locus-tag class description RBRH_RS00005 PF00308 Bacterial dnaA protein RBRH_RS00005 PF11638 DnaA N-terminal domain RBRH_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix RBRH_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain RBRH_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain RBRH_RS00010 PF02767 DNA polymerase III beta subunit, central domain RBRH_RS00015 PF01751 Toprim domain RBRH_RS00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RBRH_RS00015 PF18053 DNA gyrase B subunit insert domain RBRH_RS00015 PF00204 DNA gyrase B RBRH_RS00015 PF00986 DNA gyrase B subunit, carboxyl terminus RBRH_RS00030 PF00004 ATPase family associated with various cellular activities (AAA) RBRH_RS00060 PF10119 Predicted methyltransferase regulatory domain RBRH_RS00060 PF13847 Methyltransferase domain RBRH_RS00155 PF02321 Outer membrane efflux protein RBRH_RS00160 PF12704 MacB-like periplasmic core domain RBRH_RS00160 PF00005 ABC transporter RBRH_RS00160 PF02687 FtsX-like permease family RBRH_RS00165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RBRH_RS00185 PF00664 ABC transporter transmembrane region RBRH_RS00185 PF00005 ABC transporter RBRH_RS00215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RBRH_RS00215 PF00989 PAS fold RBRH_RS00215 PF01627 Hpt domain RBRH_RS00215 PF00497 Bacterial extracellular solute-binding proteins, family 3 RBRH_RS00215 PF00512 His Kinase A (phospho-acceptor) domain RBRH_RS00215 PF00072 Response regulator receiver domain RBRH_RS00235 PF07690 Major Facilitator Superfamily RBRH_RS00240 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RBRH_RS00240 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RBRH_RS00245 PF16901 C-terminal domain of alpha-glycerophosphate oxidase RBRH_RS00245 PF01266 FAD dependent oxidoreductase RBRH_RS00250 PF02913 FAD linked oxidases, C-terminal domain RBRH_RS00250 PF01565 FAD binding domain RBRH_RS00265 PF00465 Iron-containing alcohol dehydrogenase RBRH_RS00270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RBRH_RS00270 PF03466 LysR substrate binding domain RBRH_RS00275 PF01717 Cobalamin-independent synthase, Catalytic domain RBRH_RS00275 PF08267 Cobalamin-independent synthase, N-terminal domain RBRH_RS00280 PF05175 Methyltransferase small domain RBRH_RS00300 PF04262 Glutamate-cysteine ligase RBRH_RS00305 PF02805 Metal binding domain of Ada RBRH_RS00305 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RBRH_RS00305 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain RBRH_RS00305 PF12833 Helix-turn-helix domain RBRH_RS00310 PF01554 MatE RBRH_RS00335 PF02321 Outer membrane efflux protein RBRH_RS00360 PF07963 Prokaryotic N-terminal methylation motif RBRH_RS00360 PF11612 Type II secretion system (T2SS), protein J RBRH_RS00365 PF02501 Type II secretion system (T2SS), protein I RBRH_RS00365 PF07963 Prokaryotic N-terminal methylation motif RBRH_RS00370 PF07963 Prokaryotic N-terminal methylation motif RBRH_RS00370 PF12019 Type II transport protein GspH RBRH_RS00375 PF08334 Type II secretion system (T2SS), protein G RBRH_RS00375 PF07963 Prokaryotic N-terminal methylation motif RBRH_RS00385 PF00482 Type II secretion system (T2SS), protein F RBRH_RS00390 PF00437 Type II/IV secretion system protein RBRH_RS00395 PF03958 Bacterial type II/III secretion system short domain RBRH_RS00395 PF00263 Bacterial type II and III secretion system protein RBRH_RS00400 PF01464 Transglycosylase SLT domain RBRH_RS00405 PF07683 Cobalamin synthesis protein cobW C-terminal domain RBRH_RS00405 PF02492 CobW/HypB/UreG, nucleotide-binding domain RBRH_RS00410 PF00216 Bacterial DNA-binding protein RBRH_RS00415 PF05430 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS00415 PF01266 FAD dependent oxidoreductase RBRH_RS00425 PF04107 Glutamate-cysteine ligase family 2(GCS2) RBRH_RS00445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RBRH_RS00445 PF00512 His Kinase A (phospho-acceptor) domain RBRH_RS00450 PF00072 Response regulator receiver domain RBRH_RS00450 PF00486 Transcriptional regulatory protein, C terminal RBRH_RS00460 PF01329 Pterin 4 alpha carbinolamine dehydratase RBRH_RS00485 PF13932 GidA associated domain RBRH_RS00485 PF01134 Glucose inhibited division protein A RBRH_RS00490 PF02527 rRNA small subunit methyltransferase G RBRH_RS00495 PF13614 AAA domain RBRH_RS00500 PF17762 HTH domain found in ParB protein RBRH_RS00500 PF02195 ParB-like nuclease domain RBRH_RS00505 PF03600 Citrate transporter RBRH_RS00515 PF00119 ATP synthase A chain RBRH_RS00520 PF00137 ATP synthase subunit C RBRH_RS00525 PF00430 ATP synthase B/B' CF(0) RBRH_RS00530 PF00213 ATP synthase delta (OSCP) subunit RBRH_RS00540 PF00231 ATP synthase RBRH_RS00545 PF02874 ATP synthase alpha/beta family, beta-barrel domain RBRH_RS00545 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RBRH_RS00550 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain RBRH_RS00550 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain RBRH_RS00555 PF13193 AMP-binding enzyme C-terminal domain RBRH_RS00555 PF00501 AMP-binding enzyme RBRH_RS00560 PF01208 Uroporphyrinogen decarboxylase (URO-D) RBRH_RS00565 PF00271 Helicase conserved C-terminal domain RBRH_RS00565 PF18319 PriA DNA helicase Cys-rich region (CRR) domain RBRH_RS00565 PF00270 DEAD/DEAH box helicase RBRH_RS00565 PF17764 3′ DNA-binding domain (3′BD) RBRH_RS00565 PF18074 Primosomal protein N C-terminal domain RBRH_RS00580 PF18327 Proline utilization A proline dehydrogenase N-terminal domain RBRH_RS00580 PF14850 DNA-binding domain of Proline dehydrogenase RBRH_RS00580 PF01619 Proline dehydrogenase RBRH_RS00580 PF00171 Aldehyde dehydrogenase family RBRH_RS00585 PF13458 Periplasmic binding protein RBRH_RS00590 PF03315 Serine dehydratase beta chain RBRH_RS00590 PF03313 Serine dehydratase alpha chain RBRH_RS00605 PF02347 Glycine cleavage system P-protein RBRH_RS00610 PF01597 Glycine cleavage H-protein RBRH_RS00615 PF08669 Glycine cleavage T-protein C-terminal barrel domain RBRH_RS00615 PF01571 Aminomethyltransferase folate-binding domain RBRH_RS00620 PF00580 UvrD/REP helicase N-terminal domain RBRH_RS00620 PF13361 UvrD-like helicase C-terminal domain RBRH_RS00625 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RBRH_RS00640 PF08681 Protein of unknown function (DUF1778) RBRH_RS00655 PF00589 Phage integrase family RBRH_RS00720 PF17482 Phage tail sheath C-terminal domain RBRH_RS00720 PF04984 Phage tail sheath protein subtilisin-like domain RBRH_RS00860 PF04070 Domain of unknown function (DUF378) RBRH_RS00870 PF03060 Nitronate monooxygenase RBRH_RS00880 PF01292 Prokaryotic cytochrome b561 RBRH_RS00890 PF01557 Fumarylacetoacetate (FAA) hydrolase family RBRH_RS00895 PF00171 Aldehyde dehydrogenase family RBRH_RS00900 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase RBRH_RS00910 PF01557 Fumarylacetoacetate (FAA) hydrolase family RBRH_RS00920 PF01165 Ribosomal protein S21 RBRH_RS00935 PF00534 Glycosyl transferases group 1 RBRH_RS00935 PF13439 Glycosyltransferase Family 4 RBRH_RS00940 PF00175 Oxidoreductase NAD-binding domain RBRH_RS00940 PF00970 Oxidoreductase FAD-binding domain RBRH_RS00945 PF13091 PLD-like domain RBRH_RS00950 PF02522 Aminoglycoside 3-N-acetyltransferase RBRH_RS00955 PF03372 Endonuclease/Exonuclease/phosphatase family RBRH_RS00985 PF02152 Dihydroneopterin aldolase RBRH_RS00990 PF01171 PP-loop family RBRH_RS00995 PF00132 Bacterial transferase hexapeptide (six repeats) RBRH_RS00995 PF12804 MobA-like NTP transferase domain RBRH_RS01000 PF01380 SIS domain RBRH_RS01010 PF08240 Alcohol dehydrogenase GroES-like domain RBRH_RS01010 PF00107 Zinc-binding dehydrogenase RBRH_RS01030 PF00106 short chain dehydrogenase RBRH_RS01040 PF01075 Glycosyltransferase family 9 (heptosyltransferase) RBRH_RS01045 PF02543 Carbamoyltransferase N-terminus RBRH_RS01045 PF16861 Carbamoyltransferase C-terminus RBRH_RS01075 PF16363 GDP-mannose 4,6 dehydratase RBRH_RS01080 PF13439 Glycosyltransferase Family 4 RBRH_RS01080 PF00534 Glycosyl transferases group 1 RBRH_RS01095 PF02735 Ku70/Ku80 beta-barrel domain RBRH_RS01105 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RBRH_RS01110 PF13953 PapC C-terminal domain RBRH_RS01110 PF00577 Outer membrane usher protein RBRH_RS01110 PF13954 PapC N-terminal domain RBRH_RS01120 PF01810 LysE type translocator RBRH_RS01125 PF01118 Semialdehyde dehydrogenase, NAD binding domain RBRH_RS01130 PF01161 Phosphatidylethanolamine-binding protein RBRH_RS01135 PF00156 Phosphoribosyl transferase domain RBRH_RS01140 PF03949 Malic enzyme, NAD binding domain RBRH_RS01140 PF01515 Phosphate acetyl/butaryl transferase RBRH_RS01140 PF00390 Malic enzyme, N-terminal domain RBRH_RS01155 PF00440 Bacterial regulatory proteins, tetR family RBRH_RS01165 PF00111 2Fe-2S iron-sulfur cluster binding domain RBRH_RS01165 PF00970 Oxidoreductase FAD-binding domain RBRH_RS01165 PF00175 Oxidoreductase NAD-binding domain RBRH_RS01170 PF01883 Iron-sulfur cluster assembly protein RBRH_RS01175 PF05138 Phenylacetic acid catabolic protein RBRH_RS01180 PF06243 Phenylacetic acid degradation B RBRH_RS01185 PF05138 Phenylacetic acid catabolic protein RBRH_RS01215 PF01546 Peptidase family M20/M25/M40 RBRH_RS01215 PF07687 Peptidase dimerisation domain RBRH_RS01225 PF03895 YadA-like membrane anchor domain RBRH_RS01225 PF05662 Coiled stalk of trimeric autotransporter adhesin RBRH_RS01225 PF13018 Extended Signal Peptide of Type V secretion system RBRH_RS01225 PF15401 Tryptophan-ring motif of head of Trimeric autotransporter adhesin RBRH_RS01230 PF13193 AMP-binding enzyme C-terminal domain RBRH_RS01230 PF00501 AMP-binding enzyme RBRH_RS01235 PF13609 Gram-negative porin RBRH_RS01240 PF03232 Ubiquinone biosynthesis protein COQ7 RBRH_RS01245 PF02381 MraZ protein, putative antitoxin-like RBRH_RS01250 PF01795 MraW methylase family RBRH_RS01255 PF04999 Cell division protein FtsL RBRH_RS01260 PF00905 Penicillin binding protein transpeptidase domain RBRH_RS01260 PF03717 Penicillin-binding Protein dimerisation domain RBRH_RS01265 PF08245 Mur ligase middle domain RBRH_RS01265 PF02875 Mur ligase family, glutamate ligase domain RBRH_RS01270 PF08245 Mur ligase middle domain RBRH_RS01270 PF02875 Mur ligase family, glutamate ligase domain RBRH_RS01270 PF01225 Mur ligase family, catalytic domain RBRH_RS01275 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 RBRH_RS01275 PF00953 Glycosyl transferase family 4 RBRH_RS01280 PF02875 Mur ligase family, glutamate ligase domain RBRH_RS01280 PF08245 Mur ligase middle domain RBRH_RS01285 PF01098 Cell cycle protein RBRH_RS01290 PF04101 Glycosyltransferase family 28 C-terminal domain RBRH_RS01290 PF03033 Glycosyltransferase family 28 N-terminal domain RBRH_RS01295 PF01225 Mur ligase family, catalytic domain RBRH_RS01295 PF08245 Mur ligase middle domain RBRH_RS01295 PF02875 Mur ligase family, glutamate ligase domain RBRH_RS01300 PF01820 D-ala D-ala ligase N-terminus RBRH_RS01300 PF07478 D-ala D-ala ligase C-terminus RBRH_RS01305 PF08478 POTRA domain, FtsQ-type RBRH_RS01305 PF03799 Cell division protein FtsQ RBRH_RS01310 PF02491 SHS2 domain inserted in FTSA RBRH_RS01315 PF00091 Tubulin/FtsZ family, GTPase domain RBRH_RS01315 PF12327 FtsZ family, C-terminal domain RBRH_RS01325 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase RBRH_RS01335 PF07516 SecA Wing and Scaffold domain RBRH_RS01335 PF01043 SecA preprotein cross-linking domain RBRH_RS01335 PF07517 SecA DEAD-like domain RBRH_RS01335 PF02810 SEC-C motif RBRH_RS01340 PF01960 ArgJ family RBRH_RS01350 PF00293 NUDIX domain RBRH_RS01355 PF03884 DNA gyrase inhibitor YacG RBRH_RS01360 PF07072 Cell division protein RBRH_RS01365 PF01121 Dephospho-CoA kinase RBRH_RS01370 PF01478 Type IV leader peptidase family RBRH_RS01370 PF06750 Bacterial Peptidase A24 N-terminal domain RBRH_RS01375 PF00482 Type II secretion system (T2SS), protein F RBRH_RS01380 PF00437 Type II/IV secretion system protein RBRH_RS01380 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain RBRH_RS01385 PF00571 CBS domain RBRH_RS01385 PF01595 Cyclin M transmembrane N-terminal domain RBRH_RS01385 PF03471 Transporter associated domain RBRH_RS01400 PF00348 Polyprenyl synthetase RBRH_RS01405 PF00829 Ribosomal prokaryotic L21 protein RBRH_RS01410 PF01016 Ribosomal L27 protein RBRH_RS01415 PF01018 GTP1/OBG RBRH_RS01415 PF01926 50S ribosome-binding GTPase RBRH_RS01420 PF00696 Amino acid kinase family RBRH_RS01420 PF01472 PUA domain RBRH_RS01430 PF00293 NUDIX domain RBRH_RS01435 PF04073 Aminoacyl-tRNA editing domain RBRH_RS01435 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RBRH_RS01435 PF03129 Anticodon binding domain RBRH_RS01440 PF01914 MarC family integral membrane protein RBRH_RS01445 PF00156 Phosphoribosyl transferase domain RBRH_RS01450 PF00448 SRP54-type protein, GTPase domain RBRH_RS01450 PF02881 SRP54-type protein, helical bundle domain RBRH_RS01450 PF02978 Signal peptide binding domain RBRH_RS01455 PF01578 Cytochrome C assembly protein RBRH_RS01465 PF01510 N-acetylmuramoyl-L-alanine amidase RBRH_RS01470 PF00317 Ribonucleotide reductase, all-alpha domain RBRH_RS01470 PF02867 Ribonucleotide reductase, barrel domain RBRH_RS01470 PF03477 ATP cone domain RBRH_RS01480 PF00268 Ribonucleotide reductase, small chain RBRH_RS01500 PF08534 Redoxin RBRH_RS01510 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RBRH_RS01510 PF02785 Biotin carboxylase C-terminal domain RBRH_RS01510 PF00289 Biotin carboxylase, N-terminal domain RBRH_RS01515 PF00364 Biotin-requiring enzyme RBRH_RS01520 PF01220 Dehydroquinase class II RBRH_RS01525 PF08534 Redoxin RBRH_RS01535 PF08245 Mur ligase middle domain RBRH_RS01535 PF01225 Mur ligase family, catalytic domain RBRH_RS01535 PF02875 Mur ligase family, glutamate ligase domain RBRH_RS01540 PF05728 Uncharacterised protein family (UPF0227) RBRH_RS01545 PF00773 RNB domain RBRH_RS01550 PF18317 Shikimate 5'-dehydrogenase C-terminal domain RBRH_RS01550 PF01488 Shikimate / quinate 5-dehydrogenase RBRH_RS01550 PF08501 Shikimate dehydrogenase substrate binding domain RBRH_RS01555 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family RBRH_RS01560 PF02464 Competence-damaged protein RBRH_RS01565 PF04608 Phosphatidylglycerophosphatase A RBRH_RS01570 PF00586 AIR synthase related protein, N-terminal domain RBRH_RS01570 PF02769 AIR synthase related protein, C-terminal domain RBRH_RS01575 PF00390 Malic enzyme, N-terminal domain RBRH_RS01575 PF03949 Malic enzyme, NAD binding domain RBRH_RS01575 PF01515 Phosphate acetyl/butaryl transferase RBRH_RS01590 PF04452 RNA methyltransferase RBRH_RS01595 PF17284 Spermidine synthase tetramerisation domain RBRH_RS01600 PF02780 Transketolase, C-terminal domain RBRH_RS01600 PF00456 Transketolase, thiamine diphosphate binding domain RBRH_RS01600 PF02779 Transketolase, pyrimidine binding domain RBRH_RS01610 PF01475 Ferric uptake regulator family RBRH_RS01615 PF04355 SmpA / OmlA family RBRH_RS01620 PF05173 Dihydrodipicolinate reductase, C-terminus RBRH_RS01620 PF01113 Dihydrodipicolinate reductase, N-terminus RBRH_RS01630 PF09334 tRNA synthetases class I (M) RBRH_RS01630 PF13603 Leucyl-tRNA synthetase, Domain 2 RBRH_RS01630 PF00133 tRNA synthetases class I (I, L, M and V) RBRH_RS01630 PF08264 Anticodon-binding domain of tRNA RBRH_RS01645 PF00171 Aldehyde dehydrogenase family RBRH_RS01650 PF03653 Uncharacterised protein family (UPF0093) RBRH_RS01655 PF02685 Glucokinase RBRH_RS01655 PF01380 SIS domain RBRH_RS01655 PF01418 Helix-turn-helix domain, rpiR family RBRH_RS01665 PF01081 KDPG and KHG aldolase RBRH_RS01670 PF02447 GntP family permease RBRH_RS01685 PF01202 Shikimate kinase RBRH_RS01690 PF00206 Lyase RBRH_RS01690 PF08328 Adenylosuccinate lyase C-terminal RBRH_RS01705 PF00293 NUDIX domain RBRH_RS01710 PF01170 Putative RNA methylase family UPF0020 RBRH_RS01710 PF02926 THUMP domain RBRH_RS01715 PF02699 Preprotein translocase subunit RBRH_RS01720 PF07549 SecD/SecF GG Motif RBRH_RS01720 PF13721 SecD export protein N-terminal TM region RBRH_RS01720 PF02355 Protein export membrane protein RBRH_RS01725 PF07549 SecD/SecF GG Motif RBRH_RS01725 PF02355 Protein export membrane protein RBRH_RS01730 PF07690 Major Facilitator Superfamily RBRH_RS01740 PF04403 Paraquat-inducible protein A RBRH_RS01745 PF04403 Paraquat-inducible protein A RBRH_RS01750 PF02470 MlaD protein RBRH_RS01760 PF01702 Queuine tRNA-ribosyltransferase RBRH_RS01765 PF02547 Queuosine biosynthesis protein RBRH_RS01770 PF17191 RecG wedge domain RBRH_RS01770 PF00271 Helicase conserved C-terminal domain RBRH_RS01770 PF00270 DEAD/DEAH box helicase RBRH_RS01775 PF03466 LysR substrate binding domain RBRH_RS01775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RBRH_RS01780 PF01040 UbiA prenyltransferase family RBRH_RS01785 PF14748 Pyrroline-5-carboxylate reductase dimerisation RBRH_RS01785 PF03807 NADP oxidoreductase coenzyme F420-dependent RBRH_RS01790 PF01168 Alanine racemase, N-terminal domain RBRH_RS01795 PF02754 Cysteine-rich domain RBRH_RS01795 PF13183 4Fe-4S dicluster domain RBRH_RS01800 PF01565 FAD binding domain RBRH_RS01805 PF01565 FAD binding domain RBRH_RS01805 PF02913 FAD linked oxidases, C-terminal domain RBRH_RS01810 PF02913 FAD linked oxidases, C-terminal domain RBRH_RS01810 PF01565 FAD binding domain RBRH_RS01815 PF01923 Cobalamin adenosyltransferase RBRH_RS01820 PF00793 DAHP synthetase I family RBRH_RS01825 PF01523 Putative modulator of DNA gyrase RBRH_RS01830 PF00795 Carbon-nitrogen hydrolase RBRH_RS01840 PF03710 Glutamate-ammonia ligase adenylyltransferase RBRH_RS01840 PF08335 GlnD PII-uridylyltransferase RBRH_RS01845 PF02463 RecF/RecN/SMC N terminal domain RBRH_RS01850 PF01513 ATP-NAD kinase RBRH_RS01855 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding RBRH_RS01855 PF01628 HrcA protein C terminal domain RBRH_RS01860 PF00762 Ferrochelatase RBRH_RS01865 PF01479 S4 domain RBRH_RS01875 PF01025 GrpE RBRH_RS01880 PF00012 Hsp70 protein RBRH_RS01885 PF00226 DnaJ domain RBRH_RS01885 PF01556 DnaJ C terminal domain RBRH_RS01885 PF00684 DnaJ central domain RBRH_RS01890 PF00425 chorismate binding enzyme RBRH_RS01890 PF04715 Anthranilate synthase component I, N terminal region RBRH_RS01895 PF02548 Ketopantoate hydroxymethyltransferase RBRH_RS01900 PF01712 Deoxynucleoside kinase RBRH_RS01905 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) RBRH_RS01910 PF12626 Polymerase A arginine-rich C-terminus RBRH_RS01910 PF12627 Probable RNA and SrmB- binding site of polymerase A RBRH_RS01910 PF01743 Poly A polymerase head domain RBRH_RS01920 PF00308 Bacterial dnaA protein RBRH_RS01925 PF02769 AIR synthase related protein, C-terminal domain RBRH_RS01925 PF00586 AIR synthase related protein, N-terminal domain RBRH_RS01935 PF01119 DNA mismatch repair protein, C-terminal domain RBRH_RS01935 PF08676 MutL C terminal dimerisation domain RBRH_RS01940 PF09335 SNARE associated Golgi protein RBRH_RS01945 PF01520 N-acetylmuramoyl-L-alanine amidase RBRH_RS01945 PF11741 AMIN domain RBRH_RS01950 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE RBRH_RS01955 PF08331 Domain of unknown function (DUF1730) RBRH_RS01965 PF00589 Phage integrase family RBRH_RS01965 PF02899 Phage integrase, N-terminal SAM-like domain RBRH_RS01980 PF02384 N-6 DNA Methylase RBRH_RS01985 PF09572 XamI restriction endonuclease RBRH_RS01990 PF04073 Aminoacyl-tRNA editing domain RBRH_RS01995 PF02660 Glycerol-3-phosphate acyltransferase RBRH_RS02000 PF04461 Protein of unknown function (DUF520) RBRH_RS02005 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain RBRH_RS02005 PF01565 FAD binding domain RBRH_RS02010 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RBRH_RS02010 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RBRH_RS02020 PF01649 Ribosomal protein S20 RBRH_RS02025 PF03023 Lipid II flippase MurJ RBRH_RS02030 PF13369 Transglutaminase-like superfamily RBRH_RS02035 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB RBRH_RS02035 PF17287 POTRA domain RBRH_RS02035 PF08479 POTRA domain, ShlB-type RBRH_RS02040 PF05594 Haemagluttinin repeat RBRH_RS02040 PF05860 haemagglutination activity domain RBRH_RS02040 PF13332 Hemagglutinin repeat RBRH_RS02040 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain RBRH_RS02040 PF13018 Extended Signal Peptide of Type V secretion system RBRH_RS02050 PF13018 Extended Signal Peptide of Type V secretion system RBRH_RS02050 PF05860 haemagglutination activity domain RBRH_RS02050 PF13332 Hemagglutinin repeat RBRH_RS02050 PF05594 Haemagluttinin repeat RBRH_RS02050 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain RBRH_RS02155 PF05191 Adenylate kinase, active site lid RBRH_RS02160 PF02348 Cytidylyltransferase RBRH_RS02165 PF03966 Trm112p-like protein RBRH_RS02175 PF02601 Exonuclease VII, large subunit RBRH_RS02175 PF13742 OB-fold nucleic acid binding domain RBRH_RS02180 PF02777 Iron/manganese superoxide dismutases, C-terminal domain RBRH_RS02180 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain RBRH_RS02185 PF07690 Major Facilitator Superfamily RBRH_RS02190 PF14492 Elongation Factor G, domain II RBRH_RS02190 PF03144 Elongation factor Tu domain 2 RBRH_RS02190 PF00679 Elongation factor G C-terminus RBRH_RS02190 PF00009 Elongation factor Tu GTP binding domain RBRH_RS02190 PF03764 Elongation factor G, domain IV RBRH_RS02205 PF00849 RNA pseudouridylate synthase RBRH_RS02210 PF00180 Isocitrate/isopropylmalate dehydrogenase RBRH_RS02220 PF07715 TonB-dependent Receptor Plug Domain RBRH_RS02220 PF00593 TonB dependent receptor RBRH_RS02225 PF00313 'Cold-shock' DNA-binding domain RBRH_RS02230 PF02617 ATP-dependent Clp protease adaptor protein ClpS RBRH_RS02235 PF07724 AAA domain (Cdc48 subfamily) RBRH_RS02235 PF17871 AAA lid domain RBRH_RS02235 PF02861 Clp amino terminal domain, pathogenicity island component RBRH_RS02235 PF10431 C-terminal, D2-small domain, of ClpB protein RBRH_RS02235 PF00004 ATPase family associated with various cellular activities (AAA) RBRH_RS02240 PF00692 dUTPase RBRH_RS02250 PF02441 Flavoprotein RBRH_RS02250 PF04127 DNA / pantothenate metabolism flavoprotein RBRH_RS02255 PF01252 Signal peptidase (SPase) II RBRH_RS02260 PF06827 Zinc finger found in FPG and IleRS RBRH_RS02260 PF08264 Anticodon-binding domain of tRNA RBRH_RS02260 PF00133 tRNA synthetases class I (I, L, M and V) RBRH_RS02265 PF01687 Riboflavin kinase RBRH_RS02265 PF06574 FAD synthetase RBRH_RS02270 PF00551 Formyl transferase RBRH_RS02275 PF01189 16S rRNA methyltransferase RsmB/F RBRH_RS02275 PF01029 NusB family RBRH_RS02280 PF12795 Mechanosensitive ion channel porin domain RBRH_RS02280 PF12794 Mechanosensitive ion channel inner membrane domain 1 RBRH_RS02280 PF00924 Mechanosensitive ion channel RBRH_RS02290 PF02445 Quinolinate synthetase A protein RBRH_RS02295 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain RBRH_RS02295 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain RBRH_RS02300 PF00890 FAD binding domain RBRH_RS02300 PF02910 Fumarate reductase flavoprotein C-term RBRH_RS02305 PF00471 Ribosomal protein L33 RBRH_RS02310 PF00830 Ribosomal L28 family RBRH_RS02315 PF04002 RadC-like JAB domain RBRH_RS02320 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RBRH_RS02325 PF02401 LytB protein RBRH_RS02335 PF02653 Branched-chain amino acid transport system / permease component RBRH_RS02340 PF02653 Branched-chain amino acid transport system / permease component RBRH_RS02340 PF11862 Domain of unknown function (DUF3382) RBRH_RS02345 PF12399 Branched-chain amino acid ATP-binding cassette transporter RBRH_RS02345 PF00005 ABC transporter RBRH_RS02350 PF00005 ABC transporter RBRH_RS02355 PF00202 Aminotransferase class-III RBRH_RS02360 PF00111 2Fe-2S iron-sulfur cluster binding domain RBRH_RS02360 PF00175 Oxidoreductase NAD-binding domain RBRH_RS02360 PF00970 Oxidoreductase FAD-binding domain RBRH_RS02380 PF00849 RNA pseudouridylate synthase RBRH_RS02380 PF01479 S4 domain RBRH_RS02385 PF01595 Cyclin M transmembrane N-terminal domain RBRH_RS02385 PF03471 Transporter associated domain RBRH_RS02385 PF00571 CBS domain RBRH_RS02395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RBRH_RS02395 PF03466 LysR substrate binding domain RBRH_RS02410 PF01507 Phosphoadenosine phosphosulfate reductase family RBRH_RS02415 PF01507 Phosphoadenosine phosphosulfate reductase family RBRH_RS02420 PF03144 Elongation factor Tu domain 2 RBRH_RS02420 PF00009 Elongation factor Tu GTP binding domain RBRH_RS02425 PF14824 Sirohaem biosynthesis protein central RBRH_RS02425 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RBRH_RS02425 PF10414 Sirohaem synthase dimerisation region RBRH_RS02445 PF03739 Lipopolysaccharide export system permease LptF/LptG RBRH_RS02450 PF02789 Cytosol aminopeptidase family, N-terminal domain RBRH_RS02450 PF00883 Cytosol aminopeptidase family, catalytic domain RBRH_RS02465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RBRH_RS02465 PF03466 LysR substrate binding domain RBRH_RS02470 PF01790 Prolipoprotein diacylglyceryl transferase RBRH_RS02485 PF05164 Cell division protein ZapA RBRH_RS02495 PF07715 TonB-dependent Receptor Plug Domain RBRH_RS02495 PF00593 TonB dependent receptor RBRH_RS02500 PF01032 FecCD transport family RBRH_RS02505 PF00005 ABC transporter RBRH_RS02510 PF01497 Periplasmic binding protein RBRH_RS02525 PF02261 Aspartate decarboxylase RBRH_RS02530 PF02569 Pantoate-beta-alanine ligase RBRH_RS02535 PF02616 Segregation and condensation protein ScpA RBRH_RS02555 PF04357 TamB, inner membrane protein subunit of TAM complex RBRH_RS02560 PF01588 Putative tRNA binding domain RBRH_RS02560 PF09334 tRNA synthetases class I (M) RBRH_RS02560 PF08264 Anticodon-binding domain of tRNA RBRH_RS02565 PF00691 OmpA family RBRH_RS02565 PF05736 OprF membrane domain RBRH_RS02585 PF00692 dUTPase RBRH_RS02590 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain RBRH_RS02590 PF01276 Orn/Lys/Arg decarboxylase, major domain RBRH_RS02590 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain RBRH_RS02605 PF00311 Phosphoenolpyruvate carboxylase RBRH_RS02610 PF02602 Uroporphyrinogen-III synthase HemD RBRH_RS02620 PF00719 Inorganic pyrophosphatase RBRH_RS02630 PF01541 GIY-YIG catalytic domain RBRH_RS02640 PF00795 Carbon-nitrogen hydrolase RBRH_RS02640 PF02540 NAD synthase RBRH_RS02645 PF00543 Nitrogen regulatory protein P-II RBRH_RS02650 PF01713 Smr domain RBRH_RS02650 PF00488 MutS domain V RBRH_RS02655 PF07992 Pyridine nucleotide-disulphide oxidoreductase RBRH_RS02660 PF01580 FtsK/SpoIIIE family RBRH_RS02660 PF09397 Ftsk gamma domain RBRH_RS02660 PF13491 4TM region of DNA translocase FtsK/SpoIIIE RBRH_RS02660 PF17854 FtsK alpha domain RBRH_RS02665 PF03548 Outer membrane lipoprotein carrier protein LolA RBRH_RS02670 PF12002 MgsA AAA+ ATPase C terminal RBRH_RS02670 PF16193 AAA C-terminal domain RBRH_RS02670 PF00004 ATPase family associated with various cellular activities (AAA) RBRH_RS02675 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RBRH_RS02675 PF02403 Seryl-tRNA synthetase N-terminal domain RBRH_RS02690 PF05209 Septum formation inhibitor MinC, N-terminal domain RBRH_RS02690 PF03775 Septum formation inhibitor MinC, C-terminal domain RBRH_RS02695 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RBRH_RS02700 PF03776 Septum formation topological specificity factor MinE RBRH_RS02730 PF04055 Radical SAM superfamily RBRH_RS02730 PF06969 HemN C-terminal domain RBRH_RS02735 PF01725 Ham1 family RBRH_RS02740 PF01138 3' exoribonuclease family, domain 1 RBRH_RS02740 PF03725 3' exoribonuclease family, domain 2 RBRH_RS02750 PF00625 Guanylate kinase RBRH_RS02755 PF01192 RNA polymerase Rpb6 RBRH_RS02760 PF13291 ACT domain RBRH_RS02760 PF04607 Region found in RelA / SpoT proteins RBRH_RS02760 PF02824 TGS domain RBRH_RS02775 PF13609 Gram-negative porin RBRH_RS02785 PF00313 'Cold-shock' DNA-binding domain RBRH_RS02810 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain RBRH_RS02815 PF11940 Domain of unknown function (DUF3458) Ig-like fold RBRH_RS02815 PF17432 Domain of unknown function (DUF3458_C) ARM repeats RBRH_RS02815 PF01433 Peptidase family M1 domain RBRH_RS02825 PF01169 Uncharacterized protein family UPF0016 RBRH_RS02830 PF01979 Amidohydrolase family RBRH_RS02835 PF00860 Permease family RBRH_RS02840 PF00962 Adenosine/AMP deaminase RBRH_RS02845 PF02600 Disulfide bond formation protein DsbB RBRH_RS02850 PF01425 Amidase RBRH_RS02855 PF07722 Peptidase C26 RBRH_RS02860 PF07690 Major Facilitator Superfamily RBRH_RS02870 PF01494 FAD binding domain RBRH_RS02875 PF02537 CrcB-like protein, Camphor Resistance (CrcB) RBRH_RS02885 PF01568 Molydopterin dinucleotide binding domain RBRH_RS02885 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RBRH_RS02885 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RBRH_RS02885 PF00384 Molybdopterin oxidoreductase RBRH_RS02885 PF00037 4Fe-4S binding domain RBRH_RS02890 PF00037 4Fe-4S binding domain RBRH_RS02890 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit RBRH_RS02890 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region RBRH_RS02900 PF12728 Helix-turn-helix domain RBRH_RS02900 PF12727 PBP superfamily domain RBRH_RS02920 PF13419 Haloacid dehalogenase-like hydrolase RBRH_RS02935 PF00521 DNA gyrase/topoisomerase IV, subunit A RBRH_RS02935 PF03989 DNA gyrase C-terminal domain, beta-propeller RBRH_RS02945 PF00266 Aminotransferase class-V RBRH_RS02950 PF00800 Prephenate dehydratase RBRH_RS02950 PF01817 Chorismate mutase type II RBRH_RS02950 PF01842 ACT domain RBRH_RS02955 PF01842 ACT domain RBRH_RS02955 PF02153 Prephenate dehydrogenase RBRH_RS02960 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RBRH_RS02965 PF02224 Cytidylate kinase RBRH_RS02970 PF00575 S1 RNA binding domain RBRH_RS02975 PF00216 Bacterial DNA-binding protein RBRH_RS02985 PF18073 Rubredoxin metal binding domain RBRH_RS02990 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain RBRH_RS02990 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain RBRH_RS02990 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain RBRH_RS02995 PF00294 pfkB family carbohydrate kinase RBRH_RS03000 PF01370 NAD dependent epimerase/dehydratase family RBRH_RS03010 PF00291 Pyridoxal-phosphate dependent enzyme RBRH_RS03015 PF13406 Transglycosylase SLT domain RBRH_RS03020 PF00850 Histone deacetylase domain RBRH_RS03025 PF00005 ABC transporter RBRH_RS03025 PF09383 NIL domain RBRH_RS03030 PF00528 Binding-protein-dependent transport system inner membrane component RBRH_RS03035 PF03180 NLPA lipoprotein RBRH_RS03040 PF01012 Electron transfer flavoprotein domain RBRH_RS03045 PF01012 Electron transfer flavoprotein domain RBRH_RS03045 PF00766 Electron transfer flavoprotein FAD-binding domain RBRH_RS03050 PF01266 FAD dependent oxidoreductase RBRH_RS03055 PF01037 Lrp/AsnC ligand binding domain RBRH_RS03075 PF00886 Ribosomal protein S16 RBRH_RS03080 PF05239 PRC-barrel domain RBRH_RS03080 PF01782 RimM N-terminal domain RBRH_RS03085 PF01746 tRNA (Guanine-1)-methyltransferase RBRH_RS03090 PF01245 Ribosomal protein L19 RBRH_RS03095 PF00293 NUDIX domain RBRH_RS03100 PF17113 Regulatory signalling modulator protein AmpE RBRH_RS03100 PF03186 CobD/Cbib protein RBRH_RS03110 PF03193 RsgA GTPase RBRH_RS03115 PF01435 Peptidase family M48 RBRH_RS03120 PF00929 Exonuclease RBRH_RS03125 PF00994 Probable molybdopterin binding domain RBRH_RS03130 PF04751 Protein of unknown function (DUF615) RBRH_RS03135 PF01523 Putative modulator of DNA gyrase RBRH_RS03140 PF00186 Dihydrofolate reductase RBRH_RS03145 PF00303 Thymidylate synthase RBRH_RS03150 PF00206 Lyase RBRH_RS03150 PF10415 Fumarase C C-terminus RBRH_RS03155 PF13091 PLD-like domain RBRH_RS03160 PF01554 MatE RBRH_RS03175 PF05981 CreA protein RBRH_RS03200 PF00037 4Fe-4S binding domain RBRH_RS03200 PF11953 Domain of unknown function (DUF3470) RBRH_RS03210 PF13183 4Fe-4S dicluster domain RBRH_RS03210 PF11870 Domain of unknown function (DUF3390) RBRH_RS03210 PF02589 LUD domain RBRH_RS03225 PF02646 RmuC family RBRH_RS03235 PF00994 Probable molybdopterin binding domain RBRH_RS03235 PF03454 MoeA C-terminal region (domain IV) RBRH_RS03235 PF03453 MoeA N-terminal region (domain I and II) RBRH_RS03240 PF12804 MobA-like NTP transferase domain RBRH_RS03245 PF06463 Molybdenum Cofactor Synthesis C RBRH_RS03245 PF04055 Radical SAM superfamily RBRH_RS03250 PF00575 S1 RNA binding domain RBRH_RS03250 PF10150 Ribonuclease E/G family RBRH_RS03250 PF12111 Polyribonucleotide phosphorylase C terminal RBRH_RS03265 PF01479 S4 domain RBRH_RS03265 PF00849 RNA pseudouridylate synthase RBRH_RS03270 PF13419 Haloacid dehalogenase-like hydrolase RBRH_RS03280 PF01343 Peptidase family S49 RBRH_RS03285 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RBRH_RS03300 PF01783 Ribosomal L32p protein family RBRH_RS03305 PF02504 Fatty acid synthesis protein RBRH_RS03310 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal RBRH_RS03310 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RBRH_RS03315 PF00698 Acyl transferase domain RBRH_RS03325 PF00550 Phosphopantetheine attachment site RBRH_RS03330 PF00109 Beta-ketoacyl synthase, N-terminal domain RBRH_RS03330 PF02801 Beta-ketoacyl synthase, C-terminal domain RBRH_RS03340 PF08281 Sigma-70, region 4 RBRH_RS03340 PF04542 Sigma-70 region 2 RBRH_RS03355 PF13180 PDZ domain RBRH_RS03365 PF06421 GTP-binding protein LepA C-terminus RBRH_RS03365 PF00679 Elongation factor G C-terminus RBRH_RS03365 PF00009 Elongation factor Tu GTP binding domain RBRH_RS03365 PF03144 Elongation factor Tu domain 2 RBRH_RS03370 PF10502 Signal peptidase, peptidase S26 RBRH_RS03375 PF14622 Ribonuclease-III-like RBRH_RS03375 PF00035 Double-stranded RNA binding motif RBRH_RS03380 PF01926 50S ribosome-binding GTPase RBRH_RS03380 PF07650 KH domain RBRH_RS03385 PF02565 Recombination protein O C terminal RBRH_RS03385 PF11967 Recombination protein O N terminal RBRH_RS03390 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ RBRH_RS03395 PF01648 4'-phosphopantetheinyl transferase superfamily RBRH_RS03400 PF00933 Glycosyl hydrolase family 3 N terminal domain RBRH_RS03410 PF09285 Elongation factor P, C-terminal RBRH_RS03410 PF08207 Elongation factor P (EF-P) KOW-like domain RBRH_RS03410 PF01132 Elongation factor P (EF-P) OB domain RBRH_RS03420 PF01541 GIY-YIG catalytic domain RBRH_RS03420 PF08459 UvrC Helix-hairpin-helix N-terminal RBRH_RS03420 PF02151 UvrB/uvrC motif RBRH_RS03425 PF01066 CDP-alcohol phosphatidyltransferase RBRH_RS03445 PF13673 Acetyltransferase (GNAT) domain RBRH_RS03455 PF02630 SCO1/SenC RBRH_RS03460 PF02358 Trehalose-phosphatase RBRH_RS03465 PF00982 Glycosyltransferase family 20 RBRH_RS03475 PF13439 Glycosyltransferase Family 4 RBRH_RS03475 PF00534 Glycosyl transferases group 1 RBRH_RS03550 PF00929 Exonuclease RBRH_RS03555 PF00075 RNase H RBRH_RS03560 PF08241 Methyltransferase domain RBRH_RS03565 PF00753 Metallo-beta-lactamase superfamily RBRH_RS03565 PF16123 Hydroxyacylglutathione hydrolase C-terminus RBRH_RS03570 PF01464 Transglycosylase SLT domain RBRH_RS03570 PF01476 LysM domain RBRH_RS03575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RBRH_RS03575 PF03466 LysR substrate binding domain RBRH_RS03585 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain RBRH_RS03585 PF00117 Glutamine amidotransferase class-I RBRH_RS03595 PF01272 Transcription elongation factor, GreA/GreB, C-term RBRH_RS03595 PF03449 Transcription elongation factor, N-terminal RBRH_RS03605 PF01985 CRS1 / YhbY (CRM) domain RBRH_RS03610 PF01728 FtsJ-like methyltransferase RBRH_RS03615 PF00004 ATPase family associated with various cellular activities (AAA) RBRH_RS03615 PF01434 Peptidase family M41 RBRH_RS03615 PF06480 FtsH Extracellular RBRH_RS03615 PF17862 AAA+ lid domain RBRH_RS03620 PF00809 Pterin binding enzyme RBRH_RS03625 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RBRH_RS03625 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RBRH_RS03625 