GCGCC TTTAC GGCGC               TTTATCCGGGGATGA 100 43
JC861_RS14360 2970784 .. 2970800 -  -2.9  -4.16146   AAAACAGGCGGAAAA              TATCCGC AGA GCGAAAA              GCGGGATGCAGGTGA  60 305
JC861_RS14340 2965101 .. 2965129 -    -9  -4.05033   GGGAGTCGATAGAAA       TGGTGCGCAGATA TGCC CATCTG-GCACCA        AATCATCTTACCGAA  81 143
JC861_RS14275 2956628 .. 2956650 - -10.6  -2.83345   CGCAGATACTAATTA           TAGCCCATTC GGT GAGTGGGCTA           TGGTGAGTTAACCAG  75 33
JC861_RS14270 2955816 .. 2955836 -  -2.5  -4.59919   AAATCAGAAAAATAA           CCCCCAGC CCTCCC GC-GAGGG            CTTTTTTGTGCCTAT  64 37
JC861_RS14240 NONE
JC861_RS14235 NONE
JC861_RS14230 NONE
JC861_RS14225 2950346 .. 2950357 -  -7.2  -4.37886   CGAGTGCTGATAAAA                CGCC AGGC GGCG                 GGTGGGGAATAGTCG  75 67
JC861_RS14220 NONE
JC861_RS14215 NONE
JC861_RS14210 NONE
JC861_RS14205 NONE
JC861_RS14200 NONE
JC861_RS14195 NONE
JC861_RS14190 2946487 .. 2946502 - -10.4  -4.84527   TGCAGATATGAAAAA              GCCCTC CGGA GAGGGC               TGTTATGCATGCTTC 100 305
JC861_RS14180 2944751 .. 2944764 -  -3.9  -3.15861   CATGAGGCGCATCAA               TGAAA CGGG TTTCA                ATCGGCAGTGATGGG  48 367
JC861_RS14175 2944331 .. 2944355 -  -4.1  -3.63515   GTTCATCCGGAATAA          CCGGCAGCGGA CAA TCAGCCGTCAG          TTGTGGCGGGATCGG  54 15
JC861_RS14170 2943577 .. 2943596 - -11.4  -4.59773   GGTTATTCGTAAAAA            GCCCCGCT ATTT AGCGAGGC             GTTGTTGATAATGAT 100 139
JC861_RS14165 NONE
JC861_RS14160 2942394 .. 2942408 -  -9.2   -5.5112   GGTAGTAATAAAAAA               GACCGC TGG GCGGCC               TATTTGGATTTAGCG 100 25
JC861_RS14155 2941720 .. 2941735 -    -4  -3.57144   GGCGGCATCCTCAAA              TAACTC GTCA GAGTCA               GGCATGTACTTTGAA  52 306
JC861_RS14140 2940018 .. 2940030 -  -2.7  -3.64703   TTGTTGTCACTGAAA                TTCCT CTT AGAAA                TAGAATTGCGCCGGG  50 19
JC861_RS14135 NONE
JC861_RS14130 2937595 .. 2937613 -  -2.4  -3.38072   GCGATTTAACATGAA             TACCCGAA AGC TTCATGTA             GTGGCCTCTTTGGTT  45 39
JC861_RS14125 NONE
JC861_RS14120 NONE
JC861_RS14115 NONE
JC861_RS14110 NONE
JC861_RS14105 NONE
JC861_RS14100 2933721 .. 2933739 -  -3.1  -2.62184   TTCGCCGCCATATCA            CACCGCCG TTAT CAG-GGTG             TAGTCGTCCGCTATG  42 4
JC861_RS14095 NONE
JC861_RS14090 2932877 .. 2932892 -  -8.2  -5.63517   TTTGCAAATAAAAAA              GGCCGC ATAA GCGACC               TGTTTGAGATGTGTC 100 44
JC861_RS14085 2932063 .. 2932080 -  -5.5  -3.27923   CCTGAACATTATCAA             GGGCACC CGGA GATACCC              TTTGTAATATTTAGG  55 36
JC861_RS14080 2931016 .. 2931029 -  -8.1  -4.17274   AACTAAATAACCAAA               GGCCA AGGA TGGCC                TTACTTATTCATTAT  76 341
JC861_RS14065 NONE
JC861_RS14060 2929001 .. 2929018 - -10.5   -5.0925   CCTTAAAATGAAAAA             CCCCGCC GGTT GGCAGGG              TTATATTAATAACAA 100 49
JC861_RS14055 2925601 .. 2925617 - -12.3  -5.14563   TGTTCCATTAAAAAA              GCCACCA TAC TGGTGGC              TGTTAATAGCGCTGA 100 28
JC861_RS14050 NONE
JC861_RS14045 NONE
JC861_RS14040 NONE
JC861_RS14035 NONE
JC861_RS14030 NONE
JC861_RS14025 NONE
JC861_RS14020 NONE
JC861_RS14015 2918886 .. 2918897 -  -7.2  -6.15828   TGGACGAAAAAAAAA                CCGC CGGA GCGG                 TTTCAGGGATTCAGC 100 49
JC861_RS20860 2917337 .. 2917384 -  -8.5  -3.88703   GCGTACAAAGAAAGA CTCGGACTGCCGTATGATCTGT ACGAA ACAGAAAAC-CAGCAGCCCGAG CATTTGCGGCCGTAC  74 112
JC861_RS13990 2915762 .. 2915782 - -11.1   -4.2349   GCCTGACACTCAAAA            GCCCCGC AATTTCA GCGGGGC            TTCGGTATATAGCCC  93 51
JC861_RS13975 2912747 .. 2912772 - -11.3  -5.14965   AGTGCCAGTAAAAAA         TA-AAGCCTCCG GAA CGGAGGCTTCTA         TCTGTCGTCAGGATT 100 42
JC861_RS13970 2911934 .. 2911951 -  -4.1  -4.39426   CATATTCTGAGAAAA             CCATCAC TAAT ATGACGG              TGTTACAGCATAAAA  63 80
JC861_RS13965 2911417 .. 2911433 -  -5.1  -4.63748   AAATAACGAAATAAA              CGGACAT TTT ATCTCCG              TAAAAAAAGGGTTCA  73 38
JC861_RS20855 2910507 .. 2910520 -  -2.4  -2.93466   AAAAATATTAATAAT               CAGA AGGCAG TCTG                GTTGTCTCAATGGGC  42 122
        catA 2909778 .. 2909804 -  -5.9  -6.04378   AAAGGATAAAAAAAA        GCCACCAT-TCC TTCC GGATACAGTGGC         TTAAATAAAGTATTA 100 47
JC861_RS13945 2907286 .. 2907326 -    -4  -3.75824   CACTCTATAACATAA  GCCGTCATATACCTTATC GGAAT GTTAAGGTATTTCAGGGC  TGCGCTGATACTCAG  57 37
JC861_RS13940 NONE
JC861_RS13935 NONE
JC861_RS13930 2904827 .. 2904844 - -12.7  -3.05596   CAGTGCCTGACTGAA             CGCCCGT TTTA ACGGGCG              TTTGTTTTTTTATTT  93 60
        zipA 2897495 .. 2897512 -  -9.8  -5.45726   TATACCTGAAAAAAA             CCCCCG TCATTG CGGGGG              TTTTTATGCGATTTA 100 47
        ligA 2895404 .. 2895423 - -12.2  -3.65902   CTGATGTGACTGAAA            CGGTCTTC CGCG GAAGACCG             TTTTTCATCATTGTT  93 42
JC861_RS13880 2894766 .. 2894788 -  -5.6  -4.21768   CAAGGAACTGGAAAA           TACACTGTCA TTA TTACAGTGCA           CATTGGTAGCGCAAC  67 396
JC861_RS13870 2893827 .. 2893845 -   -16  -3.87149   TCCACCAAATTCAAA             CCCCGGTC TCT GACCGGGG             TTTTTTGTTTCTGTT 100 46
JC861_RS13850 NONE
JC861_RS13845 NONE
JC861_RS13840 NONE
JC861_RS13835 2891391 .. 2891402 -  -2.2  -2.76189   CAACTGAGCTAACGA                CCCA TACC TGAG                 TGATGCGGGAGAATC  41 49
JC861_RS13830 2891290 .. 2891301 -  -5.8  -2.76189   CAACTGAGCTAACGA                CCCA TCTT TGGG                 ATTTTCTTTTCAGGA  53 42
JC861_RS13825 2890995 .. 2891018 - -12.4  -2.50346   AAGAAACAGAGATAT          GCCGCTCCGG GCTG CCGGAACGAC           GTCAGTATTGGTTAT  86 224
JC861_RS13820 2889783 .. 2889815 -   -10  -2.89069   AGTCAGAAAAACTGA     GTGATTCCGGTGGTG CGCT CACCACCGGAAT-AT      TATATCAGCAGAATA  72 62
JC861_RS13810 2888874 .. 2888887 -  -5.9  -5.24989   TCAGACATTAAAAAA               GAGGC CTCA GCCCC                TTTTCTTATTGCATC  86 67
JC861_RS13805 2888123 .. 2888133 -  -8.2  -2.76087   AATATATCGCCAAAC                 GCCG TCC CGGC                 CTCTATTTTATGTGT  60 141
JC861_RS13790 2886509 .. 2886526 -  -9.8  -2.62184   GGTGTCCTGACAGCA             GGCCGG TGTTAC CCGGCC              TGCTGTTTTCCTTAA  71 50
JC861_RS13785 NONE
JC861_RS13780 NONE
JC861_RS13775 NONE
        efeB 2882868 .. 2882886 -  -7.4  -3.60006   AAGCACAGGGTGAAA             CGTATCTG AAT CAGATGCG             CGCCACAATTCCGAC  66 231
        tdcB NONE
        tdcC 2878559 .. 2878580 - -15.9  -5.96521   ATTAAGCAAAAAAAA           CCCGCACTC CGGT GAGTGCGGG            CTTTCCGTTATTAAC 100 52
JC861_RS13750 2877809 .. 2877830 - -10.1  -4.83243   GGGATATAAAATAAA           GCTGCCACC GGGG GGTGGCAGT            CAGAATATATTACGG 100 35
JC861_RS13745 NONE
        uvrC 2874871 .. 2874901 -  -3.2  -3.34043   GCCATTATTTTATAA       GTCAGATGAAAAAG CCG CTTGCGCATCTGCC       GGCACATATTACCGC  47 181
        pgsA 2874270 .. 2874303 -  -5.4  -4.77157   TTAATTCATGAAAAA     TGATCG-TTCGCTGT TTTTT ACAGCACATCGATCA     GGCTTCGCTCAAATC  75 23
JC861_RS13730 NONE
JC861_RS13725 NONE
JC861_RS13720 2873855 .. 2873871 -  -9.4   -5.4251   TTCAGACACAAAAAA              GCCACC GCAAG GGTGGC              TTTTCTTGACTCTAA 100 69
JC861_RS13715 2873048 .. 2873080 - -12.1  -3.81027   TTTAAGTAATTCAAA      CCAGCAATGAAGGGT TAT ACCCTTCATTGCTTT      ATATTATCAGCTGGT 100 204
JC861_RS13705 2869230 .. 2869247 -  -5.5  -5.40873   AACACAAAAAGAAAA             CCGGG CATTCTCC CCCGG              CATCATTATGCTGCA  84 42
JC861_RS13700 2868882 .. 2868900 -  -4.6  -3.29043   AAGTTCTCTCCACAA             TCTCTGAA CAA TTCAGATA             ATATTTCATTAATCC  53 34
JC861_RS13695 2868351 .. 2868375 -  -8.6  -5.59879   TAGAAACACAAAAAA          CGGCATATCT GAAAA AGAGATGCCG          TAATTATTATTGAAT 100 43
JC861_RS13690 NONE
JC861_RS13685 NONE
        csy3 NONE
       cas6f 2864745 .. 2864760 -  -5.4   -4.5442   GCTTTAATGATAAAA              CCG-GCA ATC TGCACGG              TACGCCAACCGAATT  72 273
JC861_RS13665 2862278 .. 2862304 - -10.2  -3.53444   GTACCGGCCCGGAAA         TGCTGCCATGGA TTA TCCATAGCAGAA         CTCAACGCCGGGCTC  80 11
JC861_RS13660 NONE
JC861_RS13655 2859352 .. 2859369 -  -2.7  -2.94924   GCCGGATGGATAAAC             GTCAGCCG CAT CAG-TGAC             TGCCTGATTTTGCCG  43 18
JC861_RS13650 NONE
JC861_RS13645 NONE
JC861_RS13640 NONE
JC861_RS13635 NONE
JC861_RS13630 NONE
JC861_RS13625 2853009 .. 2853036 -  -9.8  -4.59414   GCAGAATAACGAAAA        GCATCCGTGCCA TGGA TGGCACGGCTGA         GCTTACAGGGATGTA 100 104
JC861_RS13590 2846184 .. 2846201 -  -3.4   -3.6269   GGACTGACATAAATA             GGTCTG TACTTC CAAACC              AATGCCGATATTAAG  51 105
JC861_RS13585 2845770 .. 2845785 -    -9  -5.71712   CCGGACATAAAAAAA              CCTCAC CGGA GTGAGG               TTTTTAAAATCTGTG 100 56
JC861_RS13580 2844940 .. 2844973 -  -3.6  -2.84229   ATAGCCGGAGTAAAT     CTGCCCGTCTGCCG TTATTC CGGCTTGCGGGCAC      TAAGCAGAAAGATCA  45 6
JC861_RS13540 NONE
JC861_RS13535 2839615 .. 2839633 - -14.6   -3.0782   TAACCCCCGAAGAGA             TTGCCGGG AAT CCCGGCAA             CGGAGAAATACATCT  93 232
JC861_RS13525 2838741 .. 2838752 -  -7.2  -5.93809   CGGGTACAAAAAAAA                CCGC CGGA GCGG                 TCTGTTTGGATTTCG 100 108
JC861_RS13520 2837618 .. 2837639 - -13.1  -4.24204   CACGGATAGCGAAAA           CCCTGTACT GAAA AGTACAGGG            CAGGATTATTGGTAA 100 293
JC861_RS13455 NONE
JC861_RS13450 2828985 .. 2829007 -  -6.9  -3.06501   TATAGCGCGACCGAA           GCCGGAGGC CGTAT ACCTTCGGC           TTCACCCTTTCTGGT  58 27
JC861_RS13445 NONE
JC861_RS13440 NONE
JC861_RS13435 NONE
JC861_RS13430 NONE
JC861_RS13425 NONE
JC861_RS13420 2826256 .. 2826269 -  -3.1  -3.56273   TTTACCACCACAGAA               TGGAC AGGT ATCCA                GTGGCTGCCAGTGCG  49 246
JC861_RS13410 2825892 .. 2825910 -  -8.1  -3.18264   CTCTCCACTCATTAA             GCGCAGC CGTAT ACTGCGC             GTTTTACATCGGGAC  63 44
JC861_RS13405 2825082 .. 2825097 -  -4.6  -2.57067   TTAACAGGTAATTCA              TCAGGC CACC GCCGGA               GTCATCATCAGTGCC  48 10
JC861_RS13400 NONE
JC861_RS13395 2823291 .. 2823306 -  -8.2   -5.4833   CCAGGCAATAAAAAA              CCCCGC GATT GCGAGG               TTTATATACAATTAT 100 77
JC861_RS13390 NONE
JC861_RS13385 2821778 .. 2821793 -  -8.2  -4.40358   ATTTAGGGCATAAAA              CCCCGC AAAT GCGAGG               TTTCAGTTTATAAGC  82 33
JC861_RS13380 2821219 .. 2821235 -  -7.2  -5.21709   GCGTATATGAAAAAA              GGCCGC ACAGG GCGACC              TTTGGTAATTTATAT  90 51
JC861_RS13375 NONE
JC861_RS13370 2819846 .. 2819864 -  -9.5  -5.10461   TGCAGGCAATAAAAA             GCCCCGC GTTAT GCGAGGC             TGAAAATTTTATTCG 100 50
JC861_RS13365 NONE
JC861_RS13360 NONE
JC861_RS13355 NONE
JC861_RS13350 2818246 .. 2818266 -  -4.1  -2.76189   CAATCGATTTAACTA            TACCATAAC AGT ATTATGATA            ATGACATTGCATAAT  46 66
JC861_RS13345 2817551 .. 2817571 -  -9.7   -5.4833   TTATCGAATAAAAAA            GCCAGCTTA GTG TGAGCTGGC            TATATATAGAAAACA 100 78
JC861_RS13340 NONE
JC861_RS13335 2816325 .. 2816339 -  -5.7  -3.42364   ACCGAAGACAGAAGA               CAGGT AAGAG ACCTG               GTATTCAGGATTGCC  56 115
JC861_RS13325 NONE
JC861_RS13320 NONE
JC861_RS13315 NONE
JC861_RS13310 NONE
JC861_RS13305 NONE
JC861_RS13300 NONE
JC861_RS13295 2809396 .. 2809433 -  -9.1  -4.36914   GTTTCTCGTATAAAA   GACGTCACAATGCCTGC CATA GCTGACATCAGGACGTC    TGTATTAAAGGGAAG  86 42
JC861_RS13290 NONE
JC861_RS13285 NONE
JC861_RS13280 NONE
JC861_RS13275 NONE
JC861_RS13270 NONE
JC861_RS13265 NONE
JC861_RS13260 NONE
JC861_RS13255 2804665 .. 2804681 -  -7.9  -2.62184   GGCTTTTTGACAGGA              GCCACGC ATC ACGCGGC              CCCCACCGGTAAAAA  60 84
JC861_RS13250 2803847 .. 2803859 -  -9.1  -2.87931   GTTATTGTTCACACA                GACCG TGG CGGTC                AGTATTGCTCAGCAG  65 260
JC861_RS13240 2801416 .. 2801447 -    -8  -3.57651   GCCCACACCACACAA      CTCAGCACCGGATAG CCC CT-TCCGGGGCTTAG      TCACGGCATATTCAT  70 26
JC861_RS13235 NONE
JC861_RS13230 2799955 .. 2799982 -   -15  -3.12668   TAGTGTCAGAGCCAA        CAAAAAACCCGC CGGA GCGGGTCTTTTG         AGGATTAGCAAGAGT 100 47
JC861_RS13225 NONE
JC861_RS13220 NONE
JC861_RS13215 NONE
JC861_RS13210 NONE
JC861_RS13205 NONE
JC861_RS13200 2794242 .. 2794258 -  -2.9  -4.30719   TTTTTTCATAACAAA              GCCTCAC TCA GTGAAGG              TGATAATTAGTCGTT  59 53
JC861_RS13195 NONE
JC861_RS13190 2792737 .. 2792775 -   -14   -3.9344   AAGCTGAACAGGAAA   TTGCCATGCTGGAACGTA AAA TACGCCTCAACATGGCAA   CTGATGAAGACAAGG 100 119
JC861_RS13175 2790701 .. 2790717 -  -3.7  -3.52113   ACCTTGCCATAAAGA              TTGGTGT CTC ACAGCAA              CAGGTATCGCGCTAT  51 226
        yejK 2786433 .. 2786454 - -14.5  -3.73775   GGGACGCCGAGTAAA           TAACGCCGC TTTT GCGGCGTTA            TTTATTTCTGCTCTA 100 42
        rsuA NONE
JC861_RS13125 2781985 .. 2782013 - -12.5  -4.11404   CTGATATTACAGAAA       TGACCGGTCCGG CAAATT CCGGACCGG-CA        GAAGAGAAAGGAAAT 100 40
JC861_RS13120 2781092 .. 2781121 - -10.9  -4.68593   TGTATTATTTAAAAA       GAAAAAGCTTCCT TTTC AGGAAGCTTTTTT        TATATCTGCATTTTA 100 75
JC861_RS13105 2778684 .. 2778726 -  -2.1  -4.89054   GGCACAAAAAAAGAA GCGAAAACCG-GTATCGT GATGTGGT ACGTCACACGATTTTCAC CGGTTTCTCCGGTAT  66 67
JC861_RS13100 2778115 .. 2778133 -  -7.4    -5.055   GTAACGGTGAAAAAA             TCCGCATT CAT ATTGCGGA             ACGTCGTTATATGGG  91 144
        fruK 2774331 .. 2774384 - -13.1  -3.80461   GAATTTATTATGAAA GATAACCGGTTTGACGGCATCCCGC TGGT GCTGGAAACCGTGAATCCGGATATC TGGGCACAGGAAATT 100 74
JC861_RS13065 2771292 .. 2771331 - -13.6  -2.57344   CACCCGGCTTATAAT  TGCCTCCGCTGCCCGCCGG AAA CCGGCGG-CAGAAGAAACA  GATGCCGCATCAGCG  93 35
JC861_RS13060 2769616 .. 2769634 -  -9.6  -6.15717   TAAACATAAAAAAAA             CCTGACCA ACA TAGTCAGG             TTTTTTATCAATTTA 100 63
JC861_RS13055 NONE
JC861_RS13050 NONE
JC861_RS13045 2766235 .. 2766269 - -16.7  -3.64198   GCGGCATACAGATAA     TCATTCTCTGCGGAA ATATA TTCCGCAGAGAATAA     AAAAGAATATGTAAT 100 55
JC861_RS13040 2763990 .. 2764015 - -11.8  -5.60993   CCTGCCATAAAAAAA         TACGGCGCCC GGGAAA GGGCGCCGTT          TTTCGACACATAATA 100 57
JC861_RS13035 2762030 .. 2762056 - -15.2  -5.71712   TTGCATATAAAAAAA         CGGCGCACAG AATCAAA CTGTGCGCCG         TTTCCGGGATAAAGA 100 53
JC861_RS13030 NONE
         dld 2759259 .. 2759280 -  -9.5  -5.33921   AAATTAATGAAAAAA           TCCGGTTAC AGAC ATAACCGGA            TTTTGCAGATTTTTA 100 54
JC861_RS13020 2758843 .. 2758867 - -15.7  -3.06361   GAGTAAGCAGACAGA          CCGCCGGGAGC AGC GCTCCCGGCAA          TAATATTATCCCGCT 100 31
JC861_RS13010 2756766 .. 2756787 - -10.9  -6.11644   TCAGTCAAAAAAAAA           CCGCGAATG CTGC CATTCACGG            TTTCTGTGGTTCTGA 100 49
        rluC 2752004 .. 2752020 - -10.8  -5.64304   CAATATAAGAAAAAA              CCCGCG TTCGT CGCGGG              TTCTTTATAACGGGG 100 53
        yceD NONE
        rpmF NONE
        plsX NONE
JC861_RS12970 NONE
        fabD NONE
        fabG 2746288 .. 2746300 -  -4.8  -3.15027   ATTTCCTATCAAAAC                TCGC TATAT GCGA                TGGTTTTCGTAGTTT  51 145
        acpP 2745991 .. 2746014 - -12.4  -4.96996   GGGAAATAAAAGAAA          CAAGGCGGTC GGGT GACCGCCTGG           ACATGAGGGATGCTT 100 39
        fabF 2744681 .. 2744695 -  -8.5  -6.38039   CAGGTAAAAAAAAAA               GCGCC GTCAT GGCGC               TTTTTCCTCAGAAAA 100 46
        pabC 2743383 .. 2743401 -    -3  -3.86897   TTTACCGCTGACAAA             CAGTTGCA GCA TGCTTCTG             ACGGTCATATCCGGC  53 340
         tmk NONE
        holB NONE
JC861_RS12925 2740228 .. 2740238 -  -3.2  -2.84098   TCCTGTAATTAATCA                 GCCT GAC AGAC                 GGGTCCGTATTTACC  43 36
        hinT 2739824 .. 2739834 -  -3.2  -4.64591   CAATCACACATAAAA                 GACG TTT CATC                 ACAATTCTCCTGTCC  65 46
        lpoB NONE
JC861_RS12910 NONE
        nagZ NONE
        ycfP 2736796 .. 2736816 - -10.4  -5.42259   TGAGGCGTAAAAAAA            CCGCGCCT TCAGC AGACGCGG            TCATTTTACTGATAT 100 40
JC861_RS12895 2735056 .. 2735073 - -11.3  -5.28176   CTTACGGATAAAAAA             TGACGCC CAGA GGCGTCA              TTTTTAGCAGAGATC 100 44
