locus-tag class description IR188_RS00005 PF07729 FCD domain IR188_RS00005 PF00392 Bacterial regulatory proteins, gntR family IR188_RS00010 PF07690 Major Facilitator Superfamily IR188_RS00015 PF00356 Bacterial regulatory proteins, lacI family IR188_RS00020 PF00294 pfkB family carbohydrate kinase IR188_RS00025 PF13407 Periplasmic binding protein domain IR188_RS00030 PF02653 Branched-chain amino acid transport system / permease component IR188_RS00035 PF00005 ABC transporter IR188_RS00040 PF05025 RbsD / FucU transport protein family IR188_RS00045 PF18416 N-acetylglucosamine binding protein domain 2 IR188_RS00045 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading IR188_RS00050 PF12592 Protein of unknown function (DUF3763) IR188_RS00050 PF07728 AAA domain (dynein-related subfamily) IR188_RS00050 PF17868 AAA lid domain IR188_RS00055 PF05762 VWA domain containing CoxE-like protein IR188_RS00060 PF03590 Aspartate-ammonia ligase IR188_RS00065 PF01037 Lrp/AsnC ligand binding domain IR188_RS00070 PF00258 Flavodoxin IR188_RS00075 PF01134 Glucose inhibited division protein A IR188_RS00075 PF13932 GidA associated domain IR188_RS00080 PF02527 rRNA small subunit methyltransferase G IR188_RS00085 PF03899 ATP synthase I chain IR188_RS00090 PF00119 ATP synthase A chain IR188_RS00095 PF00137 ATP synthase subunit C IR188_RS00100 PF00430 ATP synthase B/B' CF(0) IR188_RS00105 PF00213 ATP synthase delta (OSCP) subunit IR188_RS00110 PF02874 ATP synthase alpha/beta family, beta-barrel domain IR188_RS00110 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IR188_RS00110 PF00306 ATP synthase alpha/beta chain, C terminal domain IR188_RS00115 PF00231 ATP synthase IR188_RS00120 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IR188_RS00120 PF02874 ATP synthase alpha/beta family, beta-barrel domain IR188_RS00125 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain IR188_RS00125 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain IR188_RS00130 PF00132 Bacterial transferase hexapeptide (six repeats) IR188_RS00130 PF12804 MobA-like NTP transferase domain IR188_RS00135 PF01380 SIS domain IR188_RS00140 PF08722 TnsA endonuclease N terminal IR188_RS00140 PF08721 TnsA endonuclease C terminal IR188_RS00145 PF00665 Integrase core domain IR188_RS00150 PF13401 AAA domain IR188_RS00150 PF11426 Tn7 transposition regulator TnsC IR188_RS00155 PF06527 TniQ IR188_RS00155 PF15978 Tn7-like transposition protein D IR188_RS00160 PF18623 TnsE C-terminal domain IR188_RS00185 PF13427 Domain of unknown function (DUF4111) IR188_RS00185 PF01909 Nucleotidyltransferase domain IR188_RS00190 PF00583 Acetyltransferase (GNAT) family IR188_RS00195 PF00589 Phage integrase family IR188_RS00195 PF13495 Phage integrase, N-terminal SAM-like domain IR188_RS00200 PF00589 Phage integrase family IR188_RS00200 PF13495 Phage integrase, N-terminal SAM-like domain IR188_RS00210 PF02203 Tar ligand binding domain homologue IR188_RS00210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IR188_RS00210 PF00672 HAMP domain IR188_RS00215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IR188_RS00215 PF08447 PAS fold IR188_RS00225 PF00480 ROK family IR188_RS00230 PF02774 Semialdehyde dehydrogenase, dimerisation domain IR188_RS00230 PF01118 Semialdehyde dehydrogenase, NAD binding domain IR188_RS00235 PF00282 Pyridoxal-dependent decarboxylase conserved domain IR188_RS00240 PF13520 Amino acid permease IR188_RS00245 PF04960 Glutaminase IR188_RS00250 PF13520 Amino acid permease IR188_RS00260 PF01751 Toprim domain IR188_RS00260 PF00204 DNA gyrase B IR188_RS00260 PF00986 DNA gyrase B subunit, carboxyl terminus IR188_RS00260 PF18053 DNA gyrase B subunit insert domain IR188_RS00260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IR188_RS00265 PF02463 RecF/RecN/SMC N terminal domain IR188_RS00270 PF02767 DNA polymerase III beta subunit, central domain IR188_RS00270 PF02768 DNA polymerase III beta subunit, C-terminal domain IR188_RS00270 PF00712 DNA polymerase III beta subunit, N-terminal domain IR188_RS00275 PF00308 Bacterial dnaA protein IR188_RS00275 PF08299 Bacterial dnaA protein helix-turn-helix IR188_RS00275 PF11638 DnaA N-terminal domain IR188_RS00280 PF00468 Ribosomal protein L34 IR188_RS00285 PF00825 Ribonuclease P IR188_RS00290 PF01809 Putative membrane protein insertion efficiency factor IR188_RS00295 PF14849 YidC periplasmic domain IR188_RS00295 PF02096 60Kd inner membrane protein IR188_RS00300 PF01926 50S ribosome-binding GTPase IR188_RS00300 PF10396 GTP-binding protein TrmE N-terminus IR188_RS00300 PF12631 MnmE helical domain IR188_RS00305 PF00892 EamA-like transporter family IR188_RS00315 PF03544 Gram-negative bacterial TonB protein C-terminal IR188_RS00345 PF02634 FdhD/NarQ family IR188_RS00355 PF13247 4Fe-4S dicluster domain IR188_RS00355 PF09163 Formate dehydrogenase N, transmembrane IR188_RS00360 PF01292 Prokaryotic cytochrome b561 IR188_RS00365 PF04216 Protein involved in formate dehydrogenase formation IR188_RS00370 PF03841 L-seryl-tRNA selenium transferase IR188_RS00370 PF12390 Selenocysteine synthase N terminal IR188_RS00375 PF09106 Elongation factor SelB, winged helix IR188_RS00375 PF00009 Elongation factor Tu GTP binding domain IR188_RS00375 PF03144 Elongation factor Tu domain 2 IR188_RS00375 PF09107 Elongation factor SelB, winged helix IR188_RS00390 PF03459 TOBE domain IR188_RS00390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IR188_RS00400 PF07690 Major Facilitator Superfamily IR188_RS00420 PF03595 Voltage-dependent anion channel IR188_RS00425 PF00860 Permease family IR188_RS00440 PF03755 YicC-like family, N-terminal region IR188_RS00440 PF08340 Domain of unknown function (DUF1732) IR188_RS00445 PF01138 3' exoribonuclease family, domain 1 IR188_RS00445 PF03725 3' exoribonuclease family, domain 2 IR188_RS00450 PF00156 Phosphoribosyl transferase domain IR188_RS00455 PF00440 Bacterial regulatory proteins, tetR family IR188_RS00460 PF00692 dUTPase IR188_RS00465 PF02441 Flavoprotein IR188_RS00465 PF04127 DNA / pantothenate metabolism flavoprotein IR188_RS00470 PF04002 RadC-like JAB domain IR188_RS00475 PF00830 Ribosomal L28 family IR188_RS00480 PF00471 Ribosomal protein L33 IR188_RS00485 PF00535 Glycosyl transferase family 2 IR188_RS00495 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain IR188_RS00495 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain IR188_RS00495 PF06827 Zinc finger found in FPG and IleRS IR188_RS00500 PF01467 Cytidylyltransferase-like IR188_RS00505 PF00535 Glycosyl transferase family 2 IR188_RS00510 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) IR188_RS00515 PF01075 Glycosyltransferase family 9 (heptosyltransferase) IR188_RS00535 PF01075 Glycosyltransferase family 9 (heptosyltransferase) IR188_RS00540 PF01075 Glycosyltransferase family 9 (heptosyltransferase) IR188_RS00545 PF01370 NAD dependent epimerase/dehydratase family IR188_RS00555 PF04748 Divergent polysaccharide deacetylase IR188_RS00560 PF01551 Peptidase family M23 IR188_RS00565 PF00581 Rhodanese-like domain IR188_RS00570 PF02556 Preprotein translocase subunit SecB IR188_RS00575 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus IR188_RS00575 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus IR188_RS00580 PF06426 Serine acetyltransferase, N-terminal IR188_RS00580 PF00132 Bacterial transferase hexapeptide (six repeats) IR188_RS00585 PF00588 SpoU rRNA Methylase family IR188_RS00590 PF01370 NAD dependent epimerase/dehydratase family IR188_RS00605 PF00535 Glycosyl transferase family 2 IR188_RS00615 PF01467 Cytidylyltransferase-like IR188_RS00625 PF13477 Glycosyl transferase 4-like IR188_RS00625 PF00534 Glycosyl transferases group 1 IR188_RS00630 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase IR188_RS00635 PF12804 MobA-like NTP transferase domain IR188_RS00650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IR188_RS00650 PF16527 Two-component sensor protein CpxA, periplasmic domain IR188_RS00650 PF00672 HAMP domain IR188_RS00650 PF00512 His Kinase A (phospho-acceptor) domain IR188_RS00655 PF00486 Transcriptional regulatory protein, C terminal IR188_RS00655 PF00072 Response regulator receiver domain IR188_RS00665 PF13018 Extended Signal Peptide of Type V secretion system IR188_RS00665 PF03797 Autotransporter beta-domain IR188_RS00665 PF03212 Pertactin IR188_RS00665 PF16168 Adhesin of bacterial autotransporter system, probable stalk IR188_RS00670 PF00365 Phosphofructokinase IR188_RS00675 PF00121 Triosephosphate isomerase IR188_RS00680 PF07305 Protein of unknown function (DUF1454) IR188_RS00685 PF05656 Protein of unknown function (DUF805) IR188_RS00690 PF00175 Oxidoreductase NAD-binding domain IR188_RS00690 PF00970 Oxidoreductase FAD-binding domain IR188_RS00695 PF07690 Major Facilitator Superfamily IR188_RS00700 PF03009 Glycerophosphoryl diester phosphodiesterase family IR188_RS00705 PF07690 Major Facilitator Superfamily IR188_RS00710 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IR188_RS00710 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IR188_RS00715 PF00230 Major intrinsic protein IR188_RS00720 PF06005 Cell division protein ZapB IR188_RS00725 PF03737 Aldolase/RraA IR188_RS00730 PF01040 UbiA prenyltransferase family IR188_RS00735 PF00004 ATPase family associated with various cellular activities (AAA) IR188_RS00735 PF07724 AAA domain (Cdc48 subfamily) IR188_RS00735 PF10431 C-terminal, D2-small domain, of ClpB protein IR188_RS00740 PF00227 Proteasome subunit IR188_RS00745 PF05036 Sporulation related domain IR188_RS00750 PF00356 Bacterial regulatory proteins, lacI family IR188_RS00755 PF17764 3′ DNA-binding domain (3′BD) IR188_RS00755 PF18319 PriA DNA helicase Cys-rich region (CRR) domain IR188_RS00755 PF18074 Primosomal protein N C-terminal domain IR188_RS00755 PF00270 DEAD/DEAH box helicase IR188_RS00755 PF00271 Helicase conserved C-terminal domain IR188_RS00760 PF01197 Ribosomal protein L31 IR188_RS00765 PF01340 Met Apo-repressor, MetJ IR188_RS00770 PF01053 Cys/Met metabolism PLP-dependent enzyme IR188_RS00775 PF00696 Amino acid kinase family IR188_RS00775 PF03447 Homoserine dehydrogenase, NAD binding domain IR188_RS00775 PF00742 Homoserine dehydrogenase IR188_RS00780 PF00311 Phosphoenolpyruvate carboxylase IR188_RS00790 PF02627 Carboxymuconolactone decarboxylase family IR188_RS00795 PF02219 Methylenetetrahydrofolate reductase IR188_RS00800 PF01546 Peptidase family M20/M25/M40 IR188_RS00800 PF07687 Peptidase dimerisation domain IR188_RS00805 PF02774 Semialdehyde dehydrogenase, dimerisation domain IR188_RS00805 PF01118 Semialdehyde dehydrogenase, NAD binding domain IR188_RS00810 PF00696 Amino acid kinase family IR188_RS00815 PF00764 Arginosuccinate synthase IR188_RS00820 PF00206 Lyase IR188_RS00820 PF14698 Argininosuccinate lyase C-terminal IR188_RS00830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IR188_RS00830 PF03466 LysR substrate binding domain IR188_RS00835 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IR188_RS00835 PF07992 Pyridine nucleotide-disulphide oxidoreductase IR188_RS00840 PF00440 Bacterial regulatory proteins, tetR family IR188_RS00845 PF07226 Protein of unknown function (DUF1422) IR188_RS00855 PF04220 Der GTPase activator (YihI) IR188_RS00865 PF06969 HemN C-terminal domain IR188_RS00865 PF04055 Radical SAM superfamily IR188_RS00870 PF00072 Response regulator receiver domain IR188_RS00870 PF00158 Sigma-54 interaction domain IR188_RS00870 PF02954 Bacterial regulatory protein, Fis family IR188_RS00875 PF00512 His Kinase A (phospho-acceptor) domain IR188_RS00875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IR188_RS00880 PF03951 Glutamine synthetase, beta-Grasp domain IR188_RS00880 PF00120 Glutamine synthetase, catalytic domain IR188_RS00885 PF00009 Elongation factor Tu GTP binding domain IR188_RS00885 PF00679 Elongation factor G C-terminus IR188_RS00885 PF03144 Elongation factor Tu domain 2 IR188_RS00890 PF13419 Haloacid dehalogenase-like hydrolase IR188_RS00895 PF02580 D-Tyr-tRNA(Tyr) deacylase IR188_RS00900 PF09500 Putative thioesterase (yiiD_Cterm) IR188_RS00900 PF00583 Acetyltransferase (GNAT) family IR188_RS00905 PF05170 AsmA family IR188_RS00910 PF00860 Permease family IR188_RS00915 PF03616 Sodium/glutamate symporter IR188_RS00920 PF17191 RecG wedge domain IR188_RS00920 PF00271 Helicase conserved C-terminal domain IR188_RS00920 PF00270 DEAD/DEAH box helicase IR188_RS00925 PF12105 SpoU, rRNA methylase, C-terminal IR188_RS00925 PF00588 SpoU rRNA Methylase family IR188_RS00930 PF04607 Region found in RelA / SpoT proteins IR188_RS00930 PF13291 ACT domain IR188_RS00930 PF02824 TGS domain IR188_RS00935 PF01192 RNA polymerase Rpb6 IR188_RS00940 PF00625 Guanylate kinase IR188_RS00945 PF03458 UPF0126 domain IR188_RS00950 PF07676 WD40-like Beta Propeller Repeat IR188_RS00950 PF12566 Protein of unknown function (DUF3748) IR188_RS00955 PF07119 Protein of unknown function (DUF1375) IR188_RS00960 PF03352 Methyladenine glycosylase IR188_RS00965 PF02091 Glycyl-tRNA synthetase alpha subunit IR188_RS00970 PF05746 DALR anticodon binding domain IR188_RS00970 PF02092 Glycyl-tRNA synthetase beta subunit IR188_RS00975 PF05860 haemagglutination activity domain IR188_RS00975 PF13332 Hemagglutinin repeat IR188_RS00975 PF04829 Pre-toxin domain with VENN motif IR188_RS00975 PF15526 Novel toxin 21 IR188_RS00975 PF05594 Haemagluttinin repeat IR188_RS00990 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IR188_RS00995 PF00528 Binding-protein-dependent transport system inner membrane component IR188_RS01000 PF00528 Binding-protein-dependent transport system inner membrane component IR188_RS01000 PF12911 N-terminal TM domain of oligopeptide transport permease C IR188_RS01005 PF00005 ABC transporter IR188_RS01005 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IR188_RS01010 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IR188_RS01010 PF00005 ABC transporter IR188_RS01015 PF00563 EAL domain IR188_RS01015 PF17154 Gammaproteobacterial periplasmic sensor domain IR188_RS01015 PF00990 Diguanylate cyclase, GGDEF domain IR188_RS01015 PF00672 HAMP domain IR188_RS01020 PF05193 Peptidase M16 inactive domain IR188_RS01020 PF00675 Insulinase (Peptidase family M16) IR188_RS01030 PF01361 Tautomerase enzyme IR188_RS01035 PF03631 Virulence factor BrkB IR188_RS01045 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ IR188_RS01050 PF07992 Pyridine nucleotide-disulphide oxidoreductase IR188_RS01050 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IR188_RS01070 PF00293 NUDIX domain IR188_RS01080 PF12804 MobA-like NTP transferase domain IR188_RS01085 PF06288 Protein of unknown function (DUF1040) IR188_RS01090 PF01636 Phosphotransferase enzyme family IR188_RS01095 PF01323 DSBA-like thioredoxin domain IR188_RS01100 PF00476 DNA polymerase family A IR188_RS01100 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain IR188_RS01100 PF01367 5'-3' exonuclease, C-terminal SAM fold IR188_RS01100 PF01612 3'-5' exonuclease IR188_RS01105 PF01327 Polypeptide deformylase IR188_RS01110 PF01926 50S ribosome-binding GTPase IR188_RS01115 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD IR188_RS01120 PF00117 Glutamine amidotransferase class-I IR188_RS01125 PF00202 Aminotransferase class-III IR188_RS01130 PF13545 Crp-like helix-turn-helix domain IR188_RS01130 PF00027 Cyclic nucleotide-binding domain IR188_RS01135 PF02566 OsmC-like protein IR188_RS01140 PF00485 Phosphoribulokinase / Uridine kinase family IR188_RS01145 PF06794 Uncharacterised protein family (UPF0270) IR188_RS01150 PF00561 alpha/beta hydrolase fold IR188_RS01160 PF00367 phosphotransferase system, EIIB IR188_RS01160 PF02378 Phosphotransferase system, EIIC IR188_RS01165 PF13580 SIS domain IR188_RS01170 PF01380 SIS domain IR188_RS01170 PF01418 Helix-turn-helix domain, rpiR family IR188_RS01175 PF00005 ABC transporter IR188_RS01175 PF12848 ABC transporter IR188_RS01180 PF02525 Flavodoxin-like fold IR188_RS01185 PF02254 TrkA-N domain IR188_RS01185 PF00999 Sodium/hydrogen exchanger family IR188_RS01190 PF09526 Probable metal-binding protein (DUF2387) IR188_RS01195 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IR188_RS01200 PF04102 SlyX IR188_RS01205 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase IR188_RS01205 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IR188_RS01210 PF08348 YheO-like PAS domain IR188_RS01210 PF13309 HTH domain IR188_RS01215 PF02635 DsrE/DsrF-like family IR188_RS01220 PF02635 DsrE/DsrF-like family IR188_RS01230 PF00164 Ribosomal protein S12/S23 IR188_RS01235 PF00177 Ribosomal protein S7p/S5e IR188_RS01240 PF00009 Elongation factor Tu GTP binding domain IR188_RS01240 PF14492 Elongation Factor G, domain II IR188_RS01240 PF03144 Elongation factor Tu domain 2 IR188_RS01240 PF03764 Elongation factor G, domain IV IR188_RS01240 PF00679 Elongation factor G C-terminus IR188_RS01245 PF00009 Elongation factor Tu GTP binding domain IR188_RS01245 PF03144 Elongation factor Tu domain 2 IR188_RS01245 PF03143 Elongation factor Tu C-terminal domain IR188_RS01250 PF00584 SecE/Sec61-gamma subunits of protein translocation complex IR188_RS01255 PF02357 Transcription termination factor nusG IR188_RS01255 PF00467 KOW motif IR188_RS01260 PF03946 Ribosomal protein L11, N-terminal domain IR188_RS01260 PF00298 Ribosomal protein L11, RNA binding domain IR188_RS01265 PF00687 Ribosomal protein L1p/L10e family IR188_RS01270 PF00466 Ribosomal protein L10 IR188_RS01275 PF16320 Ribosomal protein L7/L12 dimerisation domain IR188_RS01275 PF00542 Ribosomal protein L7/L12 C-terminal domain IR188_RS01280 PF04563 RNA polymerase beta subunit IR188_RS01280 PF04560 RNA polymerase Rpb2, domain 7 IR188_RS01280 PF04561 RNA polymerase Rpb2, domain 2 IR188_RS01280 PF04565 RNA polymerase Rpb2, domain 3 IR188_RS01280 PF10385 RNA polymerase beta subunit external 1 domain IR188_RS01280 PF00562 RNA polymerase Rpb2, domain 6 IR188_RS01285 PF04983 RNA polymerase Rpb1, domain 3 IR188_RS01285 PF05000 RNA polymerase Rpb1, domain 4 IR188_RS01285 PF04997 RNA polymerase Rpb1, domain 1 IR188_RS01285 PF00623 RNA polymerase Rpb1, domain 2 IR188_RS01285 PF04998 RNA polymerase Rpb1, domain 5 IR188_RS01290 PF01522 Polysaccharide deacetylase IR188_RS01295 PF13411 MerR HTH family regulatory protein IR188_RS01300 PF01053 Cys/Met metabolism PLP-dependent enzyme IR188_RS01305 PF01235 Sodium:alanine symporter family IR188_RS01310 PF06968 Biotin and Thiamin Synthesis associated domain IR188_RS01310 PF04055 Radical SAM superfamily IR188_RS01315 PF05690 Thiazole biosynthesis protein ThiG IR188_RS01320 PF02597 ThiS family IR188_RS01325 PF00899 ThiF family IR188_RS01330 PF02581 Thiamine monophosphate synthase IR188_RS01335 PF01964 Radical SAM ThiC family IR188_RS01335 PF13667 ThiC-associated domain IR188_RS01340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IR188_RS01340 PF02203 Tar ligand binding domain homologue IR188_RS01340 PF00672 HAMP domain IR188_RS01350 PF08402 TOBE domain IR188_RS01350 PF00005 ABC transporter IR188_RS01375 PF09297 NADH pyrophosphatase zinc ribbon domain IR188_RS01375 PF00293 NUDIX domain IR188_RS01380 PF01208 Uroporphyrinogen decarboxylase (URO-D) IR188_RS01385 PF04493 Endonuclease V IR188_RS01390 PF04222 Protein of unknown function (DUF416) IR188_RS01395 PF00216 Bacterial DNA-binding protein IR188_RS01400 PF07356 Protein of unknown function (DUF1481) IR188_RS01405 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain IR188_RS01405 PF02843 Phosphoribosylglycinamide synthetase, C domain IR188_RS01405 PF02844 Phosphoribosylglycinamide synthetase, N domain IR188_RS01410 PF02142 MGS-like domain IR188_RS01410 PF01808 AICARFT/IMPCHase bienzyme IR188_RS01440 PF04204 Homoserine O-succinyltransferase IR188_RS01445 PF01081 KDPG and KHG aldolase IR188_RS01450 PF00920 Dehydratase family IR188_RS01455 PF02574 Homocysteine S-methyltransferase IR188_RS01455 PF00809 Pterin binding enzyme IR188_RS01455 PF02965 Vitamin B12 dependent methionine synthase, activation domain IR188_RS01455 PF02607 B12 binding domain IR188_RS01455 PF02310 B12 binding domain IR188_RS01465 PF00696 Amino acid kinase family IR188_RS01465 PF01842 ACT domain IR188_RS01470 PF00342 Phosphoglucose isomerase IR188_RS01475 PF04345 Chorismate lyase IR188_RS01480 PF01040 UbiA prenyltransferase family IR188_RS01485 PF01553 Acyltransferase IR188_RS01490 PF01219 Prokaryotic diacylglycerol kinase IR188_RS01495 PF00717 Peptidase S24-like IR188_RS01495 PF01726 LexA DNA binding domain IR188_RS01500 PF01475 Ferric uptake regulator family IR188_RS01505 PF04073 Aminoacyl-tRNA editing domain IR188_RS01510 PF01381 Helix-turn-helix IR188_RS01515 PF01381 Helix-turn-helix IR188_RS01520 PF07690 Major Facilitator Superfamily IR188_RS01550 PF10065 Uncharacterized conserved protein (DUF2303) IR188_RS01620 PF01555 DNA methylase IR188_RS01635 PF05866 Endodeoxyribonuclease RusA IR188_RS01645 PF06147 Protein of unknown function (DUF968) IR188_RS01660 PF01555 DNA methylase IR188_RS01685 PF00959 Phage lysozyme IR188_RS01725 PF00574 Clp protease IR188_RS01830 PF01207 Dihydrouridine synthase (Dus) IR188_RS01840 PF00107 Zinc-binding dehydrogenase IR188_RS01840 PF08240 Alcohol dehydrogenase GroES-like domain IR188_RS01845 PF00772 DnaB-like helicase N terminal domain IR188_RS01845 PF03796 DnaB-like helicase C terminal domain IR188_RS01850 PF01168 Alanine racemase, N-terminal domain IR188_RS01850 PF00842 Alanine racemase, C-terminal domain IR188_RS01855 PF00155 Aminotransferase class I and II IR188_RS01860 PF01258 Prokaryotic dksA/traR C4-type zinc finger IR188_RS01865 PF00005 ABC transporter IR188_RS01865 PF17755 UvrA DNA-binding domain IR188_RS01865 PF17760 UvrA interaction domain IR188_RS01870 PF00436 Single-strand binding protein family IR188_RS01875 PF00665 Integrase core domain IR188_RS01875 PF13333 Integrase core domain IR188_RS01875 PF13276 HTH-like domain IR188_RS01890 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IR188_RS01890 PF00205 Thiamine pyrophosphate enzyme, central domain IR188_RS01890 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IR188_RS01895 PF01842 ACT domain IR188_RS01915 PF00860 Permease family IR188_RS01920 PF00999 Sodium/hydrogen exchanger family IR188_RS01925 PF00892 EamA-like transporter family IR188_RS01930 PF03466 LysR substrate binding domain IR188_RS01930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IR188_RS01935 PF01717 Cobalamin-independent synthase, Catalytic domain IR188_RS01935 PF08267 Cobalamin-independent synthase, N-terminal domain IR188_RS01940 PF00472 RF-1 domain IR188_RS01950 PF01048 Phosphorylase superfamily IR188_RS01955 PF13350 Tyrosine phosphatase family IR188_RS01960 PF09335 SNARE associated Golgi protein IR188_RS01965 PF02646 RmuC family IR188_RS01970 PF01209 ubiE/COQ5 methyltransferase family IR188_RS01975 PF02036 SCP-2 sterol transfer family IR188_RS01980 PF03109 ABC1 family IR188_RS01985 PF02416 mttA/Hcf106 family IR188_RS01995 PF00902 Sec-independent protein translocase protein (TatC) IR188_RS02000 PF02357 Transcription termination factor nusG IR188_RS02005 PF03575 Peptidase family S51 IR188_RS02010 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase IR188_RS02015 PF00175 Oxidoreductase NAD-binding domain IR188_RS02015 PF00970 Oxidoreductase FAD-binding domain IR188_RS02020 PF02803 Thiolase, C-terminal domain IR188_RS02020 PF00108 Thiolase, N-terminal domain IR188_RS02025 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IR188_RS02025 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IR188_RS02025 PF00378 Enoyl-CoA hydratase/isomerase IR188_RS02030 PF00557 Metallopeptidase family M24 IR188_RS02035 PF09186 Domain of unknown function (DUF1949) IR188_RS02035 PF01205 Uncharacterized protein family UPF0029 IR188_RS02040 PF02386 Cation transport protein IR188_RS02045 PF12724 Flavodoxin domain IR188_RS02080 PF01915 Glycosyl hydrolase family 3 C-terminal domain IR188_RS02080 PF00933 Glycosyl hydrolase family 3 N terminal domain IR188_RS02090 PF03466 LysR substrate binding domain IR188_RS02090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IR188_RS02095 PF00005 ABC transporter IR188_RS02105 PF00245 Alkaline phosphatase IR188_RS02110 PF02690 Na+/Pi-cotransporter IR188_RS02135 PF08468 Methyltransferase small domain N-terminal IR188_RS02135 PF05175 Methyltransferase small domain IR188_RS02140 PF03603 DNA polymerase III psi subunit IR188_RS02145 PF00583 Acetyltransferase (GNAT) family IR188_RS02155 PF00009 Elongation factor Tu GTP binding domain IR188_RS02155 PF03144 Elongation factor Tu domain 2 IR188_RS02155 PF16658 Class II release factor RF3, C-terminal domain IR188_RS02165 PF01734 Patatin-like phospholipase IR188_RS02170 PF01026 TatD related DNase IR188_RS02175 PF07662 Na+ dependent nucleoside transporter C-terminus IR188_RS02175 PF07670 Nucleoside recognition IR188_RS02175 PF01773 Na+ dependent nucleoside transporter N-terminus IR188_RS02180 PF01791 DeoC/LacD family aldolase IR188_RS02185 PF02885 Glycosyl transferase family, helical bundle domain IR188_RS02185 PF00591 Glycosyl transferase family, a/b domain IR188_RS02185 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain IR188_RS02190 PF01676 Metalloenzyme superfamily IR188_RS02195 PF01048 Phosphorylase superfamily IR188_RS02200 PF05193 Peptidase M16 inactive domain IR188_RS02200 PF00675 Insulinase (Peptidase family M16) IR188_RS02205 PF00005 ABC transporter IR188_RS02205 PF06472 ABC transporter transmembrane region 2 IR188_RS02210 PF07715 TonB-dependent Receptor Plug Domain IR188_RS02230 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IR188_RS02235 PF00528 Binding-protein-dependent transport system inner membrane component IR188_RS02240 PF00528 Binding-protein-dependent transport system inner membrane component IR188_RS02240 PF12911 N-terminal TM domain of oligopeptide transport permease C IR188_RS02245 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IR188_RS02245 PF00005 ABC transporter IR188_RS02250 PF00547 Urease, gamma subunit IR188_RS02255 PF00699 Urease beta subunit IR188_RS02260 PF00449 Urease alpha-subunit, N-terminal domain IR188_RS02260 PF01979 Amidohydrolase family IR188_RS02265 PF02814 UreE urease accessory protein, N-terminal domain IR188_RS02265 PF05194 UreE urease accessory protein, C-terminal domain IR188_RS02270 PF01730 UreF IR188_RS02275 PF02492 CobW/HypB/UreG, nucleotide-binding domain IR188_RS02280 PF01774 UreD urease accessory protein IR188_RS02285 PF03253 Urea transporter IR188_RS02290 PF02254 TrkA-N domain IR188_RS02290 PF07885 Ion channel IR188_RS02295 PF04632 Fusaric acid resistance protein family IR188_RS02300 PF02537 CrcB-like protein, Camphor Resistance (CrcB) IR188_RS02305 PF10144 Bacterial virulence factor haemolysin IR188_RS02310 PF18429 Domain of unknown function (DUF5609) IR188_RS02315 PF18073 Rubredoxin metal binding domain IR188_RS02320 PF13521 AAA domain IR188_RS02320 PF01381 Helix-turn-helix IR188_RS02325 PF00005 ABC transporter IR188_RS02325 PF12848 ABC transporter IR188_RS02335 PF14718 Soluble lytic murein transglycosylase L domain IR188_RS02335 PF01464 Transglycosylase SLT domain IR188_RS02340 PF01371 Trp repressor protein IR188_RS02355 PF01931 Protein of unknown function DUF84 IR188_RS02360 PF00300 Histidine phosphatase superfamily (branch 1) IR188_RS02365 PF12833 