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RBRH_RS03625 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RBRH_RS03630 PF12849 PBP superfamily domain RBRH_RS03635 PF00528 Binding-protein-dependent transport system inner membrane component RBRH_RS03640 PF00528 Binding-protein-dependent transport system inner membrane component RBRH_RS03645 PF00005 ABC transporter RBRH_RS03650 PF01895 PhoU domain RBRH_RS03655 PF00486 Transcriptional regulatory protein, C terminal RBRH_RS03655 PF00072 Response regulator receiver domain RBRH_RS03660 PF11808 Phosphate regulon sensor protein PhoR RBRH_RS03660 PF00989 PAS fold RBRH_RS03660 PF00512 His Kinase A (phospho-acceptor) domain RBRH_RS03660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RBRH_RS03665 PF02541 Ppx/GppA phosphatase family RBRH_RS03675 PF01037 Lrp/AsnC ligand binding domain RBRH_RS03680 PF01613 Flavin reductase like domain RBRH_RS03685 PF01625 Peptide methionine sulfoxide reductase RBRH_RS03700 PF01243 Pyridoxamine 5'-phosphate oxidase RBRH_RS03700 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region RBRH_RS03705 PF00899 ThiF family RBRH_RS03715 PF05726 Pirin C-terminal cupin domain RBRH_RS03715 PF02678 Pirin RBRH_RS03725 PF00892 EamA-like transporter family RBRH_RS03730 PF00749 tRNA synthetases class I (E and Q), catalytic domain RBRH_RS03730 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain RBRH_RS03735 PF05433 Glycine zipper 2TM domain RBRH_RS03750 PF02272 DHHA1 domain RBRH_RS03750 PF01411 tRNA synthetases class II (A) RBRH_RS03750 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RBRH_RS03760 PF02653 Branched-chain amino acid transport system / permease component RBRH_RS03765 PF00005 ABC transporter RBRH_RS03765 PF12399 Branched-chain amino acid ATP-binding cassette transporter RBRH_RS03770 PF00005 ABC transporter RBRH_RS03775 PF01206 Sulfurtransferase TusA RBRH_RS03780 PF00483 Nucleotidyl transferase RBRH_RS03785 PF08264 Anticodon-binding domain of tRNA RBRH_RS03785 PF10458 Valyl tRNA synthetase tRNA binding arm RBRH_RS03785 PF00133 tRNA synthetases class I (I, L, M and V) RBRH_RS03790 PF00580 UvrD/REP helicase N-terminal domain RBRH_RS03790 PF13361 UvrD-like helicase C-terminal domain RBRH_RS03800 PF01636 Phosphotransferase enzyme family RBRH_RS03810 PF01048 Phosphorylase superfamily RBRH_RS03810 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus RBRH_RS03900 PF04221 RelB antitoxin RBRH_RS04100 PF01381 Helix-turn-helix RBRH_RS04120 PF03641 Possible lysine decarboxylase RBRH_RS04125 PF01612 3'-5' exonuclease RBRH_RS04125 PF00476 DNA polymerase family A RBRH_RS04125 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain RBRH_RS04125 PF01367 5'-3' exonuclease, C-terminal SAM fold RBRH_RS04130 PF07992 Pyridine nucleotide-disulphide oxidoreductase RBRH_RS04135 PF00581 Rhodanese-like domain RBRH_RS04150 PF02609 Exonuclease VII small subunit RBRH_RS04155 PF00348 Polyprenyl synthetase RBRH_RS04160 PF02780 Transketolase, C-terminal domain RBRH_RS04160 PF02779 Transketolase, pyrimidine binding domain RBRH_RS04160 PF13292 1-deoxy-D-xylulose-5-phosphate synthase RBRH_RS04165 PF02649 Type I GTP cyclohydrolase folE2 RBRH_RS04170 PF00814 Glycoprotease family RBRH_RS04180 PF01165 Ribosomal protein S21 RBRH_RS04190 PF01807 CHC2 zinc finger RBRH_RS04190 PF10410 DnaB-helicase binding domain of primase RBRH_RS04190 PF08278 DNA primase DnaG DnaB-binding RBRH_RS04190 PF08275 DNA primase catalytic core, N-terminal domain RBRH_RS04195 PF04542 Sigma-70 region 2 RBRH_RS04195 PF00140 Sigma-70 factor, region 1.2 RBRH_RS04195 PF04539 Sigma-70 region 3 RBRH_RS04195 PF04546 Sigma-70, non-essential region RBRH_RS04195 PF03979 Sigma-70 factor, region 1.1 RBRH_RS04195 PF04545 Sigma-70, region 4 RBRH_RS04305 PF03143 Elongation factor Tu C-terminal domain RBRH_RS04305 PF00009 Elongation factor Tu GTP binding domain RBRH_RS04305 PF03144 Elongation factor Tu domain 2 RBRH_RS04315 PF00584 SecE/Sec61-gamma subunits of protein translocation complex RBRH_RS04320 PF02357 Transcription termination factor nusG RBRH_RS04320 PF00467 KOW motif RBRH_RS04330 PF00687 Ribosomal protein L1p/L10e family RBRH_RS04335 PF00466 Ribosomal protein L10 RBRH_RS04340 PF16320 Ribosomal protein L7/L12 dimerisation domain RBRH_RS04340 PF00542 Ribosomal protein L7/L12 C-terminal domain RBRH_RS04350 PF04997 RNA polymerase Rpb1, domain 1 RBRH_RS04350 PF04998 RNA polymerase Rpb1, domain 5 RBRH_RS04350 PF05000 RNA polymerase Rpb1, domain 4 RBRH_RS04350 PF04983 RNA polymerase Rpb1, domain 3 RBRH_RS04350 PF00623 RNA polymerase Rpb1, domain 2 RBRH_RS04365 PF00270 DEAD/DEAH box helicase RBRH_RS04365 PF09382 RQC domain RBRH_RS04365 PF16124 RecQ zinc-binding RBRH_RS04365 PF00570 HRDC domain RBRH_RS04365 PF00271 Helicase conserved C-terminal domain RBRH_RS04370 PF00164 Ribosomal protein S12/S23 RBRH_RS04375 PF00177 Ribosomal protein S7p/S5e RBRH_RS04380 PF03764 Elongation factor G, domain IV RBRH_RS04380 PF00009 Elongation factor Tu GTP binding domain RBRH_RS04380 PF03144 Elongation factor Tu domain 2 RBRH_RS04380 PF14492 Elongation Factor G, domain II RBRH_RS04380 PF00679 Elongation factor G C-terminus RBRH_RS04385 PF03143 Elongation factor Tu C-terminal domain RBRH_RS04385 PF03144 Elongation factor Tu domain 2 RBRH_RS04385 PF00009 Elongation factor Tu GTP binding domain RBRH_RS04390 PF00338 Ribosomal protein S10p/S20e RBRH_RS04395 PF00297 Ribosomal protein L3 RBRH_RS04400 PF00573 Ribosomal protein L4/L1 family RBRH_RS04405 PF00276 Ribosomal protein L23 RBRH_RS04410 PF03947 Ribosomal Proteins L2, C-terminal domain RBRH_RS04410 PF00181 Ribosomal Proteins L2, RNA binding domain RBRH_RS04415 PF00203 Ribosomal protein S19 RBRH_RS04420 PF00237 Ribosomal protein L22p/L17e RBRH_RS04425 PF00189 Ribosomal protein S3, C-terminal domain RBRH_RS04425 PF07650 KH domain RBRH_RS04430 PF00252 Ribosomal protein L16p/L10e RBRH_RS04435 PF00831 Ribosomal L29 protein RBRH_RS04440 PF00366 Ribosomal protein S17 RBRH_RS04445 PF00238 Ribosomal protein L14p/L23e RBRH_RS04450 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 RBRH_RS04450 PF00467 KOW motif RBRH_RS04455 PF00281 Ribosomal protein L5 RBRH_RS04455 PF00673 ribosomal L5P family C-terminus RBRH_RS04460 PF00253 Ribosomal protein S14p/S29e RBRH_RS04465 PF00410 Ribosomal protein S8 RBRH_RS04475 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast RBRH_RS04480 PF00333 Ribosomal protein S5, N-terminal domain RBRH_RS04480 PF03719 Ribosomal protein S5, C-terminal domain RBRH_RS04485 PF00327 Ribosomal protein L30p/L7e RBRH_RS04490 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A RBRH_RS04495 PF00344 SecY translocase RBRH_RS04500 PF01176 Translation initiation factor 1A / IF-1 RBRH_RS04505 PF00444 Ribosomal protein L36 RBRH_RS04510 PF00416 Ribosomal protein S13/S18 RBRH_RS04515 PF00411 Ribosomal protein S11 RBRH_RS04520 PF01479 S4 domain RBRH_RS04520 PF00163 Ribosomal protein S4/S9 N-terminal domain RBRH_RS04525 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain RBRH_RS04525 PF01000 RNA polymerase Rpb3/RpoA insert domain RBRH_RS04525 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain RBRH_RS04530 PF01196 Ribosomal protein L17 RBRH_RS04535 PF03091 CutA1 divalent ion tolerance protein RBRH_RS04540 PF11412 Disulphide bond corrector protein DsbC RBRH_RS04540 PF02683 Cytochrome C biogenesis protein transmembrane region RBRH_RS04545 PF00490 Delta-aminolevulinic acid dehydratase RBRH_RS04550 PF01926 50S ribosome-binding GTPase RBRH_RS04555 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RBRH_RS04560 PF05140 ResB-like family RBRH_RS04565 PF01578 Cytochrome C assembly protein RBRH_RS04570 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain RBRH_RS04570 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain RBRH_RS04580 PF01491 Frataxin-like domain RBRH_RS04585 PF17092 Penicillin-binding protein OB-like domain RBRH_RS04585 PF00912 Transglycosylase RBRH_RS04585 PF00905 Penicillin binding protein transpeptidase domain RBRH_RS04605 PF11741 AMIN domain RBRH_RS04605 PF07660 Secretin and TonB N terminus short domain RBRH_RS04605 PF03958 Bacterial type II/III secretion system short domain RBRH_RS04605 PF00263 Bacterial type II and III secretion system protein RBRH_RS04610 PF01202 Shikimate kinase RBRH_RS04615 PF01761 3-dehydroquinate synthase RBRH_RS04620 PF01966 HD domain RBRH_RS04620 PF13286 Phosphohydrolase-associated domain RBRH_RS04625 PF03009 Glycerophosphoryl diester phosphodiesterase family RBRH_RS04655 PF01493 GXGXG motif RBRH_RS04655 PF00310 Glutamine amidotransferases class-II RBRH_RS04655 PF04898 Glutamate synthase central domain RBRH_RS04655 PF01645 Conserved region in glutamate synthase RBRH_RS04660 PF07992 Pyridine nucleotide-disulphide oxidoreductase RBRH_RS04660 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster RBRH_RS04670 PF06472 ABC transporter transmembrane region 2 RBRH_RS04670 PF00005 ABC transporter RBRH_RS04680 PF01266 FAD dependent oxidoreductase RBRH_RS04690 PF05690 Thiazole biosynthesis protein ThiG RBRH_RS04700 PF00005 ABC transporter RBRH_RS04705 PF02405 Permease MlaE RBRH_RS04710 PF02470 MlaD protein RBRH_RS04715 PF04333 MlaA lipoprotein RBRH_RS04730 PF00005 ABC transporter RBRH_RS04735 PF01061 ABC-2 type transporter RBRH_RS04740 PF01722 BolA-like protein RBRH_RS04745 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RBRH_RS04750 PF01634 ATP phosphoribosyltransferase RBRH_RS04755 PF00815 Histidinol dehydrogenase RBRH_RS04760 PF00155 Aminotransferase class I and II RBRH_RS04765 PF00475 Imidazoleglycerol-phosphate dehydratase RBRH_RS04770 PF00117 Glutamine amidotransferase class-I RBRH_RS04775 PF00977 Histidine biosynthesis protein RBRH_RS04780 PF00977 Histidine biosynthesis protein RBRH_RS04785 PF01502 Phosphoribosyl-AMP cyclohydrolase RBRH_RS04790 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase RBRH_RS04800 PF01230 HIT domain RBRH_RS04805 PF02416 mttA/Hcf106 family RBRH_RS04810 PF02416 mttA/Hcf106 family RBRH_RS04815 PF00902 Sec-independent protein translocase protein (TatC) RBRH_RS04820 PF17820 PDZ domain RBRH_RS04820 PF13180 PDZ domain RBRH_RS04825 PF01784 NIF3 (NGG1p interacting factor 3) RBRH_RS04835 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal RBRH_RS04835 PF00355 Rieske [2Fe-2S] domain RBRH_RS04840 PF00032 Cytochrome b(C-terminal)/b6/petD RBRH_RS04840 PF00033 Cytochrome b/b6/petB RBRH_RS04845 PF02167 Cytochrome C1 family RBRH_RS04850 PF02798 Glutathione S-transferase, N-terminal domain RBRH_RS04850 PF00043 Glutathione S-transferase, C-terminal domain RBRH_RS04855 PF04386 Stringent starvation protein B RBRH_RS04880 PF00158 Sigma-54 interaction domain RBRH_RS04880 PF00072 Response regulator receiver domain RBRH_RS04880 PF02954 Bacterial regulatory protein, Fis family RBRH_RS04885 PF00202 Aminotransferase class-III RBRH_RS04900 PF00171 Aldehyde dehydrogenase family RBRH_RS04930 PF00012 Hsp70 protein RBRH_RS04935 PF00313 'Cold-shock' DNA-binding domain RBRH_RS04940 PF13520 Amino acid permease RBRH_RS04955 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase RBRH_RS04960 PF02441 Flavoprotein RBRH_RS04965 PF00462 Glutaredoxin RBRH_RS04970 PF17827 PrmC N-terminal domain RBRH_RS04970 PF05175 Methyltransferase small domain RBRH_RS04975 PF00472 RF-1 domain RBRH_RS04975 PF03462 PCRF domain RBRH_RS04980 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain RBRH_RS04980 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain RBRH_RS04980 PF01488 Shikimate / quinate 5-dehydrogenase RBRH_RS04990 PF01321 Creatinase/Prolidase N-terminal domain RBRH_RS04990 PF00557 Metallopeptidase family M24 RBRH_RS05000 PF00005 ABC transporter RBRH_RS05000 PF12848 ABC transporter RBRH_RS05005 PF00664 ABC transporter transmembrane region RBRH_RS05005 PF00005 ABC transporter RBRH_RS05010 PF06071 Protein of unknown function (DUF933) RBRH_RS05010 PF01926 50S ribosome-binding GTPase RBRH_RS05020 PF01494 FAD binding domain RBRH_RS05025 PF13098 Thioredoxin-like domain RBRH_RS05025 PF10411 Disulfide bond isomerase protein N-terminus RBRH_RS05035 PF02525 Flavodoxin-like fold RBRH_RS05040 PF03167 Uracil DNA glycosylase superfamily RBRH_RS05050 PF00218 Indole-3-glycerol phosphate synthase RBRH_RS05055 PF02885 Glycosyl transferase family, helical bundle domain RBRH_RS05055 PF00591 Glycosyl transferase family, a/b domain RBRH_RS05060 PF00117 Glutamine amidotransferase class-I RBRH_RS05065 PF00425 chorismate binding enzyme RBRH_RS05065 PF04715 Anthranilate synthase component I, N terminal region RBRH_RS05070 PF13419 Haloacid dehalogenase-like hydrolase RBRH_RS05075 PF00834 Ribulose-phosphate 3 epimerase family RBRH_RS05080 PF04379 ApaG domain RBRH_RS05085 PF06725 3D domain RBRH_RS05085 PF03562 MltA specific insert domain RBRH_RS05090 PF00501 AMP-binding enzyme RBRH_RS05090 PF14535 AMP-binding enzyme C-terminal domain RBRH_RS05095 PF03061 Thioesterase superfamily RBRH_RS05100 PF00378 Enoyl-CoA hydratase/isomerase RBRH_RS05105 PF00108 Thiolase, N-terminal domain RBRH_RS05105 PF02803 Thiolase, C-terminal domain RBRH_RS05115 PF00378 Enoyl-CoA hydratase/isomerase RBRH_RS05145 PF01527 Transposase RBRH_RS05190 PF00529 HlyD membrane-fusion protein of T1SS RBRH_RS05190 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RBRH_RS05200 PF04632 Fusaric acid resistance protein family RBRH_RS05205 PF02321 Outer membrane efflux protein RBRH_RS05210 PF03466 LysR substrate binding domain RBRH_RS05210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RBRH_RS05215 PF02913 FAD linked oxidases, C-terminal domain RBRH_RS05215 PF01565 FAD binding domain RBRH_RS05225 PF03358 NADPH-dependent FMN reductase RBRH_RS05230 PF03631 Virulence factor BrkB RBRH_RS05240 PF01264 Chorismate synthase RBRH_RS05260 PF01144 Coenzyme A transferase RBRH_RS05265 PF01144 Coenzyme A transferase RBRH_RS05275 PF01042 Endoribonuclease L-PSP RBRH_RS05280 PF02824 TGS domain RBRH_RS05280 PF13291 ACT domain RBRH_RS05280 PF04607 Region found in RelA / SpoT proteins RBRH_RS05300 PF02824 TGS domain RBRH_RS05300 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RBRH_RS05300 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RBRH_RS05300 PF03129 Anticodon binding domain RBRH_RS05305 PF00707 Translation initiation factor IF-3, C-terminal domain RBRH_RS05305 PF05198 Translation initiation factor IF-3, N-terminal domain RBRH_RS05310 PF01632 Ribosomal protein L35 RBRH_RS05315 PF00453 Ribosomal protein L20 RBRH_RS05320 PF01409 tRNA synthetases class II core domain (F) RBRH_RS05320 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain RBRH_RS05325 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain RBRH_RS05325 PF01588 Putative tRNA binding domain RBRH_RS05325 PF03147 Ferredoxin-fold anticodon binding domain RBRH_RS05325 PF03484 tRNA synthetase B5 domain RBRH_RS05325 PF03483 B3/4 domain RBRH_RS05330 PF00216 Bacterial DNA-binding protein RBRH_RS05340 PF01966 HD domain RBRH_RS05355 PF13609 Gram-negative porin RBRH_RS05360 PF02702 Osmosensitive K+ channel His kinase sensor domain RBRH_RS05360 PF00512 His Kinase A (phospho-acceptor) domain RBRH_RS05360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RBRH_RS05360 PF13493 Domain of unknown function (DUF4118) RBRH_RS05380 PF04679 ATP dependent DNA ligase C terminal region RBRH_RS05380 PF01068 ATP dependent DNA ligase domain RBRH_RS05380 PF13298 DNA polymerase Ligase (LigD) RBRH_RS05385 PF04552 Sigma-54, DNA binding domain RBRH_RS05385 PF04963 Sigma-54 factor, core binding domain RBRH_RS05385 PF00309 Sigma-54 factor, Activator interacting domain (AID) RBRH_RS05390 PF00497 Bacterial extracellular solute-binding proteins, family 3 RBRH_RS05395 PF08546 Ketopantoate reductase PanE/ApbA C terminal RBRH_RS05395 PF02558 Ketopantoate reductase PanE/ApbA RBRH_RS05400 PF00596 Class II Aldolase and Adducin N-terminal domain RBRH_RS05410 PF01374 Glycosyl hydrolase family 46 RBRH_RS05415 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RBRH_RS05420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RBRH_RS05420 PF00512 His Kinase A (phospho-acceptor) domain RBRH_RS05420 PF00672 HAMP domain RBRH_RS05420 PF13426 PAS domain RBRH_RS05420 PF14827 Double sensory domain of two-component sensor kinase RBRH_RS05425 PF00149 Calcineurin-like phosphoesterase RBRH_RS05435 PF09722 Protein of unknown function (DUF2384) RBRH_RS05440 PF00106 short chain dehydrogenase RBRH_RS05455 PF01569 PAP2 superfamily RBRH_RS05460 PF07690 Major Facilitator Superfamily RBRH_RS05465 PF09278 MerR, DNA binding RBRH_RS05465 PF00376 MerR family regulatory protein RBRH_RS05470 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ RBRH_RS05480 PF00155 Aminotransferase class I and II RBRH_RS05485 PF17757 UvrB interaction domain RBRH_RS05485 PF00271 Helicase conserved C-terminal domain RBRH_RS05485 PF04851 Type III restriction enzyme, res subunit RBRH_RS05485 PF02151 UvrB/uvrC motif RBRH_RS05485 PF12344 Ultra-violet resistance protein B RBRH_RS05490 PF10634 Fe2+ transport protein RBRH_RS05495 PF13473 Cupredoxin-like domain RBRH_RS05500 PF03239 Iron permease FTR1 family RBRH_RS05510 PF10636 Hemin uptake protein hemP RBRH_RS05525 PF05726 Pirin C-terminal cupin domain RBRH_RS05525 PF02678 Pirin RBRH_RS05530 PF03466 LysR substrate binding domain RBRH_RS05530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RBRH_RS05540 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RBRH_RS05545 PF00528 Binding-protein-dependent transport system inner membrane component RBRH_RS05550 PF00528 Binding-protein-dependent transport system inner membrane component RBRH_RS05550 PF12911 N-terminal TM domain of oligopeptide transport permease C RBRH_RS05555 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RBRH_RS05555 PF00005 ABC transporter RBRH_RS05560 PF00877 NlpC/P60 family RBRH_RS05565 PF01734 Patatin-like phospholipase RBRH_RS05580 PF01695 IstB-like ATP binding protein RBRH_RS05585 PF02796 Helix-turn-helix domain of resolvase