RE97_RS00005	SM00382	ATPases associated with a variety of cellular activities
RE97_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
RE97_RS00010	SM00480	DNA polymerase III beta subunit
RE97_RS00025	SM00387	Histidine kinase-like ATPases
RE97_RS00025	SM00433	TopoisomeraseII
RE97_RS00030	SM00434	DNA Topoisomerase IV
RE97_RS00060	SM00342	helix_turn_helix, arabinose operon control protein
RE97_RS00110	SM00833	Cobalamin synthesis protein cobW C-terminal domain
RE97_RS00145	SM00823	Phosphopantetheine attachment site
RE97_RS00165	SM00382	ATPases associated with a variety of cellular activities
RE97_RS00170	SM00382	ATPases associated with a variety of cellular activities
RE97_RS00200	SM00382	ATPases associated with a variety of cellular activities
RE97_RS00290	SM00796	Allophanate hydrolase subunit 1
RE97_RS00295	SM00797	Allophanate hydrolase subunit 2
RE97_RS00305	SM00862	Transcriptional regulatory protein, C terminal
RE97_RS00355	SM00903	Flavin reductase like domain
RE97_RS00380	SM00822	RE97_RS00380
RE97_RS00425	SM01060	RE97_RS00425
RE97_RS00430	SM01060	RE97_RS00430
RE97_RS00650	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
RE97_RS00695	SM01217	RE97_RS00695
RE97_RS00820	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RE97_RS00820	SM00895	RE97_RS00820
RE97_RS00835	SM00829	Enoylreductase
RE97_RS00850	SM00822	RE97_RS00850
RE97_RS00955	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
RE97_RS00955	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
RE97_RS00980	SM00822	RE97_RS00980
RE97_RS01115	SM01012	RE97_RS01115
RE97_RS01150	SM00347	helix_turn_helix multiple antibiotic resistance protein
RE97_RS01155	SM00382	ATPases associated with a variety of cellular activities
RE97_RS01180	SM00642	Alpha-amylase domain
RE97_RS01185	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
RE97_RS01195	SM00382	ATPases associated with a variety of cellular activities
RE97_RS01195	SM00838	Elongation factor G C-terminus
RE97_RS01195	SM00889	Elongation factor G, domain IV
RE97_RS01230	SM00829	Enoylreductase
RE97_RS01265	SM00822	RE97_RS01265
RE97_RS01290	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RE97_RS01290	SM00866	RE97_RS01290
RE97_RS01300	SM00822	RE97_RS01300
RE97_RS01305	SM00829	Enoylreductase
RE97_RS01335	SM01110	RE97_RS01335
RE97_RS01390	SM00825	Beta-ketoacyl synthase
RE97_RS01405	SM00822	RE97_RS01405
RE97_RS01410	SM00855	Phosphoglycerate mutase family
RE97_RS01435	SM00481	DNA polymerase alpha chain like domain
RE97_RS01455	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RE97_RS01455	SM00387	Histidine kinase-like ATPases
RE97_RS01460	SM00960	Roadblock/LC7 domain
RE97_RS01485	SM00240	Forkhead associated domain
RE97_RS01485	SM00382	ATPases associated with a variety of cellular activities
RE97_RS01490	SM00240	Forkhead associated domain
RE97_RS01490	SM00382	ATPases associated with a variety of cellular activities
RE97_RS01545	SM01329	RE97_RS01545
RE97_RS01630	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
RE97_RS01640	SM00530	Helix-turn-helix XRE-family like proteins 
RE97_RS01650	SM00327	von Willebrand factor (vWF) type A domain
RE97_RS01655	SM00327	von Willebrand factor (vWF) type A domain
RE97_RS01685	SM01110	RE97_RS01685
RE97_RS01750	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