Helix-turn-helix domain IR188_RS02365 PF06445 GyrI-like small molecule binding domain IR188_RS02370 PF05981 CreA protein IR188_RS02375 PF00486 Transcriptional regulatory protein, C terminal IR188_RS02375 PF00072 Response regulator receiver domain IR188_RS02385 PF03447 Homoserine dehydrogenase, NAD binding domain IR188_RS02385 PF00696 Amino acid kinase family IR188_RS02385 PF01842 ACT domain IR188_RS02385 PF13840 ACT domain IR188_RS02385 PF00742 Homoserine dehydrogenase IR188_RS02390 PF00288 GHMP kinases N terminal domain IR188_RS02390 PF08544 GHMP kinases C terminal IR188_RS02395 PF14821 Threonine synthase N terminus IR188_RS02395 PF00291 Pyridoxal-phosphate dependent enzyme IR188_RS02400 PF03883 Peroxide stress protein YaaA IR188_RS02405 PF00923 Transaldolase/Fructose-6-phosphate aldolase IR188_RS02410 PF00994 Probable molybdopterin binding domain IR188_RS02415 PF07690 Major Facilitator Superfamily IR188_RS02420 PF00012 Hsp70 protein IR188_RS02425 PF00226 DnaJ domain IR188_RS02425 PF01556 DnaJ C terminal domain IR188_RS02425 PF00684 DnaJ central domain IR188_RS02435 PF06965 Na+/H+ antiporter 1 IR188_RS02440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IR188_RS02440 PF03466 LysR substrate binding domain IR188_RS02445 PF01649 Ribosomal protein S20 IR188_RS02450 PF01687 Riboflavin kinase IR188_RS02450 PF06574 FAD synthetase IR188_RS02455 PF00133 tRNA synthetases class I (I, L, M and V) IR188_RS02455 PF06827 Zinc finger found in FPG and IleRS IR188_RS02455 PF08264 Anticodon-binding domain of tRNA IR188_RS02460 PF01252 Signal peptidase (SPase) II IR188_RS02465 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IR188_RS02470 PF02401 LytB protein IR188_RS02475 PF05173 Dihydrodipicolinate reductase, C-terminus IR188_RS02475 PF01113 Dihydrodipicolinate reductase, N-terminus IR188_RS02480 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain IR188_RS02480 PF00117 Glutamine amidotransferase class-I IR188_RS02485 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain IR188_RS02485 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IR188_RS02485 PF02142 MGS-like domain IR188_RS02490 PF05658 Head domain of trimeric autotransporter adhesin IR188_RS02490 PF05662 Coiled stalk of trimeric autotransporter adhesin IR188_RS02490 PF03895 YadA-like membrane anchor domain IR188_RS02495 PF00248 Aldo/keto reductase family IR188_RS02500 PF00465 Iron-containing alcohol dehydrogenase IR188_RS02505 PF09335 SNARE associated Golgi protein IR188_RS02510 PF01618 MotA/TolQ/ExbB proton channel family IR188_RS02515 PF02472 Biopolymer transport protein ExbD/TolR IR188_RS02520 PF01966 HD domain IR188_RS02520 PF12627 Probable RNA and SrmB- binding site of polymerase A IR188_RS02520 PF01743 Poly A polymerase head domain IR188_RS02525 PF08239 Bacterial SH3 domain IR188_RS02530 PF01928 CYTH domain IR188_RS02535 PF08335 GlnD PII-uridylyltransferase IR188_RS02535 PF03710 Glutamate-ammonia ligase adenylyltransferase IR188_RS02540 PF00294 pfkB family carbohydrate kinase IR188_RS02540 PF01467 Cytidylyltransferase-like IR188_RS02545 PF04380 Membrane fusogenic activity IR188_RS02550 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase IR188_RS02555 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase IR188_RS02560 PF03738 Glutathionylspermidine synthase preATP-grasp IR188_RS02565 PF06693 Protein of unknown function (DUF1190) IR188_RS02570 PF02321 Outer membrane efflux protein IR188_RS02575 PF00293 NUDIX domain IR188_RS02580 PF00149 Calcineurin-like phosphoesterase IR188_RS02585 PF05728 Uncharacterised protein family (UPF0227) IR188_RS02590 PF00986 DNA gyrase B subunit, carboxyl terminus IR188_RS02590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IR188_RS02590 PF01751 Toprim domain IR188_RS02590 PF00204 DNA gyrase B IR188_RS02595 PF00521 DNA gyrase/topoisomerase IV, subunit A IR188_RS02595 PF03989 DNA gyrase C-terminal domain, beta-propeller IR188_RS02600 PF01553 Acyltransferase IR188_RS02605 PF07731 Multicopper oxidase IR188_RS02605 PF07732 Multicopper oxidase IR188_RS02615 PF01810 LysE type translocator IR188_RS02620 PF00186 Dihydrofolate reductase IR188_RS02625 PF00149 Calcineurin-like phosphoesterase IR188_RS02630 PF04379 ApaG domain IR188_RS02635 PF00398 Ribosomal RNA adenine dimethylase IR188_RS02640 PF04166 Pyridoxal phosphate biosynthetic protein PdxA IR188_RS02645 PF09312 SurA N-terminal domain IR188_RS02650 PF04453 LPS transport system D IR188_RS02650 PF03968 OstA-like protein IR188_RS02655 PF05099 Tellurite resistance protein TerB IR188_RS02655 PF00226 DnaJ domain IR188_RS02660 PF00849 RNA pseudouridylate synthase IR188_RS02665 PF00176 SNF2 family N-terminal domain IR188_RS02665 PF12137 RNA polymerase recycling family C-terminal IR188_RS02665 PF00271 Helicase conserved C-terminal domain IR188_RS02665 PF18337 RapA N-terminal Tudor like domain IR188_RS02665 PF18339 RapA N-terminal Tudor like domain 1 IR188_RS02670 PF03104 DNA polymerase family B, exonuclease domain IR188_RS02670 PF00136 DNA polymerase family B IR188_RS02675 PF00005 ABC transporter IR188_RS02680 PF00528 Binding-protein-dependent transport system inner membrane component IR188_RS02690 PF00293 NUDIX domain IR188_RS02695 PF00391 PEP-utilising enzyme, mobile domain IR188_RS02695 PF02896 PEP-utilising enzyme, TIM barrel domain IR188_RS02695 PF05524 PEP-utilising enzyme, N-terminal IR188_RS02695 PF01590 GAF domain IR188_RS02700 PF01790 Prolipoprotein diacylglyceryl transferase IR188_RS02705 PF00303 Thymidylate synthase IR188_RS02715 PF07963 Prokaryotic N-terminal methylation motif IR188_RS02730 PF17946 RecC C-terminal domain IR188_RS02735 PF00675 Insulinase (Peptidase family M16) IR188_RS02735 PF16187 Middle or third domain of peptidase_M16 IR188_RS02735 PF05193 Peptidase M16 inactive domain IR188_RS02740 PF13361 UvrD-like helicase C-terminal domain IR188_RS02740 PF00580 UvrD/REP helicase N-terminal domain IR188_RS02740 PF12705 PD-(D/E)XK nuclease superfamily IR188_RS02745 PF13538 UvrD-like helicase C-terminal domain IR188_RS02750 PF00583 Acetyltransferase (GNAT) family IR188_RS02750 PF00696 Amino acid kinase family IR188_RS02755 PF11741 AMIN domain IR188_RS02755 PF01520 N-acetylmuramoyl-L-alanine amidase IR188_RS02775 PF06725 3D domain IR188_RS02775 PF03562 MltA specific insert domain IR188_RS02780 PF00899 ThiF family IR188_RS02785 PF02657 Fe-S metabolism associated domain IR188_RS02790 PF00266 Aminotransferase class-V IR188_RS02795 PF03466 LysR substrate binding domain IR188_RS02795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IR188_RS02800 PF04241 Protein of unknown function (DUF423) IR188_RS02805 PF01728 FtsJ-like methyltransferase IR188_RS02805 PF18125 RlmM ferredoxin-like domain IR188_RS02815 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain IR188_RS02815 PF01367 5'-3' exonuclease, C-terminal SAM fold IR188_RS02820 PF03641 Possible lysine decarboxylase IR188_RS02820 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases IR188_RS02820 PF11892 Domain of unknown function (DUF3412) IR188_RS02825 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term IR188_RS02825 PF14489 QueF-like protein IR188_RS02830 PF07348 Syd protein (SUKH-2) IR188_RS02835 PF04287 tRNA pseudouridine synthase C IR188_RS02840 PF00849 RNA pseudouridylate synthase IR188_RS02845 PF00258 Flavodoxin IR188_RS02850 PF11944 Protein of unknown function (DUF3461) IR188_RS02855 PF00132 Bacterial transferase hexapeptide (six repeats) IR188_RS02855 PF14602 Hexapeptide repeat of succinyl-transferase IR188_RS02855 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal IR188_RS02860 PF01966 HD domain IR188_RS02860 PF08335 GlnD PII-uridylyltransferase IR188_RS02860 PF01842 ACT domain IR188_RS02870 PF00557 Metallopeptidase family M24 IR188_RS02875 PF00318 Ribosomal protein S2 IR188_RS02880 PF00889 Elongation factor TS IR188_RS02885 PF00696 Amino acid kinase family IR188_RS02890 PF01765 Ribosome recycling factor IR188_RS02895 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain IR188_RS02895 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase IR188_RS02895 PF13288 DXP reductoisomerase C-terminal domain IR188_RS02900 PF01255 Putative undecaprenyl diphosphate synthase IR188_RS02910 PF17820 PDZ domain IR188_RS02910 PF02163 Peptidase family M50 IR188_RS02915 PF07244 Surface antigen variable number repeat IR188_RS02915 PF01103 Surface antigen IR188_RS02920 PF03938 Outer membrane protein (OmpH-like) IR188_RS02925 PF00132 Bacterial transferase hexapeptide (six repeats) IR188_RS02925 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD IR188_RS02930 PF07977 FabA-like domain IR188_RS02935 PF00132 Bacterial transferase hexapeptide (six repeats) IR188_RS02935 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 IR188_RS02940 PF02684 Lipid-A-disaccharide synthetase IR188_RS02945 PF01351 Ribonuclease HII IR188_RS02950 PF17657 Bacterial DNA polymerase III alpha subunit finger domain IR188_RS02950 PF07733 Bacterial DNA polymerase III alpha NTPase domain IR188_RS02950 PF01336 OB-fold nucleic acid binding domain IR188_RS02950 PF02811 PHP domain IR188_RS02950 PF14579 Helix-hairpin-helix motif IR188_RS02955 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit IR188_RS02960 PF09179 TilS substrate binding domain IR188_RS02960 PF11734 TilS substrate C-terminal domain IR188_RS02960 PF01171 PP-loop family IR188_RS02965 PF07073 Modulator of Rho-dependent transcription termination (ROF) IR188_RS02970 PF04170 NlpE N-terminal domain IR188_RS02970 PF17185 NlpE C-terminal OB domain IR188_RS02975 PF03129 Anticodon binding domain IR188_RS02975 PF04073 Aminoacyl-tRNA editing domain IR188_RS02975 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IR188_RS02980 PF18389 TrmO C-terminal domain IR188_RS02980 PF01980 tRNA-methyltransferase O IR188_RS02985 PF16358 RcsF lipoprotein IR188_RS02990 PF03180 NLPA lipoprotein IR188_RS02995 PF00528 Binding-protein-dependent transport system inner membrane component IR188_RS03000 PF09383 NIL domain IR188_RS03000 PF00005 ABC transporter IR188_RS03030 PF03372 Endonuclease/Exonuclease/phosphatase family IR188_RS03045 PF00324 Amino acid permease IR188_RS03050 PF04055 Radical SAM superfamily IR188_RS03055 PF01242 6-pyruvoyl tetrahydropterin synthase IR188_RS03060 PF00667 FAD binding domain IR188_RS03060 PF00258 Flavodoxin IR188_RS03060 PF00175 Oxidoreductase NAD-binding domain IR188_RS03065 PF04977 Septum formation initiator IR188_RS03070 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase IR188_RS03075 PF02542 YgbB family IR188_RS03080 PF01142 tRNA pseudouridine synthase D (TruD) IR188_RS03085 PF17263 Family of unknown function (DUF5329) IR188_RS03090 PF01975 Survival protein SurE IR188_RS03100 PF01551 Peptidase family M23 IR188_RS03100 PF01476 LysM domain IR188_RS03105 PF04545 Sigma-70, region 4 IR188_RS03105 PF04542 Sigma-70 region 2 IR188_RS03105 PF00140 Sigma-70 factor, region 1.2 IR188_RS03105 PF04539 Sigma-70 region 3 IR188_RS03110 PF01624 MutS domain I IR188_RS03110 PF05190 MutS family domain IV IR188_RS03110 PF00488 MutS domain V IR188_RS03110 PF05188 MutS domain II IR188_RS03110 PF05192 MutS domain III IR188_RS03145 PF00939 Sodium:sulfate symporter transmembrane region IR188_RS03150 PF12833 Helix-turn-helix domain IR188_RS03155 PF00440 Bacterial regulatory proteins, tetR family IR188_RS03175 PF00375 Sodium:dicarboxylate symporter family IR188_RS03180 PF05683 Fumarase C-terminus IR188_RS03180 PF05681 Fumarate hydratase (Fumerase) IR188_RS03185 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP IR188_RS03190 PF01435 Peptidase family M48 IR188_RS03195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IR188_RS03195 PF03466 LysR substrate binding domain IR188_RS03200 PF02277 Phosphoribosyltransferase IR188_RS03205 PF00300 Histidine phosphatase superfamily (branch 1) IR188_RS03210 PF02654 Cobalamin-5-phosphate synthase IR188_RS03215 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase IR188_RS03220 PF07685 CobB/CobQ-like glutamine amidotransferase domain IR188_RS03225 PF00005 ABC transporter IR188_RS03230 PF02361 Cobalt transport protein IR188_RS03235 PF02553 Cobalt transport protein component CbiN IR188_RS03240 PF01891 Cobalt uptake substrate-specific transmembrane region IR188_RS03245 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IR188_RS03250 PF06180 Cobalt chelatase (CbiK) IR188_RS03255 PF02571 Precorrin-6x reductase CbiJ/CobK IR188_RS03260 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IR188_RS03265 PF11760 Cobalamin synthesis G N-terminal IR188_RS03265 PF11761 Cobalamin biosynthesis central region IR188_RS03265 PF01890 Cobalamin synthesis G C-terminus IR188_RS03270 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IR188_RS03275 PF05175 Methyltransferase small domain IR188_RS03280 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IR188_RS03285 PF01888 CbiD IR188_RS03290 PF02570 Precorrin-8X methylmutase IR188_RS03295 PF03186 CobD/Cbib protein IR188_RS03300 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain IR188_RS03300 PF07685 CobB/CobQ-like glutamine amidotransferase domain IR188_RS03305 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IR188_RS03305 PF14824 Sirohaem biosynthesis protein central IR188_RS03305 PF10414 Sirohaem synthase dimerisation region IR188_RS03310 PF00155 Aminotransferase class I and II IR188_RS03315 PF00288 GHMP kinases N terminal domain IR188_RS03320 PF10414 Sirohaem synthase dimerisation region IR188_RS03320 PF14824 Sirohaem biosynthesis protein central IR188_RS03320 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IR188_RS03325 PF02310 B12 binding domain IR188_RS03330 PF13941 MutL protein IR188_RS03335 PF06368 Methylaspartate mutase E chain (MutE) IR188_RS03340 PF05034 Methylaspartate ammonia-lyase N-terminus IR188_RS03340 PF07476 Methylaspartate ammonia-lyase C-terminus IR188_RS03355 PF00375 Sodium:dicarboxylate symporter family IR188_RS03360 PF13806 Rieske-like [2Fe-2S] domain IR188_RS03365 PF18267 Rubredoxin NAD+ reductase C-terminal domain IR188_RS03365 PF07992 Pyridine nucleotide-disulphide oxidoreductase IR188_RS03365 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain IR188_RS03365 PF01077 Nitrite and sulphite reductase 4Fe-4S domain IR188_RS03365 PF04324 BFD-like [2Fe-2S] binding domain IR188_RS03370 PF07690 Major Facilitator Superfamily IR188_RS03375 PF01261 Xylose isomerase-like TIM barrel IR188_RS03380 PF07702 UTRA domain IR188_RS03380 PF00392 Bacterial regulatory proteins, gntR family IR188_RS03390 PF00936 BMC domain IR188_RS03395 PF10662 Ethanolamine utilisation - propanediol utilisation IR188_RS03400 PF06249 Ethanolamine utilisation protein EutQ IR188_RS03405 PF01923 Cobalamin adenosyltransferase IR188_RS03410 PF01515 Phosphate acetyl/butaryl transferase IR188_RS03415 PF00936 BMC domain IR188_RS03420 PF03319 Ethanolamine utilisation protein EutN/carboxysome IR188_RS03425 PF00171 Aldehyde dehydrogenase family IR188_RS03435 PF00465 Iron-containing alcohol dehydrogenase IR188_RS03440 PF04346 Ethanolamine utilisation protein, EutH IR188_RS03445 PF06277 Ethanolamine utilisation protein EutA IR188_RS03450 PF06751 Ethanolamine ammonia lyase large subunit (EutB) IR188_RS03455 PF05985 Ethanolamine ammonia-lyase light chain (EutC) IR188_RS03460 PF00936 BMC domain IR188_RS03465 PF16365 Ethanolamine utilization protein EutK C-terminus IR188_RS03465 PF00936 BMC domain IR188_RS03470 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit IR188_RS03470 PF13237 4Fe-4S dicluster domain IR188_RS03470 PF13375 RnfC Barrel sandwich hybrid domain IR188_RS03470 PF10531 SLBB domain IR188_RS03480 PF12833 Helix-turn-helix domain IR188_RS03485 PF17763 Glutaminase/Asparaginase C-terminal domain IR188_RS03485 PF00710 Asparaginase, N-terminal IR188_RS03490 PF07715 TonB-dependent Receptor Plug Domain IR188_RS03490 PF00593 TonB dependent receptor IR188_RS03520 PF00860 Permease family IR188_RS03525 PF01979 Amidohydrolase family IR188_RS03530 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain IR188_RS03530 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase IR188_RS03530 PF01799 [2Fe-2S] binding domain IR188_RS03535 PF00941 FAD binding domain in molybdopterin dehydrogenase IR188_RS03540 PF01979 Amidohydrolase family IR188_RS03545 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster IR188_RS03545 PF07992 Pyridine nucleotide-disulphide oxidoreductase IR188_RS03550 PF12804 MobA-like NTP transferase domain IR188_RS03560 PF13478 XdhC Rossmann domain IR188_RS03560 PF02625 XdhC and CoxI family IR188_RS03565 PF01566 Natural resistance-associated macrophage protein IR188_RS03575 PF00924 Mechanosensitive ion channel IR188_RS03580 PF02909 Tetracyclin repressor-like, C-terminal domain IR188_RS03580 PF00440 Bacterial regulatory proteins, tetR family IR188_RS03585 PF08240 Alcohol dehydrogenase GroES-like domain IR188_RS03585 PF00107 Zinc-binding dehydrogenase IR188_RS03590 PF00756 Putative esterase IR188_RS03595 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family IR188_RS03600 PF07690 Major Facilitator Superfamily IR188_RS03610 PF00696 Amino acid kinase family IR188_RS03615 PF01979 Amidohydrolase family IR188_RS03620 PF01546 Peptidase family M20/M25/M40 IR188_RS03620 PF07687 Peptidase dimerisation domain IR188_RS03625 PF00291 Pyridoxal-phosphate dependent enzyme IR188_RS03630 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IR188_RS03630 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IR188_RS03635 PF02954 Bacterial regulatory protein, Fis family IR188_RS03635 PF13188 PAS domain IR188_RS03635 PF00158 Sigma-54 interaction domain IR188_RS03640 PF00881 Nitroreductase family IR188_RS03645 PF01638 HxlR-like helix-turn-helix IR188_RS03650 PF00111 2Fe-2S iron-sulfur cluster binding domain IR188_RS03650 PF01799 [2Fe-2S] binding domain IR188_RS03655 PF00941 FAD binding domain in molybdopterin dehydrogenase IR188_RS03655 PF03450 CO dehydrogenase flavoprotein C-terminal domain IR188_RS03660 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain IR188_RS03660 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase IR188_RS03675 PF00196 Bacterial regulatory proteins, luxR family IR188_RS03675 PF00072 Response regulator receiver domain IR188_RS03680 PF00356 Bacterial regulatory proteins, lacI family IR188_RS03680 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family IR188_RS03685 PF00892 EamA-like transporter family IR188_RS03690 PF02222 ATP-grasp domain IR188_RS03705 PF02554 Carbon starvation protein CstA IR188_RS03705 PF13722 5TM C-terminal transporter carbon starvation CstA IR188_RS03710 PF07683 Cobalamin synthesis protein cobW C-terminal domain IR188_RS03710 PF02492 CobW/HypB/UreG, nucleotide-binding domain IR188_RS03715 PF03313 Serine dehydratase alpha chain IR188_RS03720 PF01554 MatE IR188_RS03725 PF01118 Semialdehyde dehydrogenase, NAD binding domain IR188_RS03725 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain IR188_RS03735 PF01212 Beta-eliminating lyase IR188_RS03740 PF03222 Tryptophan/tyrosine permease family IR188_RS03745 PF09370 Phosphoenolpyruvate hydrolase-like IR188_RS03770 PF01979 Amidohydrolase family IR188_RS03775 PF08402 TOBE domain IR188_RS03775 PF00005 ABC transporter IR188_RS03780 PF00528 Binding-protein-dependent transport system inner membrane component IR188_RS03790 PF07690 Major Facilitator Superfamily IR188_RS03795 PF05231 MASE1 IR188_RS03795 PF07730 Histidine kinase IR188_RS03795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IR188_RS03800 PF00196 Bacterial regulatory proteins, luxR family IR188_RS03800 PF00072 Response regulator receiver domain IR188_RS03805 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) IR188_RS03810 PF07731 Multicopper oxidase IR188_RS03810 PF07732 Multicopper oxidase IR188_RS03810 PF00394 Multicopper oxidase IR188_RS03815 PF00156 Phosphoribosyl transferase domain IR188_RS03820 PF00484 Carbonic anhydrase IR188_RS03825 PF00005 ABC transporter IR188_RS03830 PF01061 ABC-2 type transporter IR188_RS03835 PF08548 Peptidase M10 serralysin C terminal IR188_RS03835 PF00413 Matrixin IR188_RS03835 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) IR188_RS03845 PF00005 ABC transporter IR188_RS03845 PF00664 ABC transporter transmembrane region IR188_RS03850 PF00529 HlyD membrane-fusion protein of T1SS IR188_RS03855 PF02321 Outer membrane efflux protein IR188_RS03860 PF02569 Pantoate-beta-alanine ligase IR188_RS03865 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) IR188_RS03870 PF01743 Poly A polymerase head domain IR188_RS03870 PF12626 Polymerase A arginine-rich C-terminus IR188_RS03870 PF12627 Probable RNA and SrmB- binding site of polymerase A IR188_RS03875 PF00749 tRNA synthetases class I (E and Q), catalytic domain IR188_RS03880 PF01258 Prokaryotic dksA/traR C4-type zinc finger IR188_RS03885 PF03749 Sugar fermentation stimulation protein RE domain IR188_RS03885 PF17746 SfsA N-terminal OB domain IR188_RS03890 PF00271 Helicase conserved C-terminal domain IR188_RS03890 PF08482 ATP-dependent helicase C-terminal IR188_RS03890 PF04408 Helicase associated domain (HA2) IR188_RS03890 PF00270 DEAD/DEAH box helicase IR188_RS03895 PF00905 Penicillin binding protein transpeptidase domain IR188_RS03895 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal IR188_RS03895 PF00912 Transglycosylase IR188_RS03895 PF14814 Bifunctional transglycosylase second domain IR188_RS03905 PF17841 BID domain of Bartonella effector protein (Bep) IR188_RS03905 PF02661 Fic/DOC family IR188_RS03910 PF01292 Prokaryotic cytochrome b561 IR188_RS03915 PF13247 4Fe-4S dicluster domain IR188_RS03915 PF09163 Formate dehydrogenase N, transmembrane IR188_RS03915 PF12800 4Fe-4S binding domain IR188_RS03925 PF12833 Helix-turn-helix domain IR188_RS03930 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IR188_RS03930 PF00384 Molybdopterin oxidoreductase IR188_RS03930 PF01568 Molydopterin dinucleotide binding domain IR188_RS03935 PF13247 4Fe-4S dicluster domain IR188_RS03935 PF12800 4Fe-4S binding domain IR188_RS03945 PF02613 Nitrate reductase delta subunit IR188_RS03955 PF00202 Aminotransferase class-III IR188_RS03960 PF01521 Iron-sulphur cluster biosynthesis IR188_RS03970 PF02613 Nitrate reductase delta subunit IR188_RS03980 PF12800 4Fe-4S binding domain IR188_RS03980 PF13247 4Fe-4S dicluster domain IR188_RS03995 PF01497 Periplasmic binding protein IR188_RS04000 PF01048 Phosphorylase superfamily IR188_RS04005 PF13286 Phosphohydrolase-associated domain IR188_RS04005 PF01966 HD domain IR188_RS04015 PF05958 tRNA (Uracil-5-)-methyltransferase IR188_RS04015 PF01938 TRAM domain IR188_RS04020 PF02824 TGS domain IR188_RS04020 PF04607 Region found in RelA / SpoT proteins IR188_RS04020 PF13291 ACT domain IR188_RS04025 PF03819 MazG nucleotide pyrophosphohydrolase domain IR188_RS04030 PF06418 CTP synthase N-terminus IR188_RS04030 PF00117 Glutamine amidotransferase class-I IR188_RS04035 PF00113 Enolase, C-terminal TIM barrel domain IR188_RS04035 PF03952 Enolase, N-terminal domain IR188_RS04040 PF00939 Sodium:sulfate symporter transmembrane region IR188_RS04045 PF01464 Transglycosylase SLT domain IR188_RS04045 PF01476 LysM domain IR188_RS04050 PF00753 Metallo-beta-lactamase superfamily IR188_RS04050 PF16123 Hydroxyacylglutathione hydrolase C-terminus IR188_RS04055 PF08241 Methyltransferase domain IR188_RS04060 PF00075 RNase H IR188_RS04065 PF00929 Exonuclease IR188_RS04070 PF03692 Putative zinc- or iron-chelating domain IR188_RS04080 PF00860 Permease family IR188_RS04085 PF02779 Transketolase, pyrimidine binding domain IR188_RS04085 PF02780 Transketolase, C-terminal domain IR188_RS04085 PF00456 Transketolase, thiamine diphosphate binding domain IR188_RS04090 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IR188_RS04090 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IR188_RS04095 PF00162 Phosphoglycerate kinase IR188_RS04100 PF01116 Fructose-bisphosphate aldolase class-II IR188_RS04115 PF15608 PELOTA RNA binding domain IR188_RS04115 PF11202 Phosphoribosyl transferase (PRTase) IR188_RS04135 PF02342 TerD domain IR188_RS04140 PF02342 TerD domain IR188_RS04145 PF05099 Tellurite resistance protein TerB IR188_RS04150 PF03741 Integral membrane protein TerC family IR188_RS04155 PF02342 TerD domain IR188_RS04160 PF02342 TerD domain IR188_RS04170 PF00854 POT family IR188_RS04175 PF01613 Flavin reductase like domain IR188_RS04180 PF00171 Aldehyde dehydrogenase family IR188_RS04185 PF01047 MarR family IR188_RS04190 PF02028 BCCT, betaine/carnitine/choline family transporter IR188_RS04205 PF08220 DeoR-like helix-turn-helix domain IR188_RS04205 PF00455 DeoR C terminal sensor domain IR188_RS04215 PF07836 DmpG-like communication domain IR188_RS04215 PF00682 HMGL-like IR188_RS04225 PF01070 FMN-dependent dehydrogenase IR188_RS04230 PF02652 L-lactate permease IR188_RS04235 PF03466 LysR substrate binding domain IR188_RS04235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IR188_RS04240 PF12706 Beta-lactamase superfamily domain IR188_RS04260 PF01048 Phosphorylase superfamily IR188_RS04265 PF03825 Nucleoside H+ symporter IR188_RS04270 PF03212 Pertactin IR188_RS04270 PF16168 Adhesin of bacterial autotransporter system, probable stalk IR188_RS04270 PF13018 Extended Signal Peptide of Type V secretion system IR188_RS04270 PF03797 Autotransporter beta-domain IR188_RS04280 PF13416 Bacterial extracellular solute-binding protein IR188_RS04285 PF00528 Binding-protein-dependent transport system inner membrane component IR188_RS04290 PF08402 TOBE domain IR188_RS04290 PF00005 ABC transporter IR188_RS04300 PF08242 Methyltransferase domain IR188_RS04305 PF00701 Dihydrodipicolinate synthetase family IR188_RS04310 PF01418 Helix-turn-helix domain, rpiR family IR188_RS04310 PF01380 SIS domain IR188_RS04315 PF04074 YhcH/YjgK/YiaL IR188_RS04320 PF00474 Sodium:solute symporter family IR188_RS04325 PF00480 ROK family IR188_RS04330 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase IR188_RS04335 PF06178 Oligogalacturonate-specific porin protein (KdgM) IR188_RS04340 PF01344 Kelch motif IR188_RS04355 PF01648 4'-phosphopantetheinyl transferase superfamily IR188_RS04360 PF00005 ABC transporter IR188_RS04360 PF00664 ABC transporter transmembrane region IR188_RS04365 PF08021 Siderophore-interacting FAD-binding domain IR188_RS04365 PF00005 ABC transporter IR188_RS04365 PF04954 Siderophore-interacting protein IR188_RS04365 PF00664 ABC transporter transmembrane region IR188_RS04370 PF00975 Thioesterase domain IR188_RS04380 PF00668 Condensation domain IR188_RS04380 PF00698 Acyl transferase domain IR188_RS04380 PF00109 Beta-ketoacyl synthase, N-terminal domain IR188_RS04380 PF02801 Beta-ketoacyl synthase, C-terminal domain IR188_RS04380 PF00550 Phosphopantetheine attachment site IR188_RS04380 PF16197 Ketoacyl-synthetase C-terminal extension IR188_RS04385 PF00501 AMP-binding enzyme IR188_RS04385 PF08242 Methyltransferase domain IR188_RS04385 PF00668 Condensation domain IR188_RS04385 PF00550 Phosphopantetheine attachment site IR188_RS04395 PF07690 Major Facilitator Superfamily IR188_RS04400 PF07715 TonB-dependent Receptor Plug Domain IR188_RS04400 PF00593 TonB dependent receptor IR188_RS04405 PF00589 Phage integrase family IR188_RS04405 PF13356 Arm DNA-binding domain IR188_RS04415 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain IR188_RS04415 PF01464 Transglycosylase SLT domain IR188_RS04420 PF04362 Bacterial Fe(2+) trafficking IR188_RS04425 PF00633 Helix-hairpin-helix motif IR188_RS04425 PF10576 Iron-sulfur binding domain of endonuclease III IR188_RS04425 PF00730 HhH-GPD superfamily base excision DNA repair protein IR188_RS04425 PF14815 NUDIX domain IR188_RS04430 PF02390 Putative methyltransferase IR188_RS04435 PF04320 Protein with unknown function (DUF469) IR188_RS04440 PF04960 Glutaminase IR188_RS04445 PF11101 Protein of unknown function (DUF2884) IR188_RS04450 PF01497 Periplasmic binding protein IR188_RS04455 PF04055 Radical SAM superfamily IR188_RS04455 PF06969 HemN C-terminal domain IR188_RS04460 PF01725 Ham1 family IR188_RS04465 PF02325 YGGT family IR188_RS04470 PF01168 Alanine racemase, N-terminal domain IR188_RS04475 PF00437 Type II/IV secretion system protein IR188_RS04480 PF03652 Holliday junction resolvase IR188_RS04485 PF02622 Uncharacterized ACR, COG1678 IR188_RS04490 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain IR188_RS04490 PF02951 Prokaryotic glutathione synthetase, N-terminal domain IR188_RS04495 PF04452 RNA methyltransferase IR188_RS04500 PF01478 Type IV leader peptidase family IR188_RS04500 PF06750 Bacterial Peptidase A24 N-terminal domain IR188_RS04515 PF03466 LysR substrate binding domain IR188_RS04515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IR188_RS04520 PF03466 LysR substrate binding domain IR188_RS04520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IR188_RS04525 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain IR188_RS04525 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain IR188_RS04530 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IR188_RS04540 PF09317 Domain of unknown function (DUF1974) IR188_RS04540 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IR188_RS04540 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IR188_RS04545 PF13580 SIS domain IR188_RS04550 PF13230 Glutamine amidotransferases class-II IR188_RS04555 PF03734 L,D-transpeptidase catalytic domain IR188_RS04560 PF11973 NQRA C-terminal domain IR188_RS04560 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) IR188_RS04565 PF03116 NQR2, RnfD, RnfE family IR188_RS04570 PF04205 FMN-binding domain IR188_RS04575 PF02508 Rnf-Nqr subunit, membrane protein IR188_RS04580 PF02508 Rnf-Nqr subunit, membrane protein IR188_RS04585 PF00175 Oxidoreductase NAD-binding domain IR188_RS04585 PF00111 2Fe-2S iron-sulfur cluster binding domain IR188_RS04585 PF00970 Oxidoreductase FAD-binding domain IR188_RS04590 PF02424 ApbE family IR188_RS04595 PF04400 (Na+)-NQR maturation NqrM IR188_RS04605 PF03009 Glycerophosphoryl diester phosphodiesterase family IR188_RS04610 PF11798 IMS family HHH motif IR188_RS04610 PF00817 impB/mucB/samB family IR188_RS04610 PF11799 impB/mucB/samB family C-terminal domain IR188_RS04615 PF01546 Peptidase family M20/M25/M40 IR188_RS04615 PF07687 Peptidase dimerisation domain IR188_RS04620 PF00156 Phosphoribosyl transferase domain IR188_RS04625 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) IR188_RS04630 PF07417 Sigma factor-binding transcriptional regulator Crl IR188_RS04635 PF00696 Amino acid kinase family IR188_RS04635 PF01472 PUA domain IR188_RS04640 PF00171 Aldehyde dehydrogenase family IR188_RS04645 PF01202 Shikimate kinase IR188_RS04650 PF13193 AMP-binding enzyme C-terminal domain IR188_RS04650 PF01553 Acyltransferase IR188_RS04650 PF00501 AMP-binding enzyme IR188_RS04655 PF07690 Major Facilitator Superfamily IR188_RS04660 PF02464 Competence-damaged protein IR188_RS04665 PF00154 recA bacterial DNA recombination protein IR188_RS04670 PF01411 tRNA synthetases class II (A) IR188_RS04670 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IR188_RS04670 PF02272 DHHA1 domain IR188_RS04675 PF02599 Global regulator protein family IR188_RS04705 PF04262 Glutamate-cysteine ligase IR188_RS04710 PF02664 S-Ribosylhomocysteinase (LuxS) IR188_RS04715 PF03471 Transporter associated domain IR188_RS04715 PF00571 CBS domain IR188_RS04715 PF01595 Cyclin M transmembrane N-terminal domain IR188_RS04720 PF01578 Cytochrome C assembly protein IR188_RS04725 PF02881 SRP54-type protein, helical bundle domain IR188_RS04725 PF02978 Signal peptide binding domain IR188_RS04725 PF00448 SRP54-type protein, GTPase domain IR188_RS04730 PF00886 Ribosomal protein S16 IR188_RS04735 PF01782 RimM N-terminal domain IR188_RS04735 PF05239 PRC-barrel domain IR188_RS04740 PF01746 tRNA (Guanine-1)-methyltransferase IR188_RS04745 PF01245 Ribosomal protein L19 IR188_RS04750 PF00793 DAHP synthetase I family IR188_RS04755 PF02153 Prephenate dehydrogenase IR188_RS04755 PF01817 Chorismate mutase type II IR188_RS04765 PF00152 tRNA synthetases class II (D, K and N) IR188_RS04770 PF01817 Chorismate mutase type II IR188_RS04770 PF00800 Prephenate dehydratase IR188_RS04775 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein IR188_RS04780 PF13525 Outer membrane lipoprotein IR188_RS04785 PF00849 RNA pseudouridylate synthase IR188_RS04785 PF01479 S4 domain IR188_RS04790 PF02578 Multi-copper polyphenol oxidoreductase laccase IR188_RS04795 PF00004 ATPase family associated with various cellular activities (AAA) IR188_RS04795 PF07724 AAA domain (Cdc48 subfamily) IR188_RS04795 PF10431 C-terminal, D2-small domain, of ClpB protein IR188_RS04795 PF17871 AAA lid domain IR188_RS04795 PF02861 Clp amino terminal domain, pathogenicity island component IR188_RS04825 PF03212 Pertactin IR188_RS04825 PF13018 Extended Signal Peptide of Type V secretion system IR188_RS04825 PF03797 Autotransporter beta-domain IR188_RS04825 PF16168 Adhesin of bacterial autotransporter system, probable stalk IR188_RS04835 PF10043 Predicted periplasmic lipoprotein (DUF2279) IR188_RS04840 PF13091 PLD-like domain IR188_RS04845 PF00583 Acetyltransferase (GNAT) family IR188_RS04845 PF13607 Succinyl-CoA ligase like flavodoxin domain IR188_RS04845 PF13380 CoA binding domain IR188_RS04850 PF03942 DTW domain IR188_RS04855 PF08032 RNA 2'-O ribose methyltransferase substrate binding IR188_RS04855 PF00588 SpoU rRNA Methylase family IR188_RS04860 PF07690 Major Facilitator Superfamily IR188_RS04865 PF00529 HlyD membrane-fusion protein of T1SS IR188_RS04865 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IR188_RS04870 PF01047 MarR family IR188_RS04875 PF07690 Major Facilitator Superfamily IR188_RS04880 PF04069 Substrate binding domain of ABC-type glycine betaine transport system IR188_RS04885 PF00528 Binding-protein-dependent transport system inner membrane component IR188_RS04890 PF00571 CBS domain IR188_RS04890 PF00005 ABC transporter IR188_RS04895 PF00268 Ribonucleotide reductase, small chain IR188_RS04900 PF08343 Ribonucleotide reductase N-terminal IR188_RS04900 PF00317 Ribonucleotide reductase, all-alpha domain IR188_RS04900 PF02867 Ribonucleotide reductase, barrel domain IR188_RS04905 PF07972 NrdI Flavodoxin like IR188_RS04910 PF00462 Glutaredoxin IR188_RS04920 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain IR188_RS04920 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain IR188_RS04925 PF00313 'Cold-shock' DNA-binding domain IR188_RS04930 PF00892 EamA-like transporter family IR188_RS04935 PF04055 Radical SAM superfamily IR188_RS04935 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family IR188_RS04940 PF03099 Biotin/lipoate A/B protein ligase family IR188_RS04945 PF04359 Protein of unknown function (DUF493) IR188_RS04950 PF00768 D-alanyl-D-alanine carboxypeptidase IR188_RS04950 PF07943 Penicillin-binding protein 5, C-terminal domain IR188_RS04955 PF03330 Lytic transglycolase IR188_RS04955 PF05036 Sporulation related domain IR188_RS04960 PF01098 Cell cycle protein IR188_RS04965 PF03717 Penicillin-binding Protein dimerisation domain IR188_RS04965 PF00905 Penicillin binding protein transpeptidase domain IR188_RS04970 PF02590 Predicted SPOUT methyltransferase IR188_RS04985 PF01638 HxlR-like helix-turn-helix IR188_RS04990 PF00106 short chain dehydrogenase IR188_RS04995 PF01467 Cytidylyltransferase-like IR188_RS05000 PF14840 Processivity clamp loader gamma complex DNA pol III C-term IR188_RS05000 PF06144 DNA polymerase III, delta subunit IR188_RS05005 PF04390 Lipopolysaccharide-assembly IR188_RS05010 PF08264 Anticodon-binding domain of tRNA IR188_RS05010 PF13603 Leucyl-tRNA synthetase, Domain 2 IR188_RS05010 PF00133 tRNA synthetases class I (I, L, M and V) IR188_RS05015 PF00005 ABC transporter IR188_RS05020 PF00528 Binding-protein-dependent transport system inner membrane component IR188_RS05025 PF00528 Binding-protein-dependent transport system inner membrane component IR188_RS05030 PF00497 Bacterial extracellular solute-binding proteins, family 3 IR188_RS05040 PF02683 Cytochrome C biogenesis protein transmembrane region IR188_RS05040 PF11412 Disulphide bond corrector protein DsbC IR188_RS05040 PF13098 Thioredoxin-like domain IR188_RS05050 PF00578 AhpC/TSA family IR188_RS05055 PF00795 Carbon-nitrogen hydrolase IR188_RS05060 PF03471 Transporter associated domain IR188_RS05060 PF00571 CBS domain IR188_RS05065 PF02130 Uncharacterized protein family UPF0054 IR188_RS05070 PF02562 PhoH-like protein IR188_RS05075 PF04055 Radical SAM superfamily IR188_RS05075 PF01938 TRAM domain IR188_RS05075 PF00919 Uncharacterized protein family UPF0004 IR188_RS05080 PF01494 FAD binding domain IR188_RS05120 PF01047 MarR family IR188_RS05120 PF00480 ROK family IR188_RS05125 PF01979 Amidohydrolase family IR188_RS05130 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase IR188_RS05135 PF00367 phosphotransferase system, EIIB IR188_RS05135 PF02378 Phosphotransferase system, EIIC IR188_RS05135 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 IR188_RS05140 PF00749 tRNA synthetases class I (E and Q), catalytic domain IR188_RS05140 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain IR188_RS05145 PF01475 Ferric uptake regulator family IR188_RS05150 PF00258 Flavodoxin IR188_RS05155 PF01402 Ribbon-helix-helix protein, copG family IR188_RS05170 PF12697 Alpha/beta hydrolase family IR188_RS05175 PF17206 SeqA protein N-terminal domain IR188_RS05175 PF03925 SeqA protein C-terminal domain IR188_RS05180 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IR188_RS05180 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IR188_RS05180 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IR188_RS05180 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IR188_RS05190 PF10725 Protein of unknown function (DUF2517) IR188_RS05195 PF01784 NIF3 (NGG1p interacting factor 3) IR188_RS05200 PF07690 Major Facilitator Superfamily IR188_RS05210 PF00285 Citrate synthase, C-terminal domain IR188_RS05215 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit IR188_RS05220 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit IR188_RS05225 PF00890 FAD binding domain IR188_RS05225 PF02910 Fumarate reductase flavoprotein C-term IR188_RS05230 PF13085 2Fe-2S iron-sulfur cluster binding domain IR188_RS05235 PF00676 Dehydrogenase E1 component IR188_RS05235 PF16078 2-oxoglutarate dehydrogenase N-terminus IR188_RS05235 PF16870 2-oxoglutarate dehydrogenase C-terminal IR188_RS05235 PF02779 Transketolase, pyrimidine binding domain IR188_RS05240 PF00364 Biotin-requiring enzyme IR188_RS05240 PF02817 e3 binding domain IR188_RS05240 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IR188_RS05245 PF08442 ATP-grasp domain IR188_RS05245 PF00549 CoA-ligase IR188_RS05250 PF02629 CoA binding domain IR188_RS05250 PF00549 CoA-ligase IR188_RS05255 PF01654 Cytochrome bd terminal oxidase subunit I IR188_RS05260 PF02322 Cytochrome bd terminal oxidase subunit II IR188_RS05265 PF08173 Membrane bound YbgT-like protein IR188_RS05270 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) IR188_RS05275 PF03466 LysR substrate binding domain IR188_RS05275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IR188_RS05280 PF07690 Major Facilitator Superfamily IR188_RS05290 PF03061 Thioesterase superfamily IR188_RS05295 PF01618 MotA/TolQ/ExbB proton channel family IR188_RS05300 PF02472 Biopolymer transport protein ExbD/TolR IR188_RS05305 PF06519 TolA C-terminal IR188_RS05305 PF06519 TolA C-terminal IR188_RS05310 PF07676 WD40-like Beta Propeller Repeat IR188_RS05310 PF04052 TolB amino-terminal domain IR188_RS05315 PF00691 OmpA family IR188_RS05320 PF16331 TolA binding protein trimerisation IR188_RS05320 PF13174 Tetratricopeptide repeat IR188_RS05345 PF04973 Nicotinamide mononucleotide transporter IR188_RS05350 PF05661 Protein of unknown function (DUF808) IR188_RS05355 PF00793 DAHP synthetase I family IR188_RS05360 PF00300 Histidine phosphatase superfamily (branch 1) IR188_RS05370 PF00005 ABC transporter IR188_RS05375 PF00149 Calcineurin-like phosphoesterase IR188_RS05375 PF02872 5'-nucleotidase, C-terminal domain IR188_RS05380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IR188_RS05380 PF03459 TOBE domain IR188_RS05390 PF10766 Multidrug efflux pump-associated protein AcrZ IR188_RS05400 PF00528 Binding-protein-dependent transport system inner membrane component IR188_RS05405 PF03459 TOBE domain IR188_RS05405 PF00005 ABC transporter IR188_RS05420 PF10282 Lactonase, 7-bladed beta-propeller IR188_RS05425 PF00202 Aminotransferase class-III IR188_RS05430 PF04055 Radical SAM superfamily IR188_RS05430 PF06968 Biotin and Thiamin Synthesis associated domain IR188_RS05435 PF00155 Aminotransferase class I and II IR188_RS05440 PF08241 Methyltransferase domain IR188_RS05455 PF12344 Ultra-violet resistance protein B IR188_RS05455 PF17757 UvrB interaction domain IR188_RS05455 PF04851 Type III restriction enzyme, res subunit IR188_RS05455 PF02151 UvrB/uvrC motif IR188_RS05455 PF00271 Helicase conserved C-terminal domain IR188_RS05460 PF01933 Uncharacterised protein family UPF0052 IR188_RS05470 PF04055 Radical SAM superfamily IR188_RS05470 PF06463 Molybdenum Cofactor Synthesis C IR188_RS05475 PF01967 MoaC family IR188_RS05480 PF02597 ThiS family IR188_RS05485 PF02391 MoaE protein IR188_RS05490 PF01027 Inhibitor of apoptosis-promoting Bax1 IR188_RS05505 PF00005 ABC transporter IR188_RS05510 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IR188_RS05515 PF09209 Tetracyclin repressor-like, C-terminal domain IR188_RS05515 PF00440 Bacterial regulatory proteins, tetR family IR188_RS05520 PF00271 Helicase conserved C-terminal domain IR188_RS05520 PF00270 DEAD/DEAH box helicase IR188_RS05525 PF01207 Dihydrouridine synthase (Dus) IR188_RS05530 PF04226 Transglycosylase associated protein IR188_RS05535 PF00581 Rhodanese-like domain IR188_RS05545 PF06733 DEAD_2 IR188_RS05545 PF13307 Helicase C-terminal domain IR188_RS05550 PF02753 Pili assembly chaperone PapD, C-terminal domain IR188_RS05550 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain IR188_RS05555 PF00210 Ferritin-like domain IR188_RS05560 PF00892 EamA-like transporter family IR188_RS05565 PF03641 Possible lysine decarboxylase IR188_RS05575 PF07969 Amidohydrolase family IR188_RS05580 PF13520 Amino acid permease IR188_RS05585 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin IR188_RS05590 PF07969 Amidohydrolase family IR188_RS05595 PF00899 ThiF family IR188_RS05600 PF03454 MoeA C-terminal region (domain IV) IR188_RS05600 PF03453 MoeA N-terminal region (domain I and II) IR188_RS05600 PF00994 Probable molybdopterin binding domain IR188_RS05605 PF06779 Uncharacterised MFS-type transporter YbfB IR188_RS05615 PF01227 GTP cyclohydrolase I IR188_RS05620 PF04235 Protein of unknown function (DUF418) IR188_RS05625 PF02698 DUF218 domain IR188_RS05630 PF03949 Malic enzyme, NAD binding domain IR188_RS05630 PF00390 Malic enzyme, N-terminal domain IR188_RS05635 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region IR188_RS05635 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IR188_RS05640 PF04172 LrgB-like family IR188_RS05645 PF03788 LrgA family IR188_RS05650 PF01588 Putative tRNA binding domain IR188_RS05650 PF09334 tRNA synthetases class I (M) IR188_RS05655 PF10609 NUBPL iron-transfer P-loop NTPase IR188_RS05660 PF00485 Phosphoribulokinase / Uridine kinase family IR188_RS05665 PF00692 dUTPase IR188_RS05670 PF05170 AsmA family IR188_RS05675 PF03606 C4-dicarboxylate anaerobic carrier IR188_RS05680 PF00677 Lumazine binding domain IR188_RS05690 PF01694 Rhomboid family IR188_RS05695 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain IR188_RS05695 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IR188_RS05700 PF03741 Integral membrane protein TerC family IR188_RS05700 PF00571 CBS domain IR188_RS05700 PF03471 Transporter associated domain IR188_RS05710 PF00999 Sodium/hydrogen exchanger family IR188_RS05720 PF04073 Aminoacyl-tRNA editing domain IR188_RS05725 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase IR188_RS05725 PF01502 Phosphoribosyl-AMP cyclohydrolase IR188_RS05730 PF00977 Histidine biosynthesis protein IR188_RS05735 PF00977 Histidine biosynthesis protein IR188_RS05740 PF00117 Glutamine amidotransferase class-I IR188_RS05745 PF00475 Imidazoleglycerol-phosphate dehydratase IR188_RS05745 PF08645 Polynucleotide kinase 3 phosphatase IR188_RS05750 PF00815 Histidinol dehydrogenase IR188_RS05750 PF00155 Aminotransferase class I and II IR188_RS05755 PF00815 Histidinol dehydrogenase IR188_RS05760 PF01634 ATP phosphoribosyltransferase IR188_RS05760 PF08029 HisG, C-terminal domain IR188_RS05770 PF01370 NAD dependent epimerase/dehydratase family IR188_RS05775 PF00043 Glutathione S-transferase, C-terminal domain IR188_RS05775 PF13417 Glutathione S-transferase, N-terminal domain IR188_RS05780 PF07943 Penicillin-binding protein 5, C-terminal domain IR188_RS05780 PF00768 D-alanyl-D-alanine carboxypeptidase IR188_RS05790 PF03313 Serine dehydratase alpha chain IR188_RS05790 PF03315 Serine dehydratase beta chain IR188_RS05805 PF01569 PAP2 superfamily IR188_RS05810 PF00462 Glutaredoxin IR188_RS05820 PF10722 Putative bacterial sensory transduction regulator IR188_RS05825 PF05958 tRNA (Uracil-5-)-methyltransferase IR188_RS05830 PF00528 Binding-protein-dependent transport system inner membrane component IR188_RS05835 PF00528 Binding-protein-dependent transport system inner membrane component IR188_RS05840 PF00497 Bacterial extracellular solute-binding proteins, family 3 IR188_RS05845 PF00005 ABC transporter IR188_RS05850 PF11066 Protein of unknown function (DUF2867) IR188_RS05850 PF13460 NAD(P)H-binding IR188_RS05855 PF03956 Lysine exporter LysO IR188_RS05860 PF11398 Protein of unknown function (DUF2813) IR188_RS05865 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IR188_RS05870 PF02687 FtsX-like permease family IR188_RS05870 PF00005 ABC transporter IR188_RS05870 PF12704 MacB-like periplasmic core domain IR188_RS05875 PF00313 'Cold-shock' DNA-binding domain IR188_RS05880 PF02617 ATP-dependent Clp protease adaptor protein ClpS IR188_RS05885 PF10431 C-terminal, D2-small domain, of ClpB protein IR188_RS05885 PF17871 AAA lid domain IR188_RS05885 PF00004 ATPase family associated with various cellular activities (AAA) IR188_RS05885 PF07724 AAA domain (Cdc48 subfamily) IR188_RS05885 PF02861 Clp amino terminal domain, pathogenicity island component IR188_RS05890 PF01176 Translation initiation factor 1A / IF-1 IR188_RS05895 PF03588 Leucyl/phenylalanyl-tRNA protein transferase IR188_RS05900 PF00005 ABC transporter IR188_RS05900 PF00664 ABC transporter transmembrane region IR188_RS05905 PF00664 ABC transporter transmembrane region IR188_RS05905 PF00005 ABC transporter IR188_RS05910 PF07992 Pyridine nucleotide-disulphide oxidoreductase IR188_RS05915 PF01037 Lrp/AsnC ligand binding domain IR188_RS05920 PF09397 Ftsk gamma domain IR188_RS05920 PF01580 FtsK/SpoIIIE family IR188_RS05920 PF13491 4TM region of DNA translocase FtsK/SpoIIIE IR188_RS05920 PF17854 FtsK alpha domain IR188_RS05925 PF03548 Outer membrane lipoprotein carrier protein LolA IR188_RS05930 PF16193 AAA C-terminal domain IR188_RS05930 PF00004 ATPase family associated with various cellular activities (AAA) IR188_RS05930 PF12002 MgsA AAA+ ATPase C terminal IR188_RS05935 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IR188_RS05935 PF02403 Seryl-tRNA synthetase N-terminal domain IR188_RS05945 PF04055 Radical SAM superfamily IR188_RS05950 PF01228 Glycine radical IR188_RS05950 PF02901 Pyruvate formate lyase-like IR188_RS05955 PF01226 Formate/nitrite transporter IR188_RS05960 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding IR188_RS05960 PF18381 YcaO cyclodehydratase C-terminal domain IR188_RS05965 PF00266 Aminotransferase class-V IR188_RS05970 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IR188_RS05975 PF02224 Cytidylate kinase IR188_RS05980 PF00575 S1 RNA binding domain IR188_RS05985 PF00216 Bacterial DNA-binding protein IR188_RS05990 PF00753 Metallo-beta-lactamase superfamily IR188_RS05990 PF03772 Competence protein IR188_RS05995 PF00664 ABC transporter transmembrane region IR188_RS05995 PF00005 ABC transporter IR188_RS06000 PF02606 Tetraacyldisaccharide-1-P 4'-kinase IR188_RS06005 PF00313 'Cold-shock' DNA-binding domain IR188_RS06010 PF03966 Trm112p-like protein IR188_RS06015 PF02348 Cytidylyltransferase IR188_RS06020 PF02698 DUF218 domain IR188_RS06025 PF13847 Methyltransferase domain IR188_RS06030 PF17192 MukF middle domain IR188_RS06030 PF17193 MukF C-terminal domain IR188_RS06030 PF03882 MukF winged-helix domain IR188_RS06035 PF04288 MukE-like family IR188_RS06040 PF16330 MukB hinge domain IR188_RS06040 PF04310 MukB N-terminal IR188_RS06045 PF00857 Isochorismatase family IR188_RS06050 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) IR188_RS06055 PF03734 L,D-transpeptidase catalytic domain IR188_RS06055 PF01471 Putative peptidoglycan binding domain IR188_RS06060 PF05951 Bacterial protein of unknown function (DUF882) IR188_RS06065 PF00753 Metallo-beta-lactamase superfamily IR188_RS06070 PF00155 Aminotransferase class I and II IR188_RS06080 PF01336 OB-fold nucleic acid binding domain IR188_RS06080 PF00152 tRNA synthetases class II (D, K and N) IR188_RS06085 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family IR188_RS06085 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain IR188_RS06090 PF11940 Domain of unknown function (DUF3458) Ig-like fold IR188_RS06090 PF17432 Domain of unknown function (DUF3458_C) ARM repeats IR188_RS06090 PF01433 Peptidase family M1 domain IR188_RS06095 PF04536 TPM domain IR188_RS06100 PF01180 Dihydroorotate dehydrogenase IR188_RS06105 PF07126 Cell-division protein ZapC IR188_RS06110 PF00111 2Fe-2S iron-sulfur cluster binding domain IR188_RS06110 PF03476 MOSC N-terminal beta barrel domain IR188_RS06110 PF03473 MOSC domain IR188_RS06115 PF02926 THUMP domain IR188_RS06115 PF10672 S-adenosylmethionine-dependent methyltransferase IR188_RS06115 PF01170 Putative RNA methylase family UPF0020 IR188_RS06120 PF00005 ABC transporter IR188_RS06120 PF12848 ABC transporter IR188_RS06120 PF16326 ABC transporter C-terminal domain IR188_RS06125 PF04403 Paraquat-inducible protein A IR188_RS06130 PF02470 MlaD protein IR188_RS06140 PF04957 Ribosome modulation factor IR188_RS06145 PF07977 FabA-like domain IR188_RS06150 PF13654 AAA domain IR188_RS06150 PF05362 Lon protease (S16) C-terminal proteolytic domain IR188_RS06155 PF17414 MatP C-terminal ribbon-helix-helix domain IR188_RS06155 PF06303 MatP N-terminal domain IR188_RS06160 PF01389 OmpA-like transmembrane domain IR188_RS06160 PF00691 OmpA family IR188_RS06165 PF03846 Cell division inhibitor SulA IR188_RS06175 PF12805 FUSC-like inner membrane protein yccS IR188_RS06180 PF13361 UvrD-like helicase C-terminal domain IR188_RS06180 PF00580 UvrD/REP helicase N-terminal domain IR188_RS06180 PF12462 DNA helicase IV / RNA helicase N terminal IR188_RS06185 PF02142 MGS-like domain IR188_RS06190 PF13380 CoA binding domain IR188_RS06195 PF08755 Hemimethylated DNA-binding protein YccV like IR188_RS06200 PF00708 Acylphosphatase IR188_RS06205 PF04358 DsrC like protein IR188_RS06220 PF01568 Molydopterin dinucleotide binding domain IR188_RS06220 PF00384 Molybdopterin oxidoreductase IR188_RS06220 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IR188_RS06225 PF04143 Sulphur transport IR188_RS06230 PF01206 Sulfurtransferase TusA IR188_RS06240 PF04474 Protein of unknown function (DUF554) IR188_RS06250 PF14542 GCN5-related N-acetyl-transferase IR188_RS06260 PF09313 Domain of unknown function (DUF1971) IR188_RS06265 PF00419 Fimbrial protein IR188_RS06270 PF00419 Fimbrial protein IR188_RS06275 PF00577 Outer membrane usher protein IR188_RS06275 PF13953 PapC C-terminal domain IR188_RS06275 PF13954 PapC N-terminal domain IR188_RS06280 PF02753 Pili assembly chaperone PapD, C-terminal domain IR188_RS06280 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain IR188_RS06285 PF00419 Fimbrial protein IR188_RS06295 PF06445 GyrI-like small molecule binding domain IR188_RS06295 PF12833 Helix-turn-helix domain IR188_RS06300 PF02203 Tar ligand binding domain homologue IR188_RS06300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IR188_RS06300 PF00672 HAMP domain IR188_RS06310 PF00106 short chain dehydrogenase IR188_RS06320 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain IR188_RS06320 PF01276 Orn/Lys/Arg decarboxylase, major domain IR188_RS06320 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain IR188_RS06330 PF00795 Carbon-nitrogen hydrolase IR188_RS06335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IR188_RS06335 PF03466 LysR substrate binding domain IR188_RS06340 PF03466 LysR substrate binding domain IR188_RS06340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IR188_RS06345 PF00892 EamA-like transporter family IR188_RS06370 PF02627 Carboxymuconolactone decarboxylase family IR188_RS06380 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IR188_RS06385 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component IR188_RS06390 PF01869 BadF/BadG/BcrA/BcrD ATPase family IR188_RS06400 PF10371 Domain of unknown function IR188_RS06400 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II IR188_RS06400 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg IR188_RS06400 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IR188_RS06400 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase IR188_RS06415 PF04463 Protein of unknown function (DUF523) IR188_RS06420 PF02811 PHP domain IR188_RS06430 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin IR188_RS06450 PF00583 Acetyltransferase (GNAT) family IR188_RS06460 PF03658 RnfH family Ubiquitin IR188_RS06465 PF03364 Polyketide cyclase / dehydrase and lipid transport IR188_RS06470 PF01668 SmpB protein IR188_RS06495 PF01555 DNA methylase IR188_RS06505 PF01614 Bacterial transcriptional regulator IR188_RS06505 PF09339 IclR helix-turn-helix domain IR188_RS06510 PF00701 Dihydrodipicolinate synthetase family IR188_RS06515 PF07690 Major Facilitator Superfamily IR188_RS06520 PF08666 SAF domain IR188_RS06520 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus IR188_RS06525 PF08946 Osmosensory transporter coiled coil IR188_RS06525 PF00083 Sugar (and other) transporter IR188_RS06530 PF04355 SmpA / OmlA family IR188_RS06535 PF02463 RecF/RecN/SMC N terminal domain IR188_RS06540 PF01513 ATP-NAD kinase IR188_RS06545 PF01025 GrpE IR188_RS06550 PF03167 Uracil DNA glycosylase superfamily