RBRH_RS05585 PF00665 Integrase core domain RBRH_RS05590 PF00005 ABC transporter RBRH_RS05590 PF00664 ABC transporter transmembrane region RBRH_RS05610 PF01381 Helix-turn-helix RBRH_RS05615 PF07929 Plasmid pRiA4b ORF-3-like protein RBRH_RS05620 PF13007 Transposase C of IS166 homeodomain RBRH_RS05620 PF13005 zinc-finger binding domain of transposase IS66 RBRH_RS05620 PF03050 Transposase IS66 family RBRH_RS05620 PF13817 IS66 C-terminal element RBRH_RS05625 PF05717 IS66 Orf2 like protein RBRH_RS05650 PF01850 PIN domain RBRH_RS05685 PF01554 MatE RBRH_RS05695 PF01197 Ribosomal protein L31 RBRH_RS05700 PF06167 Glucose-regulated metallo-peptidase M90 RBRH_RS05710 PF13411 MerR HTH family regulatory protein RBRH_RS05715 PF07497 Rho termination factor, RNA-binding domain RBRH_RS05715 PF07498 Rho termination factor, N-terminal domain RBRH_RS05715 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RBRH_RS05720 PF00085 Thioredoxin RBRH_RS05725 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding RBRH_RS05725 PF12169 DNA polymerase III subunits gamma and tau domain III RBRH_RS05725 PF12170 DNA polymerase III tau subunit V interacting with alpha RBRH_RS05730 PF02575 YbaB/EbfC DNA-binding family RBRH_RS05735 PF02132 RecR protein RBRH_RS05735 PF13662 Toprim domain RBRH_RS05745 PF01975 Survival protein SurE RBRH_RS05755 PF01476 LysM domain RBRH_RS05755 PF01551 Peptidase family M23 RBRH_RS05770 PF05958 tRNA (Uracil-5-)-methyltransferase RBRH_RS05775 PF01027 Inhibitor of apoptosis-promoting Bax1 RBRH_RS05780 PF00334 Nucleoside diphosphate kinase RBRH_RS05785 PF04055 Radical SAM superfamily RBRH_RS05795 PF04551 GcpE protein RBRH_RS05800 PF13393 Histidyl-tRNA synthetase RBRH_RS05800 PF03129 Anticodon binding domain RBRH_RS05810 PF13360 PQQ-like domain RBRH_RS05815 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal RBRH_RS05815 PF01926 50S ribosome-binding GTPase RBRH_RS05820 PF17209 Hfq protein RBRH_RS05825 PF13167 GTP-binding GTPase N-terminal RBRH_RS05825 PF16360 GTP-binding GTPase Middle Region RBRH_RS05825 PF01926 50S ribosome-binding GTPase RBRH_RS05830 PF01145 SPFH domain / Band 7 family RBRH_RS05830 PF12221 Bacterial membrane protein N terminal RBRH_RS05835 PF01145 SPFH domain / Band 7 family RBRH_RS05845 PF13393 Histidyl-tRNA synthetase RBRH_RS05850 PF00709 Adenylosuccinate synthetase RBRH_RS05855 PF00156 Phosphoribosyl transferase domain RBRH_RS05860 PF02705 K+ potassium transporter RBRH_RS05865 PF16921 Tex protein YqgF-like domain RBRH_RS05865 PF09371 Tex-like protein N-terminal domain RBRH_RS05865 PF00575 S1 RNA binding domain RBRH_RS05865 PF17674 HHH domain RBRH_RS05880 PF13307 Helicase C-terminal domain RBRH_RS05880 PF06733 DEAD_2 RBRH_RS05885 PF13525 Outer membrane lipoprotein RBRH_RS05890 PF00849 RNA pseudouridylate synthase RBRH_RS05890 PF01479 S4 domain RBRH_RS05895 PF02578 Multi-copper polyphenol oxidoreductase laccase RBRH_RS05900 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus RBRH_RS05905 PF00108 Thiolase, N-terminal domain RBRH_RS05905 PF02803 Thiolase, C-terminal domain RBRH_RS05910 PF00106 short chain dehydrogenase RBRH_RS05915 PF05233 PHB accumulation regulatory domain RBRH_RS05915 PF07879 PHB/PHA accumulation regulator DNA-binding domain RBRH_RS05920 PF04055 Radical SAM superfamily RBRH_RS05920 PF18693 TRAM domain RBRH_RS05920 PF00919 Uncharacterized protein family UPF0004 RBRH_RS05935 PF01053 Cys/Met metabolism PLP-dependent enzyme RBRH_RS05955 PF00005 ABC transporter RBRH_RS05955 PF12848 ABC transporter RBRH_RS05960 PF17763 Glutaminase/Asparaginase C-terminal domain RBRH_RS05960 PF00710 Asparaginase, N-terminal RBRH_RS05975 PF01250 Ribosomal protein S6 RBRH_RS05985 PF01084 Ribosomal protein S18 RBRH_RS05990 PF03948 Ribosomal protein L9, C-terminal domain RBRH_RS05990 PF01281 Ribosomal protein L9, N-terminal domain RBRH_RS05995 PF00772 DnaB-like helicase N terminal domain RBRH_RS05995 PF03796 DnaB-like helicase C terminal domain RBRH_RS06005 PF01384 Phosphate transporter family RBRH_RS06010 PF00877 NlpC/P60 family RBRH_RS06015 PF02562 PhoH-like protein RBRH_RS06015 PF13638 PIN domain RBRH_RS06020 PF00578 AhpC/TSA family RBRH_RS06025 PF01522 Polysaccharide deacetylase RBRH_RS06030 PF00551 Formyl transferase RBRH_RS06030 PF02911 Formyl transferase, C-terminal domain RBRH_RS06030 PF01370 NAD dependent epimerase/dehydratase family RBRH_RS06035 PF01370 NAD dependent epimerase/dehydratase family RBRH_RS06035 PF00551 Formyl transferase RBRH_RS06035 PF02911 Formyl transferase, C-terminal domain RBRH_RS06040 PF00535 Glycosyl transferase family 2 RBRH_RS06045 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RBRH_RS06050 PF00892 EamA-like transporter family RBRH_RS06055 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase RBRH_RS06065 PF00155 Aminotransferase class I and II RBRH_RS06070 PF00742 Homoserine dehydrogenase RBRH_RS06070 PF01842 ACT domain RBRH_RS06070 PF03447 Homoserine dehydrogenase, NAD binding domain RBRH_RS06075 PF14821 Threonine synthase N terminus RBRH_RS06075 PF00291 Pyridoxal-phosphate dependent enzyme RBRH_RS06080 PF03454 MoeA C-terminal region (domain IV) RBRH_RS06080 PF00994 Probable molybdopterin binding domain RBRH_RS06080 PF03453 MoeA N-terminal region (domain I and II) RBRH_RS06085 PF02597 ThiS family RBRH_RS06090 PF02391 MoaE protein RBRH_RS06115 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain RBRH_RS06115 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain RBRH_RS06125 PF12146 Serine aminopeptidase, S33 RBRH_RS06130 PF13426 PAS domain RBRH_RS06130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RBRH_RS06130 PF00072 Response regulator receiver domain RBRH_RS06140 PF06804 NlpB/DapX lipoprotein RBRH_RS06155 PF02698 DUF218 domain RBRH_RS06175 PF03466 LysR substrate binding domain RBRH_RS06175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RBRH_RS06185 PF01479 S4 domain RBRH_RS06185 PF00849 RNA pseudouridylate synthase RBRH_RS06195 PF17384 RimP C-terminal SH3 domain RBRH_RS06195 PF02576 RimP N-terminal domain RBRH_RS06200 PF08529 NusA N-terminal domain RBRH_RS06200 PF13184 NusA-like KH domain RBRH_RS06205 PF08364 Bacterial translation initiation factor IF-2 associated region RBRH_RS06205 PF11987 Translation-initiation factor 2 RBRH_RS06205 PF00009 Elongation factor Tu GTP binding domain RBRH_RS06205 PF04760 Translation initiation factor IF-2, N-terminal region RBRH_RS06210 PF02033 Ribosome-binding factor A RBRH_RS06230 PF07690 Major Facilitator Superfamily RBRH_RS06235 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RBRH_RS06235 PF00529 HlyD membrane-fusion protein of T1SS RBRH_RS06245 PF01047 MarR family RBRH_RS06250 PF00679 Elongation factor G C-terminus RBRH_RS06250 PF03144 Elongation factor Tu domain 2 RBRH_RS06250 PF00009 Elongation factor Tu GTP binding domain RBRH_RS06260 PF00364 Biotin-requiring enzyme RBRH_RS06260 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RBRH_RS06260 PF02817 e3 binding domain RBRH_RS06265 PF07992 Pyridine nucleotide-disulphide oxidoreductase RBRH_RS06265 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RBRH_RS06270 PF03969 AFG1-like ATPase RBRH_RS06305 PF05974 Domain of unknown function (DUF892) RBRH_RS06330 PF00575 S1 RNA binding domain RBRH_RS06330 PF17876 Cold shock domain RBRH_RS06330 PF00773 RNB domain RBRH_RS06330 PF08206 Ribonuclease B OB domain RBRH_RS06330 PF08461 Ribonuclease R winged-helix domain RBRH_RS06335 PF00588 SpoU rRNA Methylase family RBRH_RS06335 PF08032 RNA 2'-O ribose methyltransferase substrate binding RBRH_RS06340 PF04754 Putative transposase, YhgA-like RBRH_RS06350 PF04198 Putative sugar-binding domain RBRH_RS06350 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) RBRH_RS06355 PF00005 ABC transporter RBRH_RS06355 PF12848 ABC transporter RBRH_RS06360 PF00255 Glutathione peroxidase RBRH_RS06365 PF13609 Gram-negative porin RBRH_RS06370 PF13396 Phospholipase_D-nuclease N-terminal RBRH_RS06370 PF13091 PLD-like domain RBRH_RS06380 PF01546 Peptidase family M20/M25/M40 RBRH_RS06380 PF07687 Peptidase dimerisation domain RBRH_RS06385 PF03960 ArsC family RBRH_RS06390 PF00132 Bacterial transferase hexapeptide (six repeats) RBRH_RS06390 PF14602 Hexapeptide repeat of succinyl-transferase RBRH_RS06390 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal RBRH_RS06395 PF00155 Aminotransferase class I and II RBRH_RS06400 PF02463 RecF/RecN/SMC N terminal domain RBRH_RS06400 PF06470 SMC proteins Flexible Hinge Domain RBRH_RS06410 PF12826 Helix-hairpin-helix motif RBRH_RS06410 PF00533 BRCA1 C Terminus (BRCT) domain RBRH_RS06410 PF01653 NAD-dependent DNA ligase adenylation domain RBRH_RS06410 PF03120 NAD-dependent DNA ligase OB-fold domain RBRH_RS06410 PF03119 NAD-dependent DNA ligase C4 zinc finger domain RBRH_RS06415 PF01327 Polypeptide deformylase RBRH_RS06425 PF08335 GlnD PII-uridylyltransferase RBRH_RS06425 PF01966 HD domain RBRH_RS06425 PF01909 Nucleotidyltransferase domain RBRH_RS06430 PF00557 Metallopeptidase family M24 RBRH_RS06440 PF00318 Ribosomal protein S2 RBRH_RS06445 PF00889 Elongation factor TS RBRH_RS06450 PF00696 Amino acid kinase family RBRH_RS06455 PF01765 Ribosome recycling factor RBRH_RS06460 PF01255 Putative undecaprenyl diphosphate synthase RBRH_RS06470 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase RBRH_RS06470 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain RBRH_RS06470 PF13288 DXP reductoisomerase C-terminal domain RBRH_RS06475 PF17820 PDZ domain RBRH_RS06475 PF02163 Peptidase family M50 RBRH_RS06480 PF01103 Surface antigen RBRH_RS06480 PF07244 Surface antigen variable number repeat RBRH_RS06485 PF03938 Outer membrane protein (OmpH-like) RBRH_RS06490 PF00132 Bacterial transferase hexapeptide (six repeats) RBRH_RS06490 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD RBRH_RS06495 PF07977 FabA-like domain RBRH_RS06500 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 RBRH_RS06500 PF00132 Bacterial transferase hexapeptide (six repeats) RBRH_RS06505 PF02684 Lipid-A-disaccharide synthetase RBRH_RS06510 PF01351 Ribonuclease HII RBRH_RS06515 PF08032 RNA 2'-O ribose methyltransferase substrate binding RBRH_RS06515 PF00588 SpoU rRNA Methylase family RBRH_RS06520 PF03618 Kinase/pyrophosphorylase RBRH_RS06525 PF00391 PEP-utilising enzyme, mobile domain RBRH_RS06525 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain RBRH_RS06525 PF02896 PEP-utilising enzyme, TIM barrel domain RBRH_RS06560 PF01668 SmpB protein RBRH_RS06570 PF03658 RnfH family Ubiquitin RBRH_RS06575 PF00892 EamA-like transporter family RBRH_RS06580 PF00478 IMP dehydrogenase / GMP reductase domain RBRH_RS06580 PF00571 CBS domain RBRH_RS06590 PF00958 GMP synthase C terminal domain RBRH_RS06590 PF02540 NAD synthase RBRH_RS06590 PF00117 Glutamine amidotransferase class-I RBRH_RS06600 PF12833 Helix-turn-helix domain RBRH_RS06600 PF06719 AraC-type transcriptional regulator N-terminus RBRH_RS06615 PF03466 LysR substrate binding domain RBRH_RS06615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RBRH_RS06625 PF03358 NADPH-dependent FMN reductase RBRH_RS06640 PF08240 Alcohol dehydrogenase GroES-like domain RBRH_RS06640 PF00107 Zinc-binding dehydrogenase RBRH_RS06650 PF00403 Heavy-metal-associated domain RBRH_RS06655 PF13411 MerR HTH family regulatory protein RBRH_RS06660 PF13419 Haloacid dehalogenase-like hydrolase RBRH_RS06670 PF07690 Major Facilitator Superfamily RBRH_RS06680 PF00313 'Cold-shock' DNA-binding domain RBRH_RS06720 PF00011 Hsp20/alpha crystallin family RBRH_RS06730 PF00912 Transglycosylase RBRH_RS06730 PF17092 Penicillin-binding protein OB-like domain RBRH_RS06730 PF00905 Penicillin binding protein transpeptidase domain RBRH_RS06735 PF03060 Nitronate monooxygenase RBRH_RS06740 PF02839 Carbohydrate binding domain RBRH_RS06745 PF00817 impB/mucB/samB family RBRH_RS06745 PF11799 impB/mucB/samB family C-terminal domain RBRH_RS06750 PF07729 FCD domain RBRH_RS06750 PF00392 Bacterial regulatory proteins, gntR family RBRH_RS06755 PF06968 Biotin and Thiamin Synthesis associated domain RBRH_RS06755 PF04055 Radical SAM superfamily RBRH_RS06760 PF00155 Aminotransferase class I and II RBRH_RS06770 PF03466 LysR substrate binding domain RBRH_RS06770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RBRH_RS06785 PF02653 Branched-chain amino acid transport system / permease component RBRH_RS06790 PF00005 ABC transporter RBRH_RS06790 PF12399 Branched-chain amino acid ATP-binding cassette transporter RBRH_RS06795 PF00005 ABC transporter RBRH_RS06805 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RBRH_RS06815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RBRH_RS06815 PF03466 LysR substrate binding domain RBRH_RS06820 PF01914 MarC family integral membrane protein RBRH_RS06835 PF00975 Thioesterase domain RBRH_RS06835 PF00550 Phosphopantetheine attachment site RBRH_RS06835 PF00668 Condensation domain RBRH_RS06835 PF13193 AMP-binding enzyme C-terminal domain RBRH_RS06835 PF00501 AMP-binding enzyme RBRH_RS06860 PF01381 Helix-turn-helix RBRH_RS06875 PF01850 PIN domain RBRH_RS06890 PF01548 Transposase RBRH_RS06890 PF02371 Transposase IS116/IS110/IS902 family RBRH_RS06895 PF00665 Integrase core domain RBRH_RS06895 PF02796 Helix-turn-helix domain of resolvase RBRH_RS06900 PF01695 IstB-like ATP binding protein RBRH_RS06915 PF04293 SpoVR like protein RBRH_RS06920 PF04285 Protein of unknown function (DUF444) RBRH_RS06925 PF06798 PrkA serine protein kinase C-terminal domain RBRH_RS06925 PF08298 PrkA AAA domain RBRH_RS06930 PF00005 ABC transporter RBRH_RS06935 PF00072 Response regulator receiver domain RBRH_RS06950 PF13439 Glycosyltransferase Family 4 RBRH_RS06955 PF00982 Glycosyltransferase family 20 RBRH_RS06975 PF01026 TatD related DNase RBRH_RS06980 PF00583 Acetyltransferase (GNAT) family RBRH_RS06985 PF09115 DNA polymerase III, delta subunit, C terminal RBRH_RS06990 PF02223 Thymidylate kinase RBRH_RS06995 PF02618 YceG-like family RBRH_RS07020 PF00107 Zinc-binding dehydrogenase RBRH_RS07020 PF16884 N-terminal domain of oxidoreductase RBRH_RS07040 PF02696 Uncharacterized ACR, YdiU/UPF0061 family RBRH_RS07045 PF01641 SelR domain RBRH_RS07050 PF04279 Intracellular septation protein A RBRH_RS07065 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain RBRH_RS07065 PF02769 AIR synthase related protein, C-terminal domain RBRH_RS07065 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal RBRH_RS07075 PF01256 Carbohydrate kinase RBRH_RS07080 PF00342 Phosphoglucose isomerase RBRH_RS07105 PF07690 Major Facilitator Superfamily RBRH_RS07135 PF00216 Bacterial DNA-binding protein RBRH_RS07140 PF05362 Lon protease (S16) C-terminal proteolytic domain RBRH_RS07140 PF02190 ATP-dependent protease La (LON) substrate-binding domain RBRH_RS07140 PF00004 ATPase family associated with various cellular activities (AAA) RBRH_RS07145 PF10431 C-terminal, D2-small domain, of ClpB protein RBRH_RS07145 PF07724 AAA domain (Cdc48 subfamily) RBRH_RS07145 PF06689 ClpX C4-type zinc finger RBRH_RS07150 PF00574 Clp protease RBRH_RS07155 PF05697 Bacterial trigger factor protein (TF) RBRH_RS07155 PF05698 Bacterial trigger factor protein (TF) C-terminus RBRH_RS07155 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RBRH_RS07190 PF00486 Transcriptional regulatory protein, C terminal RBRH_RS07190 PF00072 Response regulator receiver domain RBRH_RS07195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RBRH_RS07195 PF00672 HAMP domain RBRH_RS07195 PF00512 His Kinase A (phospho-acceptor) domain RBRH_RS07200 PF02542 YgbB family RBRH_RS07205 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase RBRH_RS07210 PF00270 DEAD/DEAH box helicase RBRH_RS07210 PF00271 Helicase conserved C-terminal domain RBRH_RS07210 PF02559 CarD-like/TRCF domain RBRH_RS07210 PF17757 UvrB interaction domain RBRH_RS07210 PF03461 TRCF domain RBRH_RS07215 PF01546 Peptidase family M20/M25/M40 RBRH_RS07215 PF07687 Peptidase dimerisation domain RBRH_RS07220 PF00291 Pyridoxal-phosphate dependent enzyme RBRH_RS07235 PF03167 Uracil DNA glycosylase superfamily RBRH_RS07260 PF05598 Transposase domain (DUF772) RBRH_RS07270 PF05598 Transposase domain (DUF772) RBRH_RS07290 PF18413 Neuraminidase-like domain RBRH_RS07290 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain RBRH_RS07295 PF18413 Neuraminidase-like domain RBRH_RS07295 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain RBRH_RS07315 PF02801 Beta-ketoacyl synthase, C-terminal domain RBRH_RS07315 PF14765 Polyketide synthase dehydratase RBRH_RS07315 PF16197 Ketoacyl-synthetase C-terminal extension RBRH_RS07315 PF00109 Beta-ketoacyl synthase, N-terminal domain RBRH_RS07315 PF08659 KR domain RBRH_RS07315 PF00550 Phosphopantetheine attachment site RBRH_RS07320 PF00550 Phosphopantetheine attachment site RBRH_RS07320 PF16197 Ketoacyl-synthetase C-terminal extension RBRH_RS07320 PF00109 Beta-ketoacyl synthase, N-terminal domain RBRH_RS07320 PF02801 Beta-ketoacyl synthase, C-terminal domain RBRH_RS07320 PF08659 KR domain RBRH_RS07320 PF14765 Polyketide synthase dehydratase RBRH_RS07325 PF00067 Cytochrome P450 RBRH_RS07330 PF13193 AMP-binding enzyme C-terminal domain RBRH_RS07330 PF00668 Condensation domain RBRH_RS07330 PF16197 Ketoacyl-synthetase C-terminal extension RBRH_RS07330 PF00109 Beta-ketoacyl synthase, N-terminal domain RBRH_RS07330 PF00550 Phosphopantetheine attachment site RBRH_RS07330 PF14765 Polyketide synthase dehydratase RBRH_RS07330 PF08659 KR domain RBRH_RS07330 PF02801 Beta-ketoacyl synthase, C-terminal domain RBRH_RS07330 PF00501 AMP-binding enzyme RBRH_RS07335 PF08659 KR domain RBRH_RS07335 PF02801 Beta-ketoacyl synthase, C-terminal domain RBRH_RS07335 PF00501 AMP-binding enzyme RBRH_RS07335 PF13193 AMP-binding enzyme C-terminal domain RBRH_RS07335 PF00668 Condensation domain RBRH_RS07335 PF00550 Phosphopantetheine attachment site RBRH_RS07335 PF00109 Beta-ketoacyl synthase, N-terminal domain RBRH_RS07335 PF16197 Ketoacyl-synthetase