RE97_RS01750	SM01232	RE97_RS01750
RE97_RS01755	SM00382	ATPases associated with a variety of cellular activities
RE97_RS01755	SM00487	DEAD-like helicases superfamily
RE97_RS01755	SM00490	helicase superfamily c-terminal domain
RE97_RS01770	SM01150	RE97_RS01770
RE97_RS01775	SM00344	helix_turn_helix ASNC type
RE97_RS01810	SM00878	Biotin carboxylase C-terminal domain
RE97_RS01820	SM00450	Rhodanese Homology Domain
RE97_RS01865	SM01001	AIR carboxylase
RE97_RS01880	SM00387	Histidine kinase-like ATPases
RE97_RS01880	SM00388	His Kinase A (phosphoacceptor) domain
RE97_RS01885	SM00448	cheY-homologous receiver domain
RE97_RS02025	SM00996	S-adenosyl-L-homocysteine hydrolase
RE97_RS02025	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
RE97_RS02035	SM00448	cheY-homologous receiver domain
RE97_RS02035	SM00862	Transcriptional regulatory protein, C terminal
RE97_RS02040	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RE97_RS02040	SM00387	Histidine kinase-like ATPases
RE97_RS02040	SM00388	His Kinase A (phosphoacceptor) domain
RE97_RS02045	SM00909	Sporulation and spore germination
RE97_RS02060	SM00957	SecA DEAD-like domain
RE97_RS02060	SM00958	SecA preprotein cross-linking domain
RE97_RS02070	SM00421	helix_turn_helix, Lux Regulon
RE97_RS02175	SM00507	HNH nucleases
RE97_RS02195	SM00849	Metallo-beta-lactamase superfamily
RE97_RS02235	SM00387	Histidine kinase-like ATPases
RE97_RS02235	SM00911	HWE histidine kinase
RE97_RS02245	SM00046	Diacylglycerol kinase catalytic domain (presumed)
RE97_RS02265	SM00855	Phosphoglycerate mutase family
RE97_RS02280	SM00487	DEAD-like helicases superfamily
RE97_RS02280	SM00490	helicase superfamily c-terminal domain
RE97_RS02305	SM00235	Zinc-dependent metalloprotease
RE97_RS02310	SM00450	Rhodanese Homology Domain
RE97_RS02360	SM00341	Helicase and RNase D C-terminal
RE97_RS02470	SM00421	helix_turn_helix, Lux Regulon
RE97_RS02470	SM00448	cheY-homologous receiver domain
RE97_RS02490	SM00421	helix_turn_helix, Lux Regulon
RE97_RS02490	SM00448	cheY-homologous receiver domain
RE97_RS02495	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
RE97_RS02495	SM00387	Histidine kinase-like ATPases
RE97_RS02500	SM01012	RE97_RS02500
RE97_RS02510	SM00422	helix_turn_helix, mercury resistance
RE97_RS02525	SM01012	RE97_RS02525
RE97_RS02535	SM00642	Alpha-amylase domain
RE97_RS02540	SM00822	RE97_RS02540
RE97_RS02565	SM00986	Uracil DNA glycosylase superfamily
RE97_RS02565	SM00987	UreE urease accessory protein, C-terminal domain 
RE97_RS02575	SM00984	UDP binding domain
RE97_RS02685	SM01060	RE97_RS02685
RE97_RS02700	SM00091	PAS domain
RE97_RS02700	SM00138	Methyltransferase, chemotaxis proteins 
RE97_RS02715	SM00342	helix_turn_helix, arabinose operon control protein
RE97_RS02765	SM00507	HNH nucleases
RE97_RS02840	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
RE97_RS02840	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
RE97_RS02845	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
RE97_RS02880	SM00867	YceI-like domain 
RE97_RS02930	SM00829	Enoylreductase
RE97_RS02965	SM00244	prohibitin homologues
RE97_RS03000	SM00937	RE97_RS03000
RE97_RS03015	SM00382	ATPases associated with a variety of cellular activities
RE97_RS03075	SM00155	Phospholipase D. Active site motifs.