IR188_RS06555 PF01228 Glycine radical IR188_RS06565 PF00270 DEAD/DEAH box helicase IR188_RS06565 PF00271 Helicase conserved C-terminal domain IR188_RS06570 PF05175 Methyltransferase small domain IR188_RS06575 PF04542 Sigma-70 region 2 IR188_RS06575 PF08281 Sigma-70, region 4 IR188_RS06580 PF03873 Anti sigma-E protein RseA, C-terminal domain IR188_RS06580 PF03872 Anti sigma-E protein RseA, N-terminal domain IR188_RS06585 PF17188 MucB/RseB C-terminal domain IR188_RS06585 PF03888 MucB/RseB N-terminal domain IR188_RS06600 PF18413 Neuraminidase-like domain IR188_RS06600 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain IR188_RS06605 PF00679 Elongation factor G C-terminus IR188_RS06605 PF00009 Elongation factor Tu GTP binding domain IR188_RS06605 PF03144 Elongation factor Tu domain 2 IR188_RS06605 PF06421 GTP-binding protein LepA C-terminus IR188_RS06610 PF10502 Signal peptidase, peptidase S26 IR188_RS06615 PF14622 Ribonuclease-III-like IR188_RS06615 PF00035 Double-stranded RNA binding motif IR188_RS06620 PF01926 50S ribosome-binding GTPase IR188_RS06620 PF07650 KH domain IR188_RS06625 PF02565 Recombination protein O C terminal IR188_RS06625 PF11967 Recombination protein O N terminal IR188_RS06630 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ IR188_RS06635 PF01648 4'-phosphopantetheinyl transferase superfamily IR188_RS06640 PF12838 4Fe-4S dicluster domain IR188_RS06675 PF00579 tRNA synthetases class I (W and Y) IR188_RS06685 PF00557 Metallopeptidase family M24 IR188_RS06690 PF17922 Tetracyclin repressor-like, C-terminal domain IR188_RS06690 PF00440 Bacterial regulatory proteins, tetR family IR188_RS06695 PF07690 Major Facilitator Superfamily IR188_RS06700 PF01810 LysE type translocator IR188_RS06705 PF14437 MafB19-like deaminase IR188_RS06710 PF01464 Transglycosylase SLT domain IR188_RS06710 PF00497 Bacterial extracellular solute-binding proteins, family 3 IR188_RS06715 PF02769 AIR synthase related protein, C-terminal domain IR188_RS06715 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain IR188_RS06715 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal IR188_RS06720 PF07715 TonB-dependent Receptor Plug Domain IR188_RS06725 PF06472 ABC transporter transmembrane region 2 IR188_RS06725 PF00005 ABC transporter IR188_RS06730 PF00675 Insulinase (Peptidase family M16) IR188_RS06730 PF05193 Peptidase M16 inactive domain IR188_RS06740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IR188_RS06740 PF00512 His Kinase A (phospho-acceptor) domain IR188_RS06745 PF13942 YfhG lipoprotein IR188_RS06750 PF00072 Response regulator receiver domain IR188_RS06750 PF00158 Sigma-54 interaction domain IR188_RS06755 PF02540 NAD synthase IR188_RS06755 PF00795 Carbon-nitrogen hydrolase IR188_RS06760 PF00543 Nitrogen regulatory protein P-II IR188_RS06770 PF00042 Globin IR188_RS06770 PF00175 Oxidoreductase NAD-binding domain IR188_RS06770 PF00970 Oxidoreductase FAD-binding domain IR188_RS06775 PF00464 Serine hydroxymethyltransferase IR188_RS06780 PF12832 MFS_1 like family IR188_RS06785 PF00459 Inositol monophosphatase family IR188_RS06790 PF00588 SpoU rRNA Methylase family IR188_RS06795 PF02082 Transcriptional regulator IR188_RS06800 PF00266 Aminotransferase class-V IR188_RS06805 PF01592 NifU-like N terminal domain IR188_RS06810 PF01521 Iron-sulphur cluster biosynthesis IR188_RS06815 PF07743 HSCB C-terminal oligomerisation domain IR188_RS06820 PF00012 Hsp70 protein IR188_RS06825 PF00111 2Fe-2S iron-sulfur cluster binding domain IR188_RS06830 PF04384 Iron-sulphur cluster assembly IR188_RS06835 PF00883 Cytosol aminopeptidase family, catalytic domain IR188_RS06835 PF12404 Peptidase IR188_RS06845 PF07678 A-macroglobulin TED domain IR188_RS06845 PF07703 Alpha-2-macroglobulin bait region domain IR188_RS06845 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain IR188_RS06845 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain IR188_RS06845 PF11974 Bacterial alpha-2-macroglobulin MG3 domain IR188_RS06845 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain IR188_RS06845 PF17962 Bacterial macroglobulin domain 6 IR188_RS06845 PF01835 MG2 domain IR188_RS06845 PF00207 Alpha-2-macroglobulin family IR188_RS06850 PF00912 Transglycosylase IR188_RS06850 PF00905 Penicillin binding protein transpeptidase domain IR188_RS06850 PF06832 Penicillin-Binding Protein C-terminus Family IR188_RS06855 PF00334 Nucleoside diphosphate kinase IR188_RS06860 PF00582 Universal stress protein family IR188_RS06865 PF04055 Radical SAM superfamily IR188_RS06875 PF13464 Domain of unknown function (DUF4115) IR188_RS06880 PF04551 GcpE protein IR188_RS06885 PF03129 Anticodon binding domain IR188_RS06885 PF13393 Histidyl-tRNA synthetase IR188_RS06890 PF09976 Tetratricopeptide repeat-like domain IR188_RS06895 PF13360 PQQ-like domain IR188_RS06900 PF01926 50S ribosome-binding GTPase IR188_RS06900 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal IR188_RS06905 PF16485 Protealysin propeptide IR188_RS06905 PF02868 Thermolysin metallopeptidase, alpha-helical domain IR188_RS06905 PF01447 Thermolysin metallopeptidase, catalytic domain IR188_RS06910 PF01218 Coproporphyrinogen III oxidase IR188_RS06915 PF00583 Acetyltransferase (GNAT) family IR188_RS06925 PF06572 Protein of unknown function (DUF1131) IR188_RS06930 PF04261 Dyp-type peroxidase family IR188_RS06940 PF00528 Binding-protein-dependent transport system inner membrane component IR188_RS06945 PF00528 Binding-protein-dependent transport system inner membrane component IR188_RS06950 PF00005 ABC transporter IR188_RS06955 PF00291 Pyridoxal-phosphate dependent enzyme IR188_RS06960 PF13673 Acetyltransferase (GNAT) domain IR188_RS06960 PF00958 GMP synthase C terminal domain IR188_RS06960 PF00117 Glutamine amidotransferase class-I IR188_RS06960 PF03352 Methyladenine glycosylase IR188_RS06960 PF13302 Acetyltransferase (GNAT) domain IR188_RS06975 PF03692 Putative zinc- or iron-chelating domain IR188_RS06980 PF06719 AraC-type transcriptional regulator N-terminus IR188_RS06980 PF12833 Helix-turn-helix domain IR188_RS06985 PF02525 Flavodoxin-like fold IR188_RS06990 PF01810 LysE type translocator IR188_RS07000 PF08264 Anticodon-binding domain of tRNA IR188_RS07000 PF09334 tRNA synthetases class I (M) IR188_RS07000 PF01588 Putative tRNA binding domain IR188_RS07005 PF12833 Helix-turn-helix domain IR188_RS07010 PF00854 POT family IR188_RS07015 PF07690 Major Facilitator Superfamily IR188_RS07020 PF03279 Bacterial lipid A biosynthesis acyltransferase IR188_RS07025 PF00072 Response regulator receiver domain IR188_RS07025 PF00196 Bacterial regulatory proteins, luxR family IR188_RS07030 PF00512 His Kinase A (phospho-acceptor) domain IR188_RS07030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IR188_RS07035 PF13247 4Fe-4S dicluster domain IR188_RS07040 PF03916 Polysulphide reductase, NrfD IR188_RS07045 PF01568 Molydopterin dinucleotide binding domain IR188_RS07045 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IR188_RS07045 PF00384 Molybdopterin oxidoreductase IR188_RS07050 PF13991 BssS protein family IR188_RS07055 PF01979 Amidohydrolase family IR188_RS07065 PF13744 Helix-turn-helix domain IR188_RS07095 PF00313 'Cold-shock' DNA-binding domain IR188_RS07100 PF10781 Dextransucrase DSRB IR188_RS07105 PF02308 MgtC family IR188_RS07110 PF05247 Flagellar transcriptional activator (FlhD) IR188_RS07115 PF05280 Flagellar transcriptional activator (FlhC) IR188_RS07120 PF01618 MotA/TolQ/ExbB proton channel family IR188_RS07125 PF00691 OmpA family IR188_RS07125 PF13677 Membrane MotB of proton-channel complex MotA/MotB IR188_RS07130 PF09078 CheY binding IR188_RS07130 PF02895 Signal transducing histidine kinase, homodimeric domain IR188_RS07130 PF01627 Hpt domain IR188_RS07130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IR188_RS07130 PF01584 CheW-like domain IR188_RS07135 PF01584 CheW-like domain IR188_RS07140 PF00672 HAMP domain IR188_RS07140 PF02203 Tar ligand binding domain homologue IR188_RS07140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IR188_RS07145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IR188_RS07145 PF00672 HAMP domain IR188_RS07145 PF02203 Tar ligand binding domain homologue IR188_RS07150 PF03705 CheR methyltransferase, all-alpha domain IR188_RS07150 PF01739 CheR methyltransferase, SAM binding domain IR188_RS07155 PF01339 CheB methylesterase IR188_RS07155 PF00072 Response regulator receiver domain IR188_RS07160 PF00072 Response regulator receiver domain IR188_RS07165 PF04344 Chemotaxis phosphatase, CheZ IR188_RS07175 PF01312 FlhB HrpN YscU SpaS Family IR188_RS07180 PF00771 FHIPEP family IR188_RS07185 PF12255 Insecticide toxin TcdB middle/C-terminal region IR188_RS07185 PF12256 Insecticide toxin TcdB middle/N-terminal region IR188_RS07185 PF03534 Salmonella virulence plasmid 65kDa B protein IR188_RS07190 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain IR188_RS07190 PF18413 Neuraminidase-like domain IR188_RS07190 PF18413 Neuraminidase-like domain IR188_RS07190 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain IR188_RS07195 PF05130 FlgN protein IR188_RS07200 PF04316 Anti-sigma-28 factor, FlgM IR188_RS07210 PF00460 Flagella basal body rod protein IR188_RS07215 PF00460 Flagella basal body rod protein IR188_RS07215 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IR188_RS07220 PF13861 FlgD Tudor-like domain IR188_RS07220 PF13860 FlgD Ig-like domain IR188_RS07220 PF03963 Flagellar hook capping protein - N-terminal region IR188_RS07225 PF00460 Flagella basal body rod protein IR188_RS07225 PF07559 Flagellar basal body protein FlaE IR188_RS07225 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IR188_RS07230 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IR188_RS07230 PF00460 Flagella basal body rod protein IR188_RS07235 PF00460 Flagella basal body rod protein IR188_RS07235 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IR188_RS07240 PF02107 Flagellar L-ring protein IR188_RS07245 PF02119 Flagellar P-ring protein IR188_RS07250 PF10135 Rod binding protein IR188_RS07250 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase IR188_RS07255 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IR188_RS07255 PF00460 Flagella basal body rod protein IR188_RS07260 PF00669 Bacterial flagellin N-terminal helical region IR188_RS07265 PF03466 LysR substrate binding domain IR188_RS07265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IR188_RS07275 PF01311 Bacterial export proteins, family 1 IR188_RS07280 PF01313 Bacterial export proteins, family 3 IR188_RS07285 PF00813 FliP family IR188_RS07290 PF04347 Flagellar biosynthesis protein, FliO IR188_RS07295 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term IR188_RS07295 PF16973 Flagellar motor switch protein FliN N-terminal IR188_RS07300 PF02154 Flagellar motor switch protein FliM IR188_RS07300 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term IR188_RS07305 PF03748 Flagellar basal body-associated protein FliL IR188_RS07310 PF02120 Flagellar hook-length control protein FliK IR188_RS07315 PF02050 Flagellar FliJ protein IR188_RS07320 PF18269 T3SS EscN ATPase C-terminal domain IR188_RS07320 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IR188_RS07325 PF02108 Flagellar assembly protein FliH IR188_RS07330 PF14842 FliG N-terminal domain IR188_RS07330 PF01706 FliG C-terminal domain IR188_RS07330 PF14841 FliG middle domain IR188_RS07335 PF08345 Flagellar M-ring protein C-terminal IR188_RS07335 PF01514 Secretory protein of YscJ/FliF family IR188_RS07340 PF02049 Flagellar hook-basal body complex protein FliE IR188_RS07360 PF03891 Domain of unknown function (DUF333) IR188_RS07370 PF02537 CrcB-like protein, Camphor Resistance (CrcB) IR188_RS07375 PF02537 CrcB-like protein, Camphor Resistance (CrcB) IR188_RS07380 PF05400 Flagellar protein FliT IR188_RS07385 PF02561 Flagellar protein FliS IR188_RS07390 PF07196 Flagellin hook IN motif IR188_RS07390 PF07195 Flagellar hook-associated protein 2 C-terminus IR188_RS07390 PF02465 Flagellar hook-associated protein 2 N-terminus IR188_RS07395 PF00700 Bacterial flagellin C-terminal helical region IR188_RS07395 PF00669 Bacterial flagellin N-terminal helical region IR188_RS07400 PF00700 Bacterial flagellin C-terminal helical region IR188_RS07400 PF00669 Bacterial flagellin N-terminal helical region IR188_RS07405 PF04542 Sigma-70 region 2 IR188_RS07405 PF04545 Sigma-70, region 4 IR188_RS07405 PF04539 Sigma-70 region 3 IR188_RS07410 PF02899 Phage integrase, N-terminal SAM-like domain IR188_RS07415 PF00171 Aldehyde dehydrogenase family IR188_RS07415 PF01619 Proline dehydrogenase IR188_RS07415 PF14850 DNA-binding domain of Proline dehydrogenase IR188_RS07415 PF18327 Proline utilization A proline dehydrogenase N-terminal domain IR188_RS07420 PF00474 Sodium:solute symporter family IR188_RS07425 PF00324 Amino acid permease IR188_RS07435 PF00535 Glycosyl transferase family 2 IR188_RS07440 PF00884 Sulfatase IR188_RS07450 PF00860 Permease family IR188_RS07455 PF13382 Adenine deaminase C-terminal domain IR188_RS07455 PF01979 Amidohydrolase family IR188_RS07460 PF00005 ABC transporter IR188_RS07465 PF00528 Binding-protein-dependent transport system inner membrane component IR188_RS07470 PF00497 Bacterial extracellular solute-binding proteins, family 3 IR188_RS07495 PF01053 Cys/Met metabolism PLP-dependent enzyme IR188_RS07500 PF03222 Tryptophan/tyrosine permease family IR188_RS07505 PF00111 2Fe-2S iron-sulfur cluster binding domain IR188_RS07510 PF00268 Ribonucleotide reductase, small chain IR188_RS07515 PF00317 Ribonucleotide reductase, all-alpha domain IR188_RS07515 PF03477 ATP cone domain IR188_RS07515 PF02867 Ribonucleotide reductase, barrel domain IR188_RS07525 PF00521 DNA gyrase/topoisomerase IV, subunit A IR188_RS07525 PF03989 DNA gyrase C-terminal domain, beta-propeller IR188_RS07530 PF00072 Response regulator receiver domain IR188_RS07530 PF09456 RcsC Alpha-Beta-Loop (ABL) IR188_RS07530 PF00512 His Kinase A (phospho-acceptor) domain IR188_RS07530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IR188_RS07535 PF00072 Response regulator receiver domain IR188_RS07535 PF00196 Bacterial regulatory proteins, luxR family IR188_RS07540 PF16359 RcsD-ABL domain IR188_RS07540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IR188_RS07540 PF01627 Hpt domain IR188_RS07560 PF00582 Universal stress protein family IR188_RS07570 PF06530 Phage antitermination protein Q IR188_RS07575 PF00313 'Cold-shock' DNA-binding domain IR188_RS07590 PF00582 Universal stress protein family IR188_RS07595 PF00011 Hsp20/alpha crystallin family IR188_RS07615 PF00959 Phage lysozyme IR188_RS07655 PF00664 ABC transporter transmembrane region IR188_RS07655 PF00005 ABC transporter IR188_RS07655 PF03412 Peptidase C39 family IR188_RS07660 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) IR188_RS07660 PF02382 N-terminal domain in RTX protein IR188_RS07660 PF08339 RTX C-terminal domain IR188_RS07665 PF02794 RTX toxin acyltransferase family IR188_RS07680 PF13439 Glycosyltransferase Family 4 IR188_RS07680 PF00534 Glycosyl transferases group 1 IR188_RS07765 PF02413 Caudovirales tail fibre assembly protein, lambda gpK IR188_RS07780 PF06940 Domain of unknown function (DUF1287) IR188_RS07785 PF05433 Glycine zipper 2TM domain IR188_RS07795 PF12833 Helix-turn-helix domain IR188_RS07795 PF06445 GyrI-like small molecule binding domain IR188_RS07810 PF00892 EamA-like transporter family IR188_RS07820 PF00924 Mechanosensitive ion channel IR188_RS07825 PF03729 Short repeat of unknown function (DUF308) IR188_RS07850 PF00512 His Kinase A (phospho-acceptor) domain IR188_RS07850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IR188_RS07855 PF00072 Response regulator receiver domain IR188_RS07855 PF00486 Transcriptional regulatory protein, C terminal IR188_RS07865 PF12706 Beta-lactamase superfamily domain IR188_RS07865 PF03099 Biotin/lipoate A/B protein ligase family IR188_RS07870 PF03358 NADPH-dependent FMN reductase IR188_RS07875 PF00326 Prolyl oligopeptidase family IR188_RS07875 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain IR188_RS07880 PF13742 OB-fold nucleic acid binding domain IR188_RS07880 PF02601 Exonuclease VII, large subunit IR188_RS07885 PF00478 IMP dehydrogenase / GMP reductase domain IR188_RS07885 PF00571 CBS domain IR188_RS07890 PF00117 Glutamine amidotransferase class-I IR188_RS07890 PF02540 NAD synthase IR188_RS07890 PF00958 GMP synthase C terminal domain IR188_RS07895 PF00589 Phage integrase family IR188_RS07895 PF13356 Arm DNA-binding domain IR188_RS07910 PF05063 MT-A70 IR188_RS07940 PF00145 C-5 cytosine-specific DNA methylase IR188_RS07980 PF17948 DnaT DNA-binding domain IR188_RS07995 PF05866 Endodeoxyribonuclease RusA IR188_RS08115 PF01757 Acyltransferase family IR188_RS08140 PF00857 Isochorismatase family IR188_RS08145 PF07969 Amidohydrolase family IR188_RS08150 PF05977 Transmembrane secretion effector IR188_RS08160 PF00388 Phosphatidylinositol-specific phospholipase C, X domain IR188_RS08165 PF05658 Head domain of trimeric autotransporter adhesin IR188_RS08165 PF05662 Coiled stalk of trimeric autotransporter adhesin IR188_RS08165 PF03895 YadA-like membrane anchor domain IR188_RS08180 PF13847 Methyltransferase domain IR188_RS08185 PF02659 Putative manganese efflux pump IR188_RS08190 PF06173 Protein of unknown function (DUF986) IR188_RS08195 PF03613 PTS system mannose/fructose/sorbose family IID component IR188_RS08200 PF03609 PTS system sorbose-specific iic component IR188_RS08205 PF03610 PTS system fructose IIA component IR188_RS08205 PF03830 PTS system sorbose subfamily IIB component IR188_RS08210 PF03315 Serine dehydratase beta chain IR188_RS08210 PF03313 Serine dehydratase alpha chain IR188_RS08215 PF00293 NUDIX domain IR188_RS08220 PF00425 chorismate binding enzyme IR188_RS08220 PF04715 Anthranilate synthase component I, N terminal region IR188_RS08225 PF03701 Uncharacterised protein family (UPF0181) IR188_RS08230 PF13995 YebF-like protein IR188_RS08235 PF06440 DNA polymerase III, theta subunit IR188_RS08240 PF00210 Ferritin-like domain IR188_RS08250 PF05425 Copper resistance protein D IR188_RS08255 PF10709 Protein of unknown function (DUF2511) IR188_RS08260 PF13185 GAF domain IR188_RS08265 PF17516 ProQ C-terminal domain IR188_RS08265 PF04352 ProQ/FINO family IR188_RS08270 PF17804 Tail specific protease N-terminal domain IR188_RS08270 PF03572 Peptidase family S41 IR188_RS08270 PF11818 C-terminal domain of tail specific protease (DUF3340) IR188_RS08270 PF00595 PDZ domain IR188_RS08275 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain IR188_RS08275 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain IR188_RS08280 PF04343 Protein of unknown function, DUF488 IR188_RS08285 PF00490 Delta-aminolevulinic acid dehydratase IR188_RS08300 PF10769 Protein of unknown function (DUF2594) IR188_RS08305 PF01256 Carbohydrate kinase IR188_RS08310 PF00582 Universal stress protein family IR188_RS08315 PF00582 Universal stress protein family IR188_RS08335 PF06738 Putative threonine/serine exporter IR188_RS08340 PF12821 Threonine/Serine exporter, ThrE IR188_RS08350 PF04231 Endonuclease I IR188_RS08355 PF02562 PhoH-like protein IR188_RS08360 PF04954 Siderophore-interacting protein IR188_RS08360 PF08021 Siderophore-interacting FAD-binding domain IR188_RS08370 PF02322 Cytochrome bd terminal oxidase subunit II IR188_RS08375 PF01654 Cytochrome bd terminal oxidase subunit I IR188_RS08380 PF00155 Aminotransferase class I and II IR188_RS08380 PF00392 Bacterial regulatory proteins, gntR family IR188_RS08385 PF01810 LysE type translocator IR188_RS08390 PF01037 Lrp/AsnC ligand binding domain IR188_RS08400 PF02653 Branched-chain amino acid transport system / permease component IR188_RS08405 PF02653 Branched-chain amino acid transport system / permease component IR188_RS08410 PF00005 ABC transporter IR188_RS08420 PF04073 Aminoacyl-tRNA editing domain IR188_RS08425 PF02386 Cation transport protein IR188_RS08445 PF06071 Protein of unknown function (DUF933) IR188_RS08445 PF01926 50S ribosome-binding GTPase IR188_RS08450 PF01195 Peptidyl-tRNA hydrolase IR188_RS08460 PF14572 Phosphoribosyl synthetase-associated domain IR188_RS08460 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase IR188_RS08465 PF00288 GHMP kinases N terminal domain IR188_RS08465 PF08544 GHMP kinases C terminal IR188_RS08470 PF03550 Outer membrane lipoprotein LolB IR188_RS08475 PF01488 Shikimate / quinate 5-dehydrogenase IR188_RS08475 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain IR188_RS08475 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain IR188_RS08480 PF00472 RF-1 domain IR188_RS08480 PF03462 PCRF domain IR188_RS08485 PF17827 PrmC N-terminal domain IR188_RS08485 PF13847 Methyltransferase domain IR188_RS08490 PF13369 Transglutaminase-like superfamily IR188_RS08495 PF00793 DAHP synthetase I family IR188_RS08500 PF16199 Radical_SAM C-terminal domain IR188_RS08500 PF04055 Radical SAM superfamily IR188_RS08510 PF01740 STAS domain IR188_RS08510 PF00916 Sulfate permease family IR188_RS08520 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IR188_RS08525 PF02613 Nitrate reductase delta subunit IR188_RS08530 PF03600 Citrate transporter IR188_RS08535 PF07273 Protein of unknown function (DUF1439) IR188_RS08540 PF07690 Major Facilitator Superfamily IR188_RS08545 PF13302 Acetyltransferase (GNAT) domain IR188_RS08550 PF03023 Lipid II flippase MurJ IR188_RS08560 PF05746 DALR anticodon binding domain IR188_RS08560 PF00750 tRNA synthetases class I (R) IR188_RS08560 PF03485 Arginyl tRNA synthetase N terminal domain IR188_RS08565 PF06185 YecM protein IR188_RS08570 PF03932 CutC family IR188_RS08580 PF08003 Protein of unknown function (DUF1698) IR188_RS08585 PF13649 Methyltransferase domain IR188_RS08590 PF01124 MAPEG family IR188_RS08595 PF02938 GAD domain IR188_RS08595 PF00152 tRNA synthetases class II (D, K and N) IR188_RS08595 PF01336 OB-fold nucleic acid binding domain IR188_RS08600 PF00293 NUDIX domain IR188_RS08605 PF01709 Transcriptional regulator IR188_RS08610 PF02075 Crossover junction endodeoxyribonuclease RuvC IR188_RS08615 PF01330 RuvA N terminal domain IR188_RS08615 PF07499 RuvA, C-terminal domain IR188_RS08620 PF17864 RuvB AAA lid domain IR188_RS08620 PF05496 Holliday junction DNA helicase RuvB P-loop domain IR188_RS08620 PF05491 RuvB C-terminal winged helix domain IR188_RS08625 PF00117 Glutamine amidotransferase class-I IR188_RS08630 PF00950 ABC 3 transport family IR188_RS08635 PF00005 ABC transporter IR188_RS08640 PF01297 Zinc-uptake complex component A periplasmic IR188_RS08645 PF01476 LysM domain IR188_RS08645 PF01551 Peptidase family M23 IR188_RS08645 PF08525 Opacity-associated protein A N-terminal motif IR188_RS08650 PF03279 Bacterial lipid A biosynthesis acyltransferase IR188_RS08655 PF02887 Pyruvate kinase, alpha/beta domain IR188_RS08655 PF00224 Pyruvate kinase, barrel domain IR188_RS08660 PF01418 Helix-turn-helix domain, rpiR family IR188_RS08660 PF01380 SIS domain IR188_RS08665 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain IR188_RS08665 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain IR188_RS08670 PF00893 Small Multidrug Resistance protein IR188_RS08675 PF00893 Small Multidrug Resistance protein IR188_RS08680 PF00072 Response regulator receiver domain IR188_RS08680 PF00486 Transcriptional regulatory protein, C terminal IR188_RS08685 PF00512 His Kinase A (phospho-acceptor) domain IR188_RS08685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IR188_RS08690 PF00174 Oxidoreductase molybdopterin binding domain IR188_RS08695 PF01794 Ferric reductase like transmembrane component IR188_RS08710 PF03992 Antibiotic biosynthesis monooxygenase IR188_RS08715 PF01791 DeoC/LacD family aldolase IR188_RS08720 PF13407 Periplasmic binding protein domain IR188_RS08725 PF02653 Branched-chain amino acid transport system / permease component IR188_RS08730 PF02653 Branched-chain amino acid transport system / permease component IR188_RS08735 PF00005 ABC transporter IR188_RS08740 PF00325 Bacterial regulatory proteins, crp family IR188_RS08740 PF04198 Putative sugar-binding domain IR188_RS08745 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IR188_RS08745 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IR188_RS08750 PF01042 Endoribonuclease L-PSP IR188_RS08755 PF04851 Type III restriction enzyme, res subunit IR188_RS08755 PF13307 Helicase C-terminal domain IR188_RS08760 PF00814 Glycoprotease family IR188_RS08765 PF03843 Outer membrane lipoprotein Slp family IR188_RS08770 PF00501 AMP-binding enzyme IR188_RS08770 PF13193 AMP-binding enzyme C-terminal domain IR188_RS08775 PF00570 HRDC domain IR188_RS08775 PF01612 3'-5' exonuclease IR188_RS08780 PF03776 Septum formation topological specificity factor MinE IR188_RS08785 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain IR188_RS08790 PF03775 Septum formation inhibitor MinC, C-terminal domain IR188_RS08790 PF05209 Septum formation inhibitor MinC, N-terminal domain IR188_RS08795 PF05166 YcgL domain IR188_RS08800 PF13406 Transglycosylase SLT domain IR188_RS08805 PF01557 Fumarylacetoacetate (FAA) hydrolase family IR188_RS08810 PF03692 Putative zinc- or iron-chelating domain IR188_RS08820 PF13649 Methyltransferase domain IR188_RS08830 PF00005 ABC transporter IR188_RS08835 PF01032 FecCD transport family IR188_RS08855 PF00158 Sigma-54 interaction domain IR188_RS08855 PF01590 GAF domain IR188_RS08860 PF00258 Flavodoxin IR188_RS08860 PF00301 Rubredoxin IR188_RS08860 PF00753 Metallo-beta-lactamase superfamily IR188_RS08865 PF07992 Pyridine nucleotide-disulphide oxidoreductase IR188_RS08865 PF18113 Rubredoxin binding C-terminal domain IR188_RS08870 PF04405 Domain of Unknown function (DUF542) IR188_RS08870 PF01814 Hemerythrin HHE cation binding domain IR188_RS08885 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IR188_RS08885 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IR188_RS08890 PF11739 Dicarboxylate transport IR188_RS08895 PF13617 YnbE-like lipoprotein IR188_RS08900 PF07027 Protein of unknown function (DUF1318) IR188_RS08905 PF02525 Flavodoxin-like fold IR188_RS08910 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold IR188_RS08910 PF00271 Helicase conserved C-terminal domain IR188_RS08910 PF00270 DEAD/DEAH box helicase IR188_RS08910 PF11898 Domain of unknown function (DUF3418) IR188_RS08910 PF04408 Helicase associated domain (HA2) IR188_RS08915 PF13520 Amino acid permease IR188_RS08920 PF07338 Protein of unknown function (DUF1471) IR188_RS08925 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch IR188_RS08925 PF05222 Alanine dehydrogenase/PNT, N-terminal domain IR188_RS08925 PF01262 Alanine dehydrogenase/PNT, C-terminal domain IR188_RS08930 PF02233 NAD(P) transhydrogenase beta subunit IR188_RS08940 PF00582 Universal stress protein family IR188_RS08945 PF00027 Cyclic nucleotide-binding domain IR188_RS08945 PF13545 Crp-like helix-turn-helix domain IR188_RS08950 PF02801 Beta-ketoacyl synthase, C-terminal domain IR188_RS08950 PF00107 Zinc-binding dehydrogenase IR188_RS08950 PF08240 Alcohol dehydrogenase GroES-like domain IR188_RS08950 PF08659 KR domain IR188_RS08950 PF16197 Ketoacyl-synthetase C-terminal extension IR188_RS08950 PF00109 Beta-ketoacyl