C-terminal extension RBRH_RS07335 PF14765 Polyketide synthase dehydratase RBRH_RS07340 PF00550 Phosphopantetheine attachment site RBRH_RS07340 PF16197 Ketoacyl-synthetase C-terminal extension RBRH_RS07340 PF00109 Beta-ketoacyl synthase, N-terminal domain RBRH_RS07340 PF02801 Beta-ketoacyl synthase, C-terminal domain RBRH_RS07340 PF08659 KR domain RBRH_RS07340 PF08242 Methyltransferase domain RBRH_RS07340 PF14765 Polyketide synthase dehydratase RBRH_RS07345 PF08242 Methyltransferase domain RBRH_RS07345 PF14765 Polyketide synthase dehydratase RBRH_RS07345 PF00975 Thioesterase domain RBRH_RS07345 PF16197 Ketoacyl-synthetase C-terminal extension RBRH_RS07345 PF02801 Beta-ketoacyl synthase, C-terminal domain RBRH_RS07345 PF00109 Beta-ketoacyl synthase, N-terminal domain RBRH_RS07345 PF00550 Phosphopantetheine attachment site RBRH_RS07350 PF00698 Acyl transferase domain RBRH_RS07355 PF08241 Methyltransferase domain RBRH_RS07400 PF13332 Hemagglutinin repeat RBRH_RS07400 PF04829 Pre-toxin domain with VENN motif RBRH_RS07400 PF05860 haemagglutination activity domain RBRH_RS07405 PF08479 POTRA domain, ShlB-type RBRH_RS07405 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB RBRH_RS07405 PF17287 POTRA domain RBRH_RS07410 PF01810 LysE type translocator RBRH_RS07430 PF00004 ATPase family associated with various cellular activities (AAA) RBRH_RS07430 PF16450 Proteasomal ATPase OB C-terminal domain RBRH_RS07430 PF17758 Proteasomal ATPase OB N-terminal domain RBRH_RS07540 PF17092 Penicillin-binding protein OB-like domain RBRH_RS07540 PF00912 Transglycosylase RBRH_RS07540 PF00905 Penicillin binding protein transpeptidase domain RBRH_RS07555 PF00155 Aminotransferase class I and II RBRH_RS07555 PF00392 Bacterial regulatory proteins, gntR family RBRH_RS07560 PF02627 Carboxymuconolactone decarboxylase family RBRH_RS07565 PF00072 Response regulator receiver domain RBRH_RS07565 PF01627 Hpt domain RBRH_RS07565 PF00512 His Kinase A (phospho-acceptor) domain RBRH_RS07565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RBRH_RS07565 PF17149 Periplasmic sensor domain found in signal transduction proteins RBRH_RS07565 PF00672 HAMP domain RBRH_RS07570 PF00072 Response regulator receiver domain RBRH_RS07575 PF00512 His Kinase A (phospho-acceptor) domain RBRH_RS07575 PF08446 PAS fold RBRH_RS07575 PF00360 Phytochrome region RBRH_RS07575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RBRH_RS07575 PF01590 GAF domain RBRH_RS07585 PF03466 LysR substrate binding domain RBRH_RS07585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RBRH_RS07590 PF00005 ABC transporter RBRH_RS07590 PF12857 TOBE-like domain RBRH_RS07595 PF00528 Binding-protein-dependent transport system inner membrane component RBRH_RS07600 PF00528 Binding-protein-dependent transport system inner membrane component RBRH_RS07610 PF00717 Peptidase S24-like RBRH_RS07610 PF01726 LexA DNA binding domain RBRH_RS07685 PF03928 Haem-degrading RBRH_RS07695 PF00293 NUDIX domain RBRH_RS07695 PF09297 NADH pyrophosphatase zinc ribbon domain RBRH_RS07700 PF03588 Leucyl/phenylalanyl-tRNA protein transferase RBRH_RS07705 PF04376 Arginine-tRNA-protein transferase, N terminus RBRH_RS07705 PF04377 Arginine-tRNA-protein transferase, C terminus RBRH_RS07710 PF01180 Dihydroorotate dehydrogenase RBRH_RS07715 PF00497 Bacterial extracellular solute-binding proteins, family 3 RBRH_RS07720 PF00528 Binding-protein-dependent transport system inner membrane component RBRH_RS07725 PF13439 Glycosyltransferase Family 4 RBRH_RS07725 PF00534 Glycosyl transferases group 1 RBRH_RS07755 PF00483 Nucleotidyl transferase RBRH_RS07755 PF01050 Mannose-6-phosphate isomerase RBRH_RS07795 PF02016 LD-carboxypeptidase N-terminal domain RBRH_RS07795 PF17676 LD-carboxypeptidase C-terminal domain RBRH_RS07800 PF14437 MafB19-like deaminase RBRH_RS07830 PF00171 Aldehyde dehydrogenase family RBRH_RS07845 PF00875 DNA photolyase RBRH_RS07845 PF03441 FAD binding domain of DNA photolyase RBRH_RS07860 PF13193 AMP-binding enzyme C-terminal domain RBRH_RS07860 PF00501 AMP-binding enzyme RBRH_RS07860 PF16177 Acetyl-coenzyme A synthetase N-terminus RBRH_RS07870 PF03350 Uncharacterized protein family, UPF0114 RBRH_RS07880 PF00210 Ferritin-like domain RBRH_RS07895 PF03544 Gram-negative bacterial TonB protein C-terminal RBRH_RS07900 PF01618 MotA/TolQ/ExbB proton channel family RBRH_RS07905 PF02472 Biopolymer transport protein ExbD/TolR RBRH_RS07910 PF11838 ERAP1-like C-terminal domain RBRH_RS07910 PF01433 Peptidase family M1 domain RBRH_RS07940 PF05974 Domain of unknown function (DUF892) RBRH_RS07950 PF00384 Molybdopterin oxidoreductase RBRH_RS07975 PF01842 ACT domain RBRH_RS07975 PF00696 Amino acid kinase family RBRH_RS07975 PF13840 ACT domain RBRH_RS07980 PF11734 TilS substrate C-terminal domain RBRH_RS07980 PF01171 PP-loop family RBRH_RS07980 PF09179 TilS substrate binding domain RBRH_RS07985 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit RBRH_RS07995 PF09190 DALR domain RBRH_RS07995 PF01406 tRNA synthetases class I (C) catalytic domain RBRH_RS08005 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RBRH_RS08010 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RBRH_RS08015 PF00149 Calcineurin-like phosphoesterase RBRH_RS08020 PF00132 Bacterial transferase hexapeptide (six repeats) RBRH_RS08025 PF00588 SpoU rRNA Methylase family RBRH_RS08030 PF00459 Inositol monophosphatase family RBRH_RS08050 PF01624 MutS domain I RBRH_RS08050 PF05190 MutS family domain IV RBRH_RS08050 PF05192 MutS domain III RBRH_RS08050 PF00488 MutS domain V RBRH_RS08050 PF05188 MutS domain II RBRH_RS08060 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RBRH_RS08065 PF08007 Cupin superfamily protein RBRH_RS08115 PF00501 AMP-binding enzyme RBRH_RS08115 PF13193 AMP-binding enzyme C-terminal domain RBRH_RS08120 PF02770 Acyl-CoA dehydrogenase, middle domain RBRH_RS08120 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RBRH_RS08120 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RBRH_RS08125 PF00753 Metallo-beta-lactamase superfamily RBRH_RS08130 PF06804 NlpB/DapX lipoprotein RBRH_RS08135 PF00701 Dihydrodipicolinate synthetase family RBRH_RS08145 PF00579 tRNA synthetases class I (W and Y) RBRH_RS08150 PF02163 Peptidase family M50 RBRH_RS08155 PF01300 Telomere recombination RBRH_RS08160 PF02811 PHP domain RBRH_RS08165 PF00561 alpha/beta hydrolase fold RBRH_RS08170 PF04305 Protein of unknown function (DUF455) RBRH_RS08175 PF00132 Bacterial transferase hexapeptide (six repeats) RBRH_RS08180 PF01430 Hsp33 protein RBRH_RS08190 PF04977 Septum formation initiator RBRH_RS08195 PF03952 Enolase, N-terminal domain RBRH_RS08195 PF00113 Enolase, C-terminal TIM barrel domain RBRH_RS08200 PF00793 DAHP synthetase I family RBRH_RS08205 PF00117 Glutamine amidotransferase class-I RBRH_RS08205 PF06418 CTP synthase N-terminus RBRH_RS08215 PF02581 Thiamine monophosphate synthase RBRH_RS08220 PF03772 Competence protein RBRH_RS08220 PF00753 Metallo-beta-lactamase superfamily RBRH_RS08225 PF01026 TatD related DNase RBRH_RS08230 PF00005 ABC transporter RBRH_RS08235 PF12704 MacB-like periplasmic core domain RBRH_RS08235 PF02687 FtsX-like permease family RBRH_RS08240 PF05662 Coiled stalk of trimeric autotransporter adhesin RBRH_RS08240 PF03895 YadA-like membrane anchor domain RBRH_RS08240 PF15401 Tryptophan-ring motif of head of Trimeric autotransporter adhesin RBRH_RS08240 PF13018 Extended Signal Peptide of Type V secretion system RBRH_RS08250 PF02272 DHHA1 domain RBRH_RS08250 PF01368 DHH family RBRH_RS08250 PF17768 RecJ OB domain RBRH_RS08260 PF01336 OB-fold nucleic acid binding domain RBRH_RS08260 PF00152 tRNA synthetases class II (D, K and N) RBRH_RS08270 PF04384 Iron-sulphur cluster assembly RBRH_RS08275 PF00111 2Fe-2S iron-sulfur cluster binding domain RBRH_RS08280 PF00012 Hsp70 protein RBRH_RS08285 PF07743 HSCB C-terminal oligomerisation domain RBRH_RS08290 PF01521 Iron-sulphur cluster biosynthesis RBRH_RS08295 PF01592 NifU-like N terminal domain RBRH_RS08300 PF00266 Aminotransferase class-V RBRH_RS08305 PF02082 Transcriptional regulator RBRH_RS08310 PF01451 Low molecular weight phosphotyrosine protein phosphatase RBRH_RS08315 PF00378 Enoyl-CoA hydratase/isomerase RBRH_RS08320 PF02754 Cysteine-rich domain RBRH_RS08325 PF09339 IclR helix-turn-helix domain RBRH_RS08325 PF01614 Bacterial transcriptional regulator RBRH_RS08330 PF00768 D-alanyl-D-alanine carboxypeptidase RBRH_RS08335 PF09361 Phasin protein RBRH_RS08340 PF07992 Pyridine nucleotide-disulphide oxidoreductase RBRH_RS08340 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RBRH_RS08345 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RBRH_RS08345 PF00364 Biotin-requiring enzyme RBRH_RS08345 PF02817 e3 binding domain RBRH_RS08350 PF17831 Pyruvate dehydrogenase E1 component middle domain RBRH_RS08350 PF00456 Transketolase, thiamine diphosphate binding domain RBRH_RS08355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RBRH_RS08355 PF00512 His Kinase A (phospho-acceptor) domain RBRH_RS08355 PF00989 PAS fold RBRH_RS08360 PF00072 Response regulator receiver domain RBRH_RS08360 PF00196 Bacterial regulatory proteins, luxR family RBRH_RS08365 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain RBRH_RS08365 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain RBRH_RS08370 PF01432 Peptidase family M3 RBRH_RS08375 PF07969 Amidohydrolase family RBRH_RS08385 PF04070 Domain of unknown function (DUF378) RBRH_RS08395 PF03372 Endonuclease/Exonuclease/phosphatase family RBRH_RS08400 PF02954 Bacterial regulatory protein, Fis family RBRH_RS08400 PF00072 Response regulator receiver domain RBRH_RS08400 PF00158 Sigma-54 interaction domain RBRH_RS08405 PF00989 PAS fold RBRH_RS08405 PF00512 His Kinase A (phospho-acceptor) domain RBRH_RS08405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RBRH_RS08410 PF03951 Glutamine synthetase, beta-Grasp domain RBRH_RS08410 PF00120 Glutamine synthetase, catalytic domain RBRH_RS08420 PF13533 Biotin-lipoyl like RBRH_RS08425 PF00873 AcrB/AcrD/AcrF family RBRH_RS08430 PF00873 AcrB/AcrD/AcrF family RBRH_RS08470 PF02673 Bacitracin resistance protein BacA RBRH_RS08480 PF01551 Peptidase family M23 RBRH_RS08480 PF01476 LysM domain RBRH_RS08545 PF03477 ATP cone domain RBRH_RS08550 PF00464 Serine hydroxymethyltransferase RBRH_RS08555 PF03061 Thioesterase superfamily RBRH_RS08560 PF01618 MotA/TolQ/ExbB proton channel family RBRH_RS08565 PF02472 Biopolymer transport protein ExbD/TolR RBRH_RS08575 PF07676 WD40-like Beta Propeller Repeat RBRH_RS08575 PF04052 TolB amino-terminal domain RBRH_RS08580 PF00691 OmpA family RBRH_RS08595 PF05973 Phage derived protein Gp49-like (DUF891) RBRH_RS08600 PF01381 Helix-turn-helix RBRH_RS08620 PF01738 Dienelactone hydrolase family RBRH_RS08635 PF02543 Carbamoyltransferase N-terminus RBRH_RS08635 PF16861 Carbamoyltransferase C-terminus RBRH_RS08645 PF00005 ABC transporter RBRH_RS08650 PF13193 AMP-binding enzyme C-terminal domain RBRH_RS08650 PF00550 Phosphopantetheine attachment site RBRH_RS08650 PF00668 Condensation domain RBRH_RS08650 PF00501 AMP-binding enzyme RBRH_RS08680 PF07836 DmpG-like communication domain RBRH_RS08680 PF00682 HMGL-like RBRH_RS08685 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation RBRH_RS08685 PF01118 Semialdehyde dehydrogenase, NAD binding domain RBRH_RS08690 PF01557 Fumarylacetoacetate (FAA) hydrolase family RBRH_RS08695 PF01557 Fumarylacetoacetate (FAA) hydrolase family RBRH_RS08700 PF01361 Tautomerase enzyme RBRH_RS08705 PF03466 LysR substrate binding domain RBRH_RS08705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RBRH_RS08715 PF08502 LeuA allosteric (dimerisation) domain RBRH_RS08715 PF00682 HMGL-like RBRH_RS08730 PF01053 Cys/Met metabolism PLP-dependent enzyme RBRH_RS08735 PF00156 Phosphoribosyl transferase domain RBRH_RS08750 PF08245 Mur ligase middle domain RBRH_RS08750 PF02875 Mur ligase family, glutamate ligase domain RBRH_RS08755 PF01039 Carboxyl transferase domain RBRH_RS08755 PF17848 Acetyl-coA carboxylase zinc finger domain RBRH_RS08760 PF00290 Tryptophan synthase alpha chain RBRH_RS08765 PF01555 DNA methylase RBRH_RS08770 PF00291 Pyridoxal-phosphate dependent enzyme RBRH_RS08775 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase RBRH_RS08780 PF01416 tRNA pseudouridine synthase RBRH_RS08790 PF02774 Semialdehyde dehydrogenase, dimerisation domain RBRH_RS08790 PF01118 Semialdehyde dehydrogenase, NAD binding domain RBRH_RS08795 PF00180 Isocitrate/isopropylmalate dehydrogenase RBRH_RS08800 PF00694 Aconitase C-terminal domain RBRH_RS08805 PF00330 Aconitase family (aconitate hydratase) RBRH_RS08810 PF00285 Citrate synthase, C-terminal domain RBRH_RS08815 PF03937 Flavinator of succinate dehydrogenase RBRH_RS08825 PF02910 Fumarate reductase flavoprotein C-term RBRH_RS08825 PF00890 FAD binding domain RBRH_RS08830 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit RBRH_RS08840 PF07702 UTRA domain RBRH_RS08840 PF00392 Bacterial regulatory proteins, gntR family RBRH_RS08845 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain RBRH_RS08845 PF00056 lactate/malate dehydrogenase, NAD binding domain RBRH_RS08860 PF00330 Aconitase family (aconitate hydratase) RBRH_RS08860 PF00694 Aconitase C-terminal domain RBRH_RS08880 PF08240 Alcohol dehydrogenase GroES-like domain RBRH_RS08880 PF00107 Zinc-binding dehydrogenase RBRH_RS08890 PF00072 Response regulator receiver domain RBRH_RS08890 PF00196 Bacterial regulatory proteins, luxR family RBRH_RS08905 PF18027 Cytosolic carboxypeptidase N-terminal domain RBRH_RS08905 PF00246 Zinc carboxypeptidase RBRH_RS08910 PF03883 Peroxide stress protein YaaA RBRH_RS08920 PF00155 Aminotransferase class I and II RBRH_RS08930 PF00378 Enoyl-CoA hydratase/isomerase RBRH_RS08935 PF00043 Glutathione S-transferase, C-terminal domain RBRH_RS08935 PF02798 Glutathione S-transferase, N-terminal domain RBRH_RS08950 PF00925 GTP cyclohydrolase II RBRH_RS08955 PF00664 ABC transporter transmembrane region RBRH_RS08955 PF00005 ABC transporter RBRH_RS08960 PF01933 Uncharacterised protein family UPF0052 RBRH_RS08965 PF04055 Radical SAM superfamily RBRH_RS08975 PF01996 F420-0:Gamma-glutamyl ligase RBRH_RS08975 PF00881 Nitroreductase family RBRH_RS09005 PF00293 NUDIX domain RBRH_RS09015 PF00361 Proton-conducting membrane transporter RBRH_RS09020 PF00361 Proton-conducting membrane transporter RBRH_RS09025 PF00361 Proton-conducting membrane transporter RBRH_RS09025 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus RBRH_RS09030 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L RBRH_RS09035 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 RBRH_RS09045 PF00146 NADH dehydrogenase RBRH_RS09050 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RBRH_RS09050 PF00384 Molybdopterin oxidoreductase RBRH_RS09050 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal RBRH_RS09055 PF10531 SLBB domain RBRH_RS09055 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region RBRH_RS09055 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit RBRH_RS09065 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit RBRH_RS09070 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit RBRH_RS09075 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit RBRH_RS09080 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 RBRH_RS09090 PF03840 Preprotein translocase SecG subunit RBRH_RS09095 PF00121 Triosephosphate isomerase RBRH_RS09105 PF00013 KH domain RBRH_RS09105 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain RBRH_RS09105 PF03725 3' exoribonuclease family, domain 2 RBRH_RS09105 PF01138 3' exoribonuclease family, domain 1 RBRH_RS09105 PF00575 S1 RNA binding domain RBRH_RS09110 PF00312 Ribosomal protein S15 RBRH_RS09115 PF13458 Periplasmic binding protein RBRH_RS09125 PF00682 HMGL-like RBRH_RS09125 PF08502 LeuA allosteric (dimerisation) domain RBRH_RS09130 PF01066 CDP-alcohol phosphatidyltransferase RBRH_RS09135 PF02666 Phosphatidylserine decarboxylase RBRH_RS09140 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain RBRH_RS09140 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain RBRH_RS09145 PF10369 Small subunit of acetolactate synthase RBRH_RS09150 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RBRH_RS09150 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RBRH_RS09150 PF00205 Thiamine pyrophosphate enzyme, central domain RBRH_RS09180 PF08360 QacR-like protein, C-terminal region RBRH_RS09180 PF00440 Bacterial regulatory proteins, tetR family RBRH_RS09185 PF03641 Possible lysine decarboxylase RBRH_RS09200 PF00893 Small Multidrug Resistance protein RBRH_RS09205 PF00072 Response regulator receiver domain RBRH_RS09205 PF00486 Transcriptional regulatory protein, C terminal RBRH_RS09210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RBRH_RS09210 PF02702 Osmosensitive K+ channel His kinase sensor domain RBRH_RS09210 PF13493 Domain of unknown function (DUF4118) RBRH_RS09210 PF00512 His Kinase A (phospho-acceptor) domain RBRH_RS09210 PF13492 GAF domain RBRH_RS09230 PF01709 Transcriptional regulator RBRH_RS09235 PF02843 Phosphoribosylglycinamide synthetase, C domain RBRH_RS09235 PF02844 Phosphoribosylglycinamide synthetase, N domain RBRH_RS09235 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain RBRH_RS09240 PF01218 Coproporphyrinogen III oxidase RBRH_RS09245 PF01467 Cytidylyltransferase-like RBRH_RS09255 PF02590 Predicted SPOUT methyltransferase RBRH_RS09260 PF02545 Maf-like protein RBRH_RS09265 PF10150 Ribonuclease E/G family RBRH_RS09265 PF00575 S1 RNA binding domain RBRH_RS09285 PF00872 Transposase, Mutator family RBRH_RS09310 PF00664 ABC transporter transmembrane region RBRH_RS09310 PF00005 ABC transporter RBRH_RS09315 PF07733 Bacterial DNA polymerase III alpha NTPase domain RBRH_RS09315 PF17657 Bacterial DNA polymerase III alpha subunit finger domain RBRH_RS09315 PF02811 PHP domain RBRH_RS09315 PF01336 OB-fold nucleic