RE97_RS03120	SM00507	HNH nucleases
RE97_RS03130	SM01006	Siderophore biosynthesis protein domain
RE97_RS03200	SM00347	helix_turn_helix multiple antibiotic resistance protein
RE97_RS03210	SM00822	RE97_RS03210
RE97_RS03235	SM01192	RE97_RS03235
RE97_RS03235	SM01193	RE97_RS03235
RE97_RS03240	SM00382	ATPases associated with a variety of cellular activities
RE97_RS03350	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RE97_RS03350	SM00895	RE97_RS03350
RE97_RS03360	SM00917	LeuA allosteric (dimerisation) domain
RE97_RS03375	SM00822	RE97_RS03375
RE97_RS03440	SM00829	Enoylreductase
RE97_RS03460	SM00382	ATPases associated with a variety of cellular activities
RE97_RS03520	SM01240	RE97_RS03520
RE97_RS03525	SM00347	helix_turn_helix multiple antibiotic resistance protein
RE97_RS03610	SM00893	Electron transfer flavoprotein domain
RE97_RS03615	SM00893	Electron transfer flavoprotein domain
RE97_RS03625	SM00563	Phosphate acyltransferases
RE97_RS03650	SM00278	Helix-hairpin-helix DNA-binding motif class 1
RE97_RS03650	SM00292	breast cancer carboxy-terminal domain
RE97_RS03650	SM00532	Ligase N family
RE97_RS03710	SM00845	GatB domain
RE97_RS03760	SM01329	RE97_RS03760
RE97_RS03795	SM00346	helix_turn_helix isocitrate lyase regulation
RE97_RS03810	SM00411	bacterial (prokaryotic) histone like domain
RE97_RS03815	SM00855	Phosphoglycerate mutase family
RE97_RS03850	SM00986	Uracil DNA glycosylase superfamily
RE97_RS03850	SM00987	UreE urease accessory protein, C-terminal domain 
RE97_RS03890	SM01120	RE97_RS03890
RE97_RS03890	SM01121	RE97_RS03890
RE97_RS03895	SM00487	DEAD-like helicases superfamily
RE97_RS03895	SM00490	helicase superfamily c-terminal domain
RE97_RS03920	SM00756	RE97_RS03920
RE97_RS03965	SM00358	Double-stranded RNA binding motif
RE97_RS03965	SM00535	Ribonuclease III family
RE97_RS03970	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
RE97_RS03970	SM01232	RE97_RS03970
RE97_RS03990	SM00968	SMC proteins Flexible Hinge Domain
RE97_RS03995	SM00382	ATPases associated with a variety of cellular activities
RE97_RS03995	SM00962	SRP54-type protein, GTPase domain
RE97_RS03995	SM00963	SRP54-type protein, helical bundle domain
RE97_RS04005	SM00938	Nitrogen regulatory protein P-II
RE97_RS04010	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
RE97_RS04015	SM00487	DEAD-like helicases superfamily
RE97_RS04025	SM00382	ATPases associated with a variety of cellular activities
RE97_RS04025	SM00962	SRP54-type protein, GTPase domain
RE97_RS04025	SM00963	SRP54-type protein, helical bundle domain
RE97_RS04100	SM01012	RE97_RS04100
RE97_RS04135	SM00382	ATPases associated with a variety of cellular activities
RE97_RS04185	SM00347	helix_turn_helix multiple antibiotic resistance protein
RE97_RS04205	SM00563	Phosphate acyltransferases
RE97_RS04210	SM00862	Transcriptional regulatory protein, C terminal
RE97_RS04235	SM00729	Elongator protein 3, MiaB family, Radical SAM