synthase, N-terminal domain IR188_RS08950 PF14765 Polyketide synthase dehydratase IR188_RS08950 PF00550 Phosphopantetheine attachment site IR188_RS08950 PF00698 Acyl transferase domain IR188_RS08955 PF03551 Transcriptional regulator PadR-like family IR188_RS08965 PF00155 Aminotransferase class I and II IR188_RS08970 PF00367 phosphotransferase system, EIIB IR188_RS08970 PF02378 Phosphotransferase system, EIIC IR188_RS08975 PF00356 Bacterial regulatory proteins, lacI family IR188_RS08975 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family IR188_RS08990 PF13344 Haloacid dehalogenase-like hydrolase IR188_RS08990 PF00293 NUDIX domain IR188_RS08995 PF05221 S-adenosyl-L-homocysteine hydrolase IR188_RS08995 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain IR188_RS09005 PF01212 Beta-eliminating lyase IR188_RS09025 PF00892 EamA-like transporter family IR188_RS09030 PF00155 Aminotransferase class I and II IR188_RS09030 PF00392 Bacterial regulatory proteins, gntR family IR188_RS09050 PF08007 Cupin superfamily protein IR188_RS09060 PF09905 DNA-binding protein VF530 IR188_RS09065 PF00581 Rhodanese-like domain IR188_RS09070 PF04143 Sulphur transport IR188_RS09075 PF00593 TonB dependent receptor IR188_RS09075 PF07715 TonB-dependent Receptor Plug Domain IR188_RS09085 PF01032 FecCD transport family IR188_RS09090 PF00005 ABC transporter IR188_RS09095 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IR188_RS09100 PF16925 Tetracyclin repressor-like, C-terminal domain IR188_RS09100 PF00440 Bacterial regulatory proteins, tetR family IR188_RS09105 PF00012 Hsp70 protein IR188_RS09120 PF01979 Amidohydrolase family IR188_RS09125 PF07308 Protein of unknown function (DUF1456) IR188_RS09130 PF01694 Rhomboid family IR188_RS09155 PF00873 AcrB/AcrD/AcrF family IR188_RS09170 PF01266 FAD dependent oxidoreductase IR188_RS09175 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 IR188_RS09190 PF00005 ABC transporter IR188_RS09190 PF12848 ABC transporter IR188_RS09195 PF01037 Lrp/AsnC ligand binding domain IR188_RS09200 PF00893 Small Multidrug Resistance protein IR188_RS09215 PF00892 EamA-like transporter family IR188_RS09235 PF00293 NUDIX domain IR188_RS09240 PF01047 MarR family IR188_RS09240 PF00583 Acetyltransferase (GNAT) family IR188_RS09245 PF03466 LysR substrate binding domain IR188_RS09245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IR188_RS09250 PF03222 Tryptophan/tyrosine permease family IR188_RS09255 PF01053 Cys/Met metabolism PLP-dependent enzyme IR188_RS09280 PF07690 Major Facilitator Superfamily IR188_RS09285 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IR188_RS09290 PF03466 LysR substrate binding domain IR188_RS09290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IR188_RS09295 PF07690 Major Facilitator Superfamily IR188_RS09300 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IR188_RS09305 PF07690 Major Facilitator Superfamily IR188_RS09320 PF00561 alpha/beta hydrolase fold IR188_RS09325 PF07690 Major Facilitator Superfamily IR188_RS09330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IR188_RS09330 PF03466 LysR substrate binding domain IR188_RS09335 PF00144 Beta-lactamase IR188_RS09335 PF11954 Domain of unknown function (DUF3471) IR188_RS09345 PF01965 DJ-1/PfpI family IR188_RS09355 PF02567 Phenazine biosynthesis-like protein IR188_RS09360 PF02567 Phenazine biosynthesis-like protein IR188_RS09400 PF00005 ABC transporter IR188_RS09405 PF01032 FecCD transport family IR188_RS09415 PF13411 MerR HTH family regulatory protein IR188_RS09420 PF07690 Major Facilitator Superfamily IR188_RS09430 PF00440 Bacterial regulatory proteins, tetR family IR188_RS09430 PF02909 Tetracyclin repressor-like, C-terminal domain IR188_RS09455 PF03536 Salmonella virulence-associated 28kDa protein IR188_RS09460 PF00005 ABC transporter IR188_RS09460 PF12848 ABC transporter IR188_RS09470 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain IR188_RS09470 PF12833 Helix-turn-helix domain IR188_RS09470 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain IR188_RS09470 PF02805 Metal binding domain of Ada IR188_RS09475 PF13532 2OG-Fe(II) oxygenase superfamily IR188_RS09480 PF00158 Sigma-54 interaction domain IR188_RS09480 PF02954 Bacterial regulatory protein, Fis family IR188_RS09480 PF06506 Propionate catabolism activator IR188_RS09490 PF00285 Citrate synthase, C-terminal domain IR188_RS09495 PF03972 MmgE/PrpD family IR188_RS09505 PF00106 short chain dehydrogenase IR188_RS09510 PF06932 Protein of unknown function (DUF1283) IR188_RS09525 PF00480 ROK family IR188_RS09535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IR188_RS09535 PF03466 LysR substrate binding domain IR188_RS09540 PF07690 Major Facilitator Superfamily IR188_RS09550 PF05472 DNA replication terminus site-binding protein (Ter protein) IR188_RS09555 PF00206 Lyase IR188_RS09555 PF10415 Fumarase C C-terminus IR188_RS09560 PF01238 Phosphomannose isomerase type I IR188_RS09565 PF06097 Bacterial protein of unknown function (DUF945) IR188_RS09570 PF00962 Adenosine/AMP deaminase IR188_RS09575 PF04536 TPM domain IR188_RS09580 PF13593 SBF-like CPA transporter family (DUF4137) IR188_RS09585 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IR188_RS09585 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IR188_RS09590 PF02508 Rnf-Nqr subunit, membrane protein IR188_RS09595 PF04060 Putative Fe-S cluster IR188_RS09600 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit IR188_RS09600 PF13237 4Fe-4S dicluster domain IR188_RS09600 PF13375 RnfC Barrel sandwich hybrid domain IR188_RS09600 PF10531 SLBB domain IR188_RS09605 PF03116 NQR2, RnfD, RnfE family IR188_RS09610 PF04205 FMN-binding domain IR188_RS09615 PF02508 Rnf-Nqr subunit, membrane protein IR188_RS09620 PF10576 Iron-sulfur binding domain of endonuclease III IR188_RS09620 PF00633 Helix-hairpin-helix motif IR188_RS09620 PF00730 HhH-GPD superfamily base excision DNA repair protein IR188_RS09625 PF17876 Cold shock domain IR188_RS09625 PF08206 Ribonuclease B OB domain IR188_RS09625 PF00773 RNB domain IR188_RS09625 PF00575 S1 RNA binding domain IR188_RS09630 PF05433 Glycine zipper 2TM domain IR188_RS09635 PF01253 Translation initiation factor SUI1 IR188_RS09640 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family IR188_RS09645 PF18073 Rubredoxin metal binding domain IR188_RS09650 PF06305 Lipopolysaccharide assembly protein A domain IR188_RS09655 PF01569 PAP2 superfamily IR188_RS09660 PF00925 GTP cyclohydrolase II IR188_RS09665 PF00330 Aconitase family (aconitate hydratase) IR188_RS09665 PF00694 Aconitase C-terminal domain IR188_RS09675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IR188_RS09675 PF03466 LysR substrate binding domain IR188_RS09680 PF01396 Topoisomerase DNA binding C4 zinc finger IR188_RS09680 PF01751 Toprim domain IR188_RS09680 PF01131 DNA topoisomerase IR188_RS09680 PF08272 Topoisomerase I zinc-ribbon-like IR188_RS09685 PF10692 Protein of unknown function (DUF2498) IR188_RS09690 PF01343 Peptidase family S49 IR188_RS09690 PF08496 Peptidase family S49 N-terminal IR188_RS09695 PF00106 short chain dehydrogenase IR188_RS09705 PF01479 S4 domain IR188_RS09705 PF00849 RNA pseudouridylate synthase IR188_RS09710 PF01300 Telomere recombination IR188_RS09715 PF02811 PHP domain IR188_RS09720 PF00425 chorismate binding enzyme IR188_RS09720 PF04715 Anthranilate synthase component I, N terminal region IR188_RS09725 PF00591 Glycosyl transferase family, a/b domain IR188_RS09725 PF00117 Glutamine amidotransferase class-I IR188_RS09725 PF02885 Glycosyl transferase family, helical bundle domain IR188_RS09730 PF00591 Glycosyl transferase family, a/b domain IR188_RS09730 PF02885 Glycosyl transferase family, helical bundle domain IR188_RS09730 PF00117 Glutamine amidotransferase class-I IR188_RS09735 PF00218 Indole-3-glycerol phosphate synthase IR188_RS09735 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase IR188_RS09740 PF00291 Pyridoxal-phosphate dependent enzyme IR188_RS09745 PF00290 Tryptophan synthase alpha chain IR188_RS09755 PF03922 OmpW family IR188_RS09770 PF04076 Bacterial OB fold (BOF) protein IR188_RS09775 PF00486 Transcriptional regulatory protein, C terminal IR188_RS09775 PF00072 Response regulator receiver domain IR188_RS09780 PF08521 Two-component sensor kinase N-terminal IR188_RS09780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IR188_RS09780 PF00512 His Kinase A (phospho-acceptor) domain IR188_RS09785 PF01740 STAS domain IR188_RS09785 PF00916 Sulfate permease family IR188_RS09790 PF04279 Intracellular septation protein A IR188_RS09795 PF03061 Thioesterase superfamily IR188_RS09800 PF03880 DbpA RNA binding domain IR188_RS09800 PF00270 DEAD/DEAH box helicase IR188_RS09800 PF00271 Helicase conserved C-terminal domain IR188_RS09810 PF03544 Gram-negative bacterial TonB protein C-terminal IR188_RS09820 PF13396 Phospholipase_D-nuclease N-terminal IR188_RS09820 PF13091 PLD-like domain IR188_RS09825 PF04269 Protein of unknown function, DUF440 IR188_RS09840 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IR188_RS09840 PF00005 ABC transporter IR188_RS09845 PF00005 ABC transporter IR188_RS09845 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IR188_RS09850 PF12911 N-terminal TM domain of oligopeptide transport permease C IR188_RS09850 PF00528 Binding-protein-dependent transport system inner membrane component IR188_RS09855 PF00528 Binding-protein-dependent transport system inner membrane component IR188_RS09860 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IR188_RS09865 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IR188_RS09870 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IR188_RS09875 PF00528 Binding-protein-dependent transport system inner membrane component IR188_RS09880 PF12911 N-terminal TM domain of oligopeptide transport permease C IR188_RS09880 PF00528 Binding-protein-dependent transport system inner membrane component IR188_RS09885 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IR188_RS09885 PF00005 ABC transporter IR188_RS09890 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IR188_RS09890 PF00005 ABC transporter IR188_RS09895 PF01914 MarC family integral membrane protein IR188_RS09900 PF00171 Aldehyde dehydrogenase family IR188_RS09900 PF00465 Iron-containing alcohol dehydrogenase IR188_RS09905 PF00265 Thymidine kinase IR188_RS09910 PF00816 H-NS histone family IR188_RS09915 PF01370 NAD dependent epimerase/dehydratase family IR188_RS09920 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain IR188_RS09920 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain IR188_RS09920 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain IR188_RS09925 PF00483 Nucleotidyl transferase IR188_RS09930 PF00072 Response regulator receiver domain IR188_RS09935 PF02810 SEC-C motif IR188_RS09940 PF00551 Formyl transferase IR188_RS09940 PF01842 ACT domain IR188_RS09950 PF03466 LysR substrate binding domain IR188_RS09950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IR188_RS09955 PF03372 Endonuclease/Exonuclease/phosphatase family IR188_RS09960 PF01751 Toprim domain IR188_RS09960 PF01131 DNA topoisomerase IR188_RS09965 PF00586 AIR synthase related protein, N-terminal domain IR188_RS09965 PF02769 AIR synthase related protein, C-terminal domain IR188_RS09970 PF00881 Nitroreductase family IR188_RS09975 PF01343 Peptidase family S49 IR188_RS09980 PF17763 Glutaminase/Asparaginase C-terminal domain IR188_RS09980 PF00710 Asparaginase, N-terminal IR188_RS09985 PF00857 Isochorismatase family IR188_RS09990 PF07023 Protein of unknown function (DUF1315) IR188_RS09995 PF01641 SelR domain IR188_RS10000 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IR188_RS10000 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IR188_RS10005 PF01263 Aldose 1-epimerase IR188_RS10010 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family IR188_RS10015 PF06629 MltA-interacting protein MipA IR188_RS10020 PF00708 Acylphosphatase IR188_RS10020 PF07503 HypF finger IR188_RS10020 PF01300 Telomere recombination IR188_RS10020 PF17788 HypF Kae1-like domain IR188_RS10025 PF00842 Alanine racemase, C-terminal domain IR188_RS10025 PF01168 Alanine racemase, N-terminal domain IR188_RS10030 PF01266 FAD dependent oxidoreductase IR188_RS10040 PF00392 Bacterial regulatory proteins, gntR family IR188_RS10040 PF07840 FadR C-terminal domain IR188_RS10045 PF06450 Bacterial Na+/H+ antiporter B (NhaB) IR188_RS10050 PF02600 Disulfide bond formation protein DsbB IR188_RS10055 PF03891 Domain of unknown function (DUF333) IR188_RS10060 PF00893 Small Multidrug Resistance protein IR188_RS10065 PF07690 Major Facilitator Superfamily IR188_RS10075 PF12848 ABC transporter IR188_RS10075 PF00005 ABC transporter IR188_RS10090 PF01928 CYTH domain IR188_RS10110 PF01381 Helix-turn-helix IR188_RS10115 PF01381 Helix-turn-helix IR188_RS10120 PF01171 PP-loop family IR188_RS10125 PF01544 CorA-like Mg2+ transporter protein IR188_RS10130 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IR188_RS10135 PF08534 Redoxin IR188_RS10140 PF00158 Sigma-54 interaction domain IR188_RS10140 PF18024 Helix-turn-helix domain IR188_RS10145 PF05128 Domain of unknown function (DUF697) IR188_RS10150 PF04317 YcjX-like family, DUF463 IR188_RS10160 PF04024 PspC domain IR188_RS10165 PF06667 Phage shock protein B IR188_RS10170 PF04012 PspA/IM30 family IR188_RS10175 PF00158 Sigma-54 interaction domain IR188_RS10175 PF02954 Bacterial regulatory protein, Fis family IR188_RS10180 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IR188_RS10185 PF00528 Binding-protein-dependent transport system inner membrane component IR188_RS10190 PF12911 N-terminal TM domain of oligopeptide transport permease C IR188_RS10190 PF00528 Binding-protein-dependent transport system inner membrane component IR188_RS10195 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IR188_RS10195 PF00005 ABC transporter IR188_RS10200 PF00005 ABC transporter IR188_RS10210 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IR188_RS10215 PF00043 Glutathione S-transferase, C-terminal domain IR188_RS10215 PF02798 Glutathione S-transferase, N-terminal domain IR188_RS10220 PF08543 Phosphomethylpyrimidine kinase IR188_RS10225 PF00579 tRNA synthetases class I (W and Y) IR188_RS10225 PF01479 S4 domain IR188_RS10230 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region IR188_RS10230 PF01243 Pyridoxamine 5'-phosphate oxidase IR188_RS10235 PF03702 Anhydro-N-acetylmuramic acid kinase IR188_RS10240 PF05433 Glycine zipper 2TM domain IR188_RS10245 PF01047 MarR family IR188_RS10250 PF06945 Protein of unknown function (DUF1289) IR188_RS10255 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IR188_RS10260 PF00929 Exonuclease IR188_RS10270 PF00462 Glutaredoxin IR188_RS10275 PF01810 LysE type translocator IR188_RS10285 PF00849 RNA pseudouridylate synthase IR188_RS10290 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) IR188_RS10300 PF02777 Iron/manganese superoxide dismutases, C-terminal domain IR188_RS10300 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain IR188_RS10310 PF00356 Bacterial regulatory proteins, lacI family IR188_RS10315 PF03466 LysR substrate binding domain IR188_RS10315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IR188_RS10320 PF07690 Major Facilitator Superfamily IR188_RS10330 PF00677 Lumazine binding domain IR188_RS10335 PF01554 MatE IR188_RS10350 PF02887 Pyruvate kinase, alpha/beta domain IR188_RS10350 PF00224 Pyruvate kinase, barrel domain IR188_RS10355 PF04728 Lipoprotein leucine-zipper IR188_RS10360 PF17969 L,D-transpeptidase C-terminal domain IR188_RS10360 PF03734 L,D-transpeptidase catalytic domain IR188_RS10360 PF01476 LysM domain IR188_RS10365 PF02657 Fe-S metabolism associated domain IR188_RS10370 PF00266 Aminotransferase class-V IR188_RS10375 PF01458 Uncharacterized protein family (UPF0051) IR188_RS10380 PF00005 ABC transporter IR188_RS10385 PF01458 Uncharacterized protein family (UPF0051) IR188_RS10390 PF01521 Iron-sulphur cluster biosynthesis IR188_RS10395 PF03061 Thioesterase superfamily IR188_RS10400 PF13183 4Fe-4S dicluster domain IR188_RS10400 PF02913 FAD linked oxidases, C-terminal domain IR188_RS10400 PF01565 FAD binding domain IR188_RS10405 PF01594 AI-2E family transporter IR188_RS10410 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain IR188_RS10410 PF00391 PEP-utilising enzyme, mobile domain IR188_RS10410 PF02896 PEP-utilising enzyme, TIM barrel domain IR188_RS10415 PF03618 Kinase/pyrophosphorylase IR188_RS10420 PF00793 DAHP synthetase I family IR188_RS10425 PF10636 Hemin uptake protein hemP IR188_RS10430 PF05171 Haemin-degrading HemS.ChuX domain IR188_RS10435 PF01497 Periplasmic binding protein IR188_RS10440 PF01032 FecCD transport family IR188_RS10445 PF00005 ABC transporter IR188_RS10455 PF12833 Helix-turn-helix domain IR188_RS10460 PF00080 Copper/zinc superoxide dismutase (SODC) IR188_RS10465 PF10437 Bacterial lipoate protein ligase C-terminus IR188_RS10465 PF03099 Biotin/lipoate A/B protein ligase family IR188_RS10470 PF00877 NlpC/P60 family IR188_RS10475 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase IR188_RS10480 PF00892 EamA-like transporter family IR188_RS10485 PF00892 EamA-like transporter family IR188_RS10490 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase IR188_RS10495 PF01522 Polysaccharide deacetylase IR188_RS10500 PF01370 NAD dependent epimerase/dehydratase family IR188_RS10500 PF02911 Formyl transferase, C-terminal domain IR188_RS10500 PF00551 Formyl transferase IR188_RS10505 PF00535 Glycosyl transferase family 2 IR188_RS10510 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family IR188_RS10515 PF00005 ABC transporter IR188_RS10520 PF01032 FecCD transport family IR188_RS10525 PF00216 Bacterial DNA-binding protein IR188_RS10530 PF03147 Ferredoxin-fold anticodon binding domain IR188_RS10530 PF03483 B3/4 domain IR188_RS10530 PF01588 Putative tRNA binding domain IR188_RS10530 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain IR188_RS10530 PF03484 tRNA synthetase B5 domain IR188_RS10535 PF01409 tRNA synthetases class II core domain (F) IR188_RS10535 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain IR188_RS10545 PF00453 Ribosomal protein L20 IR188_RS10550 PF01632 Ribosomal protein L35 IR188_RS10555 PF00707 Translation initiation factor IF-3, C-terminal domain IR188_RS10555 PF05198 Translation initiation factor IF-3, N-terminal domain IR188_RS10560 PF03129 Anticodon binding domain IR188_RS10560 PF02824 TGS domain IR188_RS10560 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IR188_RS10560 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IR188_RS10565 PF00884 Sulfatase IR188_RS10570 PF01464 Transglycosylase SLT domain IR188_RS10575 PF01297 Zinc-uptake complex component A periplasmic IR188_RS10580 PF00005 ABC transporter IR188_RS10585 PF00950 ABC 3 transport family IR188_RS10590 PF00950 ABC 3 transport family IR188_RS10595 PF03881 Fructosamine kinase IR188_RS10600 PF14002 YniB-like protein IR188_RS10605 PF13419 Haloacid dehalogenase-like hydrolase IR188_RS10610 PF04307 LexA-binding, inner membrane-associated putative hydrolase IR188_RS10615 PF00375 Sodium:dicarboxylate symporter family IR188_RS10620 PF01435 Peptidase family M48 IR188_RS10625 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IR188_RS10630 PF03949 Malic enzyme, NAD binding domain IR188_RS10630 PF00390 Malic enzyme, N-terminal domain IR188_RS10630 PF01515 Phosphate acetyl/butaryl transferase IR188_RS10635 PF00196 Bacterial regulatory proteins, luxR family IR188_RS10635 PF00072 Response regulator receiver domain IR188_RS10645 PF03960 ArsC family IR188_RS10650 PF01546 Peptidase family M20/M25/M40 IR188_RS10650 PF07687 Peptidase dimerisation domain IR188_RS10655 PF02557 D-alanyl-D-alanine carboxypeptidase IR188_RS10660 PF04304 Protein of unknown function (DUF454) IR188_RS10665 PF00205 Thiamine pyrophosphate enzyme, central domain IR188_RS10665 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IR188_RS10665 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IR188_RS10670 PF13980 Uncharacterised protein family (UPF0370) IR188_RS10675 PF13718 GNAT acetyltransferase 2 IR188_RS10675 PF05127 Helicase IR188_RS10675 PF08351 Domain of unknown function (DUF1726) IR188_RS10675 PF17176 tRNA-binding domain IR188_RS10680 PF04284 Protein of unknown function (DUF441) IR188_RS10685 PF04228 Putative neutral zinc metallopeptidase IR188_RS10690 PF01259 SAICAR synthetase IR188_RS10695 PF00455 DeoR C terminal sensor domain IR188_RS10695 PF08220 DeoR-like helix-turn-helix domain IR188_RS10700 PF00459 Inositol monophosphatase family IR188_RS10705 PF07690 Major Facilitator Superfamily IR188_RS10710 PF00535 Glycosyl transferase family 2 IR188_RS10715 PF06804 NlpB/DapX lipoprotein IR188_RS10720 PF00701 Dihydrodipicolinate synthetase family IR188_RS10725 PF01842 ACT domain IR188_RS10730 PF00578 AhpC/TSA family IR188_RS10735 PF05860 haemagglutination activity domain IR188_RS10735 PF05594 Haemagluttinin repeat IR188_RS10735 PF13332 Hemagglutinin repeat IR188_RS10735 PF15526 Novel toxin 21 IR188_RS10735 PF04829 Pre-toxin domain with VENN motif IR188_RS10740 PF01594 AI-2E family transporter IR188_RS10745 PF01435 Peptidase family M48 IR188_RS10745 PF07720 Tetratricopeptide repeat IR188_RS10750 PF03960 ArsC family IR188_RS10755 PF07262 CDI immunity protein IR188_RS10770 PF05860 haemagglutination activity domain IR188_RS10770 PF13332 Hemagglutinin repeat IR188_RS10770 PF05594 Haemagluttinin repeat IR188_RS10770 PF04829 Pre-toxin domain with VENN motif IR188_RS10775 PF01066 CDP-alcohol phosphatidyltransferase IR188_RS10780 PF12146 Serine aminopeptidase, S33 IR188_RS10780 PF12147 Putative methyltransferase IR188_RS10785 PF00782 Dual specificity phosphatase, catalytic domain IR188_RS10795 PF00308 Bacterial dnaA protein IR188_RS10800 PF00860 Permease family IR188_RS10810 PF02769 AIR synthase related protein, C-terminal domain IR188_RS10810 PF00586 AIR synthase related protein, N-terminal domain IR188_RS10815 PF00551 Formyl transferase IR188_RS10825 PF13302 Acetyltransferase (GNAT) domain IR188_RS10830 PF02503 Polyphosphate kinase middle domain IR188_RS10830 PF13089 Polyphosphate kinase N-terminal domain IR188_RS10830 PF13090 Polyphosphate kinase C-terminal domain 2 IR188_RS10830 PF17941 Polyphosphate kinase C-terminal domain 1 IR188_RS10835 PF02541 Ppx/GppA phosphatase family IR188_RS10840 PF03448 MgtE intracellular N domain IR188_RS10840 PF01769 Divalent cation transporter IR188_RS10840 PF00571 CBS domain IR188_RS10845 PF07690 Major Facilitator Superfamily IR188_RS10855 PF01569 PAP2 superfamily IR188_RS10865 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IR188_RS10870 PF00873 AcrB/AcrD/AcrF family IR188_RS10875 PF00873 AcrB/AcrD/AcrF family IR188_RS10880 PF00512 His Kinase A (phospho-acceptor) domain IR188_RS10880 PF00672 HAMP domain IR188_RS10880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IR188_RS10885 PF00072 Response regulator receiver domain IR188_RS10885 PF00486 Transcriptional regulatory protein, C terminal IR188_RS10895 PF16325 Peptidase family U32 C-terminal domain IR188_RS10895 PF01136 Peptidase family U32 IR188_RS10900 PF00781 Diacylglycerol kinase catalytic domain IR188_RS10905 PF01791 DeoC/LacD family aldolase IR188_RS10910 PF01479 S4 domain IR188_RS10910 PF00849 RNA pseudouridylate synthase IR188_RS10915 PF08543 Phosphomethylpyrimidine kinase IR188_RS10920 PF00313 'Cold-shock' DNA-binding domain IR188_RS10925 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP IR188_RS10930 PF00324 Amino acid permease IR188_RS10940 PF12833 Helix-turn-helix domain IR188_RS10950 PF05525 Branched-chain amino acid transport protein IR188_RS10955 PF01510 N-acetylmuramoyl-L-alanine amidase IR188_RS10965 PF00132 Bacterial transferase hexapeptide (six repeats) IR188_RS10970 PF01235 Sodium:alanine symporter family IR188_RS10975 PF10753 Toxin GhoT_OrtT IR188_RS10990 PF01184 GPR1/FUN34/yaaH family IR188_RS10995 PF07437 YfaZ precursor IR188_RS11000 PF00199 Catalase IR188_RS11000 PF06628 Catalase-related immune-responsive IR188_RS11005 PF00501 AMP-binding enzyme IR188_RS11005 PF13193 AMP-binding enzyme C-terminal domain IR188_RS11010 PF13378 Enolase C-terminal domain-like IR188_RS11015 PF00378 Enoyl-CoA hydratase/isomerase IR188_RS11020 PF12697 Alpha/beta hydrolase family IR188_RS11025 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IR188_RS11025 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IR188_RS11025 PF16582 Middle domain of thiamine pyrophosphate IR188_RS11030 PF00425 chorismate binding enzyme IR188_RS11045 PF00361 Proton-conducting membrane transporter IR188_RS11050 PF00361 Proton-conducting membrane transporter IR188_RS11055 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus IR188_RS11055 PF00361 Proton-conducting membrane transporter IR188_RS11060 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L IR188_RS11065 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 IR188_RS11070 PF12838 4Fe-4S dicluster domain IR188_RS11075 PF00146 NADH dehydrogenase IR188_RS11080 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region IR188_RS11080 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IR188_RS11080 PF00384 Molybdopterin oxidoreductase IR188_RS11080 PF01568 Molydopterin dinucleotide binding domain IR188_RS11085 PF10531 SLBB domain IR188_RS11085 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region IR188_RS11085 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit IR188_RS11095 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit IR188_RS11095 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit IR188_RS11100 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit IR188_RS11105 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 IR188_RS11110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IR188_RS11110 PF03466 LysR substrate binding domain IR188_RS11115 PF00155 Aminotransferase class I and II IR188_RS11125 PF03600 Citrate transporter IR188_RS11125 PF02080 TrkA-C domain IR188_RS11130 PF13419 Haloacid dehalogenase-like hydrolase IR188_RS11135 PF03887 YfbU domain IR188_RS11140 PF04217 Protein of unknown function, DUF412 IR188_RS11145 PF00871 Acetokinase family IR188_RS11150 PF01515 Phosphate acetyl/butaryl transferase IR188_RS11150 PF07085 DRTGG domain IR188_RS11160 PF00293 NUDIX domain IR188_RS11165 PF01370 NAD dependent epimerase/dehydratase family IR188_RS11165 PF08338 Domain of unknown function (DUF1731) IR188_RS11170 PF02441 Flavoprotein IR188_RS11175 PF00156 Phosphoribosyl transferase domain IR188_RS11180 PF02674 Colicin V production protein IR188_RS11185 PF05036 Sporulation related domain IR188_RS11190 PF08245 Mur ligase middle domain IR188_RS11190 PF02875 Mur ligase family, glutamate ligase domain IR188_RS11195 PF17848 Acetyl-coA carboxylase zinc finger domain IR188_RS11195 PF01039 Carboxyl transferase domain IR188_RS11200 PF09335 SNARE associated Golgi protein IR188_RS11205 PF01416 tRNA pseudouridine synthase IR188_RS11210 PF01118 Semialdehyde dehydrogenase, NAD binding domain IR188_RS11210 PF02774 Semialdehyde dehydrogenase, dimerisation domain IR188_RS11215 PF11890 Domain of unknown function (DUF3410) IR188_RS11215 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IR188_RS11215 