JC861_RS12890 2733996 .. 2734006 -  -5.4  -3.86252   GCGGATGAAAGAGAA                 CCAT ATT ATGG                 TCGGCCGTGAATTTC  63 224
        lolC NONE
        lolD 2727214 .. 2727242 -  -4.6  -2.50935   AGCGCAGTCAGTAAT       GACAGCGGTAATG CATT CAT-AGCGCCGTC        TCCGGCTGTGCATTC  47 13
        lolE NONE
        cobB NONE
        pepT 2723675 .. 2723694 -   -10   -5.4833   TTATTTAATAAAAAA            GCCACCTC TATT AAGGTGGC             TTATTGATATTTAAT 100 56
JC861_RS12850 2722895 .. 2722914 -  -2.8  -3.14132   TGCCGCCGGTATTAA            CAGTTACT CGTA AGAAACCG             TATAATTAATAGTTG  44 9
JC861_RS12845 2721881 .. 2721912 -  -5.1  -2.63631   GTAACCCCCATACCA      GCCATTGCCTGCGG GTTAA CTGC-GGCAACAGC      ATTTTTTGTTGCGGG  49 293
JC861_RS20825 NONE
JC861_RS12835 2718677 .. 2718698 - -10.1  -4.96848   CCGTTCAGATAAAAA           TGCCACGTG ATAT CACGTGGCG            TTTTTTTTTACAGAT 100 33
         icd 2709180 .. 2709199 - -12.2  -5.27779   CTGAACAGTAAAAAA            CGGGAACT AATA AGTTCCCG             TTAATTATTTCACTG 100 50
JC861_RS12775 2705131 .. 2705141 -    -4  -3.21416   TACCCTGACCACCAA                 CTTT AAA AAAG                 CCAGGGATAAAACCG  47 328
JC861_RS12740 NONE
JC861_RS12735 2700453 .. 2700475 - -12.7  -3.05596   TATGGCGCGATCGAA           GCCGGGAGC CGTAT ACTCCCGGC           TTCACCCTTTCTGAG  93 27
JC861_RS12730 NONE
JC861_RS12725 NONE
JC861_RS12720 2699139 .. 2699150 -  -2.2  -3.53761   CAATTCGGGTGTAAA                GCAT CATC ACGC                 AGCCTCCCGTTCTTT  47 20
JC861_RS12715 2698730 .. 2698748 -  -8.1  -3.14132   CTCTCCGCTCATTAA             GCGCAGC CGTAT ACTGCGC             CTCACATCGCCAGAC  63 27
JC861_RS12710 2697916 .. 2697931 -  -4.6  -2.57067   TTAACAGGTAATTCA              TCAGGC CACC GCCGGA               ATCATCATCAGTGCC  48 10
JC861_RS12705 NONE
JC861_RS12700 2696360 .. 2696373 -  -8.1  -6.10295   TCAACATAAAAAAAA               CCCGT AAAA ACGGG                GGTTTCAGTTCATAA 100 84
        cspA NONE
JC861_RS20815 2695336 .. 2695353 -  -9.1   -5.4492   TAGAGATATAAAAAA             GCCCCAC CGAA GTGAGGC              TCATAATTCTTCAGT 100 367
JC861_RS12685 2692718 .. 2692739 -  -3.7  -4.88407   TCAGGCAATTAAAAA           TGCAGCATCA TAT TG-CGCCGCA           CAAAACAAGGCTGTA  76 67
JC861_RS12675 NONE
JC861_RS12670 NONE
JC861_RS12665 NONE
JC861_RS12660 2690185 .. 2690203 - -13.2  -4.24887   AATACAGGCAATAAA             TAGACCGC AGG GCGGTCTA             TTGAAGTGTTGCTGT 100 490
JC861_RS12655 2689726 .. 2689739 -  -9.5   -5.4505   TTCCCCAATAAAAAA               CCCGC CGGA GCGGG                TTATGTATTTGTTAC 100 37
JC861_RS12650 2689229 .. 2689247 -  -5.2  -3.06696   TCTCCTGTTAATACA             TGCTGGGG GAA CCCCAAAA             AAAAGTTTTCTAACC  52 131
JC861_RS12645 NONE
JC861_RS12640 NONE
JC861_RS12635 NONE
JC861_RS12630 NONE
JC861_RS12625 NONE
JC861_RS12620 2683703 .. 2683718 - -10.4   -4.0896   AAACCCTCCGGAAAA              GCGGCA TCTC TGCCGC               CGTAATTAATCAGCC  91 35
JC861_RS12615 NONE
JC861_RS12610 NONE
JC861_RS12605 NONE
JC861_RS12600 2682250 .. 2682263 -  -8.1  -5.71983   GTAAGCATAAAAAAA               GCTGC CGCA GCAGC                TTGTTGTTCAAGATT 100 44
JC861_RS12595 NONE
JC861_RS12590 NONE
JC861_RS12585 NONE
JC861_RS12580 NONE
JC861_RS12575 NONE
JC861_RS12570 NONE
JC861_RS12565 2675984 .. 2675997 -  -3.7  -5.42259   TCACCCGTAAAAAAA               GCCGC CGGA GCGGG                TCATATCAGTTGCTC  84 26
JC861_RS12560 NONE
JC861_RS12555 NONE
JC861_RS12550 NONE
JC861_RS12545 NONE
JC861_RS12540 2670920 .. 2670931 -  -7.2  -5.90981   TCAGACGAAAAAAAA                CCGC CGGA GCGG                 TTATTGTTATTATTC 100 35
JC861_RS12535 2668963 .. 2668975 -  -9.1  -2.87931   GTTATTGTTCACACA                GACCG TGG CGGTC                AGTATTGCTCAGCAG  65 260
JC861_RS12525 2666377 .. 2666389 -  -3.3  -3.04398   CTTCCCCTCCAAAAG                TGGAC ACA GTCCT                AAGCGAGGTTCTGGT  44 24
JC861_RS12515 2664737 .. 2664768 -    -6  -2.81888   CTGTAAACTTAATTA      CATGTGTTTGATGAT TGC ATCACCAAACTC-TG      AGCATTTCAGTAGTT  53 493
JC861_RS12490 2660397 .. 2660412 -    -9  -6.24157   ATGTATAAAAAAAAA              TCCCGT AAAT ACGGGA               TGTTAGCTGATAGGT 100 62
JC861_RS12485 2659586 .. 2659619 - -14.9  -3.21276   TTTCGGCTGATAACA     CAAAGCAGGA-AAAAC CAC GTTTTATCCTGCTTTG     TCAGCAATCTCAAAG 100 201
JC861_RS12470 2657500 .. 2657521 - -11.5  -2.52516   CCTTCCATTATTAAT           TTGCCCGGC AATA GCCGGGCTA            TTTTTTCTTTTCAAT  79 136
JC861_RS12465 2656828 .. 2656853 -  -6.9  -4.51174   TTAGTACAATTAAAA         GCCAGCTT-GCA ATA TGTTAAGCTGGC         ATTATAGTGTATTTG  76 114
JC861_RS12460 2656157 .. 2656186 - -13.1  -4.82901   CTGCGCGGACAAAAA       TTATAACC-CCCGT GAA ACGGGCGGTTATAA       TTCTGCTTATTGATC 100 45
JC861_RS12440 2653085 .. 2653096 -    -3  -4.51224   AATAGTAATAATAAA                GTAT ATGT ATAC                 TAAAAGTACCACGTA  63 51
JC861_RS12435 2652512 .. 2652525 -  -5.3  -3.19563   CATATACCAGCAATA               GCAAT CAAC ATTGC                CTTATGGAATCTATT  53 45
JC861_RS12430 NONE
JC861_RS20805 NONE
JC861_RS12425 NONE
JC861_RS12420 NONE
JC861_RS12415 NONE
JC861_RS12410 NONE
JC861_RS12405 2646186 .. 2646207 -  -4.5  -5.02476   ATACTCCTGAAAAAA           CACATACGT CAAA ACATATGTA            AATAAAAAACTATCC  77 343
JC861_RS12400 2645803 .. 2645826 -  -6.7  -5.54192   ATTAATTTAAAAAAA          TCAGCCGGA ACAACA TCCGGATGA           TGTTTTATCGGTTAT  91 30
JC861_RS12395 2644263 .. 2644275 -  -2.7  -4.69027   AAATGTAGTGAAAAA                TAACA TAC CGTTA                TTAACTGATAATACC  64 155
JC861_RS12390 2643694 .. 2643704 -  -5.4  -3.62354   CCTGCAAATCAAAGA                 TCAG ACG CTGA                 AAATTTGACATTGGT  59 116
JC861_RS12385 2643373 .. 2643393 - -10.4  -5.27938   AGTCTGAAACAAAAA            GCCACCGG ATAAA CCGATGGC            ATATAAGGGAAATTC 100 39
JC861_RS12380 2642830 .. 2642863 -  -2.5  -4.73912   ATAAAAACCATAAAA     GATAATT-CCCGATGA TAT TCAGCGGCCAATCATC     AGTAAATACGGGGTC  64 10
JC861_RS12375 2642491 .. 2642514 -  -7.5  -5.55855   CGTAAAAAAAGAAAA          GGCTCACTGA TGTGT TCAG-GAGCC          TTATTAATTCTGCTG  95 47
JC861_RS12370 2641251 .. 2641269 - -14.6  -5.00616   CCGGGCCGTAAAAAA             CCTCCCGT CAT ACGGGAGG             TTTTCCTTTCGTCTT 100 312
JC861_RS12350 NONE
JC861_RS12345 2637791 .. 2637815 - -15.7  -3.32159   TGACAGCAAACTTAA          GCGTGCCGGAC ACC GTCCGGCACGA          TTTCTCACTCCTGAT 100 30
JC861_RS20800 2636249 .. 2636273 - -10.8  -2.95448   ATGAACAGTGACAGA          TAAACGCCGG GGCCA CCAGCGTTTA          TCACATTATCCGACC  79 31
JC861_RS12320 2634171 .. 2634187 -  -4.4  -2.89191   TGACATGCTCATATA              CACTCC CTTGC AGAGTG              TTCCGTAAATATTAT  46 78
JC861_RS12315 NONE
JC861_RS12310 NONE
JC861_RS12305 NONE
JC861_RS12300 NONE
JC861_RS12295 2632372 .. 2632391 - -11.4  -5.43414   ATCAGATATAAAAAA            GCCCCGCT ATTT AGCGAGGC             GCTGTTTTTAGTATA 100 464
        dsdX NONE
        dsdA 2627646 .. 2627656 -  -8.2  -3.02639   AGCCGGAAATAATCA                 CCGG ATA CCGG                 AACCGGCATTTATAG  65 77
        mlaA 2625841 .. 2625861 - -14.1  -5.76633   GCATACATAAAAAAA            GTTCTGGTC AGT GACCAGAAC            TTTTTTTTATCTTTT 100 56
JC861_RS12250 2623799 .. 2623821 -  -9.8   -5.5074   GAAGGTAATAAAAAA           GGCCCCCG TATTTAC CGGAGGCC           TGAATTCAGTTTGCG 100 56
        fadI NONE
        fadJ 2620063 .. 2620077 -   -10  -2.63596   CGTCAGGGGAGATGA               GAGGCA TTC TGCCTC               AAATTAATCATAATT  71 130
        sixA 2619188 .. 2619198 -  -2.4  -5.06451   TATGAGCTGAAAAAA                 CTGC GGC GCGG                 GGATTATGTGCCGGA  74 303
        prmB NONE
        aroC 2616604 .. 2616624 - -11.1  -4.63932   TACCTGCCAATAAAA            TCCCGGGTA CAA TACCCGGGG            ACGCCAGTTTAAATC 100 39
JC861_RS12215 2615792 .. 2615802 -  -6.8  -4.52042   ATAAAAATTAAGAAA                 GCTG AGA CAGC                 CACGTACTGATAGTA  76 7
JC861_RS12210 2615216 .. 2615226 -  -6.8  -3.64703   CGTTTGTCAGGCAAA                 CGGA TCT TCCG                 GCCATGGAAATTGGT  65 6
JC861_RS12205 NONE
JC861_RS12200 2614315 .. 2614334 -  -4.2  -5.72622   GCCATAAATAAAAAA            GGCCGC ATACCGGA GCGACC             TTTTCTTTTTACGTG  90 56
JC861_RS12195 2613629 .. 2613656 - -17.2  -5.93809   TTTGCATAAAAAAAA        GGATCATCAGCA TTGC TGCTGATGATCC         ATGATCGTCTCTGCT 100 79
        fabB 2608815 .. 2608838 - -13.9  -5.09259   TACTGCAAAAGAAAA          TGCCCCGGT GATTAA ACCGGGGCA           TTTATTTGATAATCA 100 49
JC861_RS12175 2608422 .. 2608435 -  -9.5  -4.96848   GGCGGGATATAAAAA               CCGCC GGGT GGCGG                TTATTGTAATAAAAA 100 64
JC861_RS12165 NONE
        pdxB 2604546 .. 2604569 -   -11  -5.06414   TCTCCGGAACAAAAA          CTGCACCGCA TCAG TGCGGCACAG           TCAGAAAAAATGATG 100 62
JC861_RS12155 NONE
        truA NONE
JC861_RS12145 2601934 .. 2601955 -  -8.7  -3.73224   TTATCTGCCATTAAA           CCACATTGC TTAT GCACTGTGG            ATAAAAAACTGCTCA  75 47
        accD NONE
        folC 2599637 .. 2599647 -  -2.4  -2.64803   CGATTCTGAAATTTA                 CTGG CCA CCCG                 CACCTTCCTTCGCTA  40 12
        dedD 2598890 .. 2598922 -  -8.6  -4.64861   CTGTCCGAAAATAAA     TTGCGGCGA-AATAA AAAA TTATAATCGCCGCAA      AGAGTTAACTGATTT  91 73
        cvpA 2598261 .. 2598272 -  -2.2  -3.47383   ACGATACCAACAATA                CCAC ACAT GTAG                 TTTTTTCCTCATCAG  47 37
        purF NONE
JC861_RS12115 2596094 .. 2596131 -   -15  -3.21099   CCGGCGGACTATTAA   TGCAGATCCCGGCCGGT GATAA AACGGCCGGGAT-TGCA   GGTTACGGCTGTGCG 100 28
        yfcD 2594312 .. 2594328 - -12.3  -5.56264   TTTAAATATAAAAAA              GCCTGCA TAT TGCAGGC              TTTTCCGGTTTTTAT 100 47
JC861_RS12100 2591713 .. 2591737 - -17.1  -3.93398   AGCCACAGACAATAA          TCCCGGCCGGG TTT CCCCGCCGGGA          TTTTTTTACTGTACA 100 150
JC861_RS12085 2587394 .. 2587430 -  -9.4  -3.70925   CGATTAATAAAGGAA   GCAGTTATACCGCCCGC GGAA ACGGGCGG-AAAACAGC    GGCACTTACAGGTCA  78 31
JC861_RS12080 NONE
JC861_RS12075 NONE
JC861_RS12070 2583758 .. 2583768 -  -6.8  -3.96327   ATTCGTCAGGAGAAA                 CGGT TGC ACCG                 TCCGTGGTACAGAGG  68 336
        hexA 2580057 .. 2580079 - -16.3  -5.40625   AGAGGATACAAAAAA           GCCGGGGGA AATTA TCCCCCGGC           GGTGTGTCTGACTGT 100 79
JC861_RS12045 NONE
JC861_RS12040 2578275 .. 2578297 -  -3.4  -2.52896   TCAGGGTTCAATGGA           CGCAACACAT TGC AAATATTGCG           CCCGGTGGCCCGAAA  42 44
        nuoC NONE
        nuoE NONE
        nuoF 2574502 .. 2574516 - -11.4  -3.05046   GCATGCTTCCAAAAG               GCCTGC TAT GCAGGC               GTTAAACGAAAAATC  83 50
        nuoG NONE
        nuoH NONE
        nuoI NONE
        nuoJ NONE
        nuoK NONE
        nuoL 2567505 .. 2567523 -    -3   -3.1867   AGGGAAGTAAAATCA             GCCAGGGT AAT AGCATGGC             GCAATGTGTCCCTTA  46 42
        nuoM NONE
        nuoN 2564496 .. 2564515 - -10.6    -5.626   TATGGCATAAAAAAA            CCGGGCTG ACTG CGGCCCGG             TTTTTCTGTCAGAAC 100 46
JC861_RS11970 NONE
        menD 2558974 .. 2558987 -  -3.1  -3.28712   GCTGTGCCGCCAGAA               CCGTCA TTG TG-CGG               CCTCACGTACCAGTT  47 15
        menH NONE
        menB NONE
        menC NONE
        menE 2554928 .. 2554962 - -15.8  -2.80074   CGTGTGATAACATGA     CAAAACCGCTGCCGTC AGT GACCGCAGCGGTTTTT     TTATATGAACTCAGC 100 36
JC861_RS11935 2552590 .. 2552606 - -12.3  -5.71712   TCTTATATAAAAAAA              CCCGTTC AGT GAACGGG              TTTTTTGTTGTCTGC 100 51
JC861_RS11925 2550806 .. 2550851 -    -2  -4.50976   GCGGACATTATAAAA GAGAACCGCAACCACAAAA AGGGAGAGA TTATGCGGCTG-AGTTCTC CTTTATTCAGAATCA  60 54
JC861_RS11920 2550242 .. 2550291 -  -9.9  -5.40072   CGCCGGGTAAAAAAA CACAGCTGCCGGCA-CGGAAAATC GCA GAAATTCCGGTGCCGGCAGCAGAT CCGTCATGATTTATC 100 273
JC861_RS11905 2546986 .. 2547003 - -11.3  -5.31877   ACGCACGATAAAAAA             TACCCGC CGCG GCGGGTA              TTCAATTATGTATTT 100 39
JC861_RS11895 2545336 .. 2545346 -    -4  -2.89564   TTTTCACCTGACAGA                 TAAC AGG GTTA                 TTGTGTGCCGTATTT  46 23
JC861_RS11890 2544511 .. 2544530 - -10.7  -4.68593   CGCATGATGTAAAAA            GCCCGGT TCGCTG ACCGGGC             TTTTTTTTCGTTATT 100 184
        mgrB 2541345 .. 2541359 -  -4.2  -3.24879   GGGAAAAGGCAAAAC               TCAGCC CTT GTCTGA               CGGAATAAATTTCGT  51 11
JC861_RS11865 2539765 .. 2539781 - -13.7  -5.60689   TCAGACAATAAAAAA              CCGGGGA TTT TCCCCGG              TTTTTTATTGTCTGA 100 49
        cspE 2538320 .. 2538343 - -12.4  -5.49234   ACAGGCAATAAAAAA          CCCCATGCCC GCAA GGGCACAGGG           TCTGAATTTGCGTCA 100 132
        thiD 2537413 .. 2537426 -  -4.5  -3.08088   AAAGCGCGCAATATA               CACGA ATTA CCGTG                CGATATCACCACCAC  51 31
        rluF 2536391 .. 2536418 -  -9.8  -4.42238   GCAGGCGAACGAAAA        GCATGCGCGTCA TGGA TGACGCGCCTGA         GCTTACATGGATGTA 100 94
JC861_RS11825 2531664 .. 2531680 - -13.7  -5.29782   GACAGGGATAAAAAA              CGGCGGA ATA TCCGCCG              TTTATTGTTTTTCTG 100 58
JC861_RS11795 2521392 .. 2521419 -  -2.8  -2.74799   GACAACTTGGGAAAT        CTG-CCGACAT TTTAAGT ATGTCAGTCAG        GGCAGTGCAATATCT  42 56
JC861_RS11785 2520229 .. 2520248 - -13.6  -3.53779   CCGGTAAAACAGCAA            GGGCGGAT CATT ATCCGCCC             TTTTTCTTTCTGTCT 100 56
JC861_RS11755 2511733 .. 2511743 -  -2.4  -5.00884   ATTCCGCCCAAAAAA                 GGGG CAG CCTC                 AAAAGTCGGGCTGTC  71 168
         upp 2507325 .. 2507342 - -11.3  -5.79526   ATATGCCAAAAAAAA             GCCGACT ATCA AGTCGGC              TCATTAACTTATTTC 100 34
        uraA 2505954 .. 2505984 - -19.2  -4.03767   TGAATAACACAATAA       CACCGGAGAAGTAC TCA GTACTTCTCCGGTA       AAGTATTAATTGTCT 100 31
         hda 2504978 .. 2504992 -  -5.6  -4.36914   TGGCGCGGCACAAAA               CGGCTG TTC CAGCAG               GGCGCACTTTGCATG  70 86
JC861_RS11680 2496831 .. 2496860 - -17.9  -5.27779   TGTAACACCAAAAAA       CCCCGATAGCCGG TTGT CCGGTTATCGGGG        TCACTTCACTTCAGA 100 72
        dapA NONE
        bamC 2491809 .. 2491833 - -13.7  -5.75478   AACGACATAAAAAAA          TACCGGCCATT TAT AATGACCGGTA          TCAATAATTATTGTT 100 67
JC861_RS11650 2490567 .. 2490586 - -13.6  -4.66609   TAGCGGATGTAAAAA            CACCGGTC ATCA GACCGGTG             TTGCTTCATTTTCTT 100 15
JC861_RS11635 NONE
JC861_RS11630 2486705 .. 2486715 -  -8.2  -3.46144   ACAGGATTAATAATA                 GGCG TAT CGCC                 TGACGCAGATTATTC  71 140
JC861_RS11625 2485908 .. 2485939 -  -8.7   -3.6292   ATAAAGAGGCTTAAA      GCCGGTGATACGC GGGTCT GGTTATCACCGGC       AATGTATTCATTGAG  75 48
JC861_RS11620 2484875 .. 2484906 - -13.9   -4.0251   ACTATGATAATCAAA      CTCTGCCGGTTTT GCAGGG AAAACCGGCAGAA       CCATTTATTTCAGTG 100 30
JC861_RS11615 NONE
JC861_RS11610 2482265 .. 2482280 -  -4.6  -4.69464   AAAATACCTGAAAAA              CCGCAG GGAA CTGCCG               CCTCACCGCGACAAT  72 84
JC861_RS11600 2480801 .. 2480833 -   -17  -5.23292   GCAGAGAAAATAAAA      GCAGCCCGGTCGAT CTGAT ACCGGCCGGGCTGC      ATTCATTACGCTTCG 100 31
        vgrG NONE
JC861_RS11590 NONE
JC861_RS11585 NONE
JC861_RS11580 2475726 .. 2475765 -  -7.3   -2.7186   AAACTGCTCCAACCA GGTGATTT--TCCCTGCCC TTTT GGGCAGGAATTAAATCTCC  AGTATAAATATGATT  58 41
JC861_RS11575 2475196 .. 2475206 -  -2.6   -3.1733   TTCTTCACAAAATCA                 TAAT TTT ATTA                 TTTTTATTTTATAAA  44 29
JC861_RS11570 2474369 .. 2474390 - -10.9  -5.25699   ACTACATAATAAAAA           GGCCCGATA ATAT TATCAGGCC            CCGGAGTTTAGTCTT 100 193
        lpxL 2473307 .. 2473320 -  -2.4  -2.98823   TGTCCCGGAGAGATA               CATC TCCCCG GATG                GGTATAATGCGTATT  42 107
        mdlC 2470795 .. 2470821 - -10.1  -4.37658   AATCCGGTGACAAAA         CGGCGCCCTGT TCCGC ACAGAGAGCCG         CTCAGGCGACTTCCC  93 81
JC861_RS11555 2469802 .. 2469815 -  -8.1  -2.70268   CTGGAATGAAAAATT               TGCGG GTAT CCGCA                CTGTGAATGATGCAG  57 489
JC861_RS11535 2466927 .. 2466956 -  -4.5   -3.3573   GAAATTACGCCACAA       GAAAATATCCAG CTATATC CTGG-TATTTTC       ACAATCACGGGAGCG  51 434