RE97_RS04255	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
RE97_RS04295	SM01230	RE97_RS04295
RE97_RS04355	SM00327	von Willebrand factor (vWF) type A domain
RE97_RS04355	SM00382	ATPases associated with a variety of cellular activities
RE97_RS04405	SM00316	Ribosomal protein S1-like RNA-binding domain
RE97_RS04450	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
RE97_RS04490	SM00904	Riboflavin kinase
RE97_RS04495	SM01387	RE97_RS04495
RE97_RS04500	SM00316	Ribosomal protein S1-like RNA-binding domain
RE97_RS04500	SM00322	K homology RNA-binding domain
RE97_RS04515	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
RE97_RS04515	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
RE97_RS04530	SM00822	RE97_RS04530
RE97_RS04555	SM00507	HNH nucleases
RE97_RS04590	SM00878	Biotin carboxylase C-terminal domain
RE97_RS04640	SM01130	RE97_RS04640
RE97_RS04645	SM00849	Metallo-beta-lactamase superfamily
RE97_RS04665	SM00843	RE97_RS04665
RE97_RS04680	SM00530	Helix-turn-helix XRE-family like proteins 
RE97_RS04725	SM00382	ATPases associated with a variety of cellular activities
RE97_RS04735	SM00729	Elongator protein 3, MiaB family, Radical SAM
RE97_RS04790	SM00257	Lysin motif
RE97_RS04835	SM00529	Helix-turn-helix diphteria tox regulatory element
RE97_RS04835	SM00899	RE97_RS04835
RE97_RS04955	SM00116	Domain in cystathionine beta-synthase and other proteins.
RE97_RS04960	SM00861	Transketolase, pyrimidine binding domain
RE97_RS04965	SM00341	Helicase and RNase D C-terminal
RE97_RS04965	SM00474	3'-5' exonuclease
RE97_RS05115	SM00346	helix_turn_helix isocitrate lyase regulation
RE97_RS05305	SM00822	RE97_RS05305
RE97_RS05310	SM01060	RE97_RS05310
RE97_RS05340	SM00346	helix_turn_helix isocitrate lyase regulation
RE97_RS05345	SM01007	Class II Aldolase and Adducin N-terminal domain
RE97_RS05460	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
RE97_RS05555	SM00670	Large family of predicted nucleotide-binding domains
RE97_RS05565	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
RE97_RS05565	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RE97_RS05635	SM00507	HNH nucleases
RE97_RS05685	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
RE97_RS05695	SM01350	RE97_RS05695
RE97_RS05775	SM00327	von Willebrand factor (vWF) type A domain
RE97_RS05795	SM00822	RE97_RS05795
RE97_RS05855	SM00822	RE97_RS05855
RE97_RS05875	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RE97_RS05930	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
RE97_RS05950	SM00838	Elongation factor G C-terminus
RE97_RS05975	SM00729	Elongator protein 3, MiaB family, Radical SAM
RE97_RS06215	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
RE97_RS06230	SM00382	ATPases associated with a variety of cellular activities
RE97_RS06255	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
RE97_RS06280	SM00116	Domain in cystathionine beta-synthase and other proteins.