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IR188_RS11225 PF00892 EamA-like transporter family IR188_RS11230 PF01024 Colicin pore forming domain IR188_RS11230 PF11504 Colicin Ia IR188_RS11245 PF02801 Beta-ketoacyl synthase, C-terminal domain IR188_RS11245 PF00109 Beta-ketoacyl synthase, N-terminal domain IR188_RS11250 PF01266 FAD dependent oxidoreductase IR188_RS11250 PF05430 S-adenosyl-L-methionine-dependent methyltransferase IR188_RS11255 PF04960 Glutaminase IR188_RS11265 PF00583 Acetyltransferase (GNAT) family IR188_RS11270 PF08891 YfcL protein IR188_RS11275 PF04315 Elongation factor P hydroxylase IR188_RS11280 PF01925 Sulfite exporter TauE/SafE IR188_RS11285 PF01264 Chorismate synthase IR188_RS11290 PF05175 Methyltransferase small domain IR188_RS11295 PF01713 Smr domain IR188_RS11300 PF00300 Histidine phosphatase superfamily (branch 1) IR188_RS11305 PF00378 Enoyl-CoA hydratase/isomerase IR188_RS11305 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IR188_RS11305 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IR188_RS11310 PF00108 Thiolase, N-terminal domain IR188_RS11310 PF02803 Thiolase, C-terminal domain IR188_RS11315 PF04175 Protein of unknown function (DUF406) IR188_RS11320 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) IR188_RS11325 PF04333 MlaA lipoprotein IR188_RS11330 PF14748 Pyrroline-5-carboxylate reductase dimerisation IR188_RS11330 PF03807 NADP oxidoreductase coenzyme F420-dependent IR188_RS11335 PF00291 Pyridoxal-phosphate dependent enzyme IR188_RS11340 PF02447 GntP family permease IR188_RS11345 PF03466 LysR substrate binding domain IR188_RS11345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IR188_RS11355 PF00589 Phage integrase family IR188_RS11355 PF14659 Phage integrase, N-terminal SAM-like domain IR188_RS11355 PF13356 Arm DNA-binding domain IR188_RS11360 PF06440 DNA polymerase III, theta subunit IR188_RS11430 PF03869 Arc-like DNA binding domain IR188_RS11525 PF10549 ORF11CD3 domain IR188_RS11525 PF09669 Phage regulatory protein Rha (Phage_pRha) IR188_RS11595 PF01695 IstB-like ATP binding protein IR188_RS11620 PF01381 Helix-turn-helix IR188_RS11620 PF00717 Peptidase S24-like IR188_RS11640 PF12684 PDDEXK-like domain of unknown function (DUF3799) IR188_RS11640 PF06630 Enterobacterial exodeoxyribonuclease VIII IR188_RS11645 PF03837 RecT family IR188_RS11710 PF00959 Phage lysozyme IR188_RS11720 PF00717 Peptidase S24-like IR188_RS11720 PF01381 Helix-turn-helix IR188_RS11735 PF03180 NLPA lipoprotein IR188_RS11745 PF01321 Creatinase/Prolidase N-terminal domain IR188_RS11745 PF00557 Metallopeptidase family M24 IR188_RS11765 PF07411 Domain of unknown function (DUF1508) IR188_RS11775 PF04325 Protein of unknown function (DUF465) IR188_RS11800 PF01497 Periplasmic binding protein IR188_RS11805 PF04237 YjbR IR188_RS11810 PF01381 Helix-turn-helix IR188_RS11815 PF05368 NmrA-like family IR188_RS11820 PF01638 HxlR-like helix-turn-helix IR188_RS11825 PF00589 Phage integrase family IR188_RS11825 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain IR188_RS11835 PF00180 Isocitrate/isopropylmalate dehydrogenase IR188_RS11840 PF00849 RNA pseudouridylate synthase IR188_RS11845 PF00293 NUDIX domain IR188_RS11855 PF04356 Protein of unknown function (DUF489) IR188_RS11860 PF08328 Adenylosuccinate lyase C-terminal IR188_RS11860 PF00206 Lyase IR188_RS11865 PF00486 Transcriptional regulatory protein, C terminal IR188_RS11865 PF00072 Response regulator receiver domain IR188_RS11870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IR188_RS11870 PF08918 PhoQ Sensor IR188_RS11875 PF08007 Cupin superfamily protein IR188_RS11885 PF13954 PapC N-terminal domain IR188_RS11885 PF00577 Outer membrane usher protein IR188_RS11885 PF13953 PapC C-terminal domain IR188_RS11890 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain IR188_RS11890 PF02753 Pili assembly chaperone PapD, C-terminal domain IR188_RS11900 PF01546 Peptidase family M20/M25/M40 IR188_RS11900 PF07687 Peptidase dimerisation domain IR188_RS11905 PF02146 Sir2 family IR188_RS11910 PF12704 MacB-like periplasmic core domain IR188_RS11910 PF02687 FtsX-like permease family IR188_RS11915 PF00005 ABC transporter IR188_RS11920 PF12704 MacB-like periplasmic core domain IR188_RS11920 PF02687 FtsX-like permease family IR188_RS11925 PF02559 CarD-like/TRCF domain IR188_RS11925 PF00270 DEAD/DEAH box helicase IR188_RS11925 PF17757 UvrB interaction domain IR188_RS11925 PF03461 TRCF domain IR188_RS11925 PF00271 Helicase conserved C-terminal domain IR188_RS11930 PF00155 Aminotransferase class I and II IR188_RS11945 PF07992 Pyridine nucleotide-disulphide oxidoreductase IR188_RS11950 PF05728 Uncharacterised protein family (UPF0227) IR188_RS11955 PF00933 Glycosyl hydrolase family 3 N terminal domain IR188_RS11960 PF01636 Phosphotransferase enzyme family IR188_RS11965 PF13036 Peptidoglycan-synthase activator LpoB IR188_RS11970 PF01230 HIT domain IR188_RS11975 PF01026 TatD related DNase IR188_RS11980 PF09115 DNA polymerase III, delta subunit, C terminal IR188_RS11985 PF02223 Thymidylate kinase IR188_RS11990 PF02618 YceG-like family IR188_RS11995 PF01063 Amino-transferase class IV IR188_RS12000 PF02801 Beta-ketoacyl synthase, C-terminal domain IR188_RS12000 PF00109 Beta-ketoacyl synthase, N-terminal domain IR188_RS12005 PF00550 Phosphopantetheine attachment site IR188_RS12015 PF00698 Acyl transferase domain IR188_RS12020 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal IR188_RS12020 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IR188_RS12025 PF02504 Fatty acid synthesis protein IR188_RS12030 PF01783 Ribosomal L32p protein family IR188_RS12035 PF02620 Large ribosomal RNA subunit accumulation protein YceD IR188_RS12040 PF02545 Maf-like protein IR188_RS12050 PF01479 S4 domain IR188_RS12050 PF00849 RNA pseudouridylate synthase IR188_RS12055 PF10150 Ribonuclease E/G family IR188_RS12055 PF00575 S1 RNA binding domain IR188_RS12055 PF12111 Polyribonucleotide phosphorylase C terminal IR188_RS12060 PF04363 Protein of unknown function (DUF496) IR188_RS12065 PF00929 Exonuclease IR188_RS12065 PF08411 Exonuclease C-terminal IR188_RS12075 PF09330 D-lactate dehydrogenase, membrane binding IR188_RS12075 PF01565 FAD binding domain IR188_RS12080 PF01925 Sulfite exporter TauE/SafE IR188_RS12085 PF13520 Amino acid permease IR188_RS12090 PF00593 TonB dependent receptor IR188_RS12090 PF07715 TonB-dependent Receptor Plug Domain IR188_RS12095 PF00005 ABC transporter IR188_RS12100 PF01032 FecCD transport family IR188_RS12110 PF00324 Amino acid permease IR188_RS12115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IR188_RS12115 PF03466 LysR substrate binding domain IR188_RS12120 PF03601 Conserved hypothetical protein 698 IR188_RS12125 PF01261 Xylose isomerase-like TIM barrel IR188_RS12130 PF00294 pfkB family carbohydrate kinase IR188_RS12135 PF00293 NUDIX domain IR188_RS12140 PF03222 Tryptophan/tyrosine permease family IR188_RS12145 PF09285 Elongation factor P, C-terminal IR188_RS12145 PF08207 Elongation factor P (EF-P) KOW-like domain IR188_RS12145 PF01132 Elongation factor P (EF-P) OB domain IR188_RS12160 PF01569 PAP2 superfamily IR188_RS12165 PF00877 NlpC/P60 family IR188_RS12175 PF07690 Major Facilitator Superfamily IR188_RS12180 PF00849 RNA pseudouridylate synthase IR188_RS12180 PF01479 S4 domain IR188_RS12185 PF00271 Helicase conserved C-terminal domain IR188_RS12185 PF04851 Type III restriction enzyme, res subunit IR188_RS12190 PF01386 Ribosomal L25p family IR188_RS12195 PF04245 37-kD nucleoid-associated bacterial protein IR188_RS12200 PF07208 Protein of unknown function (DUF1414) IR188_RS12205 PF00884 Sulfatase IR188_RS12205 PF11893 Domain of unknown function (DUF3413) IR188_RS12215 PF00313 'Cold-shock' DNA-binding domain IR188_RS12220 PF11922 Domain of unknown function (DUF3440) IR188_RS12220 PF01507 Phosphoadenosine phosphosulfate reductase family IR188_RS12225 PF02195 ParB-like nuclease domain IR188_RS12235 PF01925 Sulfite exporter TauE/SafE IR188_RS12245 PF09335 SNARE associated Golgi protein IR188_RS12250 PF08241 Methyltransferase domain IR188_RS12255 PF00313 'Cold-shock' DNA-binding domain IR188_RS12260 PF03824 High-affinity nickel-transport protein IR188_RS12265 PF02583 Metal-sensitive transcriptional repressor IR188_RS12275 PF07690 Major Facilitator Superfamily IR188_RS12280 PF00891 O-methyltransferase domain IR188_RS12285 PF02310 B12 binding domain IR188_RS12285 PF04055 Radical SAM superfamily IR188_RS12305 PF04055 Radical SAM superfamily IR188_RS12305 PF02310 B12 binding domain IR188_RS12310 PF02310 B12 binding domain IR188_RS12310 PF04055 Radical SAM superfamily IR188_RS12320 PF04055 Radical SAM superfamily IR188_RS12350 PF09615 CRISPR-associated protein (Cas_Csy3) IR188_RS12355 PF09614 CRISPR-associated protein (Cas_Csy2) IR188_RS12360 PF09611 CRISPR-associated protein (Cas_Csy1) IR188_RS12390 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) IR188_RS12495 PF04233 Phage Mu protein F like protein IR188_RS12530 PF00959 Phage lysozyme IR188_RS12540 PF08349 Protein of unknown function (DUF1722) IR188_RS12595 PF03354 Phage Terminase IR188_RS12615 PF01381 Helix-turn-helix IR188_RS12615 PF00717 Peptidase S24-like IR188_RS12685 PF01066 CDP-alcohol phosphatidyltransferase IR188_RS12690 PF01541 GIY-YIG catalytic domain IR188_RS12690 PF08459 UvrC Helix-hairpin-helix N-terminal IR188_RS12690 PF02151 UvrB/uvrC motif IR188_RS12695 PF00196 Bacterial regulatory proteins, luxR family IR188_RS12695 PF00072 Response regulator receiver domain IR188_RS12700 PF00881 Nitroreductase family IR188_RS12705 PF03222 Tryptophan/tyrosine permease family IR188_RS12710 PF00291 Pyridoxal-phosphate dependent enzyme IR188_RS12720 PF04261 Dyp-type peroxidase family IR188_RS12725 PF13473 Cupredoxin-like domain IR188_RS12725 PF09375 Imelysin IR188_RS12735 PF13473 Cupredoxin-like domain IR188_RS12740 PF10634 Fe2+ transport protein IR188_RS12745 PF01965 DJ-1/PfpI family IR188_RS12755 PF10688 Bacterial inner membrane protein IR188_RS12805 PF00749 tRNA synthetases class I (E and Q), catalytic domain IR188_RS12830 PF12843 Putative quorum-sensing-regulated virulence factor IR188_RS12835 PF03119 NAD-dependent DNA ligase C4 zinc finger domain IR188_RS12835 PF03120 NAD-dependent DNA ligase OB-fold domain IR188_RS12835 PF12826 Helix-hairpin-helix motif IR188_RS12835 PF00533 BRCA1 C Terminus (BRCT) domain IR188_RS12835 PF01653 NAD-dependent DNA ligase adenylation domain IR188_RS12840 PF04354 ZipA, C-terminal FtsZ-binding domain IR188_RS12850 PF00291 Pyridoxal-phosphate dependent enzyme IR188_RS12855 PF00381 PTS HPr component phosphorylation site IR188_RS12860 PF00391 PEP-utilising enzyme, mobile domain IR188_RS12860 PF05524 PEP-utilising enzyme, N-terminal IR188_RS12860 PF02896 PEP-utilising enzyme, TIM barrel domain IR188_RS12865 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 IR188_RS12875 PF00582 Universal stress protein family IR188_RS12890 PF03594 Benzoate membrane transport protein IR188_RS12895 PF07883 Cupin domain IR188_RS12895 PF01381 Helix-turn-helix IR188_RS12900 PF00302 Chloramphenicol acetyltransferase IR188_RS12915 PF00561 alpha/beta hydrolase fold IR188_RS12920 PF00440 Bacterial regulatory proteins, tetR family IR188_RS12930 PF06440 DNA polymerase III, theta subunit IR188_RS12935 PF04138 GtrA-like protein IR188_RS12940 PF00535 Glycosyl transferase family 2 IR188_RS13055 PF10668 Phage terminase small subunit IR188_RS13055 PF03592 Terminase small subunit IR188_RS13110 PF07102 Protein of unknown function (DUF1364) IR188_RS13175 PF01381 Helix-turn-helix IR188_RS13175 PF00717 Peptidase S24-like IR188_RS13235 PF05063 MT-A70 IR188_RS13240 PF00589 Phage integrase family IR188_RS13250 PF01212 Beta-eliminating lyase IR188_RS13255 PF03222 Tryptophan/tyrosine permease family IR188_RS13265 PF07670 Nucleoside recognition IR188_RS13265 PF07662 Na+ dependent nucleoside transporter C-terminus IR188_RS13265 PF01773 Na+ dependent nucleoside transporter N-terminus IR188_RS13270 PF01048 Phosphorylase superfamily IR188_RS13285 PF07690 Major Facilitator Superfamily IR188_RS13295 PF00593 TonB dependent receptor IR188_RS13295 PF07715 TonB-dependent Receptor Plug Domain IR188_RS13300 PF00356 Bacterial regulatory proteins, lacI family IR188_RS13305 PF01588 Putative tRNA binding domain IR188_RS13310 PF01263 Aldose 1-epimerase IR188_RS13315 PF08544 GHMP kinases C terminal IR188_RS13315 PF10509 Galactokinase galactose-binding signature IR188_RS13315 PF00288 GHMP kinases N terminal domain IR188_RS13320 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain IR188_RS13320 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain IR188_RS13325 PF16363 GDP-mannose 4,6 dehydratase IR188_RS13330 PF00356 Bacterial regulatory proteins, lacI family IR188_RS13335 PF16353 Domain of unknown function(DUF4981) IR188_RS13335 PF00703 Glycosyl hydrolases family 2 IR188_RS13335 PF02929 Beta galactosidase small chain IR188_RS13335 PF02836 Glycosyl hydrolases family 2, TIM barrel domain IR188_RS13335 PF02837 Glycosyl hydrolases family 2, sugar binding domain IR188_RS13340 PF04074 YhcH/YjgK/YiaL IR188_RS13345 PF13520 Amino acid permease IR188_RS13355 PF00860 Permease family IR188_RS13360 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IR188_RS13360 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IR188_RS13375 PF16916 Dimerisation domain of Zinc Transporter IR188_RS13375 PF01545 Cation efflux family IR188_RS13380 PF00582 Universal stress protein family IR188_RS13385 PF06146 Phosphate-starvation-inducible E IR188_RS13390 PF03974 Ecotin IR188_RS13395 PF04325 Protein of unknown function (DUF465) IR188_RS13400 PF10678 Protein of unknown function (DUF2492) IR188_RS13410 PF11756 Nitrous oxide-stimulated promoter IR188_RS13415 PF13302 Acetyltransferase (GNAT) domain IR188_RS13425 PF00005 ABC transporter IR188_RS13430 PF00528 Binding-protein-dependent transport system inner membrane component IR188_RS13440 PF12833 Helix-turn-helix domain IR188_RS13455 PF04199 Putative cyclase IR188_RS13470 PF03466 LysR substrate binding domain IR188_RS13470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IR188_RS13490 PF01022 Bacterial regulatory protein, arsR family IR188_RS13505 PF16925 Tetracyclin repressor-like, C-terminal domain IR188_RS13505 PF00440 Bacterial regulatory proteins, tetR family IR188_RS13510 PF13520 Amino acid permease IR188_RS13515 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain IR188_RS13515 PF01276 Orn/Lys/Arg decarboxylase, major domain IR188_RS13515 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain IR188_RS13520 PF10940 Protein of unknown function (DUF2618) IR188_RS13530 PF01336 OB-fold nucleic acid binding domain IR188_RS13530 PF00152 tRNA synthetases class II (D, K and N) IR188_RS13540 PF02272 DHHA1 domain IR188_RS13540 PF01368 DHH family IR188_RS13540 PF17768 RecJ OB domain IR188_RS13545 PF13098 Thioredoxin-like domain IR188_RS13545 PF10411 Disulfide bond isomerase protein N-terminus IR188_RS13550 PF02899 Phage integrase, N-terminal SAM-like domain IR188_RS13550 PF00589 Phage integrase family IR188_RS13555 PF00258 Flavodoxin IR188_RS13565 PF03937 Flavinator of succinate dehydrogenase IR188_RS13570 PF01571 Aminomethyltransferase folate-binding domain IR188_RS13580 PF02347 Glycine cleavage system P-protein IR188_RS13585 PF01597 Glycine cleavage H-protein IR188_RS13590 PF08669 Glycine cleavage T-protein C-terminal barrel domain IR188_RS13590 PF01571 Aminomethyltransferase folate-binding domain IR188_RS13595 PF01494 FAD binding domain IR188_RS13600 PF01494 FAD binding domain IR188_RS13605 PF00557 Metallopeptidase family M24 IR188_RS13605 PF05195 Aminopeptidase P, N-terminal domain IR188_RS13610 PF03695 Uncharacterised protein family (UPF0149) IR188_RS13615 PF05164 Cell division protein ZapA IR188_RS13625 PF01812 5-formyltetrahydrofolate cyclo-ligase family IR188_RS13630 PF01842 ACT domain IR188_RS13630 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IR188_RS13630 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IR188_RS13635 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) IR188_RS13640 PF03466 LysR substrate binding domain IR188_RS13640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IR188_RS13645 PF04402 Protein of unknown function (DUF541) IR188_RS13650 PF01810 LysE type translocator IR188_RS13660 PF00924 Mechanosensitive ion channel IR188_RS13660 PF05552 Conserved TM helix IR188_RS13665 PF06062 Uncharacterised protein family (UPF0231) IR188_RS13670 PF00330 Aconitase family (aconitate hydratase) IR188_RS13670 PF06434 Aconitate hydratase 2 N-terminus IR188_RS13670 PF11791 Aconitate B N-terminal domain IR188_RS13675 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IR188_RS13675 PF07992 Pyridine nucleotide-disulphide oxidoreductase IR188_RS13680 PF02817 e3 binding domain IR188_RS13680 PF00364 Biotin-requiring enzyme IR188_RS13680 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IR188_RS13685 PF17831 Pyruvate dehydrogenase E1 component middle domain IR188_RS13685 PF00456 Transketolase, thiamine diphosphate binding domain IR188_RS13690 PF00392 Bacterial regulatory proteins, gntR family IR188_RS13690 PF07729 FCD domain IR188_RS13695 PF01510 N-acetylmuramoyl-L-alanine amidase IR188_RS13700 PF07963 Prokaryotic N-terminal methylation motif IR188_RS13705 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain IR188_RS13705 PF00437 Type II/IV secretion system protein IR188_RS13710 PF00482 Type II secretion system (T2SS), protein F IR188_RS13715 PF01121 Dephospho-CoA kinase IR188_RS13720 PF07072 Cell division protein IR188_RS13725 PF03884 DNA gyrase inhibitor YacG IR188_RS13730 PF00293 NUDIX domain IR188_RS13735 PF01043 SecA preprotein cross-linking domain IR188_RS13735 PF07517 SecA DEAD-like domain IR188_RS13735 PF02810 SEC-C motif IR188_RS13735 PF07516 SecA Wing and Scaffold domain IR188_RS13740 PF06558 Secretion monitor precursor protein (SecM) IR188_RS13750 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase IR188_RS13755 PF12327 FtsZ family, C-terminal domain IR188_RS13755 PF00091 Tubulin/FtsZ family, GTPase domain IR188_RS13760 PF02491 SHS2 domain inserted in FTSA IR188_RS13765 PF03799 Cell division protein FtsQ IR188_RS13765 PF08478 POTRA domain, FtsQ-type IR188_RS13770 PF01820 D-ala D-ala ligase N-terminus IR188_RS13770 PF07478 D-ala D-ala ligase C-terminus IR188_RS13775 PF08245 Mur ligase middle domain IR188_RS13775 PF02875 Mur ligase family, glutamate ligase domain IR188_RS13775 PF01225 Mur ligase family, catalytic domain IR188_RS13780 PF04101 Glycosyltransferase family 28 C-terminal domain IR188_RS13780 PF03033 Glycosyltransferase family 28 N-terminal domain IR188_RS13785 PF01098 Cell cycle protein IR188_RS13790 PF08245 Mur ligase middle domain IR188_RS13790 PF02875 Mur ligase family, glutamate ligase domain IR188_RS13795 PF00953 Glycosyl transferase family 4 IR188_RS13795 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 IR188_RS13800 PF01225 Mur ligase family, catalytic domain IR188_RS13800 PF02875 Mur ligase family, glutamate ligase domain IR188_RS13800 PF08245 Mur ligase middle domain IR188_RS13805 PF08245 Mur ligase middle domain IR188_RS13805 PF01225 Mur ligase family, catalytic domain IR188_RS13805 PF02875 Mur ligase family, glutamate ligase domain IR188_RS13810 PF00905 Penicillin binding protein transpeptidase domain IR188_RS13810 PF03717 Penicillin-binding Protein dimerisation domain IR188_RS13815 PF04999 Cell division protein FtsL IR188_RS13820 PF01795 MraW methylase family IR188_RS13825 PF02381 MraZ protein, putative antitoxin-like IR188_RS13830 PF00356 Bacterial regulatory proteins, lacI family IR188_RS13830 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family IR188_RS13835 PF10369 Small subunit of acetolactate synthase IR188_RS13840 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IR188_RS13840 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IR188_RS13840 PF00205 Thiamine pyrophosphate enzyme, central domain IR188_RS13845 PF00501 AMP-binding enzyme IR188_RS13850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IR188_RS13850 PF03466 LysR substrate binding domain IR188_RS13855 PF00682 HMGL-like IR188_RS13855 PF08502 LeuA allosteric (dimerisation) domain IR188_RS13860 PF00180 Isocitrate/isopropylmalate dehydrogenase IR188_RS13865 PF00330 Aconitase family (aconitate hydratase) IR188_RS13870 PF00694 Aconitase C-terminal domain IR188_RS13875 PF12793 Sugar transport-related sRNA regulator N-term IR188_RS13875 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IR188_RS13880 PF02976 DNA mismatch repair enzyme MutH IR188_RS13885 PF00328 Histidine phosphatase superfamily (branch 2) IR188_RS13900 PF12241 Trans-2-enoyl-CoA reductase catalytic region IR188_RS13900 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase IR188_RS13900 PF07055 Enoyl reductase FAD binding domain IR188_RS13915 PF00155 Aminotransferase class I and II IR188_RS13915 PF00392 Bacterial regulatory proteins, gntR family IR188_RS13920 PF02678 Pirin IR188_RS13920 PF05726 Pirin C-terminal cupin domain IR188_RS13925 PF02661 Fic/DOC family IR188_RS13930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IR188_RS13930 PF03466 LysR substrate binding domain IR188_RS13935 PF00106 short chain dehydrogenase IR188_RS13940 PF00356 Bacterial regulatory proteins, lacI family IR188_RS13945 PF13407 Periplasmic binding protein domain IR188_RS13950 PF00005 ABC transporter IR188_RS13955 PF02653 Branched-chain amino acid transport system / permease component IR188_RS13960 PF00491 Arginase family IR188_RS13965 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain IR188_RS13965 PF17944 Arginine decarboxylase C-terminal helical extension IR188_RS13965 PF17810 Arginine decarboxylase helical bundle domain IR188_RS13970 PF00438 S-adenosylmethionine synthetase, N-terminal domain IR188_RS13970 PF02772 S-adenosylmethionine synthetase, central domain IR188_RS13970 PF02773 S-adenosylmethionine synthetase, C-terminal domain IR188_RS13980 PF04143 Sulphur transport IR188_RS13990 PF17283 SprT-like zinc ribbon domain IR188_RS13990 PF10263 SprT-like family IR188_RS13995 PF00571 CBS domain IR188_RS13995 PF03448 MgtE intracellular N domain IR188_RS13995 PF01769 Divalent cation transporter IR188_RS14005 PF00111 2Fe-2S iron-sulfur cluster binding domain IR188_RS14005 PF00175 Oxidoreductase NAD-binding domain IR188_RS14005 PF00970 Oxidoreductase FAD-binding domain IR188_RS14010 PF03063 Prismane/CO dehydrogenase family IR188_RS14015 PF07660 Secretin and TonB N terminus short domain IR188_RS14015 PF07715 TonB-dependent Receptor Plug Domain IR188_RS14015 PF00593 TonB dependent receptor IR188_RS14025 PF01235 Sodium:alanine symporter family IR188_RS14030 PF00654 Voltage gated chloride channel IR188_RS14035 PF03848 Tellurite resistance protein TehB IR188_RS14035 PF09313 Domain of unknown function (DUF1971) IR188_RS14045 PF07690 Major Facilitator Superfamily IR188_RS14050 PF00529 HlyD membrane-fusion protein of T1SS IR188_RS14050 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IR188_RS14060 PF04264 YceI-like domain IR188_RS14065 PF01292 Prokaryotic cytochrome b561 IR188_RS14080 PF01636 Phosphotransferase enzyme family IR188_RS14085 PF01008 Initiation factor 2 subunit family IR188_RS14090 PF00596 Class II Aldolase and Adducin N-terminal domain IR188_RS14100 PF04198 Putative sugar-binding domain IR188_RS14105 PF04055 Radical SAM superfamily IR188_RS14105 PF18693 TRAM domain IR188_RS14105 PF00919 Uncharacterized protein family UPF0004 IR188_RS14110 PF13533 Biotin-lipoyl like IR188_RS14115 PF00005 ABC transporter IR188_RS14125 PF00356 Bacterial regulatory proteins, lacI family IR188_RS14130 PF07385 D-lyxose isomerase IR188_RS14135 PF00107 Zinc-binding dehydrogenase IR188_RS14135 PF08240 Alcohol dehydrogenase GroES-like domain IR188_RS14140 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IR188_RS14140 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IR188_RS14145 PF00005 ABC transporter IR188_RS14150 PF02653 Branched-chain amino acid transport system / permease component IR188_RS14155 PF13407 Periplasmic binding protein domain IR188_RS14160 PF03466 LysR substrate binding domain IR188_RS14160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IR188_RS14165 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IR188_RS14165 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IR188_RS14165 PF00205 Thiamine pyrophosphate enzyme, central domain IR188_RS14170 PF03515 Colicin-like bacteriocin tRNase domain IR188_RS14170 PF11570 Coiled-coil receptor-binding R-domain of colicin E2 IR188_RS14170 PF09000 Cytotoxic IR188_RS14175 PF03513 Cloacin immunity protein IR188_RS14180 PF08220 DeoR-like helix-turn-helix domain IR188_RS14180 PF00455 DeoR C terminal sensor domain IR188_RS14185 PF08013 Tagatose 6 phosphate kinase IR188_RS14190 PF03830 PTS system sorbose subfamily IIB component IR188_RS14195 PF03609 PTS system sorbose-specific iic component IR188_RS14200 PF03613 PTS system mannose/fructose/sorbose family IID component IR188_RS14205 PF03610 PTS system fructose IIA component IR188_RS14210 PF01979 Amidohydrolase family IR188_RS14215 PF01380 SIS domain IR188_RS14220 PF01116 Fructose-bisphosphate aldolase class-II IR188_RS14225 PF00367 phosphotransferase system, EIIB IR188_RS14225 PF02378 Phosphotransferase system, EIIC IR188_RS14230 PF00155 Aminotransferase class I and II IR188_RS14235 PF00860 Permease family IR188_RS14240 PF13247 4Fe-4S dicluster domain IR188_RS14240 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster IR188_RS14240 PF07992 Pyridine nucleotide-disulphide oxidoreductase IR188_RS14245 PF01773 Na+ dependent nucleoside transporter N-terminus IR188_RS14245 PF07662 Na+ dependent nucleoside transporter C-terminus IR188_RS14250 PF04227 Indigoidine synthase A like protein IR188_RS14255 PF00294 pfkB family carbohydrate kinase IR188_RS14260 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment IR188_RS14265 PF00444 Ribosomal protein L36 IR188_RS14270 PF01197 Ribosomal protein L31 IR188_RS14275 PF05257 CHAP domain IR188_RS14275 PF03738 Glutathionylspermidine synthase preATP-grasp IR188_RS14280 PF00860 Permease family IR188_RS14290 PF08240 Alcohol dehydrogenase GroES-like domain IR188_RS14290 PF00107 Zinc-binding dehydrogenase IR188_RS14295 PF05726 Pirin C-terminal cupin domain IR188_RS14295 PF02678 Pirin IR188_RS14300 PF00005 ABC transporter IR188_RS14300 PF03412 Peptidase C39 family IR188_RS14300 PF00664 ABC transporter transmembrane region IR188_RS14305 PF00529 HlyD membrane-fusion protein of T1SS IR188_RS14305 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IR188_RS14325 PF08240 Alcohol dehydrogenase GroES-like domain IR188_RS14325 PF00107 Zinc-binding dehydrogenase IR188_RS14330 PF00440 Bacterial regulatory proteins, tetR family IR188_RS14330 PF16925 Tetracyclin repressor-like, C-terminal domain IR188_RS14335 PF03960 ArsC family IR188_RS14340 PF02040 Arsenical pump membrane protein IR188_RS14345 PF02374 Anion-transporting ATPase IR188_RS14350 PF06953 Arsenical resistance operon trans-acting repressor ArsD IR188_RS14355 PF01022 Bacterial regulatory protein, arsR family IR188_RS14370 PF06183 DinI-like family IR188_RS14375 PF01381 Helix-turn-helix IR188_RS14390 