JC861_RS11520 2463403 .. 2463456 -  -4.7  -2.55019   AATGGGAAAAATTAT CATTCTCG-TTGTCGATACCTGAGTA AAT TACTAAGGTATTGGCAAACGACATTG CTCACATTGCTTCCA  47 90
        htpX 2462253 .. 2462277 - -16.5  -5.28778   AGCAGGTATAAAAAA          GGCTGCAACGC AGA GCGTTACAGCC          TTTTTATTATCCGGA 100 46
JC861_RS11495 2458323 .. 2458348 -  -9.8  -5.60993   TTCCGGATAAAAAAA         TACCCCGTCAG CAATC CTG-CGGGGTA         TTTTTTCAGATAACT 100 45
JC861_RS11465 2452327 .. 2452346 -  -8.5  -4.04206   TCAGTGTCAGAGAAA            GCCCGGC ATTATA GCCGGAC             TTCCCGCCGGGTACG  77 464
JC861_RS11460 2450557 .. 2450581 -  -3.5  -3.66178   TGCCGGAACTCGAAA          TCCATACTAGC ACA GCAAATAAGGA          TTAATAGGTTTATGT  53 184
        thrS NONE
        infC 2447881 .. 2447898 - -14.1  -4.63486   ATCCGGCGAATAAAA             GCCGGGG TTGC CCCCGGC              ATTTATTACTTGGAT 100 48
        rpmI NONE
        rplT 2447203 .. 2447220 - -11.3  -4.34402   TGCCGGACAGCAAAA             GAGGGAG CAAG CTCCCTC              TTCTGTCTGAGCAAT 100 40
        pheS NONE
        pheT NONE
        ihfA 2443157 .. 2443174 - -11.3  -5.23292   CCACAGAAAAGAAAA             CGACCTC ATAC GAGGTCG              TTTCAGGTCTTACTC 100 35
        btuC NONE
JC861_RS11415 2441199 .. 2441209 -    -4  -3.09933   CCTGAATTGATTCAA                 TTGA CGC TCAA                 CACCAGGGCTTCGTT  49 105
        arnB NONE
        arnC NONE
        arnA NONE
        arnD NONE
        arnT NONE
        arnE NONE
        arnF 2433703 .. 2433723 -  -8.3  -3.61106   TTAATAAAACACTAA            GCCGTATTA TGA TTATACGGC            GGGTTTTTCTTTACT  73 17
        arnT NONE
JC861_RS11370 2431087 .. 2431106 -  -4.2  -4.53475   ACGCCATAAAAATAA            TACGCGCT GGTC AGCGGGCA             TCTGACGGAAAATAC  66 164
JC861_RS11355 2428800 .. 2428813 -  -6.7  -3.65522   GACGTACTGCAACAA               TCCGT ACTG ACGGA                AACCTATCAGGCAAA  63 95
        ppsA 2420009 .. 2420026 -  -9.1  -6.02345   GAATGATAAAAAAAA             GCCCGAA ACAA TCCGGGC              TTTTAATCATTTAAA 100 50
JC861_RS11305 NONE
JC861_RS11300 2414662 .. 2414704 - -14.3  -3.64198   CTTTTACAGAGAGAA GCCGGCGCAACGTGA-TTCC GGAT GAAATTCACACTGCACCGGC TGAAATGTTACTTAA 100 44
        sufA NONE
        sufB NONE
        sufC NONE
        sufD NONE
        sufS NONE
        sufE 2408693 .. 2408717 -  -9.2    -5.626   GATGGTATAAAAAAA          TACGTGGCCG TCTGC CGGCCACGCC          AGGTAATATATTATT 100 69
JC861_RS11265 2407529 .. 2407549 -  -6.1  -5.72616   ACCGACATAAAAAAA            CCGCCTC ACAAACG GAAGCGG            TTTTGTCTGTTACGG 100 56
JC861_RS11235 2402439 .. 2402465 - -10.3  -5.45652   ATCCGTAATAAAAAA        TCCGGT-CTGAT AATT ATCAGCACCGGA         TTTTTTTATCTGAAT 100 45
JC861_RS11220 2398235 .. 2398247 - -10.5  -3.06796   CGTTACCTGATTGAA                CGCGG TCA CCGCG                ATATCGCGGTCATTC  72 517
JC861_RS11200 2395906 .. 2395927 -  -5.9  -3.66732   GAATCAGTTTAATAA           TTACGGGTA ATTA TACCGGTAA            TTTTCAGGATTGTAT  61 104
JC861_RS11195 2395071 .. 2395090 -  -2.9  -4.46212   GTTTTTATTATAAAA            CAGAAGAC GGGAT GTCT-CTG            CCGGTCACCCGGGTG  65 275
JC861_RS11185 2393983 .. 2394004 -   -13  -3.57406   GCCTGAGCAGAAATA           CGTCCCGC CGGTTT GCGGGACG            TTATATTACTACTCA 100 62
JC861_RS11175 2392623 .. 2392647 - -18.6  -4.85822   ATCAGAAAGACAAAA          GCCCCGCAGG TTTAC CCTGCGGGGC          TTCAATAAATAGTAC 100 50
JC861_RS11170 2391739 .. 2391771 - -17.9   -3.2981   GACAGTAATCAGTAA      GAAAACGCCACCTCA GAA TGAGGTGGCGTTTTT      ATATCAGTTATCCGG 100 29
JC861_RS11155 2389735 .. 2389778 -  -2.4  -5.05606   CCCAATAAAAAGAAA CGCGGCACTATTGTGTTCATT AAC AGCGA-CGCAATATTGCTGCG TAACAAAAACAGTTC  68 422
        slyA 2389187 .. 2389206 - -12.2  -4.11216   GGTTTACCGGTAAAA            GGCGAAAC ACCC GTTTCGCC             TTTTTTATTACCTGA 100 43
        anmK NONE
        pdxH 2386496 .. 2386518 -  -6.3  -4.01888   AGGCTATAGCATAAA          GC-GGCACTC CGTG AAGTGCCAGC           AATTAAAATGATTTT  67 67
        tyrS 2385115 .. 2385132 - -11.3  -4.84527   CTGACAGATCAAAAA             GGGCAAC TTTC GTTGCCC              TTGTTTACCGTAAAC 100 43
        pdxY 2384119 .. 2384135 - -13.7   -5.4492   TACAGAGACAAAAAA              CGCCGGA TAA TCCGGCG              TTTTCTTTATGCTGA 100 59
JC861_RS11115 2382175 .. 2382197 - -13.5  -2.84807   CTGAAATAAAGCAAT           CAGCCTCTG TATAG CAGAGGCTG           TGTTTTCTGCACGTC  93 191
        pspA 2373985 .. 2374000 -  -3.2  -3.18681   CCTTAATGGTATTAA              TTCAGG AAAG CCTGTA               CCGACCTTATTCGCC  46 32
        pspB NONE
        pspC NONE
JC861_RS11060 NONE
JC861_RS11055 NONE
JC861_RS11050 2370643 .. 2370673 -  -9.1  -5.24129   TTTTTGTATAAAAAA      GCCGGATG-ACATC ACAA AATGCACATCCGGC       CGGGTTATCGGTTAC 100 37
        tyrR 2368713 .. 2368738 - -17.5  -5.03314   CGTATCTGTAAAAAA         CCCCGCTGCCG GTGA CGGCCGCGGGG          TTATTTTTTTATTGC 100 50
JC861_RS11035 2366330 .. 2366352 -  -2.7  -4.36914   CCGTTGTTCATAAAA           CAGCTGA TGAGTGTGT TCAGCCG           GAGTCTGCCGCGTTC  59 64
        zntB 2365122 .. 2365142 - -10.5  -6.06723   TCGGGCAAAAAAAAA            CCGATGTAT AAA ATACACCGG            CATGATAATGGTCAA 100 205
JC861_RS11005 NONE
JC861_RS11000 2360022 .. 2360058 -  -8.2  -4.87665   TGCTATGCAGAAAAA   TAACGGTGCTGAATCAT AATA AT-ATTCAGCACCGCTG    ATACCGGTTTATTTC 100 34
JC861_RS10990 2357986 .. 2358007 -  -3.7  -3.82097   CTTAAACTGACCAAA           CCGGCTGTTA TTT TAAC-GCCCG           CCCTTCTTTCGCACC  56 11
JC861_RS10985 2357660 .. 2357686 - -12.3  -4.39426   GATATTCTGAGAAAA         GAGTACGGCGG CAGCC CCGCCGTATTC         CGTTTTCACAGTTTA 100 31
JC861_RS10975 2355277 .. 2355293 -  -4.4  -2.65223   CAACCGTATTATAAC             GC-GCGT TTTG ACGCTGC              CGGAATAGCATCAAA  45 2
JC861_RS10970 2353892 .. 2353914 -  -6.3  -5.43621   AGAAATCAGAAAAAA           TCCCGCA ATAAAAAGG TGCGGGA           TTATATTTATTTATG  91 36
JC861_RS10965 NONE
JC861_RS10960 2353125 .. 2353149 - -15.8  -3.62046   TGACGCCGTCAAGAA          CAGCCGCATC CGTGT GATGCGGCTG          TTCTGTATCAATCTA 100 38
        fadR 2349866 .. 2349892 - -15.2  -5.55769   GCTGACAATAAAAAA         CCGGCGCAGT TTTGTTC ACTGCGCCGG         TTTTTTATTGTGTTC 100 49
JC861_RS10935 NONE
         alr NONE
        hypF 2343726 .. 2343742 -  -5.1  -4.19336   AATCACCGCAACAAA              TGTTCGC GGG GCGAATA              TATTACGGTGAATGA  65 98
JC861_RS10920 2342876 .. 2342901 - -13.3  -5.64274   TCAGCCATAAAAAAA         CTGCACCGGAC AACA GTCAGGTGCAG          TTCTGTTATACCACT 100 47
JC861_RS10915 2342128 .. 2342151 -   -11  -3.14463   AAGTGCGCGGATTAA          CCGCCCTATG GCAC CACAGGGCGA           CAAACCGTCCCATCT  79 113
        msrB 2337805 .. 2337815 -  -5.4  -2.78596   TACGTTTTTATCACA                 TCAG AAG CTGA                 ATCGTTTTTTCTGTC  50 74
JC861_RS10875 2337221 .. 2337247 -  -2.8  -3.29461   CAACTGCTGGCAGAA         CAGCACATCACG CAT CTCGCGGTGCTG         GGGATCGCCACAGAT  47 263
JC861_RS10855 NONE
        selD 2332013 .. 2332026 -  -6.7  -4.67607   TCGGCAATAAACAAA               CGCAT GTTT ATGCG                GTGACTTCAATCAGT  79 19
JC861_RS10845 2330029 .. 2330048 - -13.6  -3.67976   GTCAGCAATTTCAAA            TGTCCCGC CAAT GCGGGACA             CTTTTTATCCTTCTT 100 30
JC861_RS10835 2327416 .. 2327443 -  -4.8  -3.84633   GATGTCGAAAAAAAC        GTACTCAGCC ATGCCCTG GGCCGTGTAC         TGACACAACGTGTAT  58 332
        rssB 2324905 .. 2324923 -  -4.5  -2.76456   AAAGTCAGGCAATTA             TCCCTGA TGCGG TCCGGGA             GTCAGACTTAATTTA  49 4
        galU NONE
JC861_RS10805 NONE
JC861_RS10800 2321401 .. 2321416 - -10.4  -5.36441   GCCGGACAGAAAAAA              GGAGGC TTTC GCCTCC               TTTTCTATACTTATA 100 55
JC861_RS10790 2319763 .. 2319780 -  -9.1  -5.71712   GCGGATATAAAAAAA             CCGGACA ATGA CGTCCGG              CACTTTTTTGTATAA 100 59
JC861_RS10780 2315558 .. 2315574 - -15.1  -4.70659   GCTCAGATGTAAAAA              CGGGGCC ATT GGCCCCG              TTCTGATAATAATGA 100 50
JC861_RS10750 NONE
        oppA 2306311 .. 2306332 - -17.3  -2.99545   GGTACACACTACACA           GGCCGCCCT TCGC AGGGCGGCC            AACCGTCGGTATTAT 100 37
        oppB NONE
        oppC NONE
JC861_RS10730 NONE
        oppF 2302385 .. 2302401 - -10.8  -5.88471   GATGATGAAAAAAAA              GCGCCC TTACC GGGCGC              TTTGTCGTAAAAATA 100 62
JC861_RS10720 NONE
JC861_RS10715 2301244 .. 2301259 -  -6.8  -4.36914   GTTTCTGGCACAAAA              TCCGGC ATGT GCCGAA               GTGGTTATCGGCCTG  75 163
JC861_RS10700 2298993 .. 2299004 -  -4.4  -3.86634   ATAAGCAACTAATAA                TGAC AATG GTCA                 CTAGTGTAAATGCAA  57 103
JC861_RS10695 2298194 .. 2298218 -   -10  -5.29846   AAGCTGAAACAAAAA          CCCCGGCA TTTTTCAGG TGCCGGGG          TTTCTTTTTTATCAG 100 42
JC861_RS10670 2292633 .. 2292646 -  -3.7  -5.21709   CGGGACAGGAAAAAA               CCGGC AGCG GCCTG                GGGTTATCTATCGTG  84 114
JC861_RS10655 2290096 .. 2290117 - -10.2  -5.03314   CGGATTGGTAAAAAA           TCAGGCCA ATAATA TGGCCTGA            TTATCCGGTGTGTTT 100 51
        ompW 2287330 .. 2287351 - -13.1   -4.9792   TACCGGATATAAAAA           TGGCGCAAT TATT ATTGCGCCA            TTTTTTATGATGCTG 100 54
JC861_RS10600 NONE
JC861_RS10595 2278380 .. 2278409 -    -3  -3.88001   CGTCATAAAAATCAA      CCGCAGCATTATAC ACAG GT-TAATGC-ACGG       CGCTAACGCATTTTA  53 62
        rluB 2277319 .. 2277343 - -17.3  -5.40474   ATCCCTGTAAAAAAA          CGTCCTGTGTT TTG AACACAGGACG          TTTATAAACGCGGAT 100 85
JC861_RS10585 2276233 .. 2276243 -  -8.2  -3.53761   CAACCGGGCCGCAAA                 GCCG GAC CGGC                 GGAGTAACAGAAGAC  71 48
        sohB 2274197 .. 2274220 - -15.4  -3.94402   ATAATCTGCAAAGAA          TAACGGCAGC TTTC GCTGCCGTTA           TTTATACTGCGCCGG 100 41
        topA 2270959 .. 2270982 - -16.8  -5.60993   TCCGGCATAAAAAAA          CCGGTCAGGA AAAT TCCTGACCGG           TTTTTATTATTGTGA 100 64
        cysB NONE
JC861_RS10555 2269134 .. 2269168 -  -2.2  -3.35597   TGTACGGGTTAAACA     GGTATCTTCCTTATTA TTT TCATTATAAAGATACC     ATATTCCCGTATTCT  45 105
        acnA 2266382 .. 2266401 - -11.4  -5.00027   AGTAAAAACAGAAAA            GCGCGGCA AAAA TACCGCGC             TTTGTTTTCTTATCC 100 53
JC861_RS10540 2264772 .. 2264782 -  -8.2  -2.69468   TATCCGCACAGATTA                 CCGG CAA CCGG                 TTTCACACGGCCCAT  63 53
JC861_RS10535 NONE
        lapB 2263134 .. 2263146 -  -7.7  -2.75536   AAATTACGGCTAAAT                GTGAC GTT GTCAC                TGACCGTCCAGCCCT  61 22
        pyrF 2262338 .. 2262348 -  -3.2  -3.23393   GTCCATCTTATAATA                 CTCC CAC AGAG                 GCATTAATTGCCTGC  46 7
        yciH 2261968 .. 2262000 - -16.3  -3.55563   ACCGGAGTCGCTAAA      TACACAGGGCGTCCG CAA CGGACGCCCTGCTCA      CTGATCAGCCACCGG 100 30
JC861_RS10475 NONE
JC861_RS10470 NONE
JC861_RS10465 2249444 .. 2249466 - -10.6  -5.24129   TTCCGTTACAAAAAA           GGCCTGATAT TTT ATGTCAGGCC           TTTTTTATTTTCTGA 100 41
        fumC 2243833 .. 2243851 - -14.6  -4.68424   GAAGTGATGTAAAAA             CGGAGCCA TCA TGGCTCCG             TTCCTGCTATATACA 100 62
JC861_RS10430 2239372 .. 2239384 -  -9.1  -2.96274   CTCCTGATAATCAGA                TCCGC TCA GCGGA                ACACATTGTTTTTCA  68 18
JC861_RS10425 2238277 .. 2238309 -  -9.9  -4.08216   GGACGCCCGCGAAAA      CCTAATCCCGGAAAC TCC GTTTCCCGGACCAGA      TGAGCATCCATCAGT  88 297
        bioD 2236379 .. 2236396 - -11.3  -4.77036   TTTGACCATGAAAAA             GGGCTGA TTTA TCAGCCC              TTTTGTATTTGACCG 100 46
JC861_RS10395 2234176 .. 2234195 - -12.2  -3.99236   CGCAGAAAAAACGAA            GCGGATAC TCCG GTATCCGC             TTTCTGTTTTATTCT 100 34
        prpR NONE
        alkB NONE
         ada NONE
JC861_RS10360 2225648 .. 2225683 -  -8.4   -4.7373   TCACTGGAGGAAAAA    CTGGCG-GCAGATTTAC AGC GTAAACCTGCACATCAG    AAACCGGCTCTGCAA  93 145
JC861_RS10335 2220453 .. 2220465 -  -9.1  -2.54634   TTTTACATCAGGAAT                GGCAG GAA CTGCC                GCAGTGGCAGACACC  62 421
JC861_RS10315 2217674 .. 2217686 -  -7.7  -5.71712   TCGCACAGAAAAAAA                CTGAC AAC GTCAG                CTGGTTGCAGGCATC 100 521
JC861_RS10300 NONE
JC861_RS10295 2213556 .. 2213575 -  -7.2  -3.27298   TCTGTTAATCAGTAA            TGCCG-TCA GCC TGACCGGCA            ACAGTTATGCCCATT  57 376
JC861_RS10275 NONE
JC861_RS10270 NONE
JC861_RS10265 2208038 .. 2208051 -  -6.7  -2.82834   GATTGTATTATTAGA               GGAAC AGCA GTTCC                GAGATATCAGTGATA  53 203
JC861_RS10240 2203919 .. 2203939 -  -6.7  -2.62515   AACCGCCTGACAGCA            GCCACCTGG TTG CCCGGCAGC            TGACCACTCAGACCT  52 447
JC861_RS10230 NONE
JC861_RS10225 2201425 .. 2201435 -  -4.6   -5.1485   GAATGAAGAGAAAAA                 CGCA CTG CGCG                 ATCCGGATTCCGCCG  81 218
JC861_RS10215 2199796 .. 2199812 -  -9.3   -3.2614   GATCCCGCAGATGAA              CGGCCGG GTG CTGGCCG              TATGGGGTGCGGAGG  67 312
JC861_RS10195 2194924 .. 2194964 - -11.2  -4.40572   ATAACCTGCATAAAA GACA-AGCAGCCTGTGGTG ATCA CACCACAGGCTGCCCTGAT  ATCTGACGTGTTAAT 100 45
         pip 2193473 .. 2193488 -  -7.6  -4.93365   GCTTATAATGAAAAA              GCAGAT CGTT ATCTGC               ACTTCTCTGATGCTC  90 428
JC861_RS10180 2191481 .. 2191494 -  -2.4  -3.01712   TTTTTTTTTTTAATA               CATC CGTAAT GATG                AGTTACTGACGGGAG  42 28
JC861_RS10175 2190926 .. 2190959 -  -9.6  -4.25104   CTCCCTGCAGGAAAA     TATCATGGCGGCAC TGGCCT GTTCCGCCATGGTA      CTGATACTGGTTTCC  82 56
JC861_RS10165 NONE
JC861_RS10160 2188274 .. 2188297 - -11.6  -2.50016   TGGTATCAGGAATAT          CCGCCGCCGG AAAC CCGGCGGCAT           CCGGGGTAAATGACT  79 39
JC861_RS10155 NONE
JC861_RS10150 2184312 .. 2184323 -  -4.4  -4.11748   TGGATAAATAAAATA                TCTG TCCG CAGA                 CTCAGGATTTGTTCA  61 317
JC861_RS10135 2181263 .. 2181281 - -14.6  -5.61596   ATCCGGATAAAAAAA             TGCCGCAC AGC GTGCGGCA             ATTAAATCATTGAGG 100 70
JC861_RS10120 2177050 .. 2177068 -    -3  -4.33258   ATTCCGAAAGAGAAA             GTTCTGCC GAT GGCGGAAT             TTTTACTGGATGATG  62 504
JC861_RS10110 NONE
JC861_RS10105 2175669 .. 2175691 -  -5.7  -3.64822   ACGCCCGCAGGGAAA          GAAT-GCATC AGCA GATGCTATTC           ATAGAGTGCATACAC  61 20
JC861_RS10100 2174588 .. 2174615 - -11.3  -4.13571   GGAAACAAAACAGAA        CGGCCCGGT AGTAATAATG ACCGGGCCG         GAATAATGTGACCGG 100 502
        vgrG NONE
JC861_RS10090 NONE
JC861_RS10085 NONE
JC861_RS10080 NONE
JC861_RS10075 NONE
JC861_RS10070 2167724 .. 2167747 - -11.6  -2.64759   TAACCGGAATAATAT          GCCGGACGCC CGCT GGCGGCCAGC           TCTCATGCAATCCGT  80 106
JC861_RS10065 2166578 .. 2166594 -  -6.5   -5.5353   GAGAGCAATAAAAAA              CCCGC TCAGGCG GCGGG              TTCTGAATACAGCAC  91 125
JC861_RS10060 2165772 .. 2165797 - -10.5  -2.72661   GAGGACGGTGAAGCA         TTCAATGCCAC CGTG GCGGCACTGAA          AGCGTATCCGGAATA  70 271
        sugE 2164812 .. 2164830 - -12.4   -5.4505   TGCTGTAATAAAAAA             GCCGGCAA TAT CTGCCGGC             TCAGGCCGTTGTCAA 100 137
JC861_RS10030 2161069 .. 2161080 -  -2.2  -3.27475   TCCGCGATCATAACA                CACG ACAT CATG                 CATTAACGTTTTCTG  45 28
JC861_RS10025 2160492 .. 2160528 - -24.1  -4.83615   CACTGCGGACAAAAA    TAAAACGGCAGATGTCA CTG TGACATCTGCCGTTTTA    TAACGATATTAACTA 100 52
JC861_RS10020 2158724 .. 2158740 -  -6.7  -2.59927   AACTTTTATAACGCA              TATTAAG CCT CTTAATA              GTATCAACGTAAGTA  56 50
JC861_RS10015 2158187 .. 2158215 - -11.8   -5.4505   CGTGTGAATAAAAAA       CGGGTTTGC-CCC TTCC GGATGCAAACCCG        CTGTTAACCTGCTGA 100 46
JC861_RS10010 NONE
        dmsB NONE
JC861_RS10000 2153960 .. 2153977 - -11.3  -4.18018   TTCTCTGACGTAAAA             GGCCTTC ATCC GAAGGCC              TTTTCTGTATCACTT 100 39
JC861_RS09955 2143587 .. 2143603 - -12.3  -4.16016   TGACCCGTGAATAAA              TGCGGAG TTT CTCCGCA              TTTATGTCCGTGCGG 100 27
JC861_RS09945 NONE
JC861_RS09940 2140468 .. 2140478 -  -3.2   -4.3739   GATGGCTGGACAAAA                 CTGA CGG CCAG                 TGTGCTGGCGGTTGC  62 292