RE97_RS06280	SM00924	MgtE intracellular N domain
RE97_RS06310	SM00382	ATPases associated with a variety of cellular activities
RE97_RS06335	SM00919	Malic enzyme, NAD binding domain
RE97_RS06335	SM01274	RE97_RS06335
RE97_RS06345	SM00822	RE97_RS06345
RE97_RS06350	SM00822	RE97_RS06350
RE97_RS06355	SM00861	Transketolase, pyrimidine binding domain
RE97_RS06385	SM00822	RE97_RS06385
RE97_RS06405	SM00822	RE97_RS06405
RE97_RS06435	SM00487	DEAD-like helicases superfamily
RE97_RS06435	SM00490	helicase superfamily c-terminal domain
RE97_RS06465	SM00986	Uracil DNA glycosylase superfamily
RE97_RS06465	SM00987	UreE urease accessory protein, C-terminal domain 
RE97_RS06480	SM00052	Putative diguanylate phosphodiesterase
RE97_RS06480	SM00267	diguanylate cyclase
RE97_RS06505	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
RE97_RS06520	SM00240	Forkhead associated domain
RE97_RS06520	SM00862	Transcriptional regulatory protein, C terminal
RE97_RS06520	SM01043	Bacterial transcriptional activator domain
RE97_RS06530	SM00382	ATPases associated with a variety of cellular activities
RE97_RS06535	SM00382	ATPases associated with a variety of cellular activities
RE97_RS06550	SM00855	Phosphoglycerate mutase family
RE97_RS06555	SM00507	HNH nucleases
RE97_RS06580	SM00382	ATPases associated with a variety of cellular activities
RE97_RS06595	SM00947	Carbonic anhydrase
RE97_RS06685	SM00836	DALR anticodon binding domain
RE97_RS06685	SM01016	Arginyl tRNA synthetase N terminal dom
RE97_RS06715	SM00357	Cold shock protein domain
RE97_RS06715	SM00382	ATPases associated with a variety of cellular activities
RE97_RS06725	SM00937	RE97_RS06725
RE97_RS06780	SM00382	ATPases associated with a variety of cellular activities
RE97_RS06835	SM00342	helix_turn_helix, arabinose operon control protein
RE97_RS06835	SM00478	endonuclease III
RE97_RS06835	SM01009	AlkA N-terminal domain
RE97_RS06855	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
RE97_RS06855	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RE97_RS06885	SM00642	Alpha-amylase domain
RE97_RS06900	SM00487	DEAD-like helicases superfamily
RE97_RS06900	SM00491	RE97_RS06900
RE97_RS06935	SM00849	Metallo-beta-lactamase superfamily
RE97_RS06985	SM00382	ATPases associated with a variety of cellular activities
RE97_RS06990	SM00382	ATPases associated with a variety of cellular activities
RE97_RS07015	SM00822	RE97_RS07015
RE97_RS07035	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RE97_RS07035	SM00895	RE97_RS07035
RE97_RS07095	SM01130	RE97_RS07095
RE97_RS07150	SM00822	RE97_RS07150
RE97_RS07265	SM00331	Sigma factor PP2C-like phosphatases
RE97_RS07325	SM00822	RE97_RS07325
RE97_RS07330	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RE97_RS07330	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
RE97_RS07330	SM00895	RE97_RS07330
RE97_RS07390	SM00422	helix_turn_helix, mercury resistance
RE97_RS07400	SM00825	Beta-ketoacyl synthase
RE97_RS07400	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
RE97_RS07470	SM00479	RE97_RS07470
RE97_RS07505	SM00878	Biotin carboxylase C-terminal domain
RE97_RS07530	SM00861	Transketolase, pyrimidine binding domain
RE97_RS07550	SM01110	RE97_RS07550
RE97_RS07580	SM00563	Phosphate acyltransferases
RE97_RS07585	SM00563	Phosphate acyltransferases
RE97_RS07600	SM00382	ATPases associated with a variety of cellular activities
RE97_RS07625	SM00642	Alpha-amylase domain
RE97_RS07635	SM00507	HNH nucleases
RE97_RS07665	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
RE97_RS07665	SM01232	RE97_RS07665
RE97_RS07705	SM00382	ATPases associated with a variety of cellular activities
RE97_RS07705	SM00994	ClpX C4-type zinc finger
RE97_RS07705	SM01086	C-terminal, D2-small domain, of ClpB protein
RE97_RS07750	SM00562	RE97_RS07750
RE97_RS07755	SM00316	Ribosomal protein S1-like RNA-binding domain
RE97_RS07775	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
RE97_RS07830	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RE97_RS07830	SM00866	RE97_RS07830
RE97_RS07840	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
RE97_RS07840	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RE97_RS07850	SM00100	Cyclic nucleotide-monophosphate binding domain
RE97_RS07860	SM00382	ATPases associated with a variety of cellular activities
RE97_RS07880	SM00855	Phosphoglycerate mutase family
RE97_RS07940	SM00822	RE97_RS07940
RE97_RS07940	SM00823	Phosphopantetheine attachment site
RE97_RS07940	SM00825	Beta-ketoacyl synthase
RE97_RS07940	SM00826	RE97_RS07940
RE97_RS07940	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
RE97_RS07940	SM00829	Enoylreductase
RE97_RS07940	SM01294	RE97_RS07940
RE97_RS07960	SM00278	Helix-hairpin-helix DNA-binding motif class 1
RE97_RS08000	SM00849	Metallo-beta-lactamase superfamily
RE97_RS08005	SM00116	Domain in cystathionine beta-synthase and other proteins.