PF03222 Tryptophan/tyrosine permease family IR188_RS14395 PF01212 Beta-eliminating lyase IR188_RS14480 PF04860 Phage portal protein IR188_RS14490 PF03354 Phage Terminase IR188_RS14515 PF00959 Phage lysozyme IR188_RS14530 PF01555 DNA methylase IR188_RS14545 PF06147 Protein of unknown function (DUF968) IR188_RS14595 PF00717 Peptidase S24-like IR188_RS14595 PF01381 Helix-turn-helix IR188_RS14610 PF10065 Uncharacterized conserved protein (DUF2303) IR188_RS14640 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain IR188_RS14640 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain IR188_RS14650 PF01292 Prokaryotic cytochrome b561 IR188_RS14655 PF07361 Cytochrome b562 IR188_RS14660 PF01406 tRNA synthetases class I (C) catalytic domain IR188_RS14660 PF09190 DALR domain IR188_RS14665 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD IR188_RS14670 PF00149 Calcineurin-like phosphoesterase IR188_RS14675 PF00731 AIR carboxylase IR188_RS14680 PF02222 ATP-grasp domain IR188_RS14680 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain IR188_RS14695 PF00005 ABC transporter IR188_RS14700 PF13472 GDSL-like Lipase/Acylhydrolase family IR188_RS14705 PF00106 short chain dehydrogenase IR188_RS14710 PF00085 Thioredoxin IR188_RS14715 PF01145 SPFH domain / Band 7 family IR188_RS14715 PF16200 C-terminal region of band_7 IR188_RS14720 PF01957 NfeD-like C-terminal, partner-binding IR188_RS14725 PF03577 Peptidase family C69 IR188_RS14730 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ IR188_RS14735 PF04221 RelB antitoxin IR188_RS14740 PF05860 haemagglutination activity domain IR188_RS14740 PF13332 Hemagglutinin repeat IR188_RS14745 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB IR188_RS14745 PF08479 POTRA domain, ShlB-type IR188_RS14745 PF17287 POTRA domain IR188_RS14750 PF13411 MerR HTH family regulatory protein IR188_RS14755 PF00403 Heavy-metal-associated domain IR188_RS14760 PF01963 TraB family IR188_RS14765 PF04073 Aminoacyl-tRNA editing domain IR188_RS14770 PF18807 Tripartite Tc toxins repeat IR188_RS14770 PF14431 YwqJ-like deaminase IR188_RS14775 PF00149 Calcineurin-like phosphoesterase IR188_RS14775 PF02872 5'-nucleotidase, C-terminal domain IR188_RS14780 PF02254 TrkA-N domain IR188_RS14780 PF00999 Sodium/hydrogen exchanger family IR188_RS14785 PF00294 pfkB family carbohydrate kinase IR188_RS14790 PF02706 Chain length determinant protein IR188_RS14795 PF00762 Ferrochelatase IR188_RS14800 PF05191 Adenylate kinase, active site lid IR188_RS14805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IR188_RS14805 PF00183 Hsp90 protein IR188_RS14810 PF13662 Toprim domain IR188_RS14810 PF02132 RecR protein IR188_RS14815 PF02575 YbaB/EbfC DNA-binding family IR188_RS14820 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding IR188_RS14820 PF12169 DNA polymerase III subunits gamma and tau domain III IR188_RS14820 PF12170 DNA polymerase III tau subunit V interacting with alpha IR188_RS14825 PF00156 Phosphoribosyl transferase domain IR188_RS14835 PF10689 Protein of unknown function (DUF2496) IR188_RS14840 PF00924 Mechanosensitive ion channel IR188_RS14840 PF12795 Mechanosensitive ion channel porin domain IR188_RS14840 PF12794 Mechanosensitive ion channel inner membrane domain 1 IR188_RS14845 PF02635 DsrE/DsrF-like family IR188_RS14850 PF08361 MAATS-type transcriptional repressor, C-terminal region IR188_RS14850 PF00440 Bacterial regulatory proteins, tetR family IR188_RS14855 PF00529 HlyD membrane-fusion protein of T1SS IR188_RS14855 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IR188_RS14860 PF00873 AcrB/AcrD/AcrF family IR188_RS14870 PF05321 Haemolysin expression modulating protein IR188_RS14885 PF00909 Ammonium Transporter Family IR188_RS14890 PF00543 Nitrogen regulatory protein P-II IR188_RS14895 PF00005 ABC transporter IR188_RS14895 PF00664 ABC transporter transmembrane region IR188_RS14900 PF00664 ABC transporter transmembrane region IR188_RS14900 PF00005 ABC transporter IR188_RS14905 PF13404 AsnC-type helix-turn-helix domain IR188_RS14905 PF01037 Lrp/AsnC ligand binding domain IR188_RS14915 PF06508 Queuosine biosynthesis protein QueC IR188_RS14930 PF13145 PPIC-type PPIASE domain IR188_RS14935 PF00216 Bacterial DNA-binding protein IR188_RS14940 PF02190 ATP-dependent protease La (LON) substrate-binding domain IR188_RS14940 PF05362 Lon protease (S16) C-terminal proteolytic domain IR188_RS14940 PF00004 ATPase family associated with various cellular activities (AAA) IR188_RS14945 PF06689 ClpX C4-type zinc finger IR188_RS14945 PF10431 C-terminal, D2-small domain, of ClpB protein IR188_RS14945 PF07724 AAA domain (Cdc48 subfamily) IR188_RS14950 PF00574 Clp protease IR188_RS14955 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IR188_RS14955 PF05698 Bacterial trigger factor protein (TF) C-terminus IR188_RS14955 PF05697 Bacterial trigger factor protein (TF) IR188_RS14960 PF01722 BolA-like protein IR188_RS14965 PF03923 Uncharacterized lipoprotein IR188_RS14965 PF08139 Prokaryotic membrane lipoprotein lipid attachment site IR188_RS14970 PF07690 Major Facilitator Superfamily IR188_RS14975 PF03502 Nucleoside-specific channel-forming protein, Tsx IR188_RS14980 PF06481 COX Aromatic Rich Motif IR188_RS14980 PF00116 Cytochrome C oxidase subunit II, periplasmic domain IR188_RS14985 PF00115 Cytochrome C and Quinol oxidase polypeptide I IR188_RS14990 PF00510 Cytochrome c oxidase subunit III IR188_RS14995 PF03626 Prokaryotic Cytochrome C oxidase subunit IV IR188_RS15000 PF01040 UbiA prenyltransferase family IR188_RS15005 PF07690 Major Facilitator Superfamily IR188_RS15010 PF04461 Protein of unknown function (DUF520) IR188_RS15015 PF08546 Ketopantoate reductase PanE/ApbA C terminal IR188_RS15015 PF02558 Ketopantoate reductase PanE/ApbA IR188_RS15020 PF01965 DJ-1/PfpI family IR188_RS15030 PF02568 Thiamine biosynthesis protein (ThiI) IR188_RS15030 PF02926 THUMP domain IR188_RS15035 PF02609 Exonuclease VII small subunit IR188_RS15040 PF00348 Polyprenyl synthetase IR188_RS15045 PF02780 Transketolase, C-terminal domain IR188_RS15045 PF02779 Transketolase, pyrimidine binding domain IR188_RS15045 PF13292 1-deoxy-D-xylulose-5-phosphate synthase IR188_RS15050 PF00586 AIR synthase related protein, N-terminal domain IR188_RS15050 PF02769 AIR synthase related protein, C-terminal domain IR188_RS15055 PF01029 NusB family IR188_RS15060 PF00885 6,7-dimethyl-8-ribityllumazine synthase IR188_RS15065 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IR188_RS15065 PF01872 RibD C-terminal domain IR188_RS15070 PF03477 ATP cone domain IR188_RS15075 PF02355 Protein export membrane protein IR188_RS15075 PF07549 SecD/SecF GG Motif IR188_RS15080 PF02355 Protein export membrane protein IR188_RS15080 PF07549 SecD/SecF GG Motif IR188_RS15080 PF13721 SecD export protein N-terminal TM region IR188_RS15085 PF02699 Preprotein translocase subunit IR188_RS15090 PF01702 Queuine tRNA-ribosyltransferase IR188_RS15095 PF02547 Queuosine biosynthesis protein IR188_RS15100 PF04336 Acyl carrier protein phosphodiesterase IR188_RS15105 PF10417 C-terminal domain of 1-Cys peroxiredoxin IR188_RS15105 PF00578 AhpC/TSA family IR188_RS15110 PF05525 Branched-chain amino acid transport protein IR188_RS15115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IR188_RS15115 PF00512 His Kinase A (phospho-acceptor) domain IR188_RS15115 PF00989 PAS fold IR188_RS15115 PF11808 Phosphate regulon sensor protein PhoR IR188_RS15120 PF00072 Response regulator receiver domain IR188_RS15120 PF00486 Transcriptional regulatory protein, C terminal IR188_RS15125 PF00149 Calcineurin-like phosphoesterase IR188_RS15125 PF12320 Type 5 capsule protein repressor C-terminal domain IR188_RS15130 PF13476 AAA domain IR188_RS15140 PF00480 ROK family IR188_RS15145 PF04381 Putative exonuclease, RdgC IR188_RS15160 PF01206 Sulfurtransferase TusA IR188_RS15165 PF04143 Sulphur transport IR188_RS15170 PF00586 AIR synthase related protein, N-terminal domain IR188_RS15170 PF02769 AIR synthase related protein, C-terminal domain IR188_RS15175 PF01924 Hydrogenase formation hypA family IR188_RS15180 PF02492 CobW/HypB/UreG, nucleotide-binding domain IR188_RS15185 PF02673 Bacitracin resistance protein BacA IR188_RS15190 PF02152 Dihydroneopterin aldolase IR188_RS15195 PF02660 Glycerol-3-phosphate acyltransferase IR188_RS15200 PF00814 Glycoprotease family IR188_RS15205 PF01165 Ribosomal protein S21 IR188_RS15210 PF01807 CHC2 zinc finger IR188_RS15210 PF08275 DNA primase catalytic core, N-terminal domain IR188_RS15210 PF08278 DNA primase DnaG DnaB-binding IR188_RS15210 PF10410 DnaB-helicase binding domain of primase IR188_RS15215 PF03979 Sigma-70 factor, region 1.1 IR188_RS15215 PF04539 Sigma-70 region 3 IR188_RS15215 PF00140 Sigma-70 factor, region 1.2 IR188_RS15215 PF04546 Sigma-70, non-essential region IR188_RS15215 PF04545 Sigma-70, region 4 IR188_RS15215 PF04542 Sigma-70 region 2 IR188_RS15230 PF06832 Penicillin-Binding Protein C-terminus Family IR188_RS15230 PF00912 Transglycosylase IR188_RS15230 PF00905 Penicillin binding protein transpeptidase domain IR188_RS15235 PF07703 Alpha-2-macroglobulin bait region domain IR188_RS15235 PF01835 MG2 domain IR188_RS15235 PF17962 Bacterial macroglobulin domain 6 IR188_RS15235 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain IR188_RS15235 PF11974 Bacterial alpha-2-macroglobulin MG3 domain IR188_RS15235 PF00207 Alpha-2-macroglobulin family IR188_RS15235 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain IR188_RS15240 PF00144 Beta-lactamase IR188_RS15245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IR188_RS15245 PF03466 LysR substrate binding domain IR188_RS15250 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA IR188_RS15255 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE IR188_RS15260 PF01750 Hydrogenase maturation protease IR188_RS15265 PF00374 Nickel-dependent hydrogenase IR188_RS15270 PF03916 Polysulphide reductase, NrfD IR188_RS15275 PF13247 4Fe-4S dicluster domain IR188_RS15280 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit IR188_RS15280 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal IR188_RS15285 PF00209 Sodium:neurotransmitter symporter family IR188_RS15290 PF00282 Pyridoxal-dependent decarboxylase conserved domain IR188_RS15295 PF04393 Protein of unknown function (DUF535) IR188_RS15300 PF09335 SNARE associated Golgi protein IR188_RS15305 PF05957 Bacterial protein of unknown function (DUF883) IR188_RS15310 PF07332 Putative Actinobacterial Holin-X, holin superfamily III IR188_RS15320 PF07681 DoxX IR188_RS15330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IR188_RS15330 PF03466 LysR substrate binding domain IR188_RS15335 PF17954 Quercetinase C-terminal cupin domain IR188_RS15335 PF02678 Pirin IR188_RS15345 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IR188_RS15350 PF04348 LppC putative lipoprotein IR188_RS15355 PF02021 Uncharacterised protein family UPF0102 IR188_RS15360 PF13580 SIS domain IR188_RS15365 PF04972 BON domain IR188_RS15370 PF00912 Transglycosylase IR188_RS15380 PF00989 PAS fold IR188_RS15380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IR188_RS15380 PF00512 His Kinase A (phospho-acceptor) domain IR188_RS15380 PF00072 Response regulator receiver domain IR188_RS15380 PF01627 Hpt domain IR188_RS15380 PF18415 Histidine kinase receptor ArcB trans-membrane domain IR188_RS15385 PF01493 GXGXG motif IR188_RS15385 PF01645 Conserved region in glutamate synthase IR188_RS15385 PF04898 Glutamate synthase central domain IR188_RS15385 PF00310 Glutamine amidotransferases class-II IR188_RS15390 PF07992 Pyridine nucleotide-disulphide oxidoreductase IR188_RS15390 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster IR188_RS15395 PF04386 Stringent starvation protein B IR188_RS15400 PF00043 Glutathione S-transferase, C-terminal domain IR188_RS15400 PF02798 Glutathione S-transferase, N-terminal domain IR188_RS15405 PF00380 Ribosomal protein S9/S16 IR188_RS15410 PF00572 Ribosomal protein L13 IR188_RS15415 PF03969 AFG1-like ATPase IR188_RS15420 PF06295 Protein of unknown function (DUF1043) IR188_RS15425 PF13180 PDZ domain IR188_RS15425 PF00595 PDZ domain IR188_RS15430 PF01077 Nitrite and sulphite reductase 4Fe-4S domain IR188_RS15430 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain IR188_RS15435 PF00258 Flavodoxin IR188_RS15435 PF00175 Oxidoreductase NAD-binding domain IR188_RS15435 PF00667 FAD binding domain IR188_RS15440 PF04069 Substrate binding domain of ABC-type glycine betaine transport system IR188_RS15445 PF00005 ABC transporter IR188_RS15450 PF00528 Binding-protein-dependent transport system inner membrane component IR188_RS15455 PF02668 Taurine catabolism dioxygenase TauD, TfdA family IR188_RS15460 PF13180 PDZ domain IR188_RS15465 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IR188_RS15470 PF01722 BolA-like protein IR188_RS15480 PF05494 MlaC protein IR188_RS15485 PF02470 MlaD protein IR188_RS15490 PF02405 Permease MlaE IR188_RS15495 PF00005 ABC transporter IR188_RS15500 PF01699 Sodium/calcium exchanger protein IR188_RS15505 PF01380 SIS domain IR188_RS15505 PF00571 CBS domain IR188_RS15515 PF06835 Lipopolysaccharide-assembly, LptC-related IR188_RS15520 PF03968 OstA-like protein IR188_RS15525 PF12399 Branched-chain amino acid ATP-binding cassette transporter IR188_RS15525 PF00005 ABC transporter IR188_RS15530 PF04552 Sigma-54, DNA binding domain IR188_RS15530 PF04963 Sigma-54 factor, core binding domain IR188_RS15530 PF00309 Sigma-54 factor, Activator interacting domain (AID) IR188_RS15535 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein IR188_RS15540 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IR188_RS15545 PF03668 P-loop ATPase protein family IR188_RS15550 PF00381 PTS HPr component phosphorylation site IR188_RS15555 PF14760 Rnk N-terminus IR188_RS15555 PF01272 Transcription elongation factor, GreA/GreB, C-term IR188_RS15560 PF00593 TonB dependent receptor IR188_RS15560 PF07715 TonB-dependent Receptor Plug Domain IR188_RS15565 PF01497 Periplasmic binding protein IR188_RS15570 PF01523 Putative modulator of DNA gyrase IR188_RS15575 PF04751 Protein of unknown function (DUF615) IR188_RS15580 PF01337 Barstar (barnase inhibitor) IR188_RS15585 PF00545 ribonuclease IR188_RS15590 PF01523 Putative modulator of DNA gyrase IR188_RS15595 PF00795 Carbon-nitrogen hydrolase IR188_RS15600 PF13502 AsmA-like C-terminal region IR188_RS15600 PF13116 Protein of unknown function IR188_RS15605 PF00575 S1 RNA binding domain IR188_RS15605 PF10150 Ribonuclease E/G family IR188_RS15610 PF02545 Maf-like protein IR188_RS15615 PF04093 rod shape-determining protein MreD IR188_RS15620 PF04085 rod shape-determining protein MreC IR188_RS15630 PF01220 Dehydroquinase class II IR188_RS15635 PF00364 Biotin-requiring enzyme IR188_RS15640 PF00289 Biotin carboxylase, N-terminal domain IR188_RS15640 PF02785 Biotin carboxylase C-terminal domain IR188_RS15640 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IR188_RS15650 PF01207 Dihydrouridine synthase (Dus) IR188_RS15655 PF02954 Bacterial regulatory protein, Fis family IR188_RS15670 PF07690 Major Facilitator Superfamily IR188_RS15675 PF00593 TonB dependent receptor IR188_RS15675 PF07715 TonB-dependent Receptor Plug Domain IR188_RS15680 PF01979 Amidohydrolase family IR188_RS15685 PF00672 HAMP domain IR188_RS15685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IR188_RS15685 PF02203 Tar ligand binding domain homologue IR188_RS15690 PF03605 Anaerobic c4-dicarboxylate membrane transporter IR188_RS15695 PF00072 Response regulator receiver domain IR188_RS15695 PF00486 Transcriptional regulatory protein, C terminal IR188_RS15700 PF13493 Domain of unknown function (DUF4118) IR188_RS15700 PF13492 GAF domain IR188_RS15700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IR188_RS15700 PF00512 His Kinase A (phospho-acceptor) domain IR188_RS15700 PF02702 Osmosensitive K+ channel His kinase sensor domain IR188_RS15705 PF02669 K+-transporting ATPase, c chain IR188_RS15715 PF03814 Potassium-transporting ATPase A subunit IR188_RS15725 PF00583 Acetyltransferase (GNAT) family IR188_RS15735 PF00005 ABC transporter IR188_RS15740 PF00005 ABC transporter IR188_RS15740 PF12399 Branched-chain amino acid ATP-binding cassette transporter IR188_RS15745 PF02653 Branched-chain amino acid transport system / permease component IR188_RS15745 PF11862 Domain of unknown function (DUF3382) IR188_RS15750 PF02653 Branched-chain amino acid transport system / permease component IR188_RS15755 PF13458 Periplasmic binding protein IR188_RS15770 PF02595 Glycerate kinase family IR188_RS15775 PF02447 GntP family permease IR188_RS15780 PF05651 Putative sugar diacid recognition IR188_RS15780 PF17853 GGDEF-like domain IR188_RS15780 PF13556 PucR C-terminal helix-turn-helix domain IR188_RS15790 PF00140 Sigma-70 factor, region 1.2 IR188_RS15790 PF04542 Sigma-70 region 2 IR188_RS15790 PF04545 Sigma-70, region 4 IR188_RS15795 PF18075 FtsX extracellular domain IR188_RS15795 PF02687 FtsX-like permease family IR188_RS15800 PF00005 ABC transporter IR188_RS15805 PF00448 SRP54-type protein, GTPase domain IR188_RS15805 PF02881 SRP54-type protein, helical bundle domain IR188_RS15805 PF00448 SRP54-type protein, GTPase domain IR188_RS15805 PF02881 SRP54-type protein, helical bundle domain IR188_RS15815 PF06611 Protein of unknown function (DUF1145) IR188_RS15825 PF07947 YhhN family IR188_RS15830 PF00403 Heavy-metal-associated domain IR188_RS15835 PF05675 Protein of unknown function (DUF817) IR188_RS15840 PF01206 Sulfurtransferase TusA IR188_RS15845 PF02592 Putative vitamin uptake transporter IR188_RS15850 PF00465 Iron-containing alcohol dehydrogenase IR188_RS15855 PF11769 Protein of unknown function (DUF3313) IR188_RS15860 PF13183 4Fe-4S dicluster domain IR188_RS15860 PF02754 Cysteine-rich domain IR188_RS15865 PF00890 FAD binding domain IR188_RS15870 PF04324 BFD-like [2Fe-2S] binding domain IR188_RS15870 PF01266 FAD dependent oxidoreductase IR188_RS15875 PF00890 FAD binding domain IR188_RS15875 PF02910 Fumarate reductase flavoprotein C-term IR188_RS15880 PF13183 4Fe-4S dicluster domain IR188_RS15880 PF13085 2Fe-2S iron-sulfur cluster binding domain IR188_RS15885 PF02300 Fumarate reductase subunit C IR188_RS15890 PF02313 Fumarate reductase subunit D IR188_RS15895 PF08244 Glycosyl hydrolases family 32 C terminal IR188_RS15895 PF00251 Glycosyl hydrolases family 32 N-terminal domain IR188_RS15900 PF01455 HupF/HypC family IR188_RS15905 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA IR188_RS15910 PF12800 4Fe-4S binding domain IR188_RS15910 PF13247 4Fe-4S dicluster domain IR188_RS15915 PF00158 Sigma-54 interaction domain IR188_RS15915 PF01590 GAF domain IR188_RS15925 PF00892 EamA-like transporter family IR188_RS15945 PF02554 Carbon starvation protein CstA IR188_RS15945 PF13722 5TM C-terminal transporter carbon starvation CstA IR188_RS15950 PF04328 Selenoprotein, putative IR188_RS15960 PF01750 Hydrogenase maturation protease IR188_RS15965 PF07450 Formate hydrogenlyase maturation protein HycH IR188_RS15970 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit IR188_RS15975 PF12838 4Fe-4S dicluster domain IR188_RS15980 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit IR188_RS15980 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit IR188_RS15980 PF00374 Nickel-dependent hydrogenase IR188_RS15985 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus IR188_RS15985 PF00361 Proton-conducting membrane transporter IR188_RS15990 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L IR188_RS15995 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus IR188_RS15995 PF00361 Proton-conducting membrane transporter IR188_RS16000 PF00146 NADH dehydrogenase IR188_RS16005 PF00361 Proton-conducting membrane transporter IR188_RS16010 PF00037 4Fe-4S binding domain IR188_RS16010 PF12798 4Fe-4S binding domain IR188_RS16015 PF08019 Phosphoethanolamine transferase EptA/EptB IR188_RS16015 PF00884 Sulfatase IR188_RS16025 PF01132 Elongation factor P (EF-P) OB domain IR188_RS16025 PF08207 Elongation factor P (EF-P) KOW-like domain IR188_RS16025 PF09285 Elongation factor P, C-terminal IR188_RS16030 PF04055 Radical SAM superfamily IR188_RS16035 PF08241 Methyltransferase domain IR188_RS16045 PF13698 Domain of unknown function (DUF4156) IR188_RS16050 PF00206 Lyase IR188_RS16050 PF10397 Adenylosuccinate lyase C-terminus IR188_RS16055 PF02378 Phosphotransferase system, EIIC IR188_RS16055 PF00367 phosphotransferase system, EIIB IR188_RS16060 PF01418 Helix-turn-helix domain, rpiR family IR188_RS16060 PF01380 SIS domain IR188_RS16065 PF00118 TCP-1/cpn60 chaperonin family IR188_RS16070 PF00166 Chaperonin 10 Kd subunit IR188_RS16075 PF04186 FxsA cytoplasmic membrane protein IR188_RS16080 PF00206 Lyase IR188_RS16080 PF10415 Fumarase C C-terminus IR188_RS16085 PF03605 Anaerobic c4-dicarboxylate membrane transporter IR188_RS16100 PF10820 Protein of unknown function (DUF2543) IR188_RS16105 PF03797 Autotransporter beta-domain IR188_RS16110 PF01381 Helix-turn-helix IR188_RS16120 PF00005 ABC transporter IR188_RS16125 PF00005 ABC transporter IR188_RS16130 PF00528 Binding-protein-dependent transport system inner membrane component IR188_RS16135 PF00528 Binding-protein-dependent transport system inner membrane component IR188_RS16140 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IR188_RS16145 PF03831 PhnA domain IR188_RS16145 PF08274 PhnA Zinc-Ribbon IR188_RS16150 PF01381 Helix-turn-helix IR188_RS16155 PF00589 Phage integrase family IR188_RS16180 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain IR188_RS16180 PF02753 Pili assembly chaperone PapD, C-terminal domain IR188_RS16185 PF13953 PapC C-terminal domain IR188_RS16185 PF13954 PapC N-terminal domain IR188_RS16185 PF00577 Outer membrane usher protein IR188_RS16195 PF00419 Fimbrial protein IR188_RS16200 PF00589 Phage integrase family IR188_RS16225 PF00419 Fimbrial protein IR188_RS16230 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain IR188_RS16230 PF02753 Pili assembly chaperone PapD, C-terminal domain IR188_RS16235 PF13954 PapC N-terminal domain IR188_RS16235 PF13953 PapC C-terminal domain IR188_RS16235 PF00577 Outer membrane usher protein IR188_RS16245 PF00419 Fimbrial protein IR188_RS16250 PF00589 Phage integrase family IR188_RS16255 PF01156 Inosine-uridine preferring nucleoside hydrolase IR188_RS16260 PF00267 Gram-negative porin IR188_RS16265 PF14532 Sigma-54 interaction domain IR188_RS16265 PF02954 Bacterial regulatory protein, Fis family IR188_RS16265 PF00072 Response regulator receiver domain IR188_RS16270 PF00512 His Kinase A (phospho-acceptor) domain IR188_RS16270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IR188_RS16270 PF00672 HAMP domain IR188_RS16280 PF07690 Major Facilitator Superfamily IR188_RS16285 PF03797 Autotransporter beta-domain IR188_RS16290 PF09350 Domain of unknown function (DUF1992) IR188_RS16295 PF02631 RecX family IR188_RS16310 PF02753 Pili assembly chaperone PapD, C-terminal domain IR188_RS16310 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain IR188_RS16315 PF13954 PapC N-terminal domain IR188_RS16315 PF13953 PapC C-terminal domain IR188_RS16315 PF00577 Outer membrane usher protein IR188_RS16325 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase IR188_RS16330 PF03062 MBOAT, membrane-bound O-acyltransferase family IR188_RS16345 PF13393 Histidyl-tRNA synthetase IR188_RS16345 PF03129 Anticodon binding domain IR188_RS16350 PF13520 Amino acid permease IR188_RS16355 PF00282 Pyridoxal-dependent decarboxylase conserved domain IR188_RS16360 PF13520 Amino acid permease IR188_RS16365 PF13393 Histidyl-tRNA synthetase IR188_RS16365 PF03129 Anticodon binding domain IR188_RS16370 PF07702 UTRA domain IR188_RS16370 PF00392 Bacterial regulatory proteins, gntR family IR188_RS16375 PF03747 ADP-ribosylglycohydrolase IR188_RS16385 PF00294 pfkB family carbohydrate kinase IR188_RS16390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IR188_RS16390 PF08447 PAS fold IR188_RS16390 PF13426 PAS domain IR188_RS16395 PF02447 GntP family permease IR188_RS16400 PF01202 Shikimate kinase IR188_RS16405 PF00356 Bacterial regulatory proteins, lacI family IR188_RS16405 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family IR188_RS16415 PF01032 FecCD transport family IR188_RS16420 PF00005 ABC transporter IR188_RS16425 PF13649 Methyltransferase domain IR188_RS16430 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain IR188_RS16430 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain IR188_RS16445 PF01053 Cys/Met metabolism PLP-dependent enzyme IR188_RS16450 PF06445 GyrI-like small molecule binding domain IR188_RS16450 PF13411 MerR HTH family regulatory protein IR188_RS16455 PF00924 Mechanosensitive ion channel IR188_RS16465 PF03180 NLPA lipoprotein IR188_RS16470 PF01053 Cys/Met metabolism PLP-dependent enzyme IR188_RS16490 PF07720 Tetratricopeptide repeat IR188_RS16495 PF01312 FlhB HrpN YscU SpaS Family IR188_RS16500 PF01311 Bacterial export proteins, family 1 IR188_RS16505 PF01313 Bacterial export proteins, family 3 IR188_RS16510 PF00813 FliP family IR188_RS16530 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IR188_RS16530 PF02874 ATP synthase alpha/beta family, beta-barrel domain IR188_RS16530 PF18269 T3SS EscN ATPase C-terminal domain IR188_RS16540 PF00771 FHIPEP family IR188_RS16550 PF00263 Bacterial type II and III secretion system protein IR188_RS16550 PF03958 Bacterial type II/III secretion system short domain IR188_RS16555 PF12833 Helix-turn-helix domain IR188_RS16575 PF01514 Secretory protein of YscJ/FliF family IR188_RS16595 PF01381 Helix-turn-helix IR188_RS16600 PF13416 Bacterial extracellular solute-binding protein IR188_RS16605 PF00528 Binding-protein-dependent transport system inner membrane component IR188_RS16610 PF00528 Binding-protein-dependent transport system inner membrane component IR188_RS16615 PF08402 TOBE domain IR188_RS16615 PF00005 ABC transporter IR188_RS16620 PF00578 AhpC/TSA family IR188_RS16620 PF10417 C-terminal domain of 1-Cys peroxiredoxin IR188_RS16625 PF07992 Pyridine nucleotide-disulphide oxidoreductase IR188_RS16625 PF13192 Thioredoxin domain IR188_RS16630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IR188_RS16630 PF03466 LysR substrate binding domain IR188_RS16635 PF07690 Major Facilitator Superfamily IR188_RS16670 PF02369 Bacterial Ig-like domain (group 1) IR188_RS16670 PF11924 Inverse autotransporter, beta-domain IR188_RS16670 PF09134 Invasin, domain 3 IR188_RS16685 PF03009 Glycerophosphoryl diester phosphodiesterase family IR188_RS16690 PF00196 Bacterial regulatory proteins, luxR family IR188_RS16690 PF00072 Response regulator receiver domain IR188_RS16695 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term IR188_RS16695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IR188_RS16695 PF00672 HAMP domain IR188_RS16695 PF07730 Histidine kinase IR188_RS16700 PF07690 Major Facilitator Superfamily IR188_RS16705 PF14710 Respiratory nitrate reductase alpha N-terminal IR188_RS16705 PF01568 Molydopterin dinucleotide binding domain IR188_RS16705 PF00384 Molybdopterin oxidoreductase IR188_RS16710 PF14711 Respiratory nitrate reductase beta C-terminal IR188_RS16710 PF13247 4Fe-4S dicluster domain