JC861_RS09920 2138048 .. 2138075 - -13.4  -4.10161   TATCAGGCGGGAAAA        CAGATCCGGGAG TGAT CCCCCGGATCAG         GTCAGTTATTCAACA 100 31
        yegD 2136574 .. 2136585 -  -5.8  -3.07962   GGCGATACTCTAATA                GACC GACC GGTC                 TGTTGCAAGTTTATT  55 36
JC861_RS09910 2135906 .. 2135917 -  -2.2  -2.78596   TATCTCCGGATTAGA                CCAG TCGA CTAG                 TGTTCAGATAAATAA  41 70
JC861_RS09905 2134738 .. 2134765 - -12.1  -5.00616   TCCGGCCGTAAAAAA        TAACCCGGC-GC GGTTT GCTGCCGGGTTA        TTGTCTGTTATGCCA 100 33
JC861_RS09850 2121386 .. 2121398 -  -2.7  -5.44721   ATTACGGTAAAAAAA                TCAAC TCC GTTAA                GATTATGACCCGGCG  80 45
JC861_RS09840 NONE
JC861_RS09835 2118266 .. 2118294 -  -9.6  -3.31231   AAATAACTGATAATA        CCGGCTTCCG TCATTTCTC CGGAAACCGG        TTTTCCGGTTAAATC  74 39
JC861_RS09805 2113485 .. 2113500 -  -6.8  -4.55287   TGTATTGAGATAAAA              CACCCG TCAG CAGGTG               TTTTATCTTGTCAGG  76 51
JC861_RS20770 2112946 .. 2112956 -  -6.8  -5.30199   AAAAACGAATAAAAA                 GGCT CTG AGCC                 ATTCCGGTAAAGTGG  89 115
JC861_RS09770 NONE
JC861_RS09765 2104043 .. 2104060 -  -2.5  -2.79501   GATACCCTGATTACA             TCGGCGG ATTC CCCCCGG              AAAATCGCTATCCTC  39 181
        malX 2093545 .. 2093564 - -13.6  -5.27335   CTCCGGAAAGAAAAA            CCGCACTG TTTA CAGTGCGG             TGTAAGTTATCAGGC 100 35
JC861_RS09710 2092315 .. 2092339 - -12.8   -3.8613   GGCAAACACGAATAA          CCGGGGCGCA GAGAA TGCGCCCGGG          TCGTGCAAAAAATCA 100 38
JC861_RS09690 2088776 .. 2088809 -   -11  -2.68381   GAATGTAGGAAATAT     TCGCACCAGACCGA AATAAA CCGGTCTGATGCGT      TTTACGGCAGCCAAA  76 63
        uspE 2087710 .. 2087729 - -13.6   -5.1417   GGATAAAATGAAAAA            GGCGGGAA TTAT TTCCCGCC             TTTTTTATGCATAAT 100 52
        ydgH 2083370 .. 2083386 - -10.9  -5.66684   GAAGCTATAAAAAAA              GCGTATC AGA GATACGC              TTTTTTCCGGTGAAC 100 54
JC861_RS09665 2081725 .. 2081741 - -13.7  -5.40625   AGAGGAGACAAAAAA              GCCGGTC TGT GACCGGC              TCCTGTTTTCACGGT 100 42
JC861_RS09655 2076668 .. 2076686 - -13.8  -5.81412   CGGATGTAAAAAAAA             GCGCCGGA TGA CCCGGCGC             GGAACAAGGATGATT 100 77
JC861_RS09635 2072273 .. 2072302 - -11.6  -5.40072   TTTTTTGTAAAAAAA       TTGCCGGAATTC AGGATA AAATTCCGGCAA        TTAAATTGTAATGTT 100 55
JC861_RS09630 2071317 .. 2071338 - -11.7  -5.42514   TTATAAATGAAAAAA           TCAAACACC CGGA GGTGTTTGA            TTTTAATTTTCGTCA 100 129
JC861_RS09625 2070885 .. 2070895 -  -5.4  -3.72576   TGGCCGGGGAGTAAA                 TCAG TCG CTGA                 TATCATGACGGAACA  59 15
        norR 2065832 .. 2065844 -  -4.8  -3.34984   ACATTTGTCAAAAAG                TCCC GTCCG GGGA                TTATTTCAGCCCCAG  53 26
JC861_RS09600 2063662 .. 2063678 - -13.7  -3.55622   GTCAACGGCCTGAAA              TCCCCGC CGG GCGGGGA              TTTTTTATATTATGT 100 43
JC861_RS09590 NONE
JC861_RS09585 2060522 .. 2060535 -  -3.7   -3.9122   GAGTCTGTCAAATAA               CGGGC GTTT GCCGG                TGTGGTAACTGAGCT  58 53
JC861_RS09575 NONE
JC861_RS09570 2058605 .. 2058641 - -19.7  -2.57781   TAAACAGGTAATTTA    TGAAAACCACCGGACTC AAC AAATCCGGTGGTTTTCA    TTTTCACGACATTAT 100 51
        minC NONE
        minD NONE
        minE 2049898 .. 2049920 - -16.3  -5.25893   ATAGACAGCAAAAAA           CACGGCGGG ATATA CCCGCCGTG           TTATCAGTCACAGTA 100 49
JC861_RS09485 2039373 .. 2039399 - -13.9  -3.28924   GAGCTGGGTTTATAA         TACCCTGCATA TTCCT TATGCAGGGTA         TTATCTGATATTACA 100 41
JC861_RS09480 NONE
JC861_RS09475 NONE
JC861_RS09470 NONE
JC861_RS09465 2033786 .. 2033822 - -18.2  -4.16301   AATGCAGATAAATAA    TAAAATCCCGGCAGAG GTTTT CTCTGCCGGGATTTTT    ATTTATGACGATTTT 100 61
JC861_RS09460 NONE
JC861_RS09455 2030335 .. 2030367 - -13.6  -4.37067   GAAACAGTATTAAAA      GGTCTGATTTCAGT TCAGT ACAGAAATCAGACC      CCGGTCAATATCTGT 100 43
JC861_RS09440 2026892 .. 2026919 -  -9.8  -4.64464   CAAAGGAAACGAAAA        GCATGCGCGTCA TGGA TGACGCGCCTGA         GCGCACAGGGATGTG 100 116
        lsrA NONE
        lsrC NONE
        lsrD NONE
        lsrB 2019202 .. 2019222 -   -14  -3.34398   TCCCCTGGTTAAACA            GGCGCGGA GGGGG TCCGCGCC            ACTGGTTAAATCAGC 100 48
        lsrF NONE
        lsrG 2017950 .. 2017971 - -11.6  -5.50925   AATCAATACAAAAAA           GTGACCGC CGTTAT GCGGTCAC            TTAACAGATCAAATA 100 49
JC861_RS09390 2016323 .. 2016351 - -13.3  -3.63298   GCGAAGTAAAGAACA        GGTATTACCCGAT AAA ATCGGGTAATACA        ATTAACATAATTGTA 100 49
         pyk 2003144 .. 2003165 - -15.9   -4.1552   TAGCTTGCTAATAAA           CCGCCTGTC ACCA GACAGGCGG            TTTCAGTTTTGTCTG 100 48
JC861_RS09320 2000090 .. 2000122 -  -7.7  -2.88228   AAAAAGAAATAACAG      TTACAGCTTCTGATG GAT CTTCAGTAGCCGCAA      TAACATACGTGGCTA  58 371
        znuC NONE
        znuB 1993957 .. 1993980 -  -8.9  -4.63527   GTACTACTGCAAAAA          GCCCTGACA GCTCAA TATCAGGGC           TTTTTCTGTATATGA 100 60
JC861_RS09235 NONE
        cmoA NONE
        cmoB 1984021 .. 1984037 -  -5.1  -2.91264   TTTTGGAGGTATATA              CCCTG TAAATAT CAGGG              TATATACCTATTTGT  52 46
JC861_RS09220 1981718 .. 1981736 - -14.6  -4.98531   CGGTTAAATCAAAAA             CGCCCTCA TAT TGAGGGCG             TTTTGCTGTCAGAAG 100 34
        argS 1978272 .. 1978287 -    -9  -5.64304   GAAGACAATAAAAAA              GGAACC GGAT GGTTCC               TTTTTTGCAGAAATA 100 60
JC861_RS09195 1976413 .. 1976425 -  -3.4   -4.3534   CTGCAATCAGCAAAA                GCAA GAAAA TTGC                AGAAAAACAGTATAG  62 115
        mdtH 1971016 .. 1971030 -  -2.8  -3.53012   CTGTGCTGCGGCAAA               TCCAAA ATA TCCGGA               TCAATTTAATACGGC  48 26
JC861_RS09170 1970180 .. 1970203 - -11.2  -3.65415   TCAATCACAAATTAA          TTTTATCTGC GGCA GCAGATAAAA           CAGCGTTTCATTCTT  84 231
JC861_RS09165 1968564 .. 1968575 -  -5.8  -3.25102   ATCTCATGCACAACA                CGGT TTTT ACCG                 CACACTGGCGATCCT  54 173
JC861_RS09150 1966630 .. 1966665 - -17.8  -3.20193   AGAAAAGACAGAAAC    GAAAAAAGCCTGCTGA TTGC TCAGCAGGCTCTTCTC     TTAATATGGCGGTGA 100 32
        dauA 1964628 .. 1964648 -    -6  -4.55295   TGCCGGATAAAGAAA            CGGCGGAC TCTGC GCTCGCCG            CTGTATTCAGTATAA  73 58
JC861_RS09140 1963668 .. 1963680 -  -2.6   -3.8679   GATAAAACACTGAAA                CGCA TCAAC CGCG                GTCATGATTTTGCCT  54 495
        lolB NONE
        ispE 1956462 .. 1956473 -  -5.8  -2.79492   TTGTGAACCTGAAAG                CGTC CGGG GACG                 GAATCAGGGGCAATT  53 39
         prs 1955410 .. 1955429 - -12.2   -5.4505   CCTGCCAACAAAAAA            CCCGTTGT GTTC ACAACGGG             TTCAGACACGCAATG 100 59
         pth 1954098 .. 1954116 -  -8.8  -3.18433   ACCTTAAAAATGACA             GCAGACCA AAA CGGCCTGC             AAGCACGTTAAATAA  69 89
        ychF 1952902 .. 1952919 - -11.3  -5.08601   GTATCCCAATAAAAA             TCCACGC AATA GCGTGGA              TTTTATGGTTTTTTA 100 88
        yedE NONE
JC861_RS09060 1948849 .. 1948870 -   -13  -5.19212   AGCAGGATCAAAAAA           GGCGGCAG ATCCGG CTGCCGCC            TTACCATCCATATCA 100 60
JC861_RS09050 1946567 .. 1946602 -  -2.8  -4.85599   TTGATGTGATAAAAA    TCACATAATAAAAACGA TAA CCCCTTTTATT-TGTGA    AATAAAAAAACAAAA  67 105
JC861_RS09045 1945162 .. 1945181 - -13.6  -3.23869   TAGCAGCCCATAACA            GGGCAGCA CGTA TGCTGCCC             TTTTTAACAAAAAAT 100 50
JC861_RS09040 NONE
JC861_RS09035 NONE
JC861_RS09030 1941709 .. 1941726 -  -2.6  -2.64622   ATAGACACTCATAAT             CCGCTC CCTTAT GACCGG              GCTTTCTGCAATGCA  41 16
JC861_RS09025 1940032 .. 1940063 - -12.3  -3.99374   GGGCATCAATAATAA      CAGGTTCCGGTGA CTGAAT CCGCCGGAACCTG       TTTATTATCAGACTT 100 33
JC861_RS08995 1933249 .. 1933267 - -14.6  -5.77988   ACAGAGATAAAAAAA             CGGGCACT GAA AGTGCCCG             TTTTGCCGAAAACAG 100 48
JC861_RS08985 NONE
        cydB NONE
JC861_RS08975 1929079 .. 1929106 - -17.1   -5.5943   AAATTATTAAAAAAA        GGCACACCGCA TGGGGG TGCGGTGTGCC         GGGCAATGCAGCTGA 100 92
JC861_RS08970 1928113 .. 1928137 - -15.7  -2.65112   AACTGATTCACAGCA          GCTGCGGCAGA GAA CCCGCCGCAGC          CTGTTTATCATCAGT 100 36
JC861_RS08955 1925518 .. 1925530 -  -3.3  -3.72576   CTGGCGGTTATTAAA                CTGTC GCA GTCAG                GTTTTACCCCTGAAC  53 150
JC861_RS08940 1923505 .. 1923523 -  -8.1  -3.57263   AGCGGCACGGGCAAA             GGCGGCA GACGT TACCGCC             TGAAGGCAGATGTTA  68 55
JC861_RS08930 1922528 .. 1922545 -  -9.1  -3.79787   TGACAGGAACGGAAA             GGTCCGC AAAC ACGGACC              TTTTTTGCAGAAGAC  78 45
JC861_RS08910 1920000 .. 1920041 - -16.1  -5.69473   TACAGTATAAAAAAA GTCCGCACGTTGT-ATAACA GAA TGCTATAACAGCGTGCGGAC AGAAACGAAAATAAA 100 149
        hemB 1914046 .. 1914057 -  -4.4  -3.55203   AAAAGTCGCTGTAAA                CACA TCCG TGTG                 CGCTCAGGCGCGTCA  52 110
JC861_RS08845 1906090 .. 1906107 - -12.7  -4.70879   GTTAAACCGTAAAAA             GGCGTGC AACT GCACGCC              TTTGTTATATTCAGC 100 36
        pabB NONE
JC861_RS08825 1903216 .. 1903229 -  -2.3  -4.82901   GCTTTCGGATAAAAA               TCGGG CATA CCTGA                TGAAAAAAAACAGGG  66 75
JC861_RS08820 1901659 .. 1901682 -   -14  -5.08824   GCTTCAGGTAAAAAA          TATCCCTGCA ATGT TGCAGGGATA           TTAATGTTACCGAAT 100 67
        manX 1900213 .. 1900229 -  -2.3  -2.70932   TTTCTCCTTTAACCA              GTCATTT TGC AAACAAC              AAATTTTGTATTGAG  40 53
JC861_RS08810 NONE
JC861_RS08805 1898436 .. 1898453 - -12.7  -5.67283   AAGTGAAACAAAAAA             CGGGAGG CGAG CCTCCCG              TTTAAACTAACATAT 100 97
JC861_RS08800 1897887 .. 1897914 -  -9.4  -4.91084   TATTTAATAAGAAAA        TAAAGACTAATA TTAT CATTAGTCTTTA         TTTCTGTAGGGGGAT 100 56
        mntP 1896969 .. 1896992 - -12.4  -4.46215   CAGATTCAAAAACAA          CAAGACCCGC CGGA GCGGGTCATG           AAAACGTATCACCAC 100 47
JC861_RS08785 1894954 .. 1894993 -  -2.3  -3.06515   TCTGACGGGTAAAAC  TGTATTCTGCTGTGAACA AAAAA TATTCACAGCAG-ATTTA  TCCGATTAGCGGGTC  42 39
JC861_RS08780 1894112 .. 1894141 - -12.3  -4.46212   GGCGGGACGAGAAAA       TAAAACAGTACGG CGAA CCGTACTGTTTTG        GTGAATAAATAAGAG 100 49
JC861_RS08775 1892581 .. 1892625 -  -5.1  -3.21962   ATATTATTAATGTAA TGGCTGCCGGCACAGAATA GGAAAATGG TAT-CCG-GCCGGCAGCCT GTGTTACTTTTAGCT  53 46
JC861_RS20735 1889274 .. 1889299 -   -12  -5.99154   CAGGAAATAAAAAAA         TCCGGCAATA AATAAG TATTGCCGGA          TAGTATCAGATAATT 100 50
        xseA 1879234 .. 1879252 -  -5.8  -3.07935   ACCGGATCTACGCAA             CCGGCGGC AGT GCGGGCGG             GTTGCTGATGGGAGC  53 512
JC861_RS08730 1876547 .. 1876565 -  -6.7  -2.91276   GTTTGCCGGAGAAAT            CACC-CGG CGGT CCGTGGTG             CGCCGTTACGGGGTT  54 389
JC861_RS08720 1875350 .. 1875368 -  -3.8  -3.53012   CTCTCTCTCTGTAAA             TTCGCTCT GTA AAAGCGGA             TTTCAGTATAGCATT  51 111
JC861_RS08715 NONE
JC861_RS08710 NONE
JC861_RS08705 1872600 .. 1872622 - -14.9  -3.06509   TGGTAAACAAGGAGA           TCCGCGCAG GGAAA CTGCGCGGA           TAGTGAGAAGTTATT 100 36
JC861_RS08690 1870811 .. 1870825 -  -5.6  -3.14132   GTTTTTCCTTAGTAA               GCCCGT TGT ACCGGC               ATCAGTGCGTGCCGG  55 138
JC861_RS08685 1870184 .. 1870211 -   -15  -4.35095   AAAAAAAGGGGAAAA        TGGCGC-GGCAAA TGA TTTGCCCGCGCCA        CCGGAAGCGGTTAAT 100 36
JC861_RS08680 1868713 .. 1868734 - -10.1  -3.72893   GATTCTGGGACGAAA           CTCCACCCC GGAA GAGGCGGAG            TTTCTGTTACAGCCC  79 32
        yddG 1867148 .. 1867158 -    -4  -4.23213   CTGACAGGCAACAAA                 CAAT AAC ATTG                 GCGCTAATTTAGCAT  61 74
JC861_RS08665 1866051 .. 1866063 -  -3.3  -2.92091   ACAGCCAGGCACAGA                CAGGA GCG TCCGG                CAGTGACGGCAGCCG  44 472
JC861_RS08655 NONE
JC861_RS08650 1864452 .. 1864500 - -13.4  -4.20817   GAGATGGCAAAATAA GTATTATCAG-ACTGCCGGTGCTG ATA CATCACCGGCAGTACTGTTA-TAC GGTTAACGGTTTCCG 100 28
JC861_RS08640 1862810 .. 1862826 -  -2.3  -3.80625   GCCGGATAAGGTAAA              TTATGAT CGG AACATAA              TCAGGGGAGTGACTG  51 261
JC861_RS20730 NONE
        osmB 1861955 .. 1861975 - -14.7  -3.74747   GTAATCGCGATGAAA            GAGCCGGCA GAA CGCCGGCTC            CGGAAATTATTTTTT 100 32
JC861_RS08535 1847682 .. 1847703 - -10.9  -4.34402   TTTTGTATATCAAAA           GGCACTCAGG ACA CCTG-GTGCC           TTTTTGTATTTCCGG 100 344
JC861_RS08520 1845781 .. 1845796 -  -4.8  -3.16117   ACAGGCAATTTAACA              TAAGTA CCAT TACTTA               CCAAAACTAATCGGC  51 64
JC861_RS08515 1844643 .. 1844653 -  -5.4  -2.92668   CAGTAGGTAATGACA                 CAAG GTA CTTG                 CTGTTATCATTTGAA  52 32
JC861_RS08510 1843509 .. 1843531 -    -5  -4.64144   AACAATTGCTAAAAA           CAAAAACA GATATCT TGTTTTTG           TAGGTGAGGAAGTCG  72 327
JC861_RS08495 1841938 .. 1841976 -  -9.6  -3.19293   AAGCTGAACAGGTAA   TTGCCATGCTGGAACGTA AAA TACGCCTCAACATGGCTA   CTGACGAAGACAAGG  67 129
JC861_RS08235 1807242 .. 1807257 -    -4  -3.51825   GGATTCTAAGTACAA              CAACAA TCCT TTGCTG               CCATTACAAGATATG  52 198
JC861_RS08230 NONE
JC861_RS08225 1805990 .. 1806005 - -10.4  -5.29782   GATAGGCACAAAAAA              GCCCTC GCGG GAGGGC               TGGGGGTTATTTTTC 100 32
JC861_RS08210 NONE
JC861_RS08205 NONE
JC861_RS08200 NONE
JC861_RS08195 1802139 .. 1802154 -  -4.7  -3.86194   AAGTCCGGTGATAAA              TACCC GTCCGT GGGTA               GTGATTACCGGCTCA  59 287
JC861_RS08190 NONE
JC861_RS08185 NONE
JC861_RS08180 NONE
JC861_RS08175 NONE
JC861_RS08170 1798956 .. 1798967 -  -4.4  -3.81259   ACATAAGTGACTAAA                CACA TCCG TGTG                 CGTCACTATTGTGGT  57 47
JC861_RS08165 1798266 .. 1798281 - -10.4  -5.28176   TTTAGGTATAAAAAA              CCCTGC TAAT GCAGGG               TTTGGTTCATTCAAT 100 32
JC861_RS08160 NONE
JC861_RS08155 NONE
JC861_RS08150 NONE
JC861_RS08145 1796634 .. 1796651 -  -2.7  -3.83026   CTTCCTTACATCAAA             GACCTCA TCAT TAAGATC              CATCCCTCATCTCCT  52 239
JC861_RS08140 1794969 .. 1794989 -  -8.5  -4.08706   TGTTGAGCAGACAAA            CAAAAAAAT CGG ATTTTTTTG            CTCACAGGGGTAGAC  79 303
        rcsD NONE
        rcsB 1791409 .. 1791453 - -14.6  -2.94745   GAAAATAATAAACAG CCGGATAAAAAAACGCCATTC ATCT GAATGGCGTTTTTGCATC-GG TACGGTAATACGCTT 100 46
        ubiG 1784549 .. 1784572 -  -9.6  -3.44801   CCCGATAAAAAACGA          TCCCCGGAAC AAAT ATTCCGGGAA           AGTCAATAGCGGGCG  76 297
        nrdA NONE
        nrdB 1780992 .. 1781013 - -14.5  -3.21288   TAATGCAGATGAATA           CCCTGCATG TTGC CATGCAGGG            TGACTTTATAGCGGG 100 44
        yfaE 1780737 .. 1780753 -    -8  -5.40474   ACGGGCGTAAAAAAA              CCGGAT TGCTG ATCCGG              TCACATTATCATTCA 100 38
        tyrP 1779368 .. 1779396 -   -19  -4.61868   CACTGAGATAGAAAA        GAATCAGCCCGG GGTGA CCGGGCTGATTC        TCAGAAAGGTGATAT 100 40
JC861_RS08075 NONE
JC861_RS08070 NONE
JC861_RS08065 NONE
JC861_RS08055 1774012 .. 1774037 - -10.4  -2.67143   AGAGGCAGCAGATGA         TCAGCCTGCG GGACAG CGCAGGCAGA          GTCTTATACGGGAAA  74 156
JC861_RS08050 1773106 .. 1773122 -  -7.2  -4.04355   AAAAAACAGATCAAA              CCCGCC GCAGG AGCGGG              TTTCTCATCAGATAA  72 49
JC861_RS08045 NONE
JC861_RS08040 1771572 .. 1771596 - -14.4  -4.84529   GCATAAACGGAAAAA          GGACAGAGAC GGTCT GTCTCTGTCC          TTATGAACTACAGCA 100 33
JC861_RS08030 1768202 .. 1768233 - -13.8  -4.33487   AGAAAACAAAGTAAA      TGCCGGATGAGGGGA ATA TCCGC-CATCCGGCA      GAAACATCAGTGATC 100 32
JC861_RS08015 1765760 .. 1765785 -    -4  -2.54193   CAGTACCTGAAGTGA         CAGGCCGGCAT GCAGT AT-CCGGTCTG         TCCGGTGGTTTATGA  45 60
JC861_RS08010 1764569 .. 1764614 -  -6.3  -3.61239   CAGATTCATACAGAA TAACAGGGAATGTTCAGGTAAT ATA ATAACCTGATG-CTCCCTGTTA TACAGACCTAACCGG  63 33
JC861_RS08005 1763812 .. 1763825 -  -2.5  -4.06687   ATCCGGCAGAAATAA               TATTA AGGG TAATA                GGCATTAACCAGCAT  54 14
JC861_RS08000 1763348 .. 1763358 -  -2.4  -5.28176   GCCATTCAGAAAAAA                 CGGC CGG GCTG                 GATAAATTACTGGCG  75 99