acid binding domain RBRH_RS09315 PF14579 Helix-hairpin-helix motif RBRH_RS09320 PF17773 UPF0176 acylphosphatase like domain RBRH_RS09325 PF00749 tRNA synthetases class I (E and Q), catalytic domain RBRH_RS09330 PF00270 DEAD/DEAH box helicase RBRH_RS09330 PF00271 Helicase conserved C-terminal domain RBRH_RS09335 PF02222 ATP-grasp domain RBRH_RS09335 PF01370 NAD dependent epimerase/dehydratase family RBRH_RS09365 PF17938 Tetracyclin repressor-like, C-terminal domain RBRH_RS09365 PF00440 Bacterial regulatory proteins, tetR family RBRH_RS09370 PF04060 Putative Fe-S cluster RBRH_RS09375 PF00730 HhH-GPD superfamily base excision DNA repair protein RBRH_RS09375 PF10576 Iron-sulfur binding domain of endonuclease III RBRH_RS09375 PF00633 Helix-hairpin-helix motif RBRH_RS09390 PF00034 Cytochrome c RBRH_RS09405 PF03594 Benzoate membrane transport protein RBRH_RS09410 PF00923 Transaldolase/Fructose-6-phosphate aldolase RBRH_RS09420 PF03352 Methyladenine glycosylase RBRH_RS09430 PF12323 Helix-turn-helix domain RBRH_RS09430 PF01385 Probable transposase RBRH_RS09430 PF07282 Putative transposase DNA-binding domain RBRH_RS09475 PF15723 Motility quorum-sensing regulator, toxin of MqsA RBRH_RS09480 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA RBRH_RS09505 PF04345 Chorismate lyase RBRH_RS09510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RBRH_RS09510 PF00183 Hsp90 protein RBRH_RS09520 PF00563 EAL domain RBRH_RS09520 PF00990 Diguanylate cyclase, GGDEF domain RBRH_RS09520 PF03707 Bacterial signalling protein N terminal repeat RBRH_RS09535 PF00521 DNA gyrase/topoisomerase IV, subunit A RBRH_RS09540 PF00986 DNA gyrase B subunit, carboxyl terminus RBRH_RS09540 PF00204 DNA gyrase B RBRH_RS09540 PF01751 Toprim domain RBRH_RS09540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RBRH_RS09545 PF12848 ABC transporter RBRH_RS09545 PF16326 ABC transporter C-terminal domain RBRH_RS09545 PF00005 ABC transporter RBRH_RS09550 PF00301 Rubredoxin RBRH_RS09570 PF01161 Phosphatidylethanolamine-binding protein RBRH_RS09595 PF03631 Virulence factor BrkB RBRH_RS09600 PF00982 Glycosyltransferase family 20 RBRH_RS09615 PF00072 Response regulator receiver domain RBRH_RS09615 PF00158 Sigma-54 interaction domain RBRH_RS09615 PF02954 Bacterial regulatory protein, Fis family RBRH_RS09620 PF02954 Bacterial regulatory protein, Fis family RBRH_RS09620 PF00158 Sigma-54 interaction domain RBRH_RS09620 PF00072 Response regulator receiver domain RBRH_RS09630 PF00005 ABC transporter RBRH_RS09645 PF00672 HAMP domain RBRH_RS09645 PF00512 His Kinase A (phospho-acceptor) domain RBRH_RS09645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RBRH_RS09650 PF00072 Response regulator receiver domain RBRH_RS09650 PF00486 Transcriptional regulatory protein, C terminal RBRH_RS09655 PF00528 Binding-protein-dependent transport system inner membrane component RBRH_RS09665 PF00005 ABC transporter RBRH_RS09670 PF01418 Helix-turn-helix domain, rpiR family RBRH_RS09670 PF01380 SIS domain RBRH_RS09670 PF02685 Glucokinase RBRH_RS09675 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase RBRH_RS09680 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain RBRH_RS09680 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain RBRH_RS09685 PF01047 MarR family RBRH_RS09690 PF07690 Major Facilitator Superfamily RBRH_RS09695 PF00202 Aminotransferase class-III RBRH_RS09700 PF01872 RibD C-terminal domain RBRH_RS09700 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RBRH_RS09705 PF00677 Lumazine binding domain RBRH_RS09720 PF00925 GTP cyclohydrolase II RBRH_RS09720 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase RBRH_RS09725 PF00885 6,7-dimethyl-8-ribityllumazine synthase RBRH_RS09735 PF00155 Aminotransferase class I and II RBRH_RS09740 PF01464 Transglycosylase SLT domain RBRH_RS09740 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain RBRH_RS09745 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase RBRH_RS09765 PF02325 YGGT family RBRH_RS09780 PF02390 Putative methyltransferase RBRH_RS09785 PF02673 Bacitracin resistance protein BacA RBRH_RS09810 PF00581 Rhodanese-like domain RBRH_RS09810 PF17773 UPF0176 acylphosphatase like domain RBRH_RS09810 PF12368 Rhodanase C-terminal RBRH_RS09820 PF00534 Glycosyl transferases group 1 RBRH_RS09820 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) RBRH_RS09830 PF01075 Glycosyltransferase family 9 (heptosyltransferase) RBRH_RS09835 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RBRH_RS09835 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RBRH_RS09835 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RBRH_RS09835 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RBRH_RS09850 PF16363 GDP-mannose 4,6 dehydratase RBRH_RS09865 PF04932 O-Antigen ligase RBRH_RS09870 PF02719 Polysaccharide biosynthesis protein RBRH_RS09875 PF00953 Glycosyl transferase family 4 RBRH_RS09880 PF01370 NAD dependent epimerase/dehydratase family RBRH_RS09900 PF03275 UDP-galactopyranose mutase RBRH_RS09910 PF01061 ABC-2 type transporter RBRH_RS09915 PF00005 ABC transporter RBRH_RS09935 PF04321 RmlD substrate binding domain RBRH_RS09940 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase RBRH_RS09945 PF00483 Nucleotidyl transferase RBRH_RS09950 PF16363 GDP-mannose 4,6 dehydratase RBRH_RS09955 PF02622 Uncharacterized ACR, COG1678 RBRH_RS09965 PF00149 Calcineurin-like phosphoesterase RBRH_RS09975 PF01979 Amidohydrolase family RBRH_RS09980 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RBRH_RS09980 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RBRH_RS09985 PF00156 Phosphoribosyl transferase domain RBRH_RS09990 PF03652 Holliday junction resolvase RBRH_RS09995 PF02622 Uncharacterized ACR, COG1678 RBRH_RS10005 PF00301 Rubredoxin RBRH_RS10015 PF00118 TCP-1/cpn60 chaperonin family RBRH_RS10020 PF00166 Chaperonin 10 Kd subunit RBRH_RS10025 PF00593 TonB dependent receptor RBRH_RS10025 PF07715 TonB-dependent Receptor Plug Domain RBRH_RS10035 PF04960 Glutaminase RBRH_RS10050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RBRH_RS10050 PF03466 LysR substrate binding domain RBRH_RS10060 PF07690 Major Facilitator Superfamily RBRH_RS10090 PF01061 ABC-2 type transporter RBRH_RS10095 PF00005 ABC transporter RBRH_RS10105 PF00005 ABC transporter RBRH_RS10110 PF00950 ABC 3 transport family RBRH_RS10115 PF07690 Major Facilitator Superfamily RBRH_RS10120 PF02321 Outer membrane efflux protein RBRH_RS10125 PF00873 AcrB/AcrD/AcrF family RBRH_RS10130 PF00529 HlyD membrane-fusion protein of T1SS RBRH_RS10130 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RBRH_RS10135 PF00440 Bacterial regulatory proteins, tetR family RBRH_RS10135 PF08361 MAATS-type transcriptional repressor, C-terminal region RBRH_RS10150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RBRH_RS10150 PF00512 His Kinase A (phospho-acceptor) domain RBRH_RS10150 PF08521 Two-component sensor kinase N-terminal RBRH_RS10155 PF00486 Transcriptional regulatory protein, C terminal RBRH_RS10155 PF00072 Response regulator receiver domain RBRH_RS10160 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family RBRH_RS10170 PF01300 Telomere recombination RBRH_RS10170 PF03481 Putative GTP-binding controlling metal-binding RBRH_RS10175 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain RBRH_RS10175 PF02222 ATP-grasp domain RBRH_RS10180 PF00731 AIR carboxylase RBRH_RS10185 PF01259 SAICAR synthetase RBRH_RS10190 PF01116 Fructose-bisphosphate aldolase class-II RBRH_RS10195 PF02887 Pyruvate kinase, alpha/beta domain RBRH_RS10195 PF00224 Pyruvate kinase, barrel domain RBRH_RS10200 PF00162 Phosphoglycerate kinase RBRH_RS10215 PF01063 Amino-transferase class IV RBRH_RS10225 PF01075 Glycosyltransferase family 9 (heptosyltransferase) RBRH_RS10235 PF00561 alpha/beta hydrolase fold RBRH_RS10245 PF01435 Peptidase family M48 RBRH_RS10245 PF13181 Tetratricopeptide repeat RBRH_RS10250 PF01967 MoaC family RBRH_RS10260 PF00114 Pilin (bacterial filament) RBRH_RS10260 PF07963 Prokaryotic N-terminal methylation motif RBRH_RS10265 PF03741 Integral membrane protein TerC family RBRH_RS10270 PF02629 CoA binding domain RBRH_RS10270 PF00549 CoA-ligase RBRH_RS10285 PF02631 RecX family RBRH_RS10290 PF00154 recA bacterial DNA recombination protein RBRH_RS10320 PF01594 AI-2E family transporter RBRH_RS10325 PF01566 Natural resistance-associated macrophage protein RBRH_RS10335 PF05067 Manganese containing catalase RBRH_RS10340 PF01738 Dienelactone hydrolase family RBRH_RS10340 PF00156 Phosphoribosyl transferase domain RBRH_RS10360 PF00034 Cytochrome c RBRH_RS10365 PF00034 Cytochrome c RBRH_RS10365 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RBRH_RS10370 PF00270 DEAD/DEAH box helicase RBRH_RS10370 PF00271 Helicase conserved C-terminal domain RBRH_RS10385 PF00455 DeoR C terminal sensor domain RBRH_RS10385 PF08220 DeoR-like helix-turn-helix domain RBRH_RS10400 PF16901 C-terminal domain of alpha-glycerophosphate oxidase RBRH_RS10400 PF01266 FAD dependent oxidoreductase RBRH_RS10405 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RBRH_RS10405 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RBRH_RS10410 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase RBRH_RS10425 PF02562 PhoH-like protein RBRH_RS10430 PF02130 Uncharacterized protein family UPF0054 RBRH_RS10435 PF04752 ChaC-like protein RBRH_RS10440 PF03471 Transporter associated domain RBRH_RS10440 PF00571 CBS domain RBRH_RS10445 PF00795 Carbon-nitrogen hydrolase RBRH_RS10450 PF02091 Glycyl-tRNA synthetase alpha subunit RBRH_RS10455 PF02092 Glycyl-tRNA synthetase beta subunit RBRH_RS10455 PF05746 DALR anticodon binding domain RBRH_RS10465 PF01553 Acyltransferase RBRH_RS10475 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RBRH_RS10610 PF00398 Ribosomal RNA adenine dimethylase RBRH_RS10620 PF09312 SurA N-terminal domain RBRH_RS10625 PF04453 LPS transport system D RBRH_RS10635 PF05195 Aminopeptidase P, N-terminal domain RBRH_RS10635 PF00557 Metallopeptidase family M24 RBRH_RS10640 PF01494 FAD binding domain RBRH_RS10645 PF01207 Dihydrouridine synthase (Dus) RBRH_RS10650 PF02954 Bacterial regulatory protein, Fis family RBRH_RS10655 PF01808 AICARFT/IMPCHase bienzyme RBRH_RS10655 PF02142 MGS-like domain RBRH_RS10660 PF02075 Crossover junction endodeoxyribonuclease RuvC RBRH_RS10665 PF07499 RuvA, C-terminal domain RBRH_RS10665 PF01330 RuvA N terminal domain RBRH_RS10670 PF17864 RuvB AAA lid domain RBRH_RS10670 PF05496 Holliday junction DNA helicase RuvB P-loop domain RBRH_RS10670 PF05491 RuvB C-terminal winged helix domain RBRH_RS10675 PF02580 D-Tyr-tRNA(Tyr) deacylase RBRH_RS10680 PF01479 S4 domain RBRH_RS10680 PF00579 tRNA synthetases class I (W and Y) RBRH_RS10695 PF01521 Iron-sulphur cluster biosynthesis RBRH_RS10700 PF00380 Ribosomal protein S9/S16 RBRH_RS10705 PF00572 Ribosomal protein L13 RBRH_RS10710 PF02566 OsmC-like protein RBRH_RS10720 PF01979 Amidohydrolase family RBRH_RS10730 PF00005 ABC transporter RBRH_RS10735 PF00528 Binding-protein-dependent transport system inner membrane component RBRH_RS10740 PF00528 Binding-protein-dependent transport system inner membrane component RBRH_RS10745 PF00497 Bacterial extracellular solute-binding proteins, family 3 RBRH_RS10750 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RBRH_RS10750 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain RBRH_RS10755 PF03466 LysR substrate binding domain RBRH_RS10755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RBRH_RS10765 PF03061 Thioesterase superfamily RBRH_RS10780 PF02634 FdhD/NarQ family RBRH_RS10785 PF00378 Enoyl-CoA hydratase/isomerase RBRH_RS10790 PF02803 Thiolase, C-terminal domain RBRH_RS10790 PF00108 Thiolase, N-terminal domain RBRH_RS10800 PF02770 Acyl-CoA dehydrogenase, middle domain RBRH_RS10800 PF12806 Acetyl-CoA dehydrogenase C-terminal like RBRH_RS10800 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RBRH_RS10800 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RBRH_RS10810 PF13091 PLD-like domain RBRH_RS10820 PF01336 OB-fold nucleic acid binding domain RBRH_RS10820 PF02938 GAD domain RBRH_RS10820 PF00152 tRNA synthetases class II (D, K and N) RBRH_RS10840 PF03109 ABC1 family RBRH_RS10855 PF01209 ubiE/COQ5 methyltransferase family RBRH_RS10880 PF00585 C-terminal regulatory domain of Threonine dehydratase RBRH_RS10880 PF00291 Pyridoxal-phosphate dependent enzyme RBRH_RS10885 PF14489 QueF-like protein RBRH_RS10885 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term RBRH_RS10890 PF07152 YaeQ protein RBRH_RS10895 PF01042 Endoribonuclease L-PSP RBRH_RS10900 PF07969 Amidohydrolase family RBRH_RS10905 PF01380 SIS domain RBRH_RS10905 PF01418 Helix-turn-helix domain, rpiR family RBRH_RS10920 PF07690 Major Facilitator Superfamily RBRH_RS10930 PF07859 alpha/beta hydrolase fold RBRH_RS10940 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) RBRH_RS10945 PF00436 Single-strand binding protein family RBRH_RS10950 PF07690 Major Facilitator Superfamily RBRH_RS10955 PF17755 UvrA DNA-binding domain RBRH_RS10955 PF17760 UvrA interaction domain RBRH_RS10965 PF00551 Formyl transferase RBRH_RS10980 PF00156 Phosphoribosyl transferase domain RBRH_RS10985 PF02080 TrkA-C domain RBRH_RS10985 PF00999 Sodium/hydrogen exchanger family RBRH_RS10985 PF02254 TrkA-N domain RBRH_RS10990 PF00571 CBS domain RBRH_RS10990 PF01380 SIS domain RBRH_RS11010 PF00005 ABC transporter RBRH_RS11010 PF12399 Branched-chain amino acid ATP-binding cassette transporter RBRH_RS11015 PF04552 Sigma-54, DNA binding domain RBRH_RS11015 PF04963 Sigma-54 factor, core binding domain RBRH_RS11015 PF00309 Sigma-54 factor, Activator interacting domain (AID) RBRH_RS11020 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein RBRH_RS11025 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RBRH_RS11030 PF07475 HPr Serine kinase C-terminal domain RBRH_RS11030 PF02603 HPr Serine kinase N terminus RBRH_RS11035 PF03668 P-loop ATPase protein family RBRH_RS11045 PF14815 NUDIX domain RBRH_RS11045 PF10576 Iron-sulfur binding domain of endonuclease III RBRH_RS11045 PF00633 Helix-hairpin-helix motif RBRH_RS11045 PF00730 HhH-GPD superfamily base excision DNA repair protein RBRH_RS11050 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain RBRH_RS11050 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain RBRH_RS11050 PF06827 Zinc finger found in FPG and IleRS RBRH_RS11065 PF00288 GHMP kinases N terminal domain RBRH_RS11065 PF08544 GHMP kinases C terminal RBRH_RS11075 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase RBRH_RS11075 PF14572 Phosphoribosyl synthetase-associated domain RBRH_RS11080 PF14693 Ribosomal protein TL5, C-terminal domain RBRH_RS11080 PF01386 Ribosomal L25p family RBRH_RS11085 PF01195 Peptidyl-tRNA hydrolase RBRH_RS11090 PF00037 4Fe-4S binding domain RBRH_RS11095 PF01467 Cytidylyltransferase-like RBRH_RS11110 PF01810 LysE type translocator RBRH_RS11115 PF13417 Glutathione S-transferase, N-terminal domain RBRH_RS11120 PF01557 Fumarylacetoacetate (FAA) hydrolase family RBRH_RS11140 PF00140 Sigma-70 factor, region 1.2 RBRH_RS11140 PF04542 Sigma-70 region 2 RBRH_RS11140 PF04545 Sigma-70, region 4 RBRH_RS11150 PF01654 Cytochrome bd terminal oxidase subunit I RBRH_RS11155 PF02322 Cytochrome bd terminal oxidase subunit II RBRH_RS11170 PF03180 NLPA lipoprotein RBRH_RS11180 PF01040 UbiA prenyltransferase family RBRH_RS11205 PF00510 Cytochrome c oxidase subunit III RBRH_RS11215 PF00115 Cytochrome C and Quinol oxidase polypeptide I RBRH_RS11220 PF00116 Cytochrome C oxidase subunit II, periplasmic domain RBRH_RS11220 PF02790 Cytochrome C oxidase subunit II, transmembrane domain RBRH_RS11230 PF08241 Methyltransferase domain RBRH_RS11235 PF00156 Phosphoribosyl transferase domain RBRH_RS11240 PF00588 SpoU rRNA Methylase family RBRH_RS11245 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus RBRH_RS11245 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus RBRH_RS11250 PF02556 Preprotein translocase subunit SecB RBRH_RS11255 PF00462 Glutaredoxin RBRH_RS11260 PF00581 Rhodanese-like domain RBRH_RS11265 PF00300 Histidine phosphatase superfamily (branch 1) RBRH_RS11275 PF00899 ThiF family RBRH_RS11280 PF02896 PEP-utilising enzyme, TIM barrel domain RBRH_RS11280 PF05524 PEP-utilising enzyme, N-terminal RBRH_RS11280 PF00391 PEP-utilising enzyme, mobile domain RBRH_RS11290 PF00381 PTS HPr component phosphorylation site RBRH_RS11300 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain RBRH_RS11300 PF02951 Prokaryotic glutathione synthetase, N-terminal domain RBRH_RS11310 PF00909 Ammonium Transporter Family RBRH_RS11315 PF00543 Nitrogen regulatory protein P-II RBRH_RS11325 PF04380 Membrane fusogenic activity RBRH_RS11330 PF13335 Magnesium chelatase, subunit ChlI C-terminal RBRH_RS11330 PF01078 Magnesium chelatase, subunit ChlI RBRH_RS11340 PF00578 AhpC/TSA family RBRH_RS11345 PF04055 Radical SAM superfamily RBRH_RS11345 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family RBRH_RS11360 PF03466 LysR substrate binding domain RBRH_RS11360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RBRH_RS11365 PF04359 Protein of unknown function (DUF493) RBRH_RS11370 PF07943 Penicillin-binding protein 5, C-terminal domain RBRH_RS11370 PF00768 D-alanyl-D-alanine carboxypeptidase RBRH_RS11395 PF00005 ABC transporter RBRH_RS11400 PF02405 Permease MlaE RBRH_RS11405 PF02237 Biotin protein ligase C terminal domain RBRH_RS11405 PF03099 Biotin/lipoate A/B protein ligase family RBRH_RS11410 PF03309 Type III pantothenate kinase RBRH_RS11415 PF01467 Cytidylyltransferase-like RBRH_RS11425 PF13411 MerR HTH family regulatory protein RBRH_RS11425 PF02310 B12 binding domain RBRH_RS11435 PF00378 Enoyl-CoA hydratase/isomerase RBRH_RS11450 PF12091 Protein of unknown function (DUF3567) RBRH_RS11455 PF02574 Homocysteine S-methyltransferase RBRH_RS11455 PF00809 Pterin binding enzyme RBRH_RS11455 PF02965 Vitamin B12 dependent