RE97_RS08015	SM00838	Elongation factor G C-terminus
RE97_RS08050	SM00382	ATPases associated with a variety of cellular activities
RE97_RS08065	SM00729	Elongator protein 3, MiaB family, Radical SAM
RE97_RS08095	SM00422	helix_turn_helix, mercury resistance
RE97_RS08220	SM00823	Phosphopantetheine attachment site
RE97_RS08230	SM00825	Beta-ketoacyl synthase
RE97_RS08235	SM00822	RE97_RS08235
RE97_RS08235	SM00823	Phosphopantetheine attachment site
RE97_RS08235	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
RE97_RS08245	SM00823	Phosphopantetheine attachment site
RE97_RS08245	SM01294	RE97_RS08245
RE97_RS08255	SM00923	MbtH-like protein
RE97_RS08290	SM00271	DnaJ molecular chaperone homology domain
RE97_RS08300	SM00322	K homology RNA-binding domain
RE97_RS08380	SM00116	Domain in cystathionine beta-synthase and other proteins.
RE97_RS08380	SM01091	Transporter associated domain
RE97_RS08420	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
RE97_RS08445	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
RE97_RS08455	SM00400	zinc finger
RE97_RS08455	SM00493	RE97_RS08455
RE97_RS08455	SM00766	DNA primase DnaG DnaB-binding
RE97_RS08595	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
RE97_RS08620	SM00347	helix_turn_helix multiple antibiotic resistance protein
RE97_RS08625	SM00382	ATPases associated with a variety of cellular activities
RE97_RS08635	SM00344	helix_turn_helix ASNC type
RE97_RS08735	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
RE97_RS08735	SM00862	Transcriptional regulatory protein, C terminal
RE97_RS08735	SM01043	Bacterial transcriptional activator domain
RE97_RS08740	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
RE97_RS08740	SM00331	Sigma factor PP2C-like phosphatases
RE97_RS08780	SM00387	Histidine kinase-like ATPases
RE97_RS08800	SM00116	Domain in cystathionine beta-synthase and other proteins.