        cycA 1760979 .. 1760993 -    -7  -6.07627   AGTCTGAAAAAAAAA               TCCGGC GTT GCCGGG               ATTTTTTTGTTTATT 100 39
        putA 1754915 .. 1754930 -    -9   -4.7878   TACTGATAAAACAAA              GGGAAC TTTC GTTCCC               TTTTTCCGTTTTAAG 100 67
        fliD NONE
        fliS NONE
        fliT 1748117 .. 1748153 - -22.5   -4.8048   GCCGGATAGTAAAAA    GTTCCTGCCGGACAG GGAACAA CTGTCCGGCAGGAAC    TGATCAGGCTTTTTT 100 77
JC861_RS07925 1746154 .. 1746178 -  -7.9  -3.91983   GCAGATAAATAAAGA         GAGCGGG-TC ACTTCA GATCCCGCTC          TTTTTGATCGGCTTA  74 38
JC861_RS07915 1744725 .. 1744748 -   -14  -3.89614   GTCAACCGGCAGAAA          CAATAAGCCC GGCG GGGCTTATTG           TTTTATCAGTCCGGT 100 20
        fliF NONE
        fliG NONE
        fliH NONE
        fliI NONE
        fliJ NONE
JC861_RS07870 1735570 .. 1735603 -  -3.8  -4.97312   AAAACGAAGCAAAAA    GGCGGTAACTCGGGGC TTTA GTCCCT-GT-ACCGCC     GTTATGCACAGAAAT  73 40
        fliL NONE
        fliM NONE
        fliN NONE
        fliO NONE
        fliP NONE
        fliQ NONE
        fliR 1730851 .. 1730864 -  -3.1  -5.08601   GTATGCGAAGAAAAA               CATCC GCGT GAATG                CAGTGGCCCCCGGTT  77 385
JC861_RS07825 1728853 .. 1728865 -  -3.3   -4.2461   ACCGCGATCAACAAA                GGTCT TGA AGCCC                TGAAGATCCCTCAGC  60 415
        flgA 1718117 .. 1718132 -  -4.6  -2.79183   CCGATCTGTATGAGA              TGGAGG GGTG CCTCCC               TTATGCTCATTATTT  49 93
        flgM NONE
        flgN 1716998 .. 1717023 - -14.7  -3.73386   ATATAACCACTCAAA         GGGGAACCCGC GCAA GCCGGTTCCCC          TTTTTGTTATATACG 100 304
JC861_RS07740 1713036 .. 1713055 - -11.4  -5.71712   TCTGACATAAAAAAA            CCGCAGCA GGGA TGCCGCGG             TTCAGATCTGTCAGT 100 56
JC861_RS20705 1700442 .. 1700455 -  -3.8  -2.91735   TCAACACGCGACACA               TCGC TTTAAT GCGA                AACTCTGCCTGATGT  46 60
JC861_RS07675 1699617 .. 1699629 -  -3.3  -3.04398   CTTCCCCTCCAAAAG                TGGAC ACA GTCCT                AAGCGAGGTTCTGGT  44 24
JC861_RS07655 1695333 .. 1695354 -  -2.9  -4.05402   GGTGAATGAAAAACA           GGCATAAAC AGAG GGTTAAGCC            GCACCTTTCATCCAG  54 19
JC861_RS07650 1695115 .. 1695133 -   -16  -4.84529   GCAGAAATGCAAAAA             GCCCGCTC AGT GAGCGGGC             TTTTAAATCTGGCTC 100 35
JC861_RS07645 1694881 .. 1694899 - -14.6  -5.42514   GCAGAAATGAAAAAA             GCCTGCTC ACT GAGCAGGC             TTTTAAATTTGGCTC 100 35
JC861_RS07640 1694560 .. 1694578 -   -16  -5.04601   GTCAGAAAGCAAAAA             GCCCGCTC AGT GAGCGGGC             TCTTAAATCTGGCTC 100 35
JC861_RS07635 1693957 .. 1693971 -  -4.2  -4.25104   GCTGGCTGAGGAAAA               GCCG GAAGTCG CGGC               AGCAGCACGGGTTCA  62 324
        pyrC 1692166 .. 1692200 - -12.3   -5.0916   CTCTGAACATAAAAA     CTGAGCAATAAGACG TTTTT CATCTTATTGCTCTG     AAGGGCTACGTATTT 100 59
        bssS 1691703 .. 1691720 - -11.3  -4.51238   CGCAGAAAACACAAA             GGACACC AAAT GGTGTCC              CTCTTGTGCAGTCTT 100 47
        ttrS NONE
        ttrR 1684077 .. 1684090 -  -6.7  -3.40403   TCGTTGTTATCAGAA               GCATC AGCA GATGC                GGGTTCATGTAAATG  61 79
JC861_RS07585 1683077 .. 1683104 - -18.6  -4.65933   GAGCGGTAAAACAAA        CACGGCTGTTTC AGAT GAAACAGCCGTG         AGCGGATTAATGGAC 100 32
        mdtG 1681792 .. 1681819 - -10.7  -4.28361   GTAAGCGGATGAAAA        CCGG-CGATATC TACCC GATATCGGCCGG        TTTAATTTCCGGTGT 100 8
JC861_RS07575 1679839 .. 1679858 - -13.6  -5.60993   CTGCGTATAAAAAAA            GGGTGAGC CGGA GCTCACCC             TTTCTGTCTTTATAT 100 51
JC861_RS07555 1676274 .. 1676288 -  -2.8  -5.03314   TGGATTGTGAAAAAA               TACATC GAT GAGGTA               TTTACACAATCTGAT  77 360
JC861_RS07445 NONE
JC861_RS07440 1653363 .. 1653404 -  -9.6  -3.01906   GGAATAAACATGACA CTCCGCACCGGCATATTAT GCTGA ATAAAA-GCCGGTACGGAA TAAGAATTAACTAGT  71 36
JC861_RS07435 NONE
JC861_RS07430 1651593 .. 1651607 -  -7.8  -2.75074   CGCAGGTGAATATCA               CCGGTC TGC AACCGG               CTGAAAACAGCCAGA  57 311
JC861_RS07385 1643941 .. 1643962 - -10.9  -2.93633   TTATAAGATATCACA           CCCGT-TCCG TCA CGGACACGGG           CAGACAACCGGCAGA  79 480
        hemF 1642973 .. 1642991 -  -2.3  -2.66733   TGTGAATTGATATCA             GACCCAG TCCCG CGGGATC             AGGAAATCGTCCAGC  40 4
JC861_RS07370 1641724 .. 1641751 - -11.4  -4.15788   AAGGGCGTTAACAAA        GAAAACCCGCAT TTTA ATGCGGGTTTTT         TTATGTCCGGACATT 100 42
JC861_RS07325 1632121 .. 1632136 - -11.8   -4.1196   AATTCAGTCTCAAAA              GCCCGG TAAT CCGGGC               TTTTGCTTTTTACCG 100 35
        suhB 1614483 .. 1614503 - -14.1  -5.65927   CACTGAAATAAAAAA            CGGTGGTTA TGT TAACCACCG            TTTTTTAAAAGAGGG 100 51
JC861_RS07230 1608374 .. 1608402 - -18.9  -3.65201   TAACAGCGGTAATAA        TACGGCACCGGCG CTG CCCCGGTGCCGTA        TTCTCAGAGTGATTC 100 29
        hmpA 1604009 .. 1604027 -  -7.3  -2.80016   GGTCAGCATGAATTA             CCGGCGC TGTTT GCGCAGG             TTTCCGGGATGAATT  53 316
        mltF 1583770 .. 1583799 - -11.5  -3.06183   GTGATGCTCAGTGAA       TTTTTCCGCCGCC GCCG GGCGGAGAAAAAA        GCCCTGAAAAAACAG  75 74
JC861_RS07135 1580263 .. 1580280 - -10.5   -4.6644   AACAGAGTGTAAAAA             GCCCGGC TGCG ACCGGGC              TCTTTTTTTATCAGA 100 46
JC861_RS07110 1575055 .. 1575071 -  -2.3  -3.13475   GAACGTCATATTGAA              TTCCTAT CGA ATAGTAA              TAAAAAAATAAAAGA  43 170
JC861_RS07105 1574465 .. 1574488 - -15.3  -3.38178   TAATTAATGGGATAA          GGCAGCGCG GTGAAG CGCGCTGCC           GTGGCTGACTGCTAT 100 40
JC861_RS07100 NONE
JC861_RS07095 1573188 .. 1573198 -    -4  -4.44608   TTTACTGAAAAATAA                 GATT AAA AATC                 AGGGCTGCCGAAAAT  66 1
JC861_RS07090 NONE
JC861_RS07085 NONE
JC861_RS07080 NONE
JC861_RS07075 NONE
JC861_RS07070 NONE
JC861_RS07065 NONE
JC861_RS07060 1565313 .. 1565328 -  -6.1  -4.63486   ATGCCGGTAAGAAAA              CCGGT ATTATG ACCGG               TCAGGGTAATTCACG  77 26
JC861_RS07050 1564013 .. 1564023 -  -3.2  -3.01329   CCATACACCAAAGCA                 GGTA AAT CACC                 ACATCACTCCCCGAT  44 29
        tssB NONE
        tssC NONE
        tssE NONE
        tssF NONE
        tssG NONE
        tagH NONE
        tssJ NONE
        tssK 1546015 .. 1546027 -  -6.2  -3.51924   CGCTGATGCAGATAA                CCGG TATCG CCGG                GCAGATCATCAGACA  61 65
        icmH 1544895 .. 1544918 - -10.2  -2.87132   CTGCTGCGGCAGATA          GCGCTGCGGC ATTT GCAGCAGCAC           CAGCAGCACAATACC  75 383
JC861_RS06960 NONE
        tagO NONE
        tssA NONE
        tssM NONE
JC861_RS06940 NONE
JC861_RS06935 NONE
JC861_RS20690 1532985 .. 1533006 -    -3  -2.62396   TATCGGCGGATAGCA           CGGCGTGCA TTGTG TG-ACACCG           GTGGCTTCCAGCAGA  42 206
JC861_RS20685 1532509 .. 1532547 -  -9.1  -4.63592   TTTTAATAAAAATAA  GGAA-GAACGGAAATCAC GATA ATGATTTCCGTTCATTGC   GTTTAAATCAGCGAT 100 28
JC861_RS06925 1531953 .. 1531976 -   -14   -5.0133   GAGCTGTGTAAAAAA          TAACAGAGGG AATG CCCTCTGTTA           TTTATGTCAGAATAC 100 32
JC861_RS06905 1529448 .. 1529483 -  -8.8  -2.88452   TCTTGAAACAAATAC    CTGACAGTTGCGCCCG GTTG CGGGCGTTTCTGTCTG     TTCAGATCTTATCTG  67 27
JC861_RS06865 NONE
JC861_RS20680 1514933 .. 1514971 -  -4.5  -2.94218   ATGTTGCATTATAGA  CTCCTGA-ACGGGCAGCC CGCA GGCTGCCCGGATTAGAAT   GAAAATTAACGGATG  50 31
JC861_RS06860 1510639 .. 1510663 -   -13  -5.52986   ATGCGATTAAAAAAA          TAACAGCCTG AATAA CAGGCTGTTA          TCTGTCTCTCAGCGA 100 47
        srmB 1505260 .. 1505276 - -12.3  -5.71983   GTAAGCATAAAAAAA              CGGACTG TGA CAGTCCG              TTTTCGTTTATCAGA 100 56
         ung 1502794 .. 1502812 - -11.7  -2.93723   TTGTCAGTAATCACA             TGCCGCC GCAAG GGCGGCA             TTTTTGTACCTGTAT  83 52
        nadK 1501123 .. 1501149 -  -3.7  -3.08197   GTGGATATACACATA         CCTGTTTTTAC ATACA GTATAATCAGG         ATTTGCATCCGGTAA  48 60
        recN 1499423 .. 1499441 -  -4.5  -2.91689   AAAGTTAGATGAAAT             CAGCTTG TTTGT CATGCTG             CCAGCAATTCTTTTG  50 18
        bamE 1498850 .. 1498878 -  -6.5  -5.18866   CTGAAATAAACAAAA        CCCGCAGATCCAC GAT GTGTCCCGGCGGG        TTTTTTTGTTACTTA  87 72
JC861_RS06790 1497181 .. 1497196 - -10.4  -5.77988   AGAGATATAAAAAAA              CGGGGA AGAT TCCCCG               TATTTTTATTGCTGC 100 63
JC861_RS06785 1495602 .. 1495612 -    -4  -4.56775   ATCCTGTTTGAAAAA                 TGAT ATA ATCA                 CAAAATCCCCGGAAC  66 23
JC861_RS20670 1494649 .. 1494659 -    -4  -3.72576   TTTTCGCCCATTAAA                 TACA TAA TGTA                 CTTCACAACAGACTC  54 349
JC861_RS06775 NONE
JC861_RS06770 1492970 .. 1493001 - -10.8  -2.53263   CGGACTGTGAAGTGA      CCCCTGATAGCCGG ATAA CCGGTTATCGGGAG       TTTTAGTGTCAAAAT  76 169
JC861_RS06750 1487910 .. 1487929 - -10.7   -3.5936   GTTAAAGGCTGCAAA            GCGGAGC AATTCA GCTCCGC             TTCCAATAAAAAACG  84 48
JC861_RS06730 NONE
JC861_RS06725 1484895 .. 1484909 -  -3.5  -3.55814   TATTAAGTGAGACAA               CCCGT TTTGC ACAGG               CGGATAAATCAGTTA  51 298
JC861_RS06695 NONE
JC861_RS06690 1477457 .. 1477470 -  -2.3  -4.34223   AATTTAATGAATAAA               GGTTC TTTT GACCC                GCTCAGATACCAGGA  58 0
JC861_RS06685 NONE
JC861_RS06680 1476124 .. 1476149 -  -9.8  -4.88129   AAAAACGACGAAAAA         TGCTGTCACC GGAAGT GATGACAGCA          GGATATAAAATAAGC 100 51
JC861_RS06675 NONE
JC861_RS06670 1473638 .. 1473671 - -14.9  -3.21276   TTTCGTCTGATAACA     CAAAGCAGGA-AAAAC CAC GTTTTATCCTGCTTTG     TCAGCAATCTCACGC 100 65
JC861_RS06650 1470578 .. 1470604 -  -9.7  -3.27364   GAGAAAATAAATAAT         CATCAATAATA TTAAT TATTATTGATG         TGTAAACTATTTCTC  76 494
JC861_RS06615 1463434 .. 1463447 -  -2.4  -2.86449   ACGGCAGGATAATCA               GACA TAGCAG TGTC                TCCGTAAGATAAGGG  41 52
JC861_RS06610 1462614 .. 1462637 -  -6.8  -3.63266   AAAATGCATTGGAAA          CCAGTTCA TTATCATC TGAACTGG           TTGAGCTGGTTTATC  63 380
JC861_RS06595 1461031 .. 1461043 -  -9.1  -3.19003   ACAATACTGCACCAA                CGGCA CGA TGCCG                ATGGCGGACTGGCTC  67 320
JC861_RS06585 1459785 .. 1459795 -  -6.8  -2.78384   GGTGTTCTTATTACA                 GCGA CCT TCGC                 GCCGCCCGGAAGCGG  53 85
JC861_RS06575 1457888 .. 1457898 -  -2.4  -3.14132   CGCCCGGTGTAGCAA                 CTGC GGC GCGG                 TATTATCCGGTGAGG  43 48
JC861_RS06540 1450572 .. 1450591 -  -4.2  -3.80858   GCACAATGGACGAAA            TCTCCGAG AGCT CACGGAAA             ATCGCGGAGATCACC  56 518
JC861_RS20665 1448810 .. 1448825 -  -3.2  -3.32844   GTTTTCAGCCTATAA              CGGG AAGCAAAA CCCG               CTGCTGTCCCAGCCC  47 4
JC861_RS20660 1447900 .. 1447915 -    -9  -4.05067   TACGTTATAAAAACA              GGCTCT GATG AGAGCC               ATCATTTTCATTCTG  80 368
JC861_RS06520 1446665 .. 1446675 -  -2.6  -5.59502   GAAAAAACGAAAAAA                 TAAT AAA ATTA                 ATATATGTAATCCCG  84 23
        fimA 1445715 .. 1445728 -  -2.3  -4.07618   TGCTGAATAAGCAAA               CCCTG ACAT CAGTG                TGAAAAACAATATCA  55 275
JC861_RS06510 NONE
        fimD NONE
JC861_RS06500 NONE
        sfmF 1440736 .. 1440748 -  -2.7  -3.95435   CGGCGGAAAACAGAA                TTACG GCA CATAA                CGGTCTTAATACCGC  55 167
JC861_RS06445 NONE
JC861_RS06440 1431654 .. 1431694 - -10.7  -3.02144   CCACGCCGGGTAATA CGCTCTTCGTGAGGGGAAA CTGTT TTTCCCCTCAC--AGAACG GATAAACGCTTACCA  79 35
JC861_RS06420 NONE
JC861_RS06415 1426827 .. 1426837 -  -3.2  -3.24924   CTGTCACTGATAATA                 TGCA TAA CGCA                 CACAGCGATATTAAC  47 98
JC861_RS06410 NONE
JC861_RS06405 1424791 .. 1424810 -  -7.8    -2.914   CTTATCAGATTAAAG            TCCCGGAA TCCG TTCCGGGG             GTTAAAAATAATAGT  62 27
JC861_RS06400 1423567 .. 1423590 - -11.8  -4.38712   GCTATTTGTATAAAA          CAGGGTGAAT GAAT ATTCACCCCG           GAATTAACTTTATGA 100 35
JC861_RS06395 1422775 .. 1422788 -  -3.9   -3.3944   TGCGGAAGATAAAAG               TGATA ACAA TATCA                GGACAGAAAGGTGGT  49 105
JC861_RS20650 1420285 .. 1420301 -  -8.7  -3.46647   TGTACGGAGTAAACA              GCCGATA CGT TACCGGC              ATGTTTCATCAAAAA  73 18
JC861_RS06380 1419067 .. 1419090 -  -4.4  -4.07885   CAGCGGTCTTGAAAA          CCGCCGACGG GAAA CCGTCCGAGA           GTTCGAATCTCTCCT  61 237
JC861_RS06370 1418443 .. 1418475 -  -9.2  -2.65112   AAGTCACGGATATTA     TCGCAACC-CCCTGT GATT ACAGGGAAGTTGCGG      TATTTCGTGTCCGCC  68 56
        hspQ 1417664 .. 1417687 -  -9.5  -4.98128   ATAAGCAAAAATAAA          GCCCCGGCA TGTGAG TGGCGGGGC           TCTTCGTGTATTAAT 100 36
JC861_RS06350 1416614 .. 1416639 - -14.7  -3.06261   CCTGAACGGGGAAGA         TGCGGCGGGGA AGGT TCACCGCCGCA          GCACGTGGTTACTGA 100 34
        yccS 1412131 .. 1412146 -  -3.2  -3.34895   GGCAGGCTGAATTAA              CCGG TGGTCATC CCGG               GGAACGTTATGATTT  47 32
        sulA 1410542 .. 1410555 -  -4.5  -2.67667   CTATTTAGCAAATAG               CTCCC AACA GGGAA                TTTTAAGCACTACCT  48 258
        ompA 1409304 .. 1409329 - -14.9  -5.31456   GGAACGGACAAAAAA         TAAACCCCATC CGGA GATGGGGTTTA          TATAATTCATTGCAT 100 78
JC861_RS06315 1406796 .. 1406811 -  -3.2  -3.32966   ATAGGCTACACAATA              GCTTAC ACTT GTACGC               TGAACAAGTCCGATC  47 55
        fabA 1406182 .. 1406211 - -16.7  -2.71011   ACCCGGTTTGAAGGA       TAAAAAACCTCCG CATG CGGAGGTTTTTTA        CGGATAACACCACGG 100 50
JC861_RS06275 1396727 .. 1396755 -  -4.4  -5.44721   ATTACGCCAAAAAAA        TACCCCCTGTGG TTTAT CTGCCGGGGGTA        TTTTTTATCGGTTAT  85 71
        pncB 1388058 .. 1388100 -   -13  -2.57211   ATTGGGGGTCAGAAG CCCGAAAAACAGAAAAAA TAACCGT CTTTTTCTGTTCTCCGGG GGTATCTGTATAAAA  91 48
        asnS 1386451 .. 1386468 -  -8.3  -5.65177   ACAGGCATAAAAAAA             GCCGGCC TGAT GGCCGGT              TTTTTACATTCAATA 100 54
JC861_RS06235 1385069 .. 1385086 - -12.7  -5.62045   ACAGATAACAAAAAA             CCCACGG CAAG CCGTGGG              TTTTGGTATTCATAT 100 57
JC861_RS06230 1383633 .. 1383663 - -19.8   -4.6955   CAGGAACAGATAAAA       CAAAGCCCCCGGCC GGA AGCCGGGGGCTTTA       TCAGAAGCAGAATGT 100 52
JC861_RS06225 1382704 .. 1382724 -  -9.7  -3.00908   TAGTAAAGATGAAAG            GTGCCTGAC GTT GTCAGGCAT            TTTTTATGAGCCGGG  73 29
JC861_RS06200 1377237 .. 1377264 - -14.2  -3.53012   GGGTTTTCTCTGAAA        CGGATGAGCGTA TGAC TGCGCTCATCCG         TTTTTTATATCAGCG 100 35
        elyC 1368850 .. 1368872 -  -9.9  -5.38958   AGTTATAAACAAAAA          CGCGGG-TCA CTTC TGAACCCGCG           TTTTTGTTGTCTTCT 100 39
        ycaO 1354043 .. 1354093 -  -7.3  -5.41359   AATTAAAGTAAAAAA TCAGGTTAACTTG-TCGTTTT-TGT GTT ACTTAAAACGAACAAATTAACCTAA TATTTACGTTTATTG  91 54
        focA NONE
        pflB 1350550 .. 1350569 -  -7.8  -4.33819   ACCAGTTATAATAAA            GGCCCC GAAACAGA GGGGCC             TTTTAGTTTAAGTTA  79 74
        pflA 1349731 .. 1349750 - -12.2  -5.27335   CGGCGCAAATAAAAA            CAGCACAC CGGA GTGTGCTG             TCAGCAATAACAGTG 100 48
JC861_RS06090 1347807 .. 1347826 -  -5.6  -5.03145   GAACTCCGGAAAAAA            GAGGGAGC AGGT GCCCCCTT             CAAAAATAATTACTG  82 35
JC861_RS06085 NONE
JC861_RS06080 NONE
JC861_RS06075 NONE
JC861_RS06070 NONE
JC861_RS06065 1342335 .. 1342345 -  -8.2  -4.30995   GGTGTCAGAAAACAA                 CCGG AAG CCGG                 TATAAAAAGAGATAA  82 79
JC861_RS06060 1340915 .. 1340938 - -14.6  -5.26316   TGATCTGATAAAAAA          TCCCGCCGGT GTAA ACCAGCGGGA           TTTTTTTTATCTGTA 100 50
        trxB 1331572 .. 1331591 -   -10  -4.35116   CATGGTACACGAAAA            GGCGCTAC AGAT ATAGCGCC             CTGATAATGCAGGAT  93 40
        cydD NONE
        cydC NONE
         aat 1327159 .. 1327180 -  -3.7  -3.12668   TTTCAAACCGCAAGA           TAATGCCGA AAAA CCGGGATTA            TGTAAAGGAATGATA  48 111
        infA 1326827 .. 1326871 -  -7.8  -5.07275   GTACAGACATAAAAA CGATCACCACAGGACGCGCAC TTCG GTGCGTTGCCTGTGGTG-TCT TTTTATGAGGCGTGG  95 51
        cspD 1323523 .. 1323570 - -11.5  -4.09243   CACACCGGCTGAAAA TACGAATACGTCGCGG-AATGAC GATT GACATTACCGCGACG-ATCCGCA TAATTTTGTAAAATA 100 114
JC861_RS05975 NONE