methionine synthase, activation domain RBRH_RS11455 PF02607 B12 binding domain RBRH_RS11455 PF02310 B12 binding domain RBRH_RS11465 PF00750 tRNA synthetases class I (R) RBRH_RS11465 PF03485 Arginyl tRNA synthetase N terminal domain RBRH_RS11465 PF05746 DALR anticodon binding domain RBRH_RS11475 PF13462 Thioredoxin RBRH_RS11485 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RBRH_RS11505 PF13411 MerR HTH family regulatory protein RBRH_RS11515 PF00484 Carbonic anhydrase RBRH_RS11535 PF00202 Aminotransferase class-III RBRH_RS11540 PF04055 Radical SAM superfamily RBRH_RS11540 PF06968 Biotin and Thiamin Synthesis associated domain RBRH_RS11550 PF06969 HemN C-terminal domain RBRH_RS11550 PF04055 Radical SAM superfamily RBRH_RS11565 PF00905 Penicillin binding protein transpeptidase domain RBRH_RS11565 PF03717 Penicillin-binding Protein dimerisation domain RBRH_RS11575 PF13593 SBF-like CPA transporter family (DUF4137) RBRH_RS11585 PF03466 LysR substrate binding domain RBRH_RS11585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RBRH_RS11605 PF08402 TOBE domain RBRH_RS11605 PF00005 ABC transporter RBRH_RS11655 PF04972 BON domain RBRH_RS11660 PF13580 SIS domain RBRH_RS11665 PF02021 Uncharacterised protein family UPF0102 RBRH_RS11670 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RBRH_RS11675 PF05036 Sporulation related domain RBRH_RS11675 PF03330 Lytic transglycolase RBRH_RS11685 PF00753 Metallo-beta-lactamase superfamily RBRH_RS11695 PF13439 Glycosyltransferase Family 4 RBRH_RS11695 PF00534 Glycosyl transferases group 1 RBRH_RS11700 PF01037 Lrp/AsnC ligand binding domain RBRH_RS11705 PF01545 Cation efflux family RBRH_RS11705 PF16916 Dimerisation domain of Zinc Transporter RBRH_RS11710 PF00816 H-NS histone family RBRH_RS11720 PF07690 Major Facilitator Superfamily RBRH_RS11725 PF13458 Periplasmic binding protein RBRH_RS11730 PF01738 Dienelactone hydrolase family RBRH_RS11735 PF01966 HD domain RBRH_RS11735 PF01743 Poly A polymerase head domain RBRH_RS11735 PF12627 Probable RNA and SrmB- binding site of polymerase A RBRH_RS11740 PF14718 Soluble lytic murein transglycosylase L domain RBRH_RS11740 PF01464 Transglycosylase SLT domain RBRH_RS11745 PF01812 5-formyltetrahydrofolate cyclo-ligase family RBRH_RS11755 PF02682 Carboxyltransferase domain, subdomain C and D RBRH_RS11760 PF02626 Carboxyltransferase domain, subdomain A and B RBRH_RS11765 PF03746 LamB/YcsF family RBRH_RS11785 PF01470 Pyroglutamyl peptidase RBRH_RS11795 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RBRH_RS11795 PF00005 ABC transporter RBRH_RS11800 PF00005 ABC transporter RBRH_RS11800 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RBRH_RS11805 PF12911 N-terminal TM domain of oligopeptide transport permease C RBRH_RS11805 PF00528 Binding-protein-dependent transport system inner membrane component RBRH_RS11810 PF00528 Binding-protein-dependent transport system inner membrane component RBRH_RS11815 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RBRH_RS11820 PF02219 Methylenetetrahydrofolate reductase RBRH_RS11825 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV RBRH_RS11830 PF05221 S-adenosyl-L-homocysteine hydrolase RBRH_RS11830 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain RBRH_RS11835 PF04172 LrgB-like family RBRH_RS11840 PF03788 LrgA family RBRH_RS11845 PF03466 LysR substrate binding domain RBRH_RS11845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RBRH_RS11855 PF13640 2OG-Fe(II) oxygenase superfamily RBRH_RS11855 PF18331 PKHD-type hydroxylase C-terminal domain RBRH_RS11860 PF07715 TonB-dependent Receptor Plug Domain RBRH_RS11860 PF00593 TonB dependent receptor RBRH_RS11865 PF01636 Phosphotransferase enzyme family RBRH_RS11885 PF00438 S-adenosylmethionine synthetase, N-terminal domain RBRH_RS11885 PF02772 S-adenosylmethionine synthetase, central domain RBRH_RS11885 PF02773 S-adenosylmethionine synthetase, C-terminal domain RBRH_RS11890 PF03279 Bacterial lipid A biosynthesis acyltransferase RBRH_RS11895 PF01678 Diaminopimelate epimerase RBRH_RS11905 PF00589 Phage integrase family RBRH_RS11905 PF02899 Phage integrase, N-terminal SAM-like domain RBRH_RS11910 PF17785 PUA-like domain RBRH_RS11910 PF10672 S-adenosylmethionine-dependent methyltransferase RBRH_RS11915 PF02492 CobW/HypB/UreG, nucleotide-binding domain RBRH_RS11915 PF07683 Cobalamin synthesis protein cobW C-terminal domain RBRH_RS11920 PF01258 Prokaryotic dksA/traR C4-type zinc finger RBRH_RS11925 PF00227 Proteasome subunit RBRH_RS11930 PF00004 ATPase family associated with various cellular activities (AAA) RBRH_RS11930 PF07724 AAA domain (Cdc48 subfamily) RBRH_RS11935 PF02954 Bacterial regulatory protein, Fis family RBRH_RS11935 PF00072 Response regulator receiver domain RBRH_RS11945 PF07690 Major Facilitator Superfamily RBRH_RS11955 PF00696 Amino acid kinase family RBRH_RS11975 PF07690 Major Facilitator Superfamily RBRH_RS11985 PF03372 Endonuclease/Exonuclease/phosphatase family RBRH_RS11990 PF02934 GatB/GatE catalytic domain RBRH_RS11990 PF02637 GatB domain RBRH_RS11995 PF01425 Amidase RBRH_RS12000 PF02686 Glu-tRNAGln amidotransferase C subunit RBRH_RS12020 PF00905 Penicillin binding protein transpeptidase domain RBRH_RS12020 PF03717 Penicillin-binding Protein dimerisation domain RBRH_RS12025 PF01098 Cell cycle protein RBRH_RS12030 PF01242 6-pyruvoyl tetrahydropterin synthase RBRH_RS12040 PF06508 Queuosine biosynthesis protein QueC RBRH_RS12045 PF13439 Glycosyltransferase Family 4 RBRH_RS12065 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) RBRH_RS12080 PF02954 Bacterial regulatory protein, Fis family RBRH_RS12080 PF00072 Response regulator receiver domain RBRH_RS12080 PF00158 Sigma-54 interaction domain RBRH_RS12085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RBRH_RS12085 PF00672 HAMP domain RBRH_RS12095 PF01029 NusB family RBRH_RS12095 PF01189 16S rRNA methyltransferase RsmB/F RBRH_RS12100 PF01435 Peptidase family M48 RBRH_RS12105 PF00551 Formyl transferase RBRH_RS12105 PF02911 Formyl transferase, C-terminal domain RBRH_RS12110 PF01327 Polypeptide deformylase RBRH_RS12130 PF01131 DNA topoisomerase RBRH_RS12130 PF01751 Toprim domain RBRH_RS12140 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain RBRH_RS12140 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain RBRH_RS12145 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RBRH_RS12145 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RBRH_RS12150 PF00892 EamA-like transporter family RBRH_RS12170 PF03783 Curli production assembly/transport component CsgG RBRH_RS12205 PF10396 GTP-binding protein TrmE N-terminus RBRH_RS12205 PF12631 MnmE helical domain RBRH_RS12205 PF01926 50S ribosome-binding GTPase RBRH_RS12215 PF14849 YidC periplasmic domain RBRH_RS12215 PF02096 60Kd inner membrane protein RBRH_RS12220 PF01809 Putative membrane protein insertion efficiency factor RBRH_RS12225 PF00825 Ribonuclease P RBRH_RS12230 PF00468 Ribosomal protein L34 RBRH_RS12270 PF01037 Lrp/AsnC ligand binding domain RBRH_RS12285 PF01810 LysE type translocator RBRH_RS12290 PF00793 DAHP synthetase I family RBRH_RS12300 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain RBRH_RS12300 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain RBRH_RS12325 PF00708 Acylphosphatase RBRH_RS12335 PF10411 Disulfide bond isomerase protein N-terminus RBRH_RS12335 PF13098 Thioredoxin-like domain RBRH_RS12345 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RBRH_RS12345 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RBRH_RS12350 PF02770 Acyl-CoA dehydrogenase, middle domain RBRH_RS12350 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RBRH_RS12350 PF12806 Acetyl-CoA dehydrogenase C-terminal like RBRH_RS12350 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RBRH_RS12360 PF00571 CBS domain RBRH_RS12360 PF00478 IMP dehydrogenase / GMP reductase domain RBRH_RS12370 PF00501 AMP-binding enzyme RBRH_RS12370 PF13193 AMP-binding enzyme C-terminal domain RBRH_RS12370 PF00550 Phosphopantetheine attachment site RBRH_RS12370 PF00668 Condensation domain RBRH_RS12385 PF04303 PrpF protein RBRH_RS12395 PF00285 Citrate synthase, C-terminal domain RBRH_RS12405 PF00158 Sigma-54 interaction domain RBRH_RS12405 PF02954 Bacterial regulatory protein, Fis family RBRH_RS12405 PF06506 Propionate catabolism activator RBRH_RS12410 PF00583 Acetyltransferase (GNAT) family RBRH_RS12420 PF02146 Sir2 family RBRH_RS12435 PF00486 Transcriptional regulatory protein, C terminal RBRH_RS12435 PF00072 Response regulator receiver domain RBRH_RS12440 PF01734 Patatin-like phospholipase RBRH_RS12445 PF00528 Binding-protein-dependent transport system inner membrane component RBRH_RS12455 PF04996 Succinylarginine dihydrolase RBRH_RS12460 PF07690 Major Facilitator Superfamily RBRH_RS12480 PF00816 H-NS histone family RBRH_RS12510 PF00668 Condensation domain RBRH_RS12510 PF13193 AMP-binding enzyme C-terminal domain RBRH_RS12510 PF00501 AMP-binding enzyme RBRH_RS12510 PF00975 Thioesterase domain RBRH_RS12510 PF00550 Phosphopantetheine attachment site RBRH_RS12515 PF13333 Integrase core domain RBRH_RS12515 PF00665 Integrase core domain RBRH_RS12515 PF13276 HTH-like domain RBRH_RS12545 PF03328 HpcH/HpaI aldolase/citrate lyase family RBRH_RS12565 PF00797 N-acetyltransferase RBRH_RS12615 PF01695 IstB-like ATP binding protein RBRH_RS12620 PF00665 Integrase core domain RBRH_RS12640 PF01544 CorA-like Mg2+ transporter protein RBRH_RS12645 PF02308 MgtC family RBRH_RS12655 PF00497 Bacterial extracellular solute-binding proteins, family 3 RBRH_RS12660 PF00528 Binding-protein-dependent transport system inner membrane component RBRH_RS12665 PF00528 Binding-protein-dependent transport system inner membrane component RBRH_RS12680 PF13426 PAS domain RBRH_RS12680 PF00072 Response regulator receiver domain RBRH_RS12680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RBRH_RS12715 PF02543 Carbamoyltransferase N-terminus RBRH_RS12715 PF16861 Carbamoyltransferase C-terminus RBRH_RS12725 PF00550 Phosphopantetheine attachment site RBRH_RS12725 PF00668 Condensation domain RBRH_RS12725 PF13193 AMP-binding enzyme C-terminal domain RBRH_RS12725 PF00501 AMP-binding enzyme RBRH_RS12730 PF00512 His Kinase A (phospho-acceptor) domain RBRH_RS12730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RBRH_RS12730 PF00672 HAMP domain RBRH_RS12740 PF00155 Aminotransferase class I and II RBRH_RS12745 PF00324 Amino acid permease RBRH_RS12760 PF00501 AMP-binding enzyme RBRH_RS12760 PF13193 AMP-binding enzyme C-terminal domain RBRH_RS12770 PF01202 Shikimate kinase RBRH_RS12775 PF00378 Enoyl-CoA hydratase/isomerase RBRH_RS12785 PF00970 Oxidoreductase FAD-binding domain RBRH_RS12785 PF00037 4Fe-4S binding domain RBRH_RS12785 PF00175 Oxidoreductase NAD-binding domain RBRH_RS12795 PF01272 Transcription elongation factor, GreA/GreB, C-term RBRH_RS12795 PF03449 Transcription elongation factor, N-terminal RBRH_RS12805 PF13784 Fic/DOC family N-terminal RBRH_RS12805 PF02661 Fic/DOC family RBRH_RS12825 PF02954 Bacterial regulatory protein, Fis family RBRH_RS12825 PF00158 Sigma-54 interaction domain RBRH_RS12825 PF00072 Response regulator receiver domain RBRH_RS12830 PF00550 Phosphopantetheine attachment site RBRH_RS12850 PF18412 Outer-membrane lipoprotein Wza C-terminal domain RBRH_RS12850 PF02563 Polysaccharide biosynthesis/export protein RBRH_RS12850 PF10531 SLBB domain RBRH_RS12855 PF02706 Chain length determinant protein RBRH_RS12855 PF13807 G-rich domain on putative tyrosine kinase RBRH_RS12855 PF13614 AAA domain RBRH_RS12860 PF00534 Glycosyl transferases group 1 RBRH_RS12860 PF13439 Glycosyltransferase Family 4 RBRH_RS12865 PF01590 GAF domain RBRH_RS12865 PF02954 Bacterial regulatory protein, Fis family RBRH_RS12865 PF00158 Sigma-54 interaction domain RBRH_RS12870 PF00486 Transcriptional regulatory protein, C terminal RBRH_RS12870 PF00072 Response regulator receiver domain RBRH_RS12875 PF07311 Dodecin RBRH_RS12880 PF02321 Outer membrane efflux protein RBRH_RS12885 PF00873 AcrB/AcrD/AcrF family RBRH_RS12890 PF13533 Biotin-lipoyl like RBRH_RS12895 PF00440 Bacterial regulatory proteins, tetR family RBRH_RS12915 PF00654 Voltage gated chloride channel RBRH_RS12925 PF03601 Conserved hypothetical protein 698 RBRH_RS12930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RBRH_RS12930 PF03466 LysR substrate binding domain RBRH_RS12935 PF00294 pfkB family carbohydrate kinase RBRH_RS12940 PF01569 PAP2 superfamily RBRH_RS12970 PF00925 GTP cyclohydrolase II RBRH_RS12980 PF03922 OmpW family RBRH_RS12985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RBRH_RS12985 PF03466 LysR substrate binding domain RBRH_RS12995 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal RBRH_RS12995 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal RBRH_RS13000 PF00355 Rieske [2Fe-2S] domain RBRH_RS13005 PF00202 Aminotransferase class-III RBRH_RS13010 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) RBRH_RS13050 PF00924 Mechanosensitive ion channel RBRH_RS13055 PF03390 2-hydroxycarboxylate transporter family RBRH_RS13065 PF00550 Phosphopantetheine attachment site RBRH_RS13065 PF00668 Condensation domain RBRH_RS13065 PF13193 AMP-binding enzyme C-terminal domain RBRH_RS13065 PF00501 AMP-binding enzyme RBRH_RS13065 PF00975 Thioesterase domain RBRH_RS13070 PF00106 short chain dehydrogenase RBRH_RS13085 PF00975 Thioesterase domain RBRH_RS13085 PF00550 Phosphopantetheine attachment site RBRH_RS13085 PF00668 Condensation domain RBRH_RS13085 PF13193 AMP-binding enzyme C-terminal domain RBRH_RS13085 PF00501 AMP-binding enzyme RBRH_RS13095 PF01554 MatE RBRH_RS13100 PF00920 Dehydratase family RBRH_RS13105 PF01741 Large-conductance mechanosensitive channel, MscL RBRH_RS13125 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain RBRH_RS13125 PF18413 Neuraminidase-like domain RBRH_RS13130 PF12256 Insecticide toxin TcdB middle/N-terminal region RBRH_RS13130 PF12255 Insecticide toxin TcdB middle/C-terminal region RBRH_RS13130 PF03534 Salmonella virulence plasmid 65kDa B protein RBRH_RS13140 PF03538 Salmonella virulence plasmid 28.1kDa A protein RBRH_RS13155 PF12256 Insecticide toxin TcdB middle/N-terminal region RBRH_RS13155 PF12255 Insecticide toxin TcdB middle/C-terminal region RBRH_RS13155 PF03534 Salmonella virulence plasmid 65kDa B protein RBRH_RS13170 PF01180 Dihydroorotate dehydrogenase RBRH_RS13175 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster RBRH_RS13175 PF13247 4Fe-4S dicluster domain RBRH_RS13175 PF07992 Pyridine nucleotide-disulphide oxidoreductase RBRH_RS13180 PF07687 Peptidase dimerisation domain RBRH_RS13180 PF01546 Peptidase family M20/M25/M40 RBRH_RS13200 PF03167 Uracil DNA glycosylase superfamily RBRH_RS13255 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system RBRH_RS13315 PF01850 PIN domain RBRH_RS13360 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin RBRH_RS13365 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system RBRH_RS13375 PF04221 RelB antitoxin RBRH_RS13435 PF13193 AMP-binding enzyme C-terminal domain RBRH_RS13435 PF00975 Thioesterase domain RBRH_RS13435 PF00501 AMP-binding enzyme RBRH_RS13435 PF00668 Condensation domain RBRH_RS13435 PF00550 Phosphopantetheine attachment site RBRH_RS13440 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RBRH_RS13440 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal RBRH_RS13455 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RBRH_RS13455 PF02770 Acyl-CoA dehydrogenase, middle domain RBRH_RS13455 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RBRH_RS13505 PF01850 PIN domain RBRH_RS13515 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) RBRH_RS13525 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) RBRH_RS13535 PF02371 Transposase IS116/IS110/IS902 family RBRH_RS13535 PF01548 Transposase RBRH_RS13555 PF01654 Cytochrome bd terminal oxidase subunit I RBRH_RS13560 PF02322 Cytochrome bd terminal oxidase subunit II RBRH_RS13575 PF01964 Radical SAM ThiC family RBRH_RS13575 PF13667 ThiC-associated domain RBRH_RS13590 PF00472 RF-1 domain RBRH_RS13595 PF13538 UvrD-like helicase C-terminal domain RBRH_RS13600 PF13361 UvrD-like helicase C-terminal domain RBRH_RS13600 PF12705 PD-(D/E)XK nuclease superfamily RBRH_RS13600 PF00580 UvrD/REP helicase N-terminal domain RBRH_RS13605 PF17946 RecC C-terminal domain RBRH_RS13610 PF12805 FUSC-like inner membrane protein yccS RBRH_RS13615 PF16736 Single Cache-like RBRH_RS13615 PF00512 His Kinase A (phospho-acceptor) domain RBRH_RS13615 PF00989 PAS fold RBRH_RS13615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RBRH_RS13620 PF00360 Phytochrome region RBRH_RS13620 PF08446 PAS fold RBRH_RS13620 PF00512 His Kinase A (phospho-acceptor) domain RBRH_RS13620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RBRH_RS13620 PF01590 GAF domain RBRH_RS13625 PF02464 Competence-damaged protein RBRH_RS13625 PF18146 Damage-inducible protein CinA KH domain RBRH_RS13625 PF00994 Probable molybdopterin binding domain RBRH_RS13635 PF00271 Helicase conserved C-terminal domain RBRH_RS13635 PF11898 Domain of unknown function (DUF3418) RBRH_RS13635 PF04408 Helicase associated domain (HA2) RBRH_RS13635 PF00270 DEAD/DEAH box helicase RBRH_RS13635 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold RBRH_RS13640 PF00696 Amino acid kinase family RBRH_RS13640 PF00583 Acetyltransferase (GNAT) family RBRH_RS13645 PF04362 Bacterial Fe(2+) trafficking RBRH_RS13655 PF18073 Rubredoxin metal binding domain RBRH_RS13660 PF00842 Alanine racemase, C-terminal domain RBRH_RS13660 PF01168 Alanine racemase, N-terminal domain RBRH_RS13665 PF07690 Major Facilitator Superfamily RBRH_RS13670 PF08543 Phosphomethylpyrimidine kinase RBRH_RS13680 PF03167 Uracil DNA glycosylase superfamily RBRH_RS13700 PF00270 DEAD/DEAH box helicase RBRH_RS13700 PF00271 Helicase conserved C-terminal domain RBRH_RS13705 PF00463 Isocitrate lyase family