RE97_RS08800	SM00924	MgtE intracellular N domain
RE97_RS08895	SM00450	Rhodanese Homology Domain
RE97_RS08970	SM00220	Serine/Threonine protein kinases, catalytic domain
RE97_RS09015	SM00646	RE97_RS09015
RE97_RS09020	SM01110	RE97_RS09020
RE97_RS09075	SM00849	Metallo-beta-lactamase superfamily
RE97_RS09080	SM00829	Enoylreductase
RE97_RS09100	SM00046	Diacylglycerol kinase catalytic domain (presumed)
RE97_RS09130	SM00825	Beta-ketoacyl synthase
RE97_RS09135	SM00825	Beta-ketoacyl synthase
RE97_RS09145	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
RE97_RS09205	SM00226	Low molecular weight phosphatase family
RE97_RS09230	SM00855	Phosphoglycerate mutase family
RE97_RS09245	SM00530	Helix-turn-helix XRE-family like proteins 
RE97_RS09260	SM00880	RE97_RS09260
RE97_RS09260	SM01118	RE97_RS09260
RE97_RS09300	SM01230	RE97_RS09300
RE97_RS09320	SM01230	RE97_RS09320
RE97_RS09335	SM00729	Elongator protein 3, MiaB family, Radical SAM
RE97_RS09525	SM00563	Phosphate acyltransferases
RE97_RS09555	SM00220	Serine/Threonine protein kinases, catalytic domain
RE97_RS09655	SM00864	Tubulin/FtsZ family, GTPase domain
RE97_RS09655	SM00865	Tubulin/FtsZ family, C-terminal domain
RE97_RS09740	SM00855	Phosphoglycerate mutase family
RE97_RS09765	SM00382	ATPases associated with a variety of cellular activities
RE97_RS09765	SM00421	helix_turn_helix, Lux Regulon
RE97_RS09770	SM00382	ATPases associated with a variety of cellular activities
RE97_RS09770	SM00421	helix_turn_helix, Lux Regulon
RE97_RS09780	SM00923	MbtH-like protein
RE97_RS09800	SM00822	RE97_RS09800
RE97_RS09800	SM00823	Phosphopantetheine attachment site
RE97_RS09800	SM00825	Beta-ketoacyl synthase
RE97_RS09800	SM00826	RE97_RS09800
RE97_RS09800	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
RE97_RS09800	SM00829	Enoylreductase
RE97_RS09825	SM00822	RE97_RS09825
RE97_RS09835	SM01018	B12 binding domain
RE97_RS09935	SM00382	ATPases associated with a variety of cellular activities
RE97_RS09990	SM00487	DEAD-like helicases superfamily
RE97_RS09990	SM00490	helicase superfamily c-terminal domain
RE97_RS09990	SM01142	RE97_RS09990
RE97_RS09995	SM01142	RE97_RS09995
RE97_RS10005	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
RE97_RS10005	SM00475	5'-3' exonuclease
RE97_RS10075	SM00382	ATPases associated with a variety of cellular activities
RE97_RS10080	SM00062	Bacterial periplasmic substrate-binding proteins
RE97_RS10135	SM00825	Beta-ketoacyl synthase
RE97_RS10140	SM00822	RE97_RS10140
RE97_RS10140	SM00823	Phosphopantetheine attachment site
RE97_RS10140	SM00825	Beta-ketoacyl synthase
RE97_RS10140	SM00826	RE97_RS10140
RE97_RS10140	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
RE97_RS10140	SM00829	Enoylreductase
RE97_RS10140	SM01294	RE97_RS10140
RE97_RS10145	SM00822	RE97_RS10145
RE97_RS10145	SM00823	Phosphopantetheine attachment site
RE97_RS10145	SM00826	RE97_RS10145
RE97_RS10145	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
RE97_RS10145	SM00829	Enoylreductase
RE97_RS10145	SM01294	RE97_RS10145
RE97_RS10235	SM00587	ZnF_C4 abd HLH domain containing kinases domain
RE97_RS10300	SM00382	ATPases associated with a variety of cellular activities
RE97_RS10375	SM00822	RE97_RS10375
RE97_RS10430	SM00091	PAS domain
RE97_RS10430	SM00387	Histidine kinase-like ATPases
RE97_RS10475	SM00833	Cobalamin synthesis protein cobW C-terminal domain
RE97_RS10505	SM01060	RE97_RS10505
RE97_RS10555	SM00822	RE97_RS10555