JC861_RS05970 1316087 .. 1316106 -  -2.9  -4.44667   CGCCGTAAGAATAAA            TATGCAA TTATTT CTGCATA             AAAAACTACTAAAAA  61 68
        artP NONE
        artJ NONE
        artQ NONE
        artM 1313095 .. 1313121 - -14.5   -5.7946   GCCGGAATAAAAAAA        CGGGGCTG-CGT ACAG ACGTCAGCCCCG         TTTTTGTATGAGCGG 100 42
JC861_RS05930 1310542 .. 1310565 - -14.6  -4.47977   AAGAAGAGAAAACAA          GCCGTTCCCC TGGC GGGAAACGGC           AGTATAGCTTAGCTG 100 34
        ybjG 1309526 .. 1309555 -  -6.4  -3.16668   TAATACTGTCAGCAA       TCTCATACCGGC ACACCG GCCGGTATTAGC        GGATTTATGTTTGTA  57 44
JC861_RS05920 1307273 .. 1307292 -  -9.3  -5.61596   ACGCGGATAAAAAAA            TACCGGC GTGCGG GCCGGTA             TTCTCTGACTCATAC 100 146
JC861_RS05915 1305009 .. 1305030 -  -4.3  -3.27786   GTGAAAATTCACGAA           GCCGTTACT TTTC AGTTCCGGC            TGATTATTGTTGTTG  51 78
JC861_RS05910 1303535 .. 1303558 - -16.8   -4.8048   TCCTGATATGAAAAA          CCCCCGCAAT CTGC ATTGCGGGGG           TTTTTGCAGTCATCA 100 53
JC861_RS05890 1299717 .. 1299735 -  -5.9  -2.61383   ACGCTGACGGAGAAT             TCGCCGG TCGAT CCGGTGA             CTGAATCAGCCAAAG  50 460
        hisL 1298984 .. 1299011 -   -12  -5.64274   TTAGGTATAAAAAAA        CCCCCGGGAAAA AAAA TTCTTCCGGGGG         TTCTCTATTACACGC 100 64
        hisG NONE
        hisD NONE
        hisC NONE
        hisB NONE
        hisH NONE
        hisA NONE
        hisF NONE
       hisIE 1291810 .. 1291838 -  -3.9  -5.08601   TTACGGCAACAAAAA       CAG-CGGGCAAA AAAGGA TTTGCCCGGCTT        TCGGATTAACGGTGA  77 31
JC861_RS05835 NONE
JC861_RS05830 1290522 .. 1290537 -    -9  -5.24531   ATGTTTTATAAAAAA              GGAACC TTAT GGTTCC               TCAGACCCGCCGCGC 100 53
JC861_RS05825 NONE
JC861_RS05820 1289077 .. 1289101 -   -13  -3.83154   CAACGATAAGCTAAA          GGATATGTGC TATTT GCACATATCC          TTTGAAATAACGTAT 100 10
JC861_RS05805 1285303 .. 1285342 - -10.2  -5.09762   GTGGAATAAAGAAAA  GGAAACAGGGTGATTA GAACAAAT TCATCACCCTATTTCC   ATTATATTTTATAAT 100 47
JC861_RS05800 NONE
JC861_RS05795 NONE
JC861_RS05790 NONE
JC861_RS05785 1280258 .. 1280289 - -19.6  -3.61764   CGATTAACTGTTAAA      TAATAACGCCGCCG GAAA CGGCGGCGTTATCA       TCATATCGTGCGGGT 100 40
        gndA 1276973 .. 1276999 - -13.7  -4.70659   TCTGATAGTTAAAAA         CCGCGCAGACC GGTCT GGTCTGTGCGG         TTTTTCAAATCATAA 100 54
JC861_RS05770 1276065 .. 1276086 -  -5.8  -2.72049   CACAGTTCTGAATTA           TTCCTCCG TCAATC CGGCGGAA            GATTCATTATTCATT  52 1
JC861_RS05765 1275697 .. 1275713 -  -9.4   -5.9003   AAAGCAATAAAAAAA              CCCCGT ATCTG ACGGGG              TTTCGCTTTATAAAG 100 50
        metG 1266810 .. 1266827 -  -9.1  -5.79595   TTTTAAAATAAAAAA             CCTGCAC CAAA GCGCAGG              TTTTTTTCAGTTTAT 100 56
JC861_RS05710 NONE
JC861_RS05705 1263623 .. 1263652 - -15.3  -2.91264   GCGGGTAGTTATACA       TAATGAACGTGAT TCTT ATCACGTTCATTA        TGAAACTAATGAAAC 100 79
         cdd 1262646 .. 1262676 -  -7.7  -3.72241   GAGTAATCACGTAAA       GGTTGATACCC GGAACCGGT GAGTATCAACC       TCAGAAAGGAAGGAT  70 40
JC861_RS05695 1260747 .. 1260772 -  -7.6  -4.79949   GGGTGAAAAAAAGAA         TAAAACCCGC ACAGAG GCGGGTTTTC          AGTGACAGTTCACTG  91 49
        sanA 1259838 .. 1259857 -  -9.2  -3.55444   TGGTTATGGCGGAAA            GCAGCCGG TAAA CTGGCTGC             CCGCTGAGATGATGC  76 40
        moeA NONE
        moeB 1253826 .. 1253838 -  -4.8  -2.92475   TCCATCTGGATAAAC                CGGA GACTA TCCG                TTACAGCCGCACACT  47 19
JC861_RS05640 NONE
JC861_RS05635 1247157 .. 1247173 - -10.9  -5.72616   ACTGAGATAAAAAAA              CCTCATC ATG GATGAGG              TTTCTGTTTTTCAGA 100 54
        rhtA 1244916 .. 1244930 -  -8.5  -3.72588   GAATCGATAGGCAAA               CCGGC ACAAG GCCGG               TTTCAGTATGGCAGG  73 44
         dps 1244152 .. 1244169 - -11.3  -5.85011   TAAAAAGTAAAAAAA             TACCGCC CGGA GGCGGTA              TAAAGGGTAGGATTG 100 144
JC861_RS05610 NONE
JC861_RS05605 1242862 .. 1242876 -  -4.2  -3.53091   ACCGGCTGGTGGAAA               CCCACT GTC AGCGGA               TACGGGACGGGCAGA  51 410
JC861_RS05595 NONE
        sseA 1239897 .. 1239923 - -13.1  -5.80248   TAACAGATAAAAAAA        TGCCGGAGTCAC TGAT GTG-CTCCGGCA         TTTTTTTATGGTTCG 100 31
        cecR NONE
        hlyD NONE
JC861_RS05560 NONE
JC861_RS05555 1232255 .. 1232274 -  -5.2  -4.15998   ATGTAAATTAAAGAA            TTTAAAAT TCTA ATTTTAAA             AGGAGGATTCTTATT  65 132
JC861_RS05550 NONE
JC861_RS05545 1230168 .. 1230179 -    -3  -3.77831   GTATCAATATTCAAA                GAAA TAGC TTTC                 CTGTAAGATTATAAC  53 98
JC861_RS05540 1229103 .. 1229120 - -12.7  -4.07618   TGTGTAACAATGAAA             GGCCGGT GAAA ACCGGCC              TGAGATTGCTGACAA 100 196
        yvcK 1223663 .. 1223680 -  -4.8  -4.59424   AAAGGCAAAGGAAAA             GCTGCC GCGAAA AGCAGC              GATTACCAGCGTATG  72 187
        bioA 1216144 .. 1216171 -  -9.8  -4.55798   CAGGCGAAACGAAAA        GCATGCGCGTCA GGGA TGACGCGCCTGA         GCGTACAGGGAGGTA 100 109
JC861_RS05465 1213998 .. 1214015 -  -8.5  -6.01369   GAAATAATAAAAAAA             TGCCTTT ATTA AAAGGCA              TTTTTTATAGTTCAT 100 54
        modE 1208808 .. 1208834 -  -9.4  -4.28548   AGTTACTGACGAAAA        GCCGCCGCCAG TTCAGT CCG-CGGCGGC         TTGTATTATCAACAC  88 34
        modF 1203156 .. 1203169 -  -5.3  -4.45068   ATTCTTAATAACAAA               CTGAA TACA TTCAG                AAAATAACGGCTGTT  70 83
JC861_RS05410 1202206 .. 1202224 -  -3.2  -3.00215   AAAGTCTGATACACA             GAAAAAAA CAG TTTTTTAC             GCCACCTTAAACGGC  44 22
        gpmA 1201184 .. 1201212 - -13.3  -4.57353   CCGGATGACAGAAAA        TAAAAACCCTGAC GAT GTCAGGGTTTTTT        TTCACCGGAGAAAGC 100 44
JC861_RS05385 1196708 .. 1196724 -  -6.5  -2.85402   TAAATCAGTATTATA              TCGTGCC GTT GGCAAGA              GAGTACGGGTCGTTA  55 379
JC861_RS05320 1187921 .. 1187938 - -11.3  -3.84406   CGTTTATGACAACAA             GCCGTTC ATCT GAACGGC              TTTTTTCTTTTCTGT  95 53
JC861_RS05255 1172068 .. 1172091 - -12.6  -3.48822   GACAAGAATGCATAA          TAAAACCCTC CGGA GAGGGTTTTA           TAAGGACGGATGCGG 100 49
JC861_RS05245 1169984 .. 1170001 - -12.7  -4.57882   CGTAACAAGAAGAAA             GCCGGTC ATCT GACCGGC              TTTTACTATATGGTT 100 49
        ybfF 1165249 .. 1165267 - -13.8  -4.20516   CCGTCAGTGAATAAA             CGCCGCCG TGA CGGCGGCA             CCGGTATCAGGCTTT 100 32
        ybfE 1164341 .. 1164362 -  -3.1  -3.87815   TTTCATCTTTATAAA           TACTATTCT GACG AAAACAGTA            TTTGAAGTCTGTCAA  53 60
        fldA 1163733 .. 1163743 -  -5.4   -3.3506   CTTAAATTGCCAGAA                 TCTC GTC GAGA                 CTCATTTCTTCGCGG  55 1
         fur 1163048 .. 1163062 -   -10  -5.66338   AAACACAATAAAAAA               GGTGCA TTA TGCACC               TTTCATACAATTCGG 100 54
        nagB 1157819 .. 1157837 -  -8.8  -5.31072   ACAACACAACAAAAA             CCGCCC GGATAAA GGGCGG             TCAGCATCGGTTATT 100 36
        nagA NONE
JC861_RS05175 1155217 .. 1155241 -  -4.3  -2.79302   ATTATGCGGATTACA          GCCAAAAGC GTCAACT GCTTTTTGC          AGATATTTTGATGAA  46 136
JC861_RS05170 NONE
JC861_RS05165 NONE
JC861_RS05160 1154801 .. 1154833 -  -2.5  -3.18024   TGCCAGGATCAAAAC      CTGGTGCCTTACCGC TTG GCGATACCCCACCTG      AAAAACGAGGCTTAT  44 70
JC861_RS05155 NONE
JC861_RS05150 NONE
JC861_RS05145 1154512 .. 1154540 - -13.9   -3.2511   CCGGATTCAGAAAAG        CAAAAAGCCCGTC AGA GACGGGCTTTCAG        AATTTGGCTGGGGTA 100 30
        miaB 1151436 .. 1151465 -  -5.7  -3.05384   GTTTCTGTCACTGAA       TCTCTCTGTGTAT TCTC ACGCGCAGAGAGA        TCTGCGCGTGACGGG  54 47
JC861_RS05130 NONE
        ybeY 1149852 .. 1149883 -  -9.6  -3.93288   CCCGATTTAATGAAA      GATGCCG-TATTATG TAG CATAAAAACGGCATC      GCTGACTACGCTTTT  83 31
        corC 1148913 .. 1148937 -  -2.1  -2.72511   GCCACTGGCGTAAAC          CCTGAGGTGAT TTC ATCATGTCAGA          TTATCTTCATCCAAA  40 16
         lnt 1147324 .. 1147349 - -13.3  -4.98531   GTCTGAAATGAAAAA         TCCCGCGGTGA GCAA TCACGGCGGGA          TTTTTTTTATCTGCG 100 54
JC861_RS05090 1142137 .. 1142156 -  -7.2  -3.21395   ACTCCCTGTATAAGA            CGGATAACC AGT GGTTA-CCG            GACAGATAGAGTATT  62 164
JC861_RS05085 NONE
        gltK NONE
JC861_RS05075 1139931 .. 1139949 - -12.4  -4.58859   AAAGAGAAGAAGAAA             GGCCGGTC TGT AACCGGCC             GGTCAGAACATCAGT 100 36
        leuS NONE
        lptE NONE
        holA NONE
        nadD 1134898 .. 1134911 -  -3.7  -4.11216   TTGTGATTGCCAAAA               CCCGG CAGG CAGGG                TGAGTCAGCGGTAAA  60 30
JC861_RS05045 1133464 .. 1133483 - -10.7  -3.55801   ATGAACTGGCGGAAA            CCGCTGC GGTCTG GCAGCGG             GAACTGCTGACCGCA  78 274
        rsfS 1132620 .. 1132632 -  -3.3  -3.09492   GCTGTAACTTCAACA                CTCAG CTC CAGAG                TTTCTCTAATTCATA  46 14
        rlmH NONE
        mrdA NONE
        mrdB NONE
        rlpA 1128033 .. 1128061 - -14.7  -4.85782   CCGGTGAAAAAGAAA        CGCTATCATAGCA AAG TGCCATGACAGCG        CGTAGTGTTATCACT 100 49
        dacA 1126790 .. 1126802 -  -3.3  -2.73364   TCTTCAGCCGAACCA                GCGGT GAA ACAGC                AGGCGGATATAGTCG  42 1
        ybeD 1126396 .. 1126425 - -14.3  -3.14132   CTGCTTTGTCAGCAA       GTTCAGGCCGCCC TGAA AGGCGGCCTGAAA        TGATGAAGAAATAAC 100 45
        lipB 1125478 .. 1125500 -  -2.9  -4.59853   TCAATCTTTTAAAAA           TCTTTTTAA AAATG TTAAAAAAA           TTATATCACTATTCT  64 34
        lipA 1124364 .. 1124383 -  -9.2  -5.61596   AGCGGCATAAAAAAA            CCGCCGTT TTTC AGCGGCGG             TTTACGGTATTCACA 100 54
JC861_RS04990 1123340 .. 1123363 -  -5.3  -4.26076   TTACCGTGACGAAAA          CCTGTTACT CACCAT AGTAACGGG           TTTTTTTTATATCAG  68 37
        nrdH NONE
        nrdI NONE
        nrdE NONE
        nrdF 1116966 .. 1116999 -  -5.5   -5.1861   TTTATGAGCAAAAAA     TGCACTGATAT AAATATGCTGCA ATATCAGTGCA      TTAATAAAACCGGTG  81 75
        proV NONE
        proW 1114059 .. 1114103 -    -2  -3.28712   CTGCCGCCGCGATAA CAGCGGCAGGGTGATAATGAT CGGG AGCAAAA-CTCCCTGTCGCTG CCGCGGATTACGGTG  45 33
        proX 1112981 .. 1113002 - -14.5  -5.86061   GTTGAGGAAAAAAAA           GCGGCCATA TCGC TATGGCCGC            CGGACGGATTTTTCA 100 48
JC861_RS04935 1111602 .. 1111615 -  -8.1  -4.62069   TTTTGAGTTTAAAAA               GCACC GGAA GGTGC                TTTTTACGGAGGAAT  86 40
        mprA 1110447 .. 1110493 - -12.4  -3.70139   TAACCGCAACAAAGA CAGGCTTGCTATTGTCGTCA CTGTGGT TAACGACAACTGCAAGCCGG GATGGTCAGCACATC 100 162
        emrA NONE
        emrB 1107355 .. 1107370 -    -9  -5.70829   AATATTATAAAAAAA              CCATGC CGGA GCATGG               TGCAAAAATATGCAT 100 321
JC861_RS04915 1106764 .. 1106779 - -11.8  -3.66999   AGTGATTGATTCAAA              CCCGGC ATTT GCCGGG               TTTTTTAATCGATCA  93 30
JC861_RS04905 NONE
JC861_RS04900 1101865 .. 1101875 -  -3.2  -3.23447   TGAATTTTGACAACA                 TCAC AGT GCGA                 ATTATCTCTTTAGTT  46 199
        pssA 1100481 .. 1100498 - -12.7   -6.0427   ATGAGATAAAAAAAA             TCCCGGC CGGA GCCGGGA              GGTGTGTATCAGAGG 100 34
JC861_RS04890 1099894 .. 1099910 -  -8.1  -2.70932   TTGTTGTTTTAATGA              TGAAAGT ATT ACTTTCA              TATCGGTGTTTTTTA  60 224
JC861_RS04885 1096021 .. 1096036 - -10.4   -5.2422   AACCAGATGAAAAAA              GCTGCC ATAA GGCAGC               TTTTTTTCAGGTTCT 100 50
JC861_RS04875 1093778 .. 1093793 -  -3.3  -2.78813   CCTCATTGCAATAAT              GGAAA TATTAC TTTCC               GGTAAATTGTTGTAA  43 17
        tssB NONE
        tssC 1091590 .. 1091611 -  -4.6   -4.0251   ATTACGACAATTAAA           TATATTTC TGATAT GAAATATA            GATATCATTTTCTCG  61 100
JC861_RS04860 1090959 .. 1091014 - -11.6  -4.35524   TCCGTAAAGGGAAAA CCATACCGCAATACATTATTTATCCGT CTT ACAGATAAATAATA-ATCGCGACATAG TTTTCCTGTATTACA 100 46
JC861_RS20640 1090476 .. 1090510 -  -5.7  -3.53224   TATCCTGTCGTTAAA    GTCAGTGTGCCGGATC AGAT GACGCGG-ACACTGCC     GTATGAATAATCCAG  59 5
        tssF NONE
        tssG NONE
        vgrG NONE
JC861_RS04835 NONE
JC861_RS04830 NONE
JC861_RS04825 NONE
JC861_RS04820 NONE
        tssJ NONE
        tssK NONE
        icmH NONE
        tssM NONE
JC861_RS04795 1073591 .. 1073609 - -13.2  -5.59357   ATCACAGTAAAAAAA             TACCGGGA AAA TCCCGGTA             TTTTTTTGTCCGGAT 100 40
        bamD 1054880 .. 1054909 - -15.3   -3.7821   ATCATGACAAGACAA       TAAAAAAGCCATC CGGA GATGGCTTTTTTA        ATCAGATGAGTAAAA 100 47
        raiA 1054232 .. 1054248 - -15.1  -5.95166   GTCAACCAAAAAAAA              CGCGCCC GGA GGGCGCG              CAGAGACAAAACTCA 100 55
        pheA 1052726 .. 1052746 -  -6.8  -5.05606   CCGAATAAAAATAAA            GGGTGCAG TTTAC CTGCAACC            TCTGATGGTGACAAA  86 132
        epmA 1051674 .. 1051691 - -11.3  -6.23317   ATAAAAATAAAAAAA             GCGGATG ATAT CATCCGC              TTTTTTGTCATGTTT 100 55
JC861_RS04665 1044505 .. 1044515 -  -5.4   -2.7035   GTTATGCATACAGCA                 TCAG TTC CTGA                 AACAGGCGGTGCCCG  49 1
JC861_RS04660 1043100 .. 1043122 -  -9.9  -5.71712   CCGGATACAAAAAAA          CCTGCG-GCA GCAA TGCACGCAGG           TTTTTTTATGGTGAC 100 50
        pepD 1023913 .. 1023934 - -15.9  -5.06505   AAGCACATATAAAAA           CGGCGGAAC AGAT GTTCCGCCG            CTGAACTGAATGCCG 100 44
JC861_RS04550 1021694 .. 1021731 -  -5.9  -3.79668   ATGTAACGCATTAAA   TAAGAGCGATATTT-ATA GTT TATCAAATGTCACTCTTA   TTTTTCAGTACCTCA  63 70
JC861_RS04545 1020584 .. 1020613 - -10.8  -4.84673   TTAAATAATATAAAA       GGCGCCTTTG TCAGCAATCT CAAAGGCGCC        GGTCAGGCGCCTTTG 100 80
JC861_RS04500 1011900 .. 1011929 -  -3.5  -5.28942   CAGCTGAAAGAAAAA       TACCCGCAGCCACC GCA GG-ATCTGCAGGCA       GTATTCCGTGATATG  84 310
        fadE 1007801 .. 1007834 - -10.9  -2.75975   CGGTAAGACAGAGCA     GTCATGGCGGAGCAG GGAA CGGCTCCGCCATGTT      ATTTTATACGCCGGG  77 29
JC861_RS04465 1002927 .. 1002945 -    -3  -3.09018   TGAGTATCTGAAAAC             CGGGCG TCTGGTG CGCCTG             TTTCCGGAATACCGG  43 177
JC861_RS04455 NONE
JC861_RS04450 NONE
        rsmE NONE
        gshB NONE
JC861_RS04430 NONE
        ruvX  996906 ..  996924 -  -5.8  -3.76125   GCATGGTAAGGGAAA             CGGCGCGC CCG GCGTGCGG             GATAATCAGCCGTAA  63 31
JC861_RS04415  995122 ..  995133 -  -2.2  -3.85698   CCGGTTTGTGATAAA                GCAC TAAG GTAC                 AGGAAGGTCATGATA  51 49
JC861_RS04410 NONE
        rdgB NONE
        hemW  992765 ..  992786 -  -8.6  -5.29445   TCTGAATAATAAAAA           CCCGGGCG TGAAAG CGGCCGGG            TTTTTTGTTTTATAA 100 35
        mutY  987486 ..  987496 -  -4.6  -2.94422   CATCCTCAAAAATAG                 GGGC TTT ACCC                 GATTTGCTTAAGCAA  50 20
JC861_RS04365  987161 ..  987187 - -12.4  -3.60525   CGGAGGCAGATACAA         CATCAGAGCC GGAAAAA GGCTCTGATG         ACAGGATTATTTTTC 100 32
        mltC  986010 ..  986046 - -10.2  -4.30441   TCATAACACGTAAAA    TTACCGGCGGACAA TTGCAGATG CTGTCCGCCGGAAA    ACTTAACGGCGGTAG 100 28
JC861_RS04355  985770 ..  985785 - -10.4  -5.37593   CCGGAAAGCAAAAAA              CCAGCC CGAA GGCTGG               TTTCTTTAATTAGTG 100 39
JC861_RS04330 NONE
JC861_RS04325 NONE
         rnz  979746 ..  979756 -  -5.4  -3.21778   CCACTATATCAAAAT                 CTGT GTA ACAG                 TGATAATCACGCCGG  53 52
JC861_RS04315 NONE
JC861_RS04310 NONE
        lldD  975631 ..  975648 - -11.3   -5.8901   ACACAAAACAAAAAA             GCCACTC CGGA GAGTGGC              TTCAGAAGAAAAGTA 100 51
JC861_RS04300 NONE
JC861_RS04295  972726 ..  972756 -  -8.8  -4.82901   GTGTTGTCATAAAAA       GCCTCAGCGGGAGC GAA GCTCCCGCCCGGGA       ATACCGGTCAGTTGT 100 49
JC861_RS04290  971906 ..  971918 -  -5.5  -2.87405   ACATGAACAATATTA                GCGCA TTA TGCAC                CTTTGCGAAATGCCG  50 18
JC861_RS04285  970895 ..  970924 -  -9.3  -3.93695   GTGACCAGTCACAAA       TGCCGTCTGTCAT CGTG ATGAAAGACGGCG        TGCCGCGCAAACATG  78 213
JC861_RS04275  969541 ..  969565 - -14.4   -5.5074   TAACGCAATAAAAAA          GCCGGAAACA CAGAT TGTTTCCGGC          TGACGGCTGTTTTAC 100 72
        betT  967141 ..  967164 - -19.6  -6.04419   AAAAGAATAAAAAAA          CGCGCCGCTC AGAT GAGCGGCGCG           TTTTCAGTGACAGAT 100 41