RBRH_RS13715 PF01274 Malate synthase RBRH_RS13730 PF00355 Rieske [2Fe-2S] domain RBRH_RS13740 PF13411 MerR HTH family regulatory protein RBRH_RS13740 PF07739 TipAS antibiotic-recognition domain RBRH_RS13770 PF00440 Bacterial regulatory proteins, tetR family RBRH_RS13785 PF03466 LysR substrate binding domain RBRH_RS13785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RBRH_RS13790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RBRH_RS13790 PF13426 PAS domain RBRH_RS13790 PF00072 Response regulator receiver domain RBRH_RS13805 PF00171 Aldehyde dehydrogenase family RBRH_RS13810 PF00764 Arginosuccinate synthase RBRH_RS13835 PF04352 ProQ/FINO family RBRH_RS13835 PF17516 ProQ C-terminal domain RBRH_RS13840 PF13180 PDZ domain RBRH_RS13850 PF03466 LysR substrate binding domain RBRH_RS13850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RBRH_RS13860 PF00501 AMP-binding enzyme RBRH_RS13860 PF00975 Thioesterase domain RBRH_RS13860 PF00550 Phosphopantetheine attachment site RBRH_RS13860 PF00668 Condensation domain RBRH_RS13860 PF13193 AMP-binding enzyme C-terminal domain RBRH_RS13865 PF17755 UvrA DNA-binding domain RBRH_RS13865 PF17760 UvrA interaction domain RBRH_RS13865 PF00005 ABC transporter RBRH_RS13895 PF13192 Thioredoxin domain RBRH_RS13895 PF07992 Pyridine nucleotide-disulphide oxidoreductase RBRH_RS13905 PF00550 Phosphopantetheine attachment site RBRH_RS13905 PF00668 Condensation domain RBRH_RS13905 PF13193 AMP-binding enzyme C-terminal domain RBRH_RS13905 PF00501 AMP-binding enzyme RBRH_RS13910 PF07690 Major Facilitator Superfamily RBRH_RS13955 PF04794 YdjC-like protein RBRH_RS13990 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding RBRH_RS14010 PF00899 ThiF family RBRH_RS14015 PF08241 Methyltransferase domain RBRH_RS14060 PF01075 Glycosyltransferase family 9 (heptosyltransferase) RBRH_RS14075 PF00149 Calcineurin-like phosphoesterase RBRH_RS14085 PF00230 Major intrinsic protein RBRH_RS14090 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RBRH_RS14090 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RBRH_RS14130 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RBRH_RS14130 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RBRH_RS14130 PF00378 Enoyl-CoA hydratase/isomerase RBRH_RS14135 PF00563 EAL domain RBRH_RS14135 PF00990 Diguanylate cyclase, GGDEF domain RBRH_RS14135 PF03707 Bacterial signalling protein N terminal repeat RBRH_RS14140 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RBRH_RS14140 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain RBRH_RS14145 PF07690 Major Facilitator Superfamily RBRH_RS14190 PF03600 Citrate transporter RBRH_RS14225 PF03551 Transcriptional regulator PadR-like family RBRH_RS14230 PF04954 Siderophore-interacting protein RBRH_RS14230 PF08021 Siderophore-interacting FAD-binding domain RBRH_RS14270 PF02371 Transposase IS116/IS110/IS902 family RBRH_RS14270 PF01548 Transposase RBRH_RS14295 PF03377 TAL effector repeat RBRH_RS14365 PF01145 SPFH domain / Band 7 family RBRH_RS14370 PF07992 Pyridine nucleotide-disulphide oxidoreductase RBRH_RS14410 PF00893 Small Multidrug Resistance protein RBRH_RS14420 PF13249 Squalene-hopene cyclase N-terminal domain RBRH_RS14420 PF13243 Squalene-hopene cyclase C-terminal domain RBRH_RS14435 PF01370 NAD dependent epimerase/dehydratase family RBRH_RS14440 PF06463 Molybdenum Cofactor Synthesis C RBRH_RS14440 PF04055 Radical SAM superfamily RBRH_RS14445 PF02401 LytB protein RBRH_RS14470 PF02780 Transketolase, C-terminal domain RBRH_RS14470 PF02779 Transketolase, pyrimidine binding domain RBRH_RS14470 PF13292 1-deoxy-D-xylulose-5-phosphate synthase RBRH_RS14475 PF00266 Aminotransferase class-V RBRH_RS14480 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RBRH_RS14480 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RBRH_RS14490 PF12804 MobA-like NTP transferase domain RBRH_RS14490 PF00132 Bacterial transferase hexapeptide (six repeats) RBRH_RS14490 PF14602 Hexapeptide repeat of succinyl-transferase RBRH_RS14525 PF00512 His Kinase A (phospho-acceptor) domain RBRH_RS14525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RBRH_RS14530 PF02954 Bacterial regulatory protein, Fis family RBRH_RS14530 PF00072 Response regulator receiver domain RBRH_RS14530 PF00158 Sigma-54 interaction domain RBRH_RS14540 PF00528 Binding-protein-dependent transport system inner membrane component RBRH_RS14545 PF04069 Substrate binding domain of ABC-type glycine betaine transport system RBRH_RS14550 PF00528 Binding-protein-dependent transport system inner membrane component RBRH_RS14555 PF00005 ABC transporter RBRH_RS14555 PF00571 CBS domain RBRH_RS14560 PF00293 NUDIX domain RBRH_RS14570 PF13609 Gram-negative porin RBRH_RS14575 PF02669 K+-transporting ATPase, c chain RBRH_RS14585 PF03814 Potassium-transporting ATPase A subunit RBRH_RS14610 PF00571 CBS domain RBRH_RS14615 PF03167 Uracil DNA glycosylase superfamily RBRH_RS14635 PF04754 Putative transposase, YhgA-like RBRH_RS14660 PF13085 2Fe-2S iron-sulfur cluster binding domain RBRH_RS14670 PF00682 HMGL-like RBRH_RS14675 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RBRH_RS14675 PF00364 Biotin-requiring enzyme RBRH_RS14675 PF02785 Biotin carboxylase C-terminal domain RBRH_RS14675 PF00289 Biotin carboxylase, N-terminal domain RBRH_RS14680 PF00378 Enoyl-CoA hydratase/isomerase RBRH_RS14685 PF01039 Carboxyl transferase domain RBRH_RS14690 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RBRH_RS14690 PF02770 Acyl-CoA dehydrogenase, middle domain RBRH_RS14690 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RBRH_RS14745 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase RBRH_RS14760 PF00378 Enoyl-CoA hydratase/isomerase RBRH_RS14760 PF00551 Formyl transferase RBRH_RS14760 PF02911 Formyl transferase, C-terminal domain RBRH_RS14780 PF00550 Phosphopantetheine attachment site RBRH_RS14815 PF13545 Crp-like helix-turn-helix domain RBRH_RS14815 PF00027 Cyclic nucleotide-binding domain RBRH_RS14825 PF00563 EAL domain RBRH_RS14825 PF12792 CSS motif domain associated with EAL RBRH_RS14850 PF01627 Hpt domain RBRH_RS14850 PF00486 Transcriptional regulatory protein, C terminal RBRH_RS14850 PF00072 Response regulator receiver domain RBRH_RS14855 PF00263 Bacterial type II and III secretion system protein RBRH_RS14855 PF03958 Bacterial type II/III secretion system short domain RBRH_RS14860 PF12833 Helix-turn-helix domain RBRH_RS14875 PF01311 Bacterial export proteins, family 1 RBRH_RS14885 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RBRH_RS14885 PF02874 ATP synthase alpha/beta family, beta-barrel domain RBRH_RS14885 PF18269 T3SS EscN ATPase C-terminal domain RBRH_RS14890 PF02108 Flagellar assembly protein FliH RBRH_RS14900 PF01514 Secretory protein of YscJ/FliF family RBRH_RS14915 PF01312 FlhB HrpN YscU SpaS Family RBRH_RS14920 PF00771 FHIPEP family RBRH_RS14935 PF00813 FliP family RBRH_RS14940 PF01313 Bacterial export proteins, family 3 RBRH_RS15000 PF06052 3-hydroxyanthranilic acid dioxygenase RBRH_RS15005 PF01042 Endoribonuclease L-PSP RBRH_RS15010 PF00171 Aldehyde dehydrogenase family RBRH_RS15020 PF08240 Alcohol dehydrogenase GroES-like domain RBRH_RS15020 PF00107 Zinc-binding dehydrogenase RBRH_RS15025 PF00155 Aminotransferase class I and II RBRH_RS15050 PF13614 AAA domain RBRH_RS15055 PF03960 ArsC family RBRH_RS15065 PF01048 Phosphorylase superfamily RBRH_RS15085 PF03466 LysR substrate binding domain RBRH_RS15085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RBRH_RS15090 PF07859 alpha/beta hydrolase fold RBRH_RS15100 PF00873 AcrB/AcrD/AcrF family RBRH_RS15110 PF13439 Glycosyltransferase Family 4 RBRH_RS15110 PF00534 Glycosyl transferases group 1 RBRH_RS15120 PF02954 Bacterial regulatory protein, Fis family RBRH_RS15120 PF00158 Sigma-54 interaction domain RBRH_RS15120 PF01590 GAF domain RBRH_RS15125 PF01513 ATP-NAD kinase RBRH_RS15130 PF00676 Dehydrogenase E1 component RBRH_RS15140 PF00561 alpha/beta hydrolase fold RBRH_RS15140 PF00364 Biotin-requiring enzyme RBRH_RS15145 PF04055 Radical SAM superfamily RBRH_RS15160 PF02665 Nitrate reductase gamma subunit RBRH_RS15165 PF07690 Major Facilitator Superfamily RBRH_RS15190 PF03466 LysR substrate binding domain RBRH_RS15190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RBRH_RS15205 PF13416 Bacterial extracellular solute-binding protein RBRH_RS15215 PF00528 Binding-protein-dependent transport system inner membrane component RBRH_RS15220 PF00578 AhpC/TSA family RBRH_RS15220 PF10417 C-terminal domain of 1-Cys peroxiredoxin RBRH_RS15225 PF13192 Thioredoxin domain RBRH_RS15225 PF07992 Pyridine nucleotide-disulphide oxidoreductase RBRH_RS15240 PF03706 Lysylphosphatidylglycerol synthase TM region RBRH_RS15240 PF09924 Uncharacterised conserved protein (DUF2156) RBRH_RS15255 PF01235 Sodium:alanine symporter family RBRH_RS15325 PF02195 ParB-like nuclease domain RBRH_RS15325 PF17762 HTH domain found in ParB protein RBRH_RS15330 PF13614 AAA domain RBRH_RS15350 PF00589 Phage integrase family RBRH_RS15350 PF02899 Phage integrase, N-terminal SAM-like domain RBRH_RS15375 PF13614 AAA domain RBRH_RS15380 PF02195 ParB-like nuclease domain RBRH_RS15380 PF17762 HTH domain found in ParB protein RBRH_RS15455 PF04754 Putative transposase, YhgA-like RBRH_RS15480 PF01555 DNA methylase RBRH_RS15495 PF05973 Phage derived protein Gp49-like (DUF891) RBRH_RS15500 PF01381 Helix-turn-helix RBRH_RS15530 PF00072 Response regulator receiver domain RBRH_RS15535 PF01464 Transglycosylase SLT domain RBRH_RS15565 PF03743 Bacterial conjugation TrbI-like protein RBRH_RS15570 PF10411 Disulfide bond isomerase protein N-terminus RBRH_RS15570 PF13098 Thioredoxin-like domain RBRH_RS15580 PF11130 F pilus assembly Type-IV secretion system for plasmid transfer RBRH_RS15590 PF10502 Signal peptidase, peptidase S26 RBRH_RS15600 PF06834 TraU protein RBRH_RS15615 PF06986 Type-1V conjugative transfer system mating pair stabilisation RBRH_RS15630 PF06122 Conjugative relaxosome accessory transposon protein RBRH_RS15650 PF01435 Peptidase family M48 RBRH_RS15695 PF01695 IstB-like ATP binding protein RBRH_RS15730 PF02811 PHP domain RBRH_RS15730 PF07733 Bacterial DNA polymerase III alpha NTPase domain RBRH_RS15730 PF17657 Bacterial DNA polymerase III alpha subunit finger domain RBRH_RS15730 PF14579 Helix-hairpin-helix motif RBRH_RS15760 PF03377 TAL effector repeat RBRH_RS15765 PF03377 TAL effector repeat RBRH_RS15775 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH RBRH_RS15780 PF06067 Domain of unknown function (DUF932) RBRH_RS15820 PF01381 Helix-turn-helix RBRH_RS15840 PF01381 Helix-turn-helix RBRH_RS15855 PF03390 2-hydroxycarboxylate transporter family RBRH_RS15870 PF05598 Transposase domain (DUF772) RBRH_RS15895 PF02899 Phage integrase, N-terminal SAM-like domain RBRH_RS15895 PF00589 Phage integrase family RBRH_RS15910 PF13396 Phospholipase_D-nuclease N-terminal RBRH_RS15910 PF13091 PLD-like domain RBRH_RS15940 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system RBRH_RS15945 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin RBRH_RS16005 PF02796 Helix-turn-helix domain of resolvase RBRH_RS16005 PF00665 Integrase core domain RBRH_RS16025 PF01695 IstB-like ATP binding protein RBRH_RS16030 PF00665 Integrase core domain RBRH_RS16035 PF02371 Transposase IS116/IS110/IS902 family RBRH_RS16035 PF01548 Transposase RBRH_RS16105 PF07484 Phage Tail Collar Domain RBRH_RS16115 PF01609 Transposase DDE domain RBRH_RS16115 PF05598 Transposase domain (DUF772) RBRH_RS16135 PF03900 Porphobilinogen deaminase, C-terminal domain RBRH_RS16135 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain RBRH_RS16185 PF08774 VRR-NUC domain RBRH_RS16185 PF18081 Fanconi anemia-associated nuclease SAP domain RBRH_RS16225 PF04829 Pre-toxin domain with VENN motif RBRH_RS16225 PF13018 Extended Signal Peptide of Type V secretion system RBRH_RS16225 PF05860 haemagglutination activity domain RBRH_RS16225 PF13332 Hemagglutinin repeat RBRH_RS16260 PF00668 Condensation domain RBRH_RS16260 PF13193 AMP-binding enzyme C-terminal domain RBRH_RS16260 PF00550 Phosphopantetheine attachment site RBRH_RS16260 PF00501 AMP-binding enzyme RBRH_RS16335 PF08460 Bacterial SH3 domain RBRH_RS16335 PF01551 Peptidase family M23 RBRH_RS16395 PF01556 DnaJ C terminal domain RBRH_RS16395 PF00684 DnaJ central domain RBRH_RS16395 PF00226 DnaJ domain RBRH_RS16425 PF18807 Tripartite Tc toxins repeat RBRH_RS16425 PF05785 Rho-activating domain of cytotoxic necrotizing factor RBRH_RS16430 PF18413 Neuraminidase-like domain RBRH_RS16430 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain RBRH_RS16435 PF18413 Neuraminidase-like domain RBRH_RS16435 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain RBRH_RS16440 PF18807 Tripartite Tc toxins repeat RBRH_RS16440 PF14431 YwqJ-like deaminase RBRH_RS16555 PF13193 AMP-binding enzyme C-terminal domain RBRH_RS16555 PF00501 AMP-binding enzyme RBRH_RS16555 PF00550 Phosphopantetheine attachment site RBRH_RS16555 PF00668 Condensation domain RBRH_RS16680 PF03449 Transcription elongation factor, N-terminal RBRH_RS16680 PF01272 Transcription elongation factor, GreA/GreB, C-term RBRH_RS16710 PF07043 Protein of unknown function (DUF1328) RBRH_RS16740 PF13193 AMP-binding enzyme C-terminal domain RBRH_RS16740 PF00501 AMP-binding enzyme RBRH_RS16740 PF00550 Phosphopantetheine attachment site RBRH_RS16740 PF00668 Condensation domain RBRH_RS16750 PF13491 4TM region of DNA translocase FtsK/SpoIIIE RBRH_RS16750 PF01580 FtsK/SpoIIIE family RBRH_RS16750 PF09397 Ftsk gamma domain RBRH_RS16750 PF17854 FtsK alpha domain RBRH_RS16800 PF13193 AMP-binding enzyme C-terminal domain RBRH_RS16800 PF00668 Condensation domain RBRH_RS16800 PF00550 Phosphopantetheine attachment site RBRH_RS16800 PF00975 Thioesterase domain RBRH_RS16800 PF00501 AMP-binding enzyme RBRH_RS16810 PF00668 Condensation domain RBRH_RS16810 PF13193 AMP-binding enzyme C-terminal domain RBRH_RS16810 PF13193 AMP-binding enzyme C-terminal domain RBRH_RS16810 PF00550 Phosphopantetheine attachment site RBRH_RS16810 PF00550 Phosphopantetheine attachment site RBRH_RS16810 PF00501 AMP-binding enzyme RBRH_RS16810 PF00501 AMP-binding enzyme RBRH_RS16810 PF00668 Condensation domain RBRH_RS17055 PF02581 Thiamine monophosphate synthase RBRH_RS17130 PF02803 Thiolase, C-terminal domain RBRH_RS17130 PF00108 Thiolase, N-terminal domain RBRH_RS17140 PF01479 S4 domain RBRH_RS17140 PF00849 RNA pseudouridylate synthase RBRH_RS17190 PF07971 Glycosyl hydrolase family 92 RBRH_RS17190 PF17678 Glycosyl hydrolase family 92 N-terminal domain RBRH_RS17195 PF07971 Glycosyl hydrolase family 92 RBRH_RS17195 PF17678 Glycosyl hydrolase family 92 N-terminal domain RBRH_RS17375 PF13439 Glycosyltransferase Family 4 RBRH_RS17375 PF00534 Glycosyl transferases group 1 RBRH_RS17430 PF02881 SRP54-type protein, helical bundle domain RBRH_RS17430 PF00448 SRP54-type protein, GTPase domain RBRH_RS17435 PF08173 Membrane bound YbgT-like protein RBRH_RS17450 PF02607 B12 binding domain RBRH_RS17450 PF02965 Vitamin B12 dependent methionine synthase, activation domain RBRH_RS17450 PF00809 Pterin binding enzyme RBRH_RS17450 PF02574 Homocysteine S-methyltransferase RBRH_RS17450 PF02310 B12 binding domain RBRH_RS17620 PF02371 Transposase IS116/IS110/IS902 family RBRH_RS17620 PF01548 Transposase RBRH_RS17695 PF04221 RelB antitoxin RBRH_RS17725 PF01165 Ribosomal protein S21 RBRH_RS17735 PF00550 Phosphopantetheine attachment site RBRH_RS17735 PF00668 Condensation domain RBRH_RS17735 PF13193 AMP-binding enzyme C-terminal domain RBRH_RS17735 PF00501 AMP-binding enzyme RBRH_RS17750 PF02515 CoA-transferase family III RBRH_RS17835 PF00550 Phosphopantetheine attachment site RBRH_RS17835 PF00501 AMP-binding enzyme RBRH_RS17835 PF13193 AMP-binding enzyme C-terminal domain RBRH_RS17835 PF00668 Condensation domain RBRH_RS17840 PF00501 AMP-binding enzyme RBRH_RS17840 PF13193 AMP-binding enzyme C-terminal domain RBRH_RS17990 PF00550 Phosphopantetheine attachment site RBRH_RS17990 PF00501 AMP-binding enzyme RBRH_RS17990 PF13193 AMP-binding enzyme C-terminal domain RBRH_RS17990 PF00668 Condensation domain RBRH_RS18065 PF00589 Phage integrase family RBRH_RS18135 PF00221 Aromatic amino acid lyase RBRH_RS18140 PF00668 Condensation domain RBRH_RS18140 PF13193 AMP-binding enzyme C-terminal domain RBRH_RS18140 PF00975 Thioesterase domain RBRH_RS18140 PF00501 AMP-binding enzyme RBRH_RS18140 PF00550 Phosphopantetheine attachment site RBRH_RS18175 PF03895 YadA-like membrane anchor domain RBRH_RS18175 PF05662 Coiled stalk of trimeric autotransporter adhesin RBRH_RS18175 PF13018 Extended Signal Peptide of Type V secretion system RBRH_RS18175 PF05658 Head domain of trimeric autotransporter adhesin RBRH_RS18185 PF17209 Hfq protein RBRH_RS18230 PF00005 ABC transporter RBRH_RS18230 PF08402 TOBE domain RBRH_RS18415 PF00816 H-NS histone family RBRH_RS18675 PF00347 Ribosomal protein L6 RBRH_RS18765 PF04055 Radical SAM superfamily RBRH_RS18765 PF06969 HemN C-terminal domain RBRH_RS18835 PF05598 Transposase domain (DUF772) RBRH_RS18840 PF17678 Glycosyl hydrolase family 92 N-terminal domain RBRH_RS18840 PF07971 Glycosyl hydrolase family 92 RBRH_RS18940 PF03390 2-hydroxycarboxylate transporter family RBRH_RS18960 PF03972 MmgE/PrpD family RBRH_RS18985 PF12838 4Fe-4S dicluster domain RBRH_RS19025 PF01613 Flavin reductase like domain RBRH_RS19050 PF00873 AcrB/AcrD/AcrF family RBRH_RS19170 PF04996 Succinylarginine dihydrolase RBRH_RS19230 PF00582 Universal stress protein family RBRH_RS19310 PF00814 Glycoprotease family RBRH_RS19625 PF00929 Exonuclease RBRH_RS19625 PF07733 Bacterial DNA polymerase III alpha NTPase domain RBRH_RS19625 PF17657 Bacterial DNA polymerase III alpha subunit finger domain RBRH_RS19625 PF02811 PHP domain RBRH_RS19625 PF14579 Helix-hairpin-helix motif RBRH_RS19760 PF00872 Transposase, Mutator family RBRH_RS19775 PF00301 Rubredoxin RBRH_RS19800 PF01527 Transposase