IR188_RS16715 PF02613 Nitrate reductase delta subunit IR188_RS16720 PF02665 Nitrate reductase gamma subunit IR188_RS16725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IR188_RS16725 PF03466 LysR substrate binding domain IR188_RS16730 PF02272 DHHA1 domain IR188_RS16730 PF01411 tRNA synthetases class II (A) IR188_RS16730 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IR188_RS16735 PF01810 LysE type translocator IR188_RS16750 PF00171 Aldehyde dehydrogenase family IR188_RS16765 PF00155 Aminotransferase class I and II IR188_RS16765 PF00392 Bacterial regulatory proteins, gntR family IR188_RS16775 PF01546 Peptidase family M20/M25/M40 IR188_RS16775 PF07687 Peptidase dimerisation domain IR188_RS16800 PF02753 Pili assembly chaperone PapD, C-terminal domain IR188_RS16800 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain IR188_RS16830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IR188_RS16830 PF03466 LysR substrate binding domain IR188_RS16835 PF01116 Fructose-bisphosphate aldolase class-II IR188_RS16840 PF00294 pfkB family carbohydrate kinase IR188_RS16845 PF03611 PTS system sugar-specific permease component IR188_RS16855 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IR188_RS16865 PF00593 TonB dependent receptor IR188_RS16865 PF07715 TonB-dependent Receptor Plug Domain IR188_RS16875 PF07687 Peptidase dimerisation domain IR188_RS16875 PF01546 Peptidase family M20/M25/M40 IR188_RS16885 PF01381 Helix-turn-helix IR188_RS16885 PF00145 C-5 cytosine-specific DNA methylase IR188_RS16890 PF03852 DNA mismatch endonuclease Vsr IR188_RS16895 PF13280 WYL domain IR188_RS16895 PF08279 HTH domain IR188_RS16900 PF02798 Glutathione S-transferase, N-terminal domain IR188_RS16910 PF01381 Helix-turn-helix IR188_RS16915 PF03212 Pertactin IR188_RS16915 PF03797 Autotransporter beta-domain IR188_RS16925 PF12161 HsdM N-terminal domain IR188_RS16925 PF02384 N-6 DNA Methylase IR188_RS16945 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) IR188_RS16945 PF18766 SWI2/SNF2 ATPase IR188_RS16945 PF11867 Domain of unknown function (DUF3387) IR188_RS16955 PF12161 HsdM N-terminal domain IR188_RS16955 PF02384 N-6 DNA Methylase IR188_RS16970 PF00589 Phage integrase family IR188_RS16970 PF13356 Arm DNA-binding domain IR188_RS16980 PF00144 Beta-lactamase IR188_RS16985 PF01139 tRNA-splicing ligase RtcB IR188_RS16990 PF06956 Regulator of RNA terminal phosphate cyclase IR188_RS16990 PF00158 Sigma-54 interaction domain IR188_RS16995 PF03739 Lipopolysaccharide export system permease LptF/LptG IR188_RS17000 PF03739 Lipopolysaccharide export system permease LptF/LptG IR188_RS17005 PF00883 Cytosol aminopeptidase family, catalytic domain IR188_RS17005 PF02789 Cytosol aminopeptidase family, N-terminal domain IR188_RS17010 PF04364 DNA polymerase III chi subunit, HolC IR188_RS17015 PF10458 Valyl tRNA synthetase tRNA binding arm IR188_RS17015 PF08264 Anticodon-binding domain of tRNA IR188_RS17015 PF00133 tRNA synthetases class I (I, L, M and V) IR188_RS17020 PF00583 Acetyltransferase (GNAT) family IR188_RS17025 PF06877 Regulator of ribonuclease activity B IR188_RS17030 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IR188_RS17030 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IR188_RS17035 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IR188_RS17035 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IR188_RS17040 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain IR188_RS17040 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain IR188_RS17045 PF01042 Endoribonuclease L-PSP IR188_RS17050 PF00440 Bacterial regulatory proteins, tetR family IR188_RS17060 PF03477 ATP cone domain IR188_RS17060 PF13597 Anaerobic ribonucleoside-triphosphate reductase IR188_RS17070 PF01243 Pyridoxamine 5'-phosphate oxidase IR188_RS17080 PF01541 GIY-YIG catalytic domain IR188_RS17085 PF13508 Acetyltransferase (GNAT) domain IR188_RS17090 PF02036 SCP-2 sterol transfer family IR188_RS17095 PF01136 Peptidase family U32 IR188_RS17100 PF01136 Peptidase family U32 IR188_RS17125 PF06580 Histidine kinase IR188_RS17125 PF07694 5TMR of 5TMR-LYT IR188_RS17130 PF00072 Response regulator receiver domain IR188_RS17130 PF04397 LytTr DNA-binding domain IR188_RS17135 PF03880 DbpA RNA binding domain IR188_RS17135 PF00270 DEAD/DEAH box helicase IR188_RS17135 PF12343 Cold shock protein DEAD box A IR188_RS17135 PF00271 Helicase conserved C-terminal domain IR188_RS17145 PF07719 Tetratricopeptide repeat IR188_RS17145 PF13181 Tetratricopeptide repeat IR188_RS17150 PF00575 S1 RNA binding domain IR188_RS17150 PF03725 3' exoribonuclease family, domain 2 IR188_RS17150 PF00013 KH domain IR188_RS17150 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain IR188_RS17150 PF01138 3' exoribonuclease family, domain 1 IR188_RS17155 PF00312 Ribosomal protein S15 IR188_RS17160 PF01509 TruB family pseudouridylate synthase (N terminal domain) IR188_RS17160 PF16198 tRNA pseudouridylate synthase B C-terminal domain IR188_RS17160 PF09157 Pseudouridine synthase II TruB, C-terminal IR188_RS17165 PF02033 Ribosome-binding factor A IR188_RS17170 PF03144 Elongation factor Tu domain 2 IR188_RS17170 PF11987 Translation-initiation factor 2 IR188_RS17170 PF04760 Translation initiation factor IF-2, N-terminal region IR188_RS17170 PF00009 Elongation factor Tu GTP binding domain IR188_RS17170 PF08364 Bacterial translation initiation factor IF-2 associated region IR188_RS17175 PF13184 NusA-like KH domain IR188_RS17175 PF08529 NusA N-terminal domain IR188_RS17175 PF00575 S1 RNA binding domain IR188_RS17180 PF17384 RimP C-terminal SH3 domain IR188_RS17180 PF02576 RimP N-terminal domain IR188_RS17195 PF03840 Preprotein translocase SecG subunit IR188_RS17200 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IR188_RS17200 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IR188_RS17200 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IR188_RS17200 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IR188_RS17205 PF00809 Pterin binding enzyme IR188_RS17210 PF01434 Peptidase family M41 IR188_RS17210 PF06480 FtsH Extracellular IR188_RS17210 PF00004 ATPase family associated with various cellular activities (AAA) IR188_RS17210 PF17862 AAA+ lid domain IR188_RS17215 PF01728 FtsJ-like methyltransferase IR188_RS17220 PF01985 CRS1 / YhbY (CRM) domain IR188_RS17225 PF01272 Transcription elongation factor, GreA/GreB, C-term IR188_RS17225 PF03449 Transcription elongation factor, N-terminal IR188_RS17230 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family IR188_RS17235 PF01018 GTP1/OBG IR188_RS17235 PF01926 50S ribosome-binding GTPase IR188_RS17240 PF01016 Ribosomal L27 protein IR188_RS17245 PF00829 Ribosomal prokaryotic L21 protein IR188_RS17250 PF00348 Polyprenyl synthetase IR188_RS17260 PF13693 Winged helix-turn-helix DNA-binding IR188_RS17265 PF00056 lactate/malate dehydrogenase, NAD binding domain IR188_RS17265 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain IR188_RS17270 PF01316 Arginine repressor, DNA binding domain IR188_RS17270 PF02863 Arginine repressor, C-terminal domain IR188_RS17275 PF02875 Mur ligase family, glutamate ligase domain IR188_RS17275 PF01225 Mur ligase family, catalytic domain IR188_RS17275 PF08245 Mur ligase middle domain IR188_RS17280 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain IR188_RS17285 PF00719 Inorganic pyrophosphatase IR188_RS17290 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like IR188_RS17295 PF04357 TamB, inner membrane protein subunit of TAM complex IR188_RS17300 PF01103 Surface antigen IR188_RS17300 PF07244 Surface antigen variable number repeat IR188_RS17300 PF17243 POTRA domain TamA domain 1 IR188_RS17305 PF01625 Peptide methionine sulfoxide reductase IR188_RS17310 PF01595 Cyclin M transmembrane N-terminal domain IR188_RS17310 PF03471 Transporter associated domain IR188_RS17310 PF00571 CBS domain IR188_RS17315 PF06526 Protein of unknown function (DUF1107) IR188_RS17320 PF00459 Inositol monophosphatase family IR188_RS17325 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase IR188_RS17325 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IR188_RS17335 PF01281 Ribosomal protein L9, N-terminal domain IR188_RS17335 PF03948 Ribosomal protein L9, C-terminal domain IR188_RS17340 PF01084 Ribosomal protein S18 IR188_RS17345 PF00436 Single-strand binding protein family IR188_RS17350 PF01250 Ribosomal protein S6 IR188_RS17355 PF08032 RNA 2'-O ribose methyltransferase substrate binding IR188_RS17355 PF00588 SpoU rRNA Methylase family IR188_RS17360 PF08461 Ribonuclease R winged-helix domain IR188_RS17360 PF00575 S1 RNA binding domain IR188_RS17360 PF00773 RNB domain IR188_RS17360 PF17876 Cold shock domain IR188_RS17360 PF08206 Ribonuclease B OB domain IR188_RS17365 PF02082 Transcriptional regulator IR188_RS17370 PF00709 Adenylosuccinate synthetase IR188_RS17375 PF01145 SPFH domain / Band 7 family IR188_RS17380 PF12221 Bacterial membrane protein N terminal IR188_RS17380 PF01145 SPFH domain / Band 7 family IR188_RS17385 PF01926 50S ribosome-binding GTPase IR188_RS17385 PF13167 GTP-binding GTPase N-terminal IR188_RS17385 PF16360 GTP-binding GTPase Middle Region IR188_RS17390 PF17209 Hfq protein IR188_RS17400 PF01119 DNA mismatch repair protein, C-terminal domain IR188_RS17400 PF08676 MutL C terminal dimerisation domain IR188_RS17405 PF01520 N-acetylmuramoyl-L-alanine amidase IR188_RS17410 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE IR188_RS17415 PF08331 Domain of unknown function (DUF1730) IR188_RS17435 PF00929 Exonuclease IR188_RS17440 PF03193 RsgA GTPase IR188_RS17445 PF02666 Phosphatidylserine decarboxylase IR188_RS17450 PF12795 Mechanosensitive ion channel porin domain IR188_RS17450 PF00924 Mechanosensitive ion channel IR188_RS17450 PF12794 Mechanosensitive ion channel inner membrane domain 1 IR188_RS17465 PF12146 Serine aminopeptidase, S33 IR188_RS17470 PF00270 DEAD/DEAH box helicase IR188_RS17470 PF09382 RQC domain IR188_RS17470 PF00271 Helicase conserved C-terminal domain IR188_RS17470 PF16124 RecQ zinc-binding IR188_RS17470 PF00570 HRDC domain IR188_RS17475 PF00892 EamA-like transporter family IR188_RS17485 PF01544 CorA-like Mg2+ transporter protein IR188_RS17490 PF13361 UvrD-like helicase C-terminal domain IR188_RS17490 PF00580 UvrD/REP helicase N-terminal domain IR188_RS17495 PF13419 Haloacid dehalogenase-like hydrolase IR188_RS17500 PF02899 Phage integrase, N-terminal SAM-like domain IR188_RS17500 PF00589 Phage integrase family IR188_RS17510 PF01678 Diaminopimelate epimerase IR188_RS17515 PF13627 Prokaryotic lipoprotein-attachment site IR188_RS17520 PF01491 Frataxin-like domain IR188_RS17525 PF01295 Adenylate cyclase, class-I IR188_RS17525 PF12633 Adenylate cyclase NT domain IR188_RS17530 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain IR188_RS17530 PF03900 Porphobilinogen deaminase, C-terminal domain IR188_RS17535 PF02602 Uroporphyrinogen-III synthase HemD IR188_RS17540 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase IR188_RS17545 PF07719 Tetratricopeptide repeat IR188_RS17545 PF07219 HemY protein N-terminus IR188_RS17570 PF03808 Glycosyl transferase WecB/TagA/CpsF family IR188_RS17575 PF06899 WzyE protein, O-antigen assembly polymerase IR188_RS17580 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 IR188_RS17585 PF01943 Polysaccharide biosynthesis protein IR188_RS17590 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family IR188_RS17600 PF00483 Nucleotidyl transferase IR188_RS17605 PF16363 GDP-mannose 4,6 dehydratase IR188_RS17610 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain IR188_RS17610 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain IR188_RS17610 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain IR188_RS17615 PF02350 UDP-N-acetylglucosamine 2-epimerase IR188_RS17620 PF02706 Chain length determinant protein IR188_RS17625 PF00953 Glycosyl transferase family 4 IR188_RS17630 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IR188_RS17630 PF07498 Rho termination factor, N-terminal domain IR188_RS17630 PF07497 Rho termination factor, RNA-binding domain IR188_RS17635 PF00085 Thioredoxin IR188_RS17640 PF00270 DEAD/DEAH box helicase IR188_RS17640 PF00271 Helicase conserved C-terminal domain IR188_RS17645 PF02541 Ppx/GppA phosphatase family IR188_RS17650 PF13361 UvrD-like helicase C-terminal domain IR188_RS17650 PF00580 UvrD/REP helicase N-terminal domain IR188_RS17655 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain IR188_RS17655 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain IR188_RS17660 PF03466 LysR substrate binding domain IR188_RS17660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IR188_RS17665 PF00585 C-terminal regulatory domain of Threonine dehydratase IR188_RS17665 PF00291 Pyridoxal-phosphate dependent enzyme IR188_RS17670 PF00920 Dehydratase family IR188_RS17675 PF01063 Amino-transferase class IV IR188_RS17685 PF00205 Thiamine pyrophosphate enzyme, central domain IR188_RS17685 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IR188_RS17685 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IR188_RS17690 PF08046 IlvGEDA operon leader peptide IR188_RS17695 PF13335 Magnesium chelatase, subunit ChlI C-terminal IR188_RS17695 PF01078 Magnesium chelatase, subunit ChlI IR188_RS17700 PF04219 Protein of unknown function, DUF IR188_RS17705 PF03466 LysR substrate binding domain IR188_RS17705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IR188_RS17740 PF00132 Bacterial transferase hexapeptide (six repeats) IR188_RS17750 PF08501 Shikimate dehydrogenase substrate binding domain IR188_RS17750 PF01488 Shikimate / quinate 5-dehydrogenase IR188_RS17750 PF18317 Shikimate 5'-dehydrogenase C-terminal domain IR188_RS17755 PF01300 Telomere recombination IR188_RS17760 PF01396 Topoisomerase DNA binding C4 zinc finger IR188_RS17765 PF02481 DNA recombination-mediator protein A IR188_RS17765 PF17782 DprA winged helix domain IR188_RS17770 PF01327 Polypeptide deformylase IR188_RS17775 PF00551 Formyl transferase IR188_RS17775 PF02911 Formyl transferase, C-terminal domain IR188_RS17780 PF01189 16S rRNA methyltransferase RsmB/F IR188_RS17780 PF01029 NusB family IR188_RS17785 PF02080 TrkA-C domain IR188_RS17785 PF02254 TrkA-N domain IR188_RS17790 PF01741 Large-conductance mechanosensitive channel, MscL IR188_RS17795 PF03889 Alternative ribosome-rescue factor A IR188_RS17800 PF13411 MerR HTH family regulatory protein IR188_RS17805 PF01196 Ribosomal protein L17 IR188_RS17810 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain IR188_RS17810 PF01000 RNA polymerase Rpb3/RpoA insert domain IR188_RS17810 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain IR188_RS17815 PF00163 Ribosomal protein S4/S9 N-terminal domain IR188_RS17815 PF01479 S4 domain IR188_RS17820 PF00411 Ribosomal protein S11 IR188_RS17825 PF00416 Ribosomal protein S13/S18 IR188_RS17830 PF00444 Ribosomal protein L36 IR188_RS17835 PF00344 SecY translocase IR188_RS17840 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A IR188_RS17845 PF00327 Ribosomal protein L30p/L7e IR188_RS17850 PF03719 Ribosomal protein S5, C-terminal domain IR188_RS17850 PF00333 Ribosomal protein S5, N-terminal domain IR188_RS17855 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast IR188_RS17860 PF00347 Ribosomal protein L6 IR188_RS17865 PF00410 Ribosomal protein S8 IR188_RS17870 PF00253 Ribosomal protein S14p/S29e IR188_RS17875 PF00281 Ribosomal protein L5 IR188_RS17875 PF00673 ribosomal L5P family C-terminus IR188_RS17880 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 IR188_RS17880 PF00467 KOW motif IR188_RS17885 PF00238 Ribosomal protein L14p/L23e IR188_RS17890 PF00366 Ribosomal protein S17 IR188_RS17895 PF00831 Ribosomal L29 protein IR188_RS17900 PF00252 Ribosomal protein L16p/L10e IR188_RS17905 PF00189 Ribosomal protein S3, C-terminal domain IR188_RS17905 PF07650 KH domain IR188_RS17910 PF00237 Ribosomal protein L22p/L17e IR188_RS17915 PF00203 Ribosomal protein S19 IR188_RS17920 PF00181 Ribosomal Proteins L2, RNA binding domain IR188_RS17920 PF03947 Ribosomal Proteins L2, C-terminal domain IR188_RS17925 PF00276 Ribosomal protein L23 IR188_RS17930 PF00573 Ribosomal protein L4/L1 family IR188_RS17935 PF00297 Ribosomal protein L3 IR188_RS17940 PF00338 Ribosomal protein S10p/S20e IR188_RS17945 PF00210 Ferritin-like domain IR188_RS17950 PF04324 BFD-like [2Fe-2S] binding domain IR188_RS17955 PF00009 Elongation factor Tu GTP binding domain IR188_RS17955 PF03144 Elongation factor Tu domain 2 IR188_RS17955 PF03143 Elongation factor Tu C-terminal domain IR188_RS17980 PF00485 Phosphoribulokinase / Uridine kinase family IR188_RS17985 PF02237 Biotin protein ligase C terminal domain IR188_RS17985 PF03099 Biotin/lipoate A/B protein ligase family IR188_RS17985 PF08279 HTH domain IR188_RS17990 PF01565 FAD binding domain IR188_RS17990 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain IR188_RS18025 PF01177 Asp/Glu/Hydantoin racemase IR188_RS18030 PF07715 TonB-dependent Receptor Plug Domain IR188_RS18030 PF00593 TonB dependent receptor IR188_RS18035 PF05958 tRNA (Uracil-5-)-methyltransferase IR188_RS18040 PF10670 Domain of unknown function (DUF4198) IR188_RS18050 PF01891 Cobalt uptake substrate-specific transmembrane region IR188_RS18060 PF00005 ABC transporter IR188_RS18065 PF00860 Permease family IR188_RS18070 PF00528 Binding-protein-dependent transport system inner membrane component IR188_RS18075 PF00528 Binding-protein-dependent transport system inner membrane component IR188_RS18080 PF00497 Bacterial extracellular solute-binding proteins, family 3 IR188_RS18090 PF02753 Pili assembly chaperone PapD, C-terminal domain IR188_RS18090 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain IR188_RS18095 PF13953 PapC C-terminal domain IR188_RS18095 PF13954 PapC N-terminal domain IR188_RS18095 PF00577 Outer membrane usher protein IR188_RS18105 PF02753 Pili assembly chaperone PapD, C-terminal domain IR188_RS18105 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain IR188_RS18115 PF01895 PhoU domain IR188_RS18120 PF00005 ABC transporter IR188_RS18125 PF00528 Binding-protein-dependent transport system inner membrane component IR188_RS18130 PF00528 Binding-protein-dependent transport system inner membrane component IR188_RS18135 PF12849 PBP superfamily domain IR188_RS18140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IR188_RS18140 PF00672 HAMP domain IR188_RS18140 PF00512 His Kinase A (phospho-acceptor) domain IR188_RS18145 PF00486 Transcriptional regulatory protein, C terminal IR188_RS18145 PF00072 Response regulator receiver domain IR188_RS18150 PF03449 Transcription elongation factor, N-terminal IR188_RS18150 PF01272 Transcription elongation factor, GreA/GreB, C-term IR188_RS18155 PF00575 S1 RNA binding domain IR188_RS18155 PF16921 Tex protein YqgF-like domain IR188_RS18155 PF09371 Tex-like protein N-terminal domain IR188_RS18155 PF17674 HHH domain IR188_RS18160 PF04023 FeoA domain IR188_RS18165 PF17910 FeoB cytosolic helical domain IR188_RS18165 PF07664 Ferrous iron transport protein B C terminus IR188_RS18165 PF07670 Nucleoside recognition IR188_RS18165 PF02421 Ferrous iron transport protein B IR188_RS18170 PF09012 FeoC like transcriptional regulator IR188_RS18175 PF00561 alpha/beta hydrolase fold IR188_RS18180 PF00156 Phosphoribosyl transferase domain IR188_RS18185 PF01106 NifU-like domain IR188_RS18185 PF01521 Iron-sulphur cluster biosynthesis IR188_RS18195 PF00581 Rhodanese-like domain IR188_RS18200 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease IR188_RS18200 PF01694 Rhomboid family IR188_RS18205 PF08220 DeoR-like helix-turn-helix domain IR188_RS18205 PF00455 DeoR C terminal sensor domain IR188_RS18210 PF01266 FAD dependent oxidoreductase IR188_RS18210 PF16901 C-terminal domain of alpha-glycerophosphate oxidase IR188_RS18225 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain IR188_RS18225 PF00730 HhH-GPD superfamily base excision DNA repair protein IR188_RS18230 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IR188_RS18230 PF00205 Thiamine pyrophosphate enzyme, central domain IR188_RS18230 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IR188_RS18235 PF07687 Peptidase dimerisation domain IR188_RS18235 PF01546 Peptidase family M20/M25/M40 IR188_RS18240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IR188_RS18240 PF03466 LysR substrate binding domain IR188_RS18245 PF01381 Helix-turn-helix IR188_RS18250 PF00083 Sugar (and other) transporter IR188_RS18250 PF08946 Osmosensory transporter coiled coil IR188_RS18255 PF00875 DNA photolyase IR188_RS18255 PF03441 FAD binding domain of DNA photolyase IR188_RS18260 PF00158 Sigma-54 interaction domain IR188_RS18260 PF13426 PAS domain IR188_RS18260 PF02954 Bacterial regulatory protein, Fis family IR188_RS18265 PF01053 Cys/Met metabolism PLP-dependent enzyme IR188_RS18270 PF03222 Tryptophan/tyrosine permease family IR188_RS18275 PF01381 Helix-turn-helix IR188_RS18280 PF00108 Thiolase, N-terminal domain IR188_RS18280 PF02803 Thiolase, C-terminal domain IR188_RS18285 PF02667 Short chain fatty acid transporter IR188_RS18290 PF01144 Coenzyme A transferase IR188_RS18295 PF01144 Coenzyme A transferase IR188_RS18300 PF00158 Sigma-54 interaction domain IR188_RS18300 PF00072 Response regulator receiver domain IR188_RS18300 PF02954 Bacterial regulatory protein, Fis family IR188_RS18305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IR188_RS18305 PF00989 PAS fold IR188_RS18305 PF00512 His Kinase A (phospho-acceptor) domain IR188_RS18310 PF01081 KDPG and KHG aldolase IR188_RS18315 PF00294 pfkB family carbohydrate kinase IR188_RS18320 PF02614 Glucuronate isomerase IR188_RS18325 PF01232 Mannitol dehydrogenase Rossmann domain IR188_RS18325 PF08125 Mannitol dehydrogenase C-terminal domain IR188_RS18330 PF03786 D-mannonate dehydratase (UxuA) IR188_RS18335 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IR188_RS18340 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component IR188_RS18345 PF03480 Bacterial extracellular solute-binding protein, family 7 IR188_RS18350 PF00392 Bacterial regulatory proteins, gntR family IR188_RS18350 PF07729 FCD domain IR188_RS18355 PF01053 Cys/Met metabolism PLP-dependent enzyme IR188_RS18360 PF03553 Na+/H+ antiporter family IR188_RS18365 PF00291 Pyridoxal-phosphate dependent enzyme IR188_RS18375 PF02753 Pili assembly chaperone PapD, C-terminal domain IR188_RS18375 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain IR188_RS18380 PF00577 Outer membrane usher protein IR188_RS18380 PF13954 PapC N-terminal domain IR188_RS18380 PF13953 PapC C-terminal domain IR188_RS18395 PF00474 Sodium:solute symporter family IR188_RS18400 PF04341 Protein of unknown function, DUF485 IR188_RS18405 PF13193 AMP-binding enzyme C-terminal domain IR188_RS18405 PF00501 AMP-binding enzyme IR188_RS18405 PF16177 Acetyl-coenzyme A synthetase N-terminus IR188_RS18410 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain IR188_RS18410 PF02777 Iron/manganese superoxide dismutases, C-terminal domain IR188_RS18415 PF03473 MOSC domain IR188_RS18415 PF03475 3-alpha domain IR188_RS18425 PF02613 Nitrate reductase delta subunit IR188_RS18430 PF04976 DMSO reductase anchor subunit (DmsC) IR188_RS18435 PF12800 4Fe-4S binding domain IR188_RS18435 PF13247 4Fe-4S dicluster domain IR188_RS18440 PF01568 Molydopterin dinucleotide binding domain IR188_RS18440 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IR188_RS18440 PF00384 Molybdopterin oxidoreductase IR188_RS18450 PF00579 tRNA synthetases class I (W and Y) IR188_RS18455 PF13419 Haloacid dehalogenase-like hydrolase IR188_RS18460 PF00834 Ribulose-phosphate 3 epimerase family IR188_RS18465 PF02086 D12 class N6 adenine-specific DNA methyltransferase IR188_RS18470 PF05036 Sporulation related domain IR188_RS18475 PF01761 3-dehydroquinate synthase IR188_RS18480 PF01202 Shikimate kinase IR188_RS18485 PF00263 Bacterial type II and III secretion system protein IR188_RS18485 PF03958 Bacterial type II/III secretion system short domain IR188_RS18505 PF00912 Transglycosylase IR188_RS18505 PF17092 Penicillin-binding protein OB-like domain IR188_RS18505 PF00905 Penicillin binding protein transpeptidase domain IR188_RS18510 PF00293 NUDIX domain IR188_RS18515 PF07095 Intracellular growth attenuator protein IgaA IR188_RS18520 PF01479 S4 domain IR188_RS18525 PF01430 Hsp33 protein IR188_RS18530 PF01293 Phosphoenolpyruvate carboxykinase IR188_RS18535 PF02678 Pirin IR188_RS18535 PF17954 Quercetinase C-terminal cupin domain IR188_RS18545 PF01384 Phosphate transporter family IR188_RS18550 PF10625 Universal stress protein B (UspB) IR188_RS18555 PF00582 Universal stress protein family IR188_RS18560 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain IR188_RS18560 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase IR188_RS18565 PF04445 Putative SAM-dependent methyltransferase IR188_RS18570 PF01432 Peptidase family M3 IR188_RS18580 PF00589 Phage integrase family IR188_RS18580 PF14659 Phage integrase, N-terminal SAM-like domain IR188_RS18580 PF13356 Arm DNA-binding domain IR188_RS18605 PF00440 Bacterial regulatory proteins, tetR family IR188_RS18610 PF07690 Major Facilitator Superfamily IR188_RS18615 PF00440 Bacterial regulatory proteins, tetR family IR188_RS18615 PF02909 Tetracyclin repressor-like, C-terminal domain IR188_RS18640 PF13610 DDE domain IR188_RS18650 PF00905 Penicillin binding protein transpeptidase domain IR188_RS18655 PF13427 Domain of unknown function (DUF4111) IR188_RS18655 PF01909 Nucleotidyltransferase domain IR188_RS18675 PF00005 ABC transporter IR188_RS18700 PF01609 Transposase DDE domain IR188_RS18700 PF05598 Transposase domain (DUF772) IR188_RS18710 PF05717 IS66 Orf2 like protein IR188_RS18770 PF00665 Integrase core domain IR188_RS18775 PF01695 IstB-like ATP binding protein IR188_RS18780 PF13018 Extended Signal Peptide of Type V secretion system IR188_RS18780 PF03797 Autotransporter beta-domain IR188_RS18780 PF16168 Adhesin of bacterial autotransporter system, probable stalk IR188_RS18785 PF06006 Bacterial protein of unknown function (DUF905) IR188_RS18790 PF06067 Domain of unknown function (DUF932) IR188_RS18795 PF03230 Antirestriction protein IR188_RS18800 PF04002 RadC-like JAB domain IR188_RS18805 PF06174 Protein of unknown function (DUF987) IR188_RS18810 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A IR188_RS18815 PF06755 CbtA_toxin of type IV toxin-antitoxin system IR188_RS18840 PF10928 Protein of unknown function (DUF2810) IR188_RS18855 PF01420 Type I restriction modification DNA specificity domain IR188_RS18860 PF12161 HsdM N-terminal domain IR188_RS18860 PF02384 N-6 DNA Methylase IR188_RS18865 PF04851 Type III restriction enzyme, res subunit IR188_RS18865 PF00271 Helicase conserved C-terminal domain IR188_RS18865 PF08463 EcoEI R protein C-terminal IR188_RS18865 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) IR188_RS18870 PF03824 High-affinity nickel-transport protein IR188_RS18875 PF06226 Protein of unknown function (DUF1007) IR188_RS18880 PF00672 HAMP domain IR188_RS18880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IR188_RS18880 PF02203 Tar ligand binding domain homologue IR188_RS18885 PF02798 Glutathione S-transferase, N-terminal domain