JC861_RS04260  964943 ..  964968 -   -14  -4.45083   GGGAGAGTCAGAAAA         TGCGGCCGCC GGAAGA GGCAGCCGCA          TGGGGTGGTCAGCGG 100 44
        hpaC  964265 ..  964291 - -15.4  -2.96249   TCTGATGAATAATGA         TTCGTTAACACA TGA TGTGTTAACGAA         TTCTGTAATGATAAA 100 49
        dtpB  962350 ..  962364 -  -9.2  -5.77677   GAAAATAATAAAAAA               CCCGGA TAG CCCGGG               TCCTGAAGAACAGCT 100 99
JC861_RS04210  954446 ..  954458 -  -3.3  -2.61831   GGGACGGGAAAAACC                GGGCA TAG TGACC                TCAGTGTATTGCATT  42 26
JC861_RS04205 NONE
JC861_RS04200 NONE
JC861_RS04195 NONE
JC861_RS04190  950393 ..  950422 -  -6.5  -2.79574   GAGACTGAGTAACGA       TTATC-GCGGAACA GCC TGCGCCGCAGATAA       CTGTACTATTTAATC  55 118
JC861_RS04185  949825 ..  949857 - -19.3  -3.61398   TTGTTGCGTGAATAA      CAAAACCGCCCGGTA TTT TACCGGGCGGTTTTT      TTGTATGAATTATTT 100 35
JC861_RS04140  935410 ..  935434 - -17.3  -3.46602   TCCGCCACATTATAA          CGCCATGCTAT TCA ATAGCATGGCG          TTTTTGTTTTGTGGT 100 116
        rnhA  933906 ..  933931 -  -6.9  -3.53444   CCACGCTGCCTGAAA         CGGC-GCTGA TAACTAT TCAGCCGCCG         GCTGATAACCGGTAT  63 12
        gloB NONE
        mltD  930867 ..  930885 - -11.7  -5.43414   ATCAGATATAAAAAA             GCCCTGC ATCAG GCAGGGC             TTCGGATACGAGAGA 100 46
        mtnN  917093 ..  917112 -  -2.9  -2.75481   GGCGAAGCGCAATGA            TCGTCTGA TCATT TCAG-CGA            ATCAATATTGGCGAG  42 14
        btuF  916235 ..  916255 -  -6.8  -3.61902   GTTTATTACAGATAA            GCCACCCA TACAG CAGGTGGC            ATTAACGCCGCTGAT  65 62
JC861_RS04045  913278 ..  913303 -  -9.7  -4.49556   GCGGTATGAAACAAA         GATCCGGACGC TTTT ACGTCCGGATT          TTTTATCAGCGGGTG 100 31
        hemL  903151 ..  903171 - -11.1  -5.65496   GACGAAAAACAAAAA            CGCCCGG GCAGATG CCGGGCG            TGACGGGTTATGCGG 100 43
JC861_RS03995 NONE
JC861_RS03990  902194 ..  902212 -  -8.2  -3.90002   GATGAAAGCAAAACA             CAAACAGA AAT TCTGTCTG             CTCAACCGCCGGGAA  74 289
JC861_RS03955  895995 ..  896008 -  -3.9  -2.91465   AAGGTAAATTTAAAT               TTGAT TCAG ATCAA                TTAAACAAAATACAC  46 115
        fdnG NONE
        fdxH NONE
        fdnI  891166 ..  891203 - -15.6  -5.42265   TTAAACCATAAAAAA   CTGCGCCGCATTCGTT GCATTG AACGTTTGCGGCGCAG    TTCACAGTTAAAAGC 100 50
JC861_RS03935 NONE
JC861_RS03925 NONE
JC861_RS03920  887227 ..  887239 -  -2.6  -2.84687   CCAATTACGATGACA                GGAG TAATT CCCC                TGACAAAGTGATATT  42 396
        sfsA  879187 ..  879197 -  -6.8   -2.5294   CATGTCTGACAATAT                 CCCT TAG AGGG                 GAAAAATAGGCCGCT  55 168
        dksA  878659 ..  878685 - -13.7  -4.91459   GAAGAGGCAGAAAAA         CGGACGGCGCT GTTAA AGCGCCGTCTG         TGGTGAACCTGTCAG 100 37
      gluQRS NONE
        pcnB NONE
        folK NONE
        panC  874592 ..  874607 -  -8.2  -4.48221   CAGGAACTGACAAAA              GCCCGC TATG ACGGGC               TTCTGGCCTGGTTCC  85 100
         can  865567 ..  865584 - -12.7   -5.0916   TTGTGAATATAAAAA             CGGCACC TGCG GGTGCCG              TTTGCTTTTACAGTG 100 42
JC861_RS03815  862578 ..  862600 -  -2.8  -2.52491   CAGAGAGGGATCAAT           TATTGACAGA GGT TATATCAATA           TAGCGGGTGATAATC  41 111
JC861_RS03810 NONE
JC861_RS03805  860348 ..  860364 -  -5.2  -2.67441   GAAGGTAGTAGATGA              CTAAGA ATAAG TCTTAG              TTTTCGTGATTTTCA  49 22
        uhpC NONE
JC861_RS03795  857863 ..  857888 - -11.1  -4.68512   TTATAATAAAAACAA         GACCGCGCGGCA GAA CACCGCGCGG-C         GGACAACATTATTTA 100 34
JC861_RS03790 NONE
        fbpC  854608 ..  854627 - -13.6  -5.72616   AGTGAGATAAAAAAA            CCGCTTCC GTAA GGAAGCGG             TTTTGTATTCAGGGA 100 45
JC861_RS03775  852267 ..  852288 -  -7.3  -3.63839   GGAGTAAATAATTAA           GCGTAGTAA GTCA TTACTCCGC            TTTTTTCACGGTCAG  68 17
JC861_RS03765  850756 ..  850781 -  -9.9  -3.87373   GAGATTGCTGACAAA         GCAGGATAAAAC GTG GTTTT-TCCTGC         TTTGTGTTATCAGCT  84 145
JC861_RS03755 NONE
JC861_RS03750  847754 ..  847777 -   -14  -5.52384   TTTTTATGAAAAAAA          TGCCTGCAAT ATAT ATTGCAGGCA           CCTGGTGTTGACTTG 100 56
JC861_RS03740  845394 ..  845407 -  -5.3  -3.48276   CTCCCGGTCAGATAA               CAGAA TCCG TTCTG                TCATGGTGTGTCTGC  57 26
JC861_RS03735  842760 ..  842791 -  -6.5  -3.04792   GTACGATGGGGAATA      TTCCGCGTCCGGA CTTTAT TCCGATTGCGGAA       AAGGGCGGCAATATT  53 496
JC861_RS03710  837149 ..  837169 - -14.1  -2.58544   GGGTATTTTCAGAAT            CCGGAGAAA AAC TTTCTCCGG            GGAATAAAAAATAGG  95 334
JC861_RS03705  835688 ..  835704 - -15.1    -5.243   GAAAGCATGAAAAAA              CCGGCCG GTG CGGCCGG              TAAAGGAAAGGGGGC 100 68
JC861_RS03690  831130 ..  831149 -   -10  -4.59773   GTGCAGGCTGAAAAA            GCCCGCGAC TGG GT-GCGGGC            ACATGCGGAAACCCC  95 429
JC861_RS03665  825734 ..  825747 -  -8.1  -2.80443   TCATAGCTCATTATA               TCCGG CTTT CCGGA                ATATGTGACTACCAG  61 263
        xdhA NONE
        xdhB NONE
        xdhC  817042 ..  817065 -  -6.6  -2.96216   TTGCAGCAGCAGACA          CCGCAACCCTG ACG CCGGGC-GCGG          TATCTGTTTTCTGCG  58 43
        nfsB  815898 ..  815921 - -15.3  -3.54638   AGAATGTGTGCCAAA          GCCGCACGG AAGTTA CCGTGCGGC           TTTTTTGTATCAGAT 100 35
        ygeW  812266 ..  812285 - -16.4  -4.18506   TCATCGGGAAAATAA            CCCGGCCG GTGA CGGCCGGG             CTCCGGATTTATAAA 100 34
        dpaL NONE
JC861_RS03610  809760 ..  809781 - -13.7  -4.58395   GGTACTCCTGAAAAA           GCCCCGCAC ATCT GTACGGGGC            CGGTAAGACATAATT 100 39
        hydA  808341 ..  808353 -  -4.8   -4.0257   CGGAAAAATTAATAA                CACC GGTGT GGTG                CTTTAAACGGACGGC  61 6
        arcC  807306 ..  807324 - -17.4  -4.21744   AGGTAACAAAGCAAA             CGGCCGGG GTT CCCGGCCG             TTTTTCACAGAAAAA 100 57
JC861_RS03590  804137 ..  804161 - -17.2  -2.94099   GCGCTGTATCAGATA          CTGACGGCGG AATAA CCGCCGTCAG          TCTGTTTTTAAATAG 100 33
JC861_RS03585  803046 ..  803058 -  -9.1  -4.58395   GGCACGTCGGAAAAA                CGCAG TAT CTGCG                GGCACTCGATGGGCG  90 436
     tetR(D)  799429 ..  799456 -    -4  -4.65819   AAAAGGAAACGAAAA        GCATGCGTGTCA TGGA TGACGCGCCTGA         GCGTACAGGGATGTA  68 70
JC861_RS03550  796223 ..  796248 -  -6.7  -5.26907   TAATATAAAAGAAAA         TCCGCCGTCCG TAAC CGGTAAGCGGA          ATATCGTTTTTTCGG  95 208
JC861_RS03535  793941 ..  793969 -  -9.6  -2.59431   CGTGCTGATAACGGA       CTTTCCGGGTACG GCAG CGTACCCGGAT-G        ATTTCAGGCGCGGAA  68 29
JC861_RS03520  790725 ..  790737 -  -3.5   -3.6579   AAGTGATGTTAACAA                TTAAT GTT ATTAA                TGGGATGGATGTAAT  53 55
        ygfK NONE
        ssnA  785989 ..  786008 -  -3.4  -2.78384   GGTTTTTTTATTACA            GTGCGTCC ATCC GGGCCCAC             ATCTTTTTCGCGGCT  43 1
        ygfM NONE
JC861_RS03500  782241 ..  782264 - -18.2  -4.82901   CTCTGCTTACAAAAA          GCCCTCACCG GAAC CGGTGAGGGC           GGGTTGGTTTAATTA 100 38
        guaD  780872 ..  780886 -  -2.8  -3.08638   AGAATGAAATGAAAG               TGTGTT TTA ATCACA               GCATTGGTGGGCGTC  44 39
JC861_RS03490  779406 ..  779429 - -12.4  -3.36515   CTTTAGCGGCAAATA          CAGGGAGTGC TTTC GCGCTCCCTG           TGATGATAATAATTA  95 71
JC861_RS03485  778829 ..  778847 -   -11  -5.14563   CGGCGCATGAAAAAA             GGGACACA ACG CGTGTCCC             GTTTGCCTGAAAGTG 100 50
JC861_RS03470  775742 ..  775763 -  -3.6  -3.53091   ACGTCTCCCCGGAAA           CCCTGCTG GATAAA CAGCCGGA            CTATATCATCCTCGC  51 237
JC861_RS03350 NONE
JC861_RS03345 NONE
JC861_RS03340  750002 ..  750039 -  -3.4  -3.10597   GGTGGTAGGTAAAAG   GGCGGGATATGCCGCAG ACCGG CTGCGGCATAT-CAGAG   ATAGTGGAAAAATTA  46 38
        nirB NONE
        nirD  746853 ..  746883 - -12.5  -3.42883   AGAATAAACAAGACA       GGCGCGGTACAGG GGATA CCGGTACCGCGCA       ACAATAAAAAACCGT 100 112
JC861_RS03270  732022 ..  732032 -  -4.6  -3.31792   TGAGCAGTGTCATAA                 CACG CTC CGCG                 CCAGAGTAAACCAGT  53 9
        cbiB  731068 ..  731084 -  -2.9  -4.36914   TTTTCCCTTACAAAA              TCCACTG TGC CAGAAGA              TGAATGACGGCAAAT  59 1
JC861_RS03260 NONE
        cbiD NONE
JC861_RS03250 NONE
JC861_RS03245 NONE
JC861_RS03240 NONE
JC861_RS03235 NONE
JC861_RS03230 NONE
JC861_RS03225 NONE
JC861_RS03220 NONE
JC861_RS03215 NONE
JC861_RS03210 NONE
JC861_RS03205 NONE
JC861_RS03200 NONE
JC861_RS03195 NONE
JC861_RS03190 NONE
        cobU NONE
        cobS  717840 ..  717858 -  -8.8  -3.99324   GCGGACCAGGATAAA             GCGGCTGA TGC TCATCCGC             TTACACCCAGAACAG  80 26
        cobC NONE
        cobT NONE
JC861_RS03165  715161 ..  715188 - -14.3  -3.11292   ACCGGTAACAGAAAG        TATGCCCTCTG TATCAG CAGAGGGCATA         TTTATTAAGACAAAA 100 30
JC861_RS03135 NONE
JC861_RS03130  706699 ..  706712 -  -5.3  -2.99471   CCATTTTTACAGATA               TCTGT TTTC ACAGA                CACCGGTTTTCGCTG  52 66
JC861_RS03120  704951 ..  704980 -  -7.3  -3.92001   TATATTATATAACAA       CCTGAAAATAACA GTGC TGTTATTTTCTGA        TAATAATCAATGTTA  72 109
JC861_RS03115 NONE
JC861_RS20620 NONE
JC861_RS03105 NONE
JC861_RS03100  700408 ..  700422 -  -7.1  -3.85698   CTCTGGTGGGATAAA               CGGCA GCGGG TGCCG               GAGAAATTTCTGGTG  66 290
JC861_RS03080  696407 ..  696431 -  -9.3  -4.16681   AATATCACGCGAAAA          GCCGCGCAA TATACAT TTACGCGGC          TTCACCATGTTGTGC  85 221
        mutS  693613 ..  693632 - -13.6  -4.20084   ATTATTCATGCAAAA            GGGGGGAA TTTA TTCCCCCC             TTTTTCTTTTATCCG 100 45
JC861_RS03050  689264 ..  689285 -  -5.8  -5.50723   TGATTAAAACAAAAA           GGGCGGAA TAATAT TTCTGCCC            TTTTTTTGTCCTGTT  90 54
        queD  683983 ..  683996 -  -5.9  -3.62096   GCTGATGAGCTCAAA               CACCC GGTC GGGCG                GCAGCGGGATATTGA  60 207
JC861_RS03010  681943 ..  681963 -  -9.7  -5.74122   CAGGATATAAAAAAA            CCGGGTG TTTTATT CACCCGG            TTTATTGTTTGCTGA 100 58
        metN  671927 ..  671939 -  -3.3  -3.58726   TTCCTTCAGACATAA                CCGAG AAC CTCTG                TTTTTACGTGGTGTT  51 3
JC861_RS02960  671238 ..  671261 -  -4.5  -3.01712   TCGTTCTGTGTAATA          CGCGTTCGCA GTCAG TGCGG-CGCG          GAGAGTGTTTTACTT  50 35
JC861_RS02955  670313 ..  670332 - -12.2  -5.52079   ATAGCAAAACAAAAA            GGGTGAAC AATT GTTCACCC             TCAGTGTAATATTCT 100 89
        rcsF NONE
        tsaA  669006 ..  669017 -  -4.4  -2.64218   AGGTTCCATTAGAAC                GACA AACA TGTC                 TTATCGCAGAGGTAT  45 113
        proS  667213 ..  667247 - -12.5  -3.87869   GGAATCCGGCAGAAA    TA-AAAAAGGCTGAAC AAAT GTTCAGCCTTTTTGTA     TTCACCGCGCTGATA 100 42
         rof  665967 ..  665986 - -13.6  -5.53991   TATGCAGGAAAAAAA            CAACCCCG CGGA CGGGGTTG             CAGAGTTATTCAGGA 100 35
         map NONE
JC861_RS02825 NONE
        glnD NONE
        dapD  639423 ..  639443 -  -6.9  -5.96219   CACGGATAAAAAAAA            TAGCGGA GTTATTA TCCGCTA            TTTCTGAGATTAGTC 100 35
JC861_RS02810  638916 ..  638944 -  -7.4  -4.22883   GATGACGGAAAATAA       CGCCGCAGCAGCC TGAC AGC-ACTGCGGCA        TTGTTTCATCCGGCT  73 39
        queF  635363 ..  635374 -    -3  -2.91395   ATCCCGTGGATAAAT                TGTA GTCG TACA                 GGTTGCGCGCTGTCT  44 44
        ppnN  633924 ..  633946 - -17.8  -3.58905   AGTCGCTATATATAA           TTTCCCCGCC GGC GGCGGGGAAA           CAGTTCAGAGAAAAA 100 44
         xni NONE
JC861_RS02770  632396 ..  632419 -  -6.7  -4.15543   TAAATATCGTTAAAA          TCCCGGC GGATCAGATT GCCGGGA           TTTTTTTATCACTTT  71 34
        csdA NONE
        csdE  627363 ..  627386 -  -2.2  -4.63218   GCCGCCGCAACAAAA          TTCCGCTGGT AACC ACCGGCGGTG           CGGGCGGGCAGATTG  66 384
JC861_RS02730 NONE
JC861_RS02725 NONE
JC861_RS02720  625138 ..  625157 -  -2.1  -4.25104   GTTTTTTCAGGAAAA            GTGACAG GAGAAT CTGTCAG             AAGAATGGTTGCGGG  58 31
        argA  622104 ..  622137 -  -8.2  -4.07687   AGCGGGCCGTGAAAA     CACCCACTCAGC GGTACAGCGG GCTGAGTGAGCG      CTTACGTTAGCCGGA  79 45
        thyA  606997 ..  607014 -  -7.7  -5.50723   TCATGAAAATAAAAA             TCCACGC AATT GCATGGA              TTTTATAGGTTTTCT 100 88
JC861_RS02660  605566 ..  605591 -  -3.9  -3.51279   AGATGCTAGAAAAAT         GCCGCTCTCAAT TTT ATGGTG-GCGGC         GTATGATCTCTTCCC  51 112
JC861_RS02640  598326 ..  598345 -  -7.9   -5.5112   GTGAGTAACAAAAAA            CTGCATC GTAACT GATGCAG             TTTTTTGTATCCGGA 100 252
        thiB NONE
        thiP NONE
        thiQ NONE
JC861_RS02605  588261 ..  588290 -  -3.5  -4.96848   CCGGTGATACAAAAA       CGGCGTTGCATTC ACCG GAAAAAAACACCG        CCAGTCAGAACAGCA  73 136
        rapA  585251 ..  585273 - -15.6  -3.07227   TCACCAAATCAGAGA           CCCGGCAGAC AGT ATCTGCCGGG           ATACAGGTTACTGAT 100 33
        rluA  584072 ..  584086 -  -2.7  -3.96327   ACGGCGGAGCACAAA               GCGGC AATTG GCAGC               AGCAGTCTCAGCAGG  55 513
        surA NONE
        pdxA NONE
        rsmA  577803 ..  577813 -  -4.6  -2.53164   TTATTCATGATGAAT                 CCCC TAT GAGG                 CGGGATGTTCCGCCA  47 18
        apaG NONE
        apaH  576531 ..  576549 - -14.6  -5.49569   TATTAATACAAAAAA             GCAGAGCC ACC GGCTCTGC             TTTTTTCTTGTCTGT 100 54
JC861_RS02550 NONE
JC861_RS02545  574402 ..  574421 - -10.8  -5.73978   ACGATAAATAAAAAA            GGCTGAAT ATTT ATTCAGCC             TTTTTTATTTGGTTT 100 42
        tolC  563829 ..  563842 -  -9.5  -5.77632   AAAAGCACAAAAAAA               CCCGC CGGA GCGGG                TTTATCGTCATATCG 100 49
JC861_RS02500 NONE
JC861_RS02495  561668 ..  561694 - -17.4  -5.24129   TTTCGCTATAAAAAA         TCCCCGCGATAC CGG ATATCGCGGGGA         TTTTTGTTTCAGCCG 100 52
JC861_RS02480  558980 ..  558992 -  -9.1  -3.72893   GATGCTTCCACCAAA                CGCCT GAA AGGCG                AAAGCCGTCCTGTTA  76 344
JC861_RS02460 NONE
JC861_RS02455  551839 ..  551857 - -13.2  -5.63517   GCCTGAAATAAAAAA             GCCGTTCA TCA TGAACGGC             TTTTTTGTTGCCACT 100 15
JC861_RS02440  549376 ..  549389 -  -8.1  -5.28176   GGCAGGCAGAAAAAA               GCTCC CGAA GGAGC                CATCATCTTATTTTT 100 33
        yqhD NONE
        dkgA  547199 ..  547235 - -12.6  -3.86194   AATCTGTCGGATAAA    TAAAAGCCATCAGTAT GATTT ATACTGATGACTTTCA    GGTAATAAAATAAAT 100 40
JC861_RS02410  540666 ..  540676 -  -2.6  -4.81863   AAATTTATAATAAAA                 TATA AAT TATA                 ACAGGATGATAAAGC  67 21
        rpsT  533139 ..  533178 - -13.8  -4.88067   ACTGAGGCAGAAAAA  GGATATAAAAAAACCGGC GTGA GCCGGTTTTTTTATGTCT   GCACAATCAGATTAC 100 37
JC861_RS02360  529830 ..  529846 -  -3.6  -5.67063   CGTATGATAAAAAAA              CCGGAC TAACT GCCCAG              TTTTGTCACAATTAC  89 14
        yaaA  521417 ..  521436 - -13.6  -3.29123   AAAACAAAAAGCATA            CTGCGCCA CGGA TGGCGCAG             CTGAATGACCCGGCT 100 42
        arcA  515098 ..  515126 - -16.7  -5.19212   AGCAGGATCAAAAAA        TCCCCGGTGACGC TGA GCGGCACCGGGAA        TATCGTATGATGTTA 100 54
        yjjX  510620 ..  510640 -  -2.5  -4.88795   ACGGAAGAAAATAAA            TTCAATCAG TTC CTGAATGAT            TACCGGACTGAACAT  71 133
JC861_RS02260  508651 ..  508661 -  -8.2  -3.56099   CAGAACTTCCTGAAA                 GGGC AGC GCCC                 GGCGGATGTACTGAC  67 486
        ettA  504449 ..  504489 -   -17  -3.07816   CTTTTATCCATCCAA  CCAAAAATGCCGCGCGGT TCCTC ACCACGCGGCATTTTCCG  TTATATGACCTACTT 100 35
JC861_RS02225 NONE
JC861_RS02220  499231 ..  499241 -  -2.4  -3.38832   GAGTAATAAATTCAA                 CCCG GTA CTGG                 CAATGATGCCGCTGG  45 360
JC861_RS02135 NONE
JC861_RS02130  482375 ..  482389 -    -5  -3.61774   CAGAAGACGCGGAAA               TGAGAA TTA TCCTCA               CCTGATAATCATTCT  57 46
JC861_RS02125 NONE
JC861_RS02120 NONE
JC861_RS02115  475025 ..  475048 -   -14  -3.94188   AGTTAGCGGAAATAA          TAAAGCCGCT ATTA AGCGGCTTTA           TTTTATTATGGCGGG 100 31
        rsmC NONE
JC861_RS02045 NONE
JC861_RS02040  459531 ..  459563 -  -6.4  -2.96235   GACACATTAATTATA      GGTGTATGATTTTA AGGTA TATAATCATGCACC      TTTTTTGCATTTTAT  56 426
JC861_RS02000  451876 ..  451903 - -15.7  -4.77173   TGCTGATAAAACAAA        CAGCCATACCG TGTCAC CGGTATGGCTG         TTTTCATTGTATTAA 100 37
JC861_RS01990 NONE
JC861_RS20590 NONE
JC861_RS01985  446720 ..  446736 - -13.7  -3.74526   TTATTAAGTGAAGAA              GCCACCC ATT GGGTGGC              TTTTTTGCGTTTGGG 100 365
        fadB  434691 ..  434703 -  -3.3  -4.03234   CTTTTTCCATATAAA                CCTCA CTG TGCGG                TAACAGGGTGACTAT  56 15
        fadA  433383 ..  433403 -  -9.7  -4.90778   TTTATTTAAAGAAAA            TCCCGCC CCCTGAC GGCGGGA            GTATGCTGATAACAG 100 141
        rfaH  429653 ..  429670 -  -7.7  -4.96848   CGCGTCAGATAAAAA             CCGCCTGT AAT AC-GGCGG             TTTTTTGTTTCCGGG  95 54
JC861_RS01860 NONE
        prfH  418834 ..  418853 - -13.6  -5.74288   ATAAAGAAGAAAAAA            GCCGGTCA GTGA TGACCGGC             TTTGTGTTATGTGCT 100 42
        metR  415337 ..  415359 -  -5.5  -2.72344   CTTTATGTGGAACTA          CGGTG-CCAC GCAG GTGGACGCCG           GAACACTCGCGATCA  49 116
JC861_RS01825  409949 ..  409959 -  -2.4  -3.71848   CCTCTTTATTAAGAA                 GACG GCA CGGC                 ATTATCCGCAGAAAT  51 406
JC861_RS01815  408824 ..  408841 - -12.7   -4.3898   AGTAGTGTGATAAAA             CCGGGCT GATA AGCCCGG              TTTTTTGTCCGGGCT 100 40
JC861_RS01800 NONE
JC861_RS01795  404051 ..  404066 - -10.4  -5.37043   ATTTCATATAAAAAA              TCCCGC GTTG GCGGGA               TTTTTTATATCTGTG 100 49
        uvrA  400348 ..  400369 - -14.5  -5.97575   AACGGATAAAAAAAA           TACCGCAGC GGGC GCTGCGGTA            TTTTCAGAATCAGAA 100 45
JC861_RS01780  399683 ..  399715 -  -2.7  -3.57144   TGGCGGAGGTGGAAA     CCATGCGC--AGCCG GATCG CGGATATGCGCACGG     TGCTGGTGGATACCC  51 301
JC861_RS01760  394861 ..  394889 - -18.9  -4.89339   AATCAGTGATAAAAA        TGCCCGCCGTTTC TCA GAACCGGCGGGCA        TTTTACATTCTGCGG 100 44
JC861_RS01750 NONE
JC861_RS01745  390842 ..  390870 - -17.6  -3.29144   TCAGTCCCCGGACAA        TACTCCCCGGAA CAGTC TTCCGGGGAGTA        TTTTTTCGTTTTACC 100 36
JC861_RS01735 NONE
JC861_RS01730  388227 ..  388267 - -12.6  -3.00946   TGCCGGTATAAACCA GACCGGCATGCAGCGCCAC ATCA GCGGCGCTGCAT-CATGTC  AGTGTTCAGGCGAAC  93 24
         zur  387018 ..  387046 -    -6  -4.57569   GTATCCGCTTAAAAA       CCACAGTATGCCG GAGA CGGT-CACTGTGG        TTTTTGTTTTTCAGC  73 36
        plsB  383211 ..  383232 - -13.1  -5.45652   ACCGGCAATAAAAAA           GGAGATTGG CTGC CCAATCTCC            TTTTTTTTGTACTCA 100 54
        lysC  375257 ..  375269 -  -4.1  -4.21812   TTTCAGGCAAAATAA                CCTGT CAG ACAGA                TGATGTTACTTTGCG  61 433
         edd NONE
JC861_RS01655  367411 ..  367428 - -12.7  -5.64274   GGACTGATAAAAAAA             GCCACCG CGGA CGGTGGC              AAAAGGCAGACTAAT 100 52
        purH NONE
        purD  357330 ..  357354 - -10.1  -2.56046   GTAAATGGGAACCTA          CGGAAGATTCA CTG TAAATCTCCCG          CAGGTTATTAACGCT  70 43
JC861_RS01575 NONE
JC861_RS01570 NONE
JC861_RS01565  349857 ..  349872 -  -3.2  -3.31501   ATGAATTTGTGATAA              CG-CGCC ATG GACGGCG              GATTGAGTGTGAGAT  47 40
JC861_RS01560 NONE
JC861_RS01555 NONE
JC861_RS01550  347239 ..  347254 - -10.4  -3.96148   CGGCCGCAGCAGAAA              GCCTGC ATCA GCAGGC               GGGGCAACTTATGCA  81 148
        thiC NONE
        thiE NONE
JC861_RS01530 NONE
        thiS NONE
JC861_RS01520 NONE
        thiH  339748 ..  339771 -   -11  -5.24989   GGATAGACTAAAAAA          CAAGGCCGGT CTTC ACCGGCCTTT           TTACATCATCGTCCC 100 31
JC861_RS01500  336086 ..  336113 - -17.2  -2.70263   TTATATAACAACTCA        CGGCCTGATAAT CACG ATTATCAGGCCG         TTTTTTTACGGAATA 100 43
JC861_RS01405  314280 ..  314300 -  -7.6  -5.94713   ACCGGACAAAAAAAA           GCGCATTCC TGAC GGA-TGCGC            TTTTTTTATGTCCGT 100 47
JC861_RS01365 NONE
JC861_RS20585 NONE
JC861_RS20580 NONE
JC861_RS01355  301623 ..  301635 -  -4.1  -4.21439   TAACCGGAACAGAAA                CCAGT AAT ACTGA                ACATAATAACGTTGG  61 163
JC861_RS01350  300687 ..  300701 -  -7.1  -3.23216   CCGCACCATGATTAA               CAGCC TGGAC GGCTG               ATAAGGTAAAGAGAG  62 497
        murQ NONE
        murP  297163 ..  297181 - -14.6  -4.83593   AATAATCATGAAAAA             CAGACCGC ATT GCGGTCTG             TTTTTGTATCACTCC 100 48
JC861_RS01315 NONE
JC861_RS01310  294464 ..  294485 -  -6.5  -2.70932   CCTCCGGCTGAATCA           GCCG-CGGAA TTC TGCCGACGGC           ATGATGTTGAGTGTT  54 1
JC861_RS01305  293536 ..  293558 -   -15  -4.19177   ATTTTTGAACATAAA           CCGGGTAATA CAT TATTACCCGG           TTTTTTTATCGCTTG 100 31
         crp  292115 ..  292132 - -12.7  -5.62288   TTAAGAAAAGAAAAA             CAGGCGC AATT GCGCCTG              TTTTGGTGATAAAGG 100 50
        yihA  287783 ..  287812 -  -8.7  -4.58424   GATGATTACAGAAAA       GAACAGATGGTCA GTAA TAACCATCTGTTT        CGGGAGGGGATCACT 100 36
JC861_RS01265 NONE
JC861_RS01260  286985 ..  287019 - -12.9  -2.75074   TTTAGCTGAATATTA     GCTGCTCCGGTCAGA CAACT TCTGACCGGAGCATT     TTTTTTGTCCTGAAT  91 56
         def  285894 ..  285925 -  -9.4  -3.91897   GGCCGCACTCAGAAA      TCCGGGTCACATAC TGAT GTATGCTCCCCGGA       TTTCTTCCTTTGCCG  83 217
        mobB  279183 ..  279193 -  -2.6  -3.92659   TTTTTAAAACGTAAA                 TAAT AAG ATTA                 AATGGTTTTTTCAGG  54 121
JC861_RS01225  278733 ..  278753 - -10.4  -4.84761   ATAGTGGCATAAAAA            CGCCGGAA TATAT CTCCGGCG            CTTCATTATTTATTC 100 48
         idi NONE
JC861_RS01215  277316 ..  277327 -  -4.4  -5.13648   TAAACAGAAATAAAA                TCAC TATG GTGA                 ATACGCGATTAAGTA  78 427
JC861_RS01210  276464 ..  276479 - -10.4  -3.70033   TATGAAGATATAGAA              GGGCAG TTAT CTGCCC               TTAAAAAGATAACGA  82 57
JC861_RS01205 NONE
JC861_RS01200 NONE
JC861_RS01195  271514 ..  271524 -  -3.2  -3.52506   AATGAAAGTTAAATA                 CCGT AGC ACAG                 AATTCTCCTTCAGTT  49 39
JC861_RS01190  270671 ..  270686 -  -2.6  -3.96842   AGGGTAATACAAGAA              TTGATA TTAT CATCAA               TAAAACAGAACAGAC  54 190
JC861_RS01170  267139 ..  267164 -  -8.3  -2.78547   TCATCTGACTAATTA         TTTCGGCGGCT TAAG AGCAACCGAAA          TTTAACCGGGCCTGC  64 76
        yhjD  265461 ..  265498 -    -5  -3.03159   GCAACTGTCTGAATA  TCAGCC-G-GTAACGGTT CAGT ATCCGTTACACTGACTGA   TATTCATACCATATT  50 53
JC861_RS01155 NONE
JC861_RS01150  264151 ..  264169 - -11.8  -3.88114   AATATGAAATAAAGA             GGGTATCT GTA AGATACCC             TTTTTTTATGACTAT 100 37
JC861_RS01100  252109 ..  252133 - -12.9  -3.50572   AGTGATGTTACAGAA          TAGAGCCCGGT CTG ACCGGGCTTTA          TTTTTTACTGACCAG 100 30
JC861_RS01085 NONE
JC861_RS01080  247386 ..  247427 -    -8  -3.85698   TGTGTTGTGCAGAAA CCGGTGCGTGCCGGGCGGTG ACCG CACCATC-GGCA-GAACCGG TTTCAGGAGATGCGG  69 141
JC861_RS01070  245448 ..  245479 - -15.3  -3.52481   AAACAGGGCAGATAA      CCGGAACCGGAGCA GGTAT TG-TCCGGTTCCGG      GCGGGGCGGATGCGG 100 41
         gmk NONE
        rpoZ  244231 ..  244242 -  -2.2    -3.452   TTCAAACAGGTACAA                GGCA GACC TACC                 TTAACTTAACGACGT  47 31
        spoT NONE
        trmH NONE
        recG  239294 ..  239311 -  -8.4  -3.13164   CGCTTAAGCAGGCAA             GCCACC TTCCGG GGTGGC              TTTTTTCGTTATACG  67 34
JC861_RS01035  236372 ..  236400 -   -11  -2.69151   TTTCCGCACAGAGCA       GCACGCGTGACCG TTTC CGGTCACGCG-GT        TAAACAGATGATTAT  76 37
JC861_RS01030  234482 ..  234499 - -12.7  -5.38958   ACCGATAAAGAAAAA             CAGCGCC TTAC GGCGCTG              TTTCTGTATTAGCAG 100 47
        glnA  228122 ..  228143 - -11.5  -4.46212   CCCCGCAGGAGAAAA           GGACCCGCC CAAC GGCGGGTCA            AGTGCTTCACGGCAA 100 97
        glnL NONE
        glnG  225201 ..  225215 -  -2.8   -4.2243   AGAAAGACCTGAAAA               CCTG GTATGCA CAGG               TGGAAGAGCACGGCA  60 348
JC861_RS00975  221259 ..  221282 -  -8.8  -4.95155   GTCAGATGAGAAAAA          TCCGCG-CGGT GAT ACCGGCGCGGT          TTTTTTGTCTCTGTT 100 41
JC861_RS00950  216087 ..  216114 - -14.3  -3.57971   ATATTCACCCGTAAA        CAGTCAGGCTT TTTGAC AAGCCTGACTG         TCTGACAATGGTTAT 100 37
JC861_RS00945 NONE
JC861_RS00940 NONE
JC861_RS00935 NONE
JC861_RS00930  211033 ..  211053 - -12.6  -2.85056   ATCCGTAAGGCAAAT            GCCGGTCA TCACC TGACCGGC            GTTTTCAATTCAGCG  89 30
JC861_RS00880  200647 ..  200673 - -13.1  -3.61103   TAACGGGAGGGGAAA        GTACG-GGCAGC AGGC GCTGCCGCGTAC         AGGATACCGAGGGGA 100 42
        feoB NONE
JC861_RS00865  197445 ..  197455 -  -2.6  -4.04157   TTAATAAAAAACGAA                 TAAT TTA ATTA                 AAAAGGATTCGTTTT  54 50
JC861_RS00860  196365 ..  196390 -    -9  -5.37345   GGTAATCAGAAAAAA         GCCGGTCAGT TTAATC ACCAACCGGC          TTTTGCCGAATTCTG 100 56
        gntX NONE
        nfuA  194141 ..  194163 - -11.2   -2.7263   AGCACCGCCGGAAAC           CCGCCCGGCA GTT CACCGGACGG           TGTATATCACGGCCG  76 83
        glpE NONE
        glpG  192851 ..  192888 -  -3.5  -3.19602   CCGGTCAGATCAATA   CCACCGCATAGTCA GGATCGTGCTG TGAC-AGGCGGTGG   TGGTGTCATATTGTC  48 49
JC861_RS00830  192035 ..  192058 -   -16  -3.38603   AAAGAGGGTGAAATA          CCGCGCCACC GGGC GGTGACGCGG           GCGGAGAAAATCAGC 100 36
        glpD  190330 ..  190354 - -15.8    -5.626   GAGGTGATAAAAAAA          CAGACCGGCT TTGTG AGCCGGTCTG          CGTTGTTATCTTACT 100 36
JC861_RS00810  186753 ..  186768 - -10.4  -5.13473   AGCAGAGGTAAAAAA              TGCCGC ATGT GCGGCA               TTTTTTTGCTCAGTA 100 35
JC861_RS00800  183103 ..  183126 - -16.8  -5.60993   TTTCTGATAAAAAAA          GCCCGGTAAC ATCA GTTACCGGGC           TTTGCATTTGCTGTG 100 53
        proP  178811 ..  178832 - -11.5  -5.74288   ATAAACAATAAAAAA           GCCCGCGTC CGGA GAGGCGGGC            CTGAGCAGGACATCA 100 38
        phrB  177296 ..  177331 -    -9  -3.07233   TTATAATCTGGAACA    TCTGCTGACCTACAGCA CTG TGCGGC-GGTCAGCAGG    TAAAGCAGATTAACC  69 35
        megL  172408 ..  172456 -  -3.2  -4.77986   TTAAATACTTAAAAA GCACGCCGGAGAGAATTCAGAGTG GCT CTCAATGAATTTT-TCCG-CGTGC TTCGTGTACTCACCC  68 105
JC861_RS00760  170812 ..  170832 - -15.5  -5.58454   TTCAGACGAAAAAAA            GCGGGAGAT GAT ATCTCCCGC            AATATGCTAACCAAT 100 203
JC861_RS00685  153001 ..  153035 - -13.8  -4.75289   GACTATAATATAAAA     TAAACCACCCGATATT GAT AATACAGGGTGGTTTA     TATGAGAGGTGCAGC 100 46
JC861_RS00680  152096 ..  152114 -  -8.8  -5.50499   TTACAGTCAAAAAAA             CCGGGC TGATTTT GCCCGG             TTTCTGGTGTCTGAA 100 64
JC861_RS00675 NONE
JC861_RS00670 NONE
JC861_RS00665  148125 ..  148158 - -10.6  -3.91716   TCAGGCGGGAAATAA     CAGATACC-GTAATA CGATT TATTACCGGTATCTG     TTTTGTATGCGGGGA  89 46
JC861_RS00660 NONE
JC861_RS00655  146122 ..  146152 -    -9  -2.97747   CTGCCATAGCAGAGA       GGGATGTCCCTGCC AGA AACAGAGACATCAC       AGATAATGATATAAA  68 83
JC861_RS00650 NONE
JC861_RS00645  142599 ..  142632 - -13.1  -3.07043   GGTATCAGCTGAATA     CCGGCCGCCGCCCGGA TAA TCCGGACGGC-GCTGA     TATCAGTCAAACTGT  95 28
        sodA  136878 ..  136902 - -15.1  -3.94877   AGCGGGGAAGAAGAA          TATGTGCGGAC AAT GCCCGCACATA          TTTCAGAACTTATTT 100 35
        yiiM NONE
JC861_RS00575  126200 ..  126225 - -16.1  -4.82667   GCATCAGAGTAAAAA         GCGCCTCCGGT CTGC ACCGGGGGCGC          TTTTTTTACGGCGGA 100 43
JC861_RS00550  120319 ..  120340 -  -4.3  -5.24449   GATAAACTGAAAAAA           GCGCCCC GGAATGAA GCGGCGC            TTTTTTTATATCCGT  78 40
        mrcA  108029 ..  108046 - -12.7  -5.81412   GCGATTGAAAAAAAA             GGCTGCC CTCA GGCAGCC              CTTGTCTGTTTATCA 100 46
JC861_RS00480  104917 ..  104937 - -16.9  -2.98942   ACTCCGTGACAGACA            GTGCAGCCG TTA CGGCTGCAC            CTCAGAAGAAGGGTA 100 14
        hslR NONE
        hslO  103513 ..  103540 - -20.6  -5.63012   AAAAATAAACAAAAA        GGCCGCGCCCGGG AAA CCCGG-CGCGGCC        TGGTGTTGCGTCAGC 100 50
        pckA  101677 ..  101711 - -12.9  -4.77165   GCCGGCACAATAAAA    CAGAAAGCCCCGGATC ATCT GACCCGGGGCTA-CTG     TGTTGCTCACACTAC 100 57
        pitA   97274 ..   97293 - -12.2  -5.58454   CGGATACGAAAAAAA            GCCTGACA CATG TGTCAGGC             TTTTCAGTTTCAGAG 100 56
        uspA   96082 ..   96099 - -11.3  -5.81412   TTCAGCCAAAAAAAA             TGCCTGC ATAA GCAGGCA              TTTCAGATGAATAAT 100 55
        gdhA   94317 ..   94334 -  -2.6  -4.21314   AATAATATCTGAAAA             GGGGAC AGGGCA GTTCCC              GTTTCGCGAAGGGGT  57 111
JC861_RS00415 NONE
JC861_RS00410   89693 ..   89722 - -15.1   -2.9547   AAACACATCGATATA       GCCATCTTTGCGC CCGG GCGTAAAGATGGC        TATTAAGTATTACTT 100 35
JC861_RS20530   76023 ..   76036 -  -3.8  -2.91735   TCAACACGCGACACA               TCGC TTTAAT GCGA                AACTCTGCCTGATGT  46 60
JC861_RS00335   75198 ..   75210 -  -3.3  -3.04398   CTTCCCCTCCAAAAG                TGGAC ACA GTCCT                AAGCGAGGTTCTGGT  44 24
JC861_RS00330 NONE
JC861_RS00325   74525 ..   74547 - -10.6    -5.626   TAGCGCATAAAAAAA           CGGCAGAC TGTGAAC GTCTGCCG           TCAGGGGAGATGTAA 100 62
JC861_RS00320 NONE
JC861_RS00315 NONE
JC861_RS00310 NONE
JC861_RS00305   70970 ..   70988 -  -3.8  -3.20991   CCCAACGTAATTCAA             GCTGCA GGCTGAG CGCAGC             CAACGAACCTGCGGT  48 384
JC861_RS00255   59085 ..   59097 -  -4.9  -3.99324   GGTTATCACTATAAA                GATAA TCA TTATC                TTTACTTGTAAAAAT  61 43
JC861_RS00250   58285 ..   58312 - -11.4  -2.92613   TTTTATCTGAAATCA        TAAGACACCGGA CTCA CCCAGTGTCTTA         TATTCTTCACTATTT  83 35
JC861_RS00235   54272 ..   54307 -  -6.8  -3.08679   GTCTGTCAGCGAATA    TCCGC-ATGTGATCCGC TGG GCGGAACAGATTGCGGC    ACGTCCGGCTGTTCA  56 178
JC861_RS00205 NONE
        mdtD   45464 ..   45476 -  -3.4  -3.86897   GCTATCTGGCAGAAA                GGAT TACGT ATCC                CGCAGGATATTGCGG  55 231
JC861_RS00165   38894 ..   38912 - -10.3  -5.65177   ATAGTGATAAAAAAA             TTGCCGG GGATA CCGGCAA             TGCTGTTAATCAGTA 100 51
        ravA NONE
        viaA   35642 ..   35660 - -10.2  -2.72511   GGCAGCCGGTGAAAT             GCCGCAGA CTA TCGGCGGC             GGGATCGGCCAGTCA  67 169
        asnC NONE
        mioC   33355 ..   33374 -  -5.1  -4.13872   AGGTAATTATATAAA            GATCTTT TTATTT AAAGATC             TCTTTATTAGATCTT  65 275
        mnmG NONE
        rsmG   30663 ..   30695 -    -7  -4.89063   CTACGGAAAAACAAA     GGGACGGTG-CAG AAAATGCG CTGACTCCGTCCC      CTTAAAAATATTTCT  82 62
        atpI   29749 ..   29764 -    -4  -3.04398   CTTTGTTGTTAAAAC              CGCTAA CCGC TTAGCA               CGGCCGGTGCGATAA  47 12
        atpB NONE
        atpE NONE
        atpF NONE
        atpH NONE
        atpA   25945 ..   25969 -   -10  -2.93723   TCCTCATGAACCAGA          CGGCCTGTAC TGTTC ACACAGGCCG          TTTAGTATTACCAGG  73 33
        atpG   25053 ..   25070 -  -3.4  -3.08314   CGTAATTCGTAAAAC             CCG-GGT GTTAA ACCGCGG             CAGCACCGGACACAA  46 15
        atpD NONE
JC861_RS00085   23149 ..   23172 - -13.2  -5.15969   TCGCAACGCAAAAAA          GCCAGTCAGC AGAT ACTGACTGGC           TTTTATATTTTAACT 100 48
        glmU NONE
        glmS   19698 ..   19728 - -11.8  -6.06723   CCGGGTAAAAAAAAA       GCCGGAGTGCATCA CAA CGATGCGCTCCGGG       CCTGAATCTTTAATT 100 65
JC861_RS00070   18040 ..   18056 -  -2.1  -4.87665   CCTGATTGAGAAAAA              TGCGGCC AAT GTCCGTA              CAGGTGTGACAATCG  68 288
         asd   12867 ..   12898 -  -2.3  -6.28967   CACAAACAAAAAAAA      TGACTCATGTG GAAAAATCAG CACATGAGCCC       ATCACTTTGTATCTA  93 56
JC861_RS00045 NONE
JC861_RS00040 NONE
        glsA    8115 ..    8130 - -11.8  -3.91144   TTTATATCTGACAAA              GCCCGG AAAT CCGGGC               TTTGTCGTTATCCGT 100 45
JC861_RS00030 NONE
JC861_RS00025    6074 ..    6089 - -11.8  -3.91144   CTGAGACCTGATAAA              GCCCGG ATTT CCGGGC               TTTATTTTTTTCCGG 100 58
JC861_RS20520    3381 ..    3397 - -10.9  -2.78384   GCTGCGGTTAGCACA              GGGTGAA TAT TTCACCC              GTCAGAGCGGGCAGC  70 335