RE97_RS10605	SM00637	RE97_RS10605
RE97_RS10610	SM00342	helix_turn_helix, arabinose operon control protein
RE97_RS10645	SM00981	RE97_RS10645
RE97_RS10655	SM00422	helix_turn_helix, mercury resistance
RE97_RS10665	SM00271	DnaJ molecular chaperone homology domain
RE97_RS10680	SM00822	RE97_RS10680
RE97_RS10730	SM00382	ATPases associated with a variety of cellular activities
RE97_RS10730	SM00487	DEAD-like helicases superfamily
RE97_RS10730	SM00490	helicase superfamily c-terminal domain
RE97_RS10730	SM00847	Helicase associated domain (HA2)  Add an annotation
RE97_RS10735	SM00267	diguanylate cyclase
RE97_RS10750	SM01110	RE97_RS10750
RE97_RS10840	SM01110	RE97_RS10840
RE97_RS10895	SM00342	helix_turn_helix, arabinose operon control protein
RE97_RS10945	SM00849	Metallo-beta-lactamase superfamily
RE97_RS10950	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
RE97_RS11030	SM00852	Probable molybdopterin binding domain
RE97_RS11050	SM00829	Enoylreductase
RE97_RS11090	SM00829	Enoylreductase
RE97_RS11095	SM00867	YceI-like domain 
RE97_RS11110	SM00830	Chorismate mutase type II
RE97_RS11155	SM01230	RE97_RS11155
RE97_RS11215	SM00642	Alpha-amylase domain
RE97_RS11230	SM00382	ATPases associated with a variety of cellular activities
RE97_RS11230	SM00464	Found in ATP-dependent protease La (LON)
RE97_RS11295	SM00829	Enoylreductase
RE97_RS11365	SM01350	RE97_RS11365
RE97_RS11370	SM01240	RE97_RS11370
RE97_RS11390	SM01006	Siderophore biosynthesis protein domain
RE97_RS11395	SM00116	Domain in cystathionine beta-synthase and other proteins.
RE97_RS11395	SM01091	Transporter associated domain
RE97_RS11430	SM00422	helix_turn_helix, mercury resistance
RE97_RS11440	SM00422	helix_turn_helix, mercury resistance
RE97_RS11445	SM00240	Forkhead associated domain
RE97_RS11475	SM00957	SecA DEAD-like domain
RE97_RS11475	SM00958	SecA preprotein cross-linking domain
RE97_RS11485	SM00382	ATPases associated with a variety of cellular activities
RE97_RS11580	SM00382	ATPases associated with a variety of cellular activities
RE97_RS11640	SM00382	ATPases associated with a variety of cellular activities
RE97_RS11690	SM01012	RE97_RS11690
RE97_RS11710	SM00861	Transketolase, pyrimidine binding domain
RE97_RS11750	SM00487	DEAD-like helicases superfamily
RE97_RS11750	SM00490	helicase superfamily c-terminal domain
RE97_RS11775	SM01110	RE97_RS11775
RE97_RS11875	SM00240	Forkhead associated domain
RE97_RS11875	SM00382	ATPases associated with a variety of cellular activities
RE97_RS11935	SM00346	helix_turn_helix isocitrate lyase regulation
RE97_RS11950	SM00886	Stress responsive A/B Barrel Domain
RE97_RS11955	SM00822	RE97_RS11955
RE97_RS12045	SM00903	Flavin reductase like domain
RE97_RS12075	SM00823	Phosphopantetheine attachment site
RE97_RS12075	SM01294	RE97_RS12075
RE97_RS12080	SM00923	MbtH-like protein
RE97_RS12105	SM00382	ATPases associated with a variety of cellular activities
RE97_RS12115	SM00363	S4 RNA-binding domain
RE97_RS12175	SM00363	S4 RNA-binding domain
RE97_RS12200	SM00363	S4 RNA-binding domain
RE97_RS12215	SM00382	ATPases associated with a variety of cellular activities
RE97_RS12270	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
RE97_RS12310	SM00382	ATPases associated with a variety of cellular activities
RE97_RS12325	SM00823	Phosphopantetheine attachment site
RE97_RS12325	SM00825	Beta-ketoacyl synthase
RE97_RS12325	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
RE97_RS12325	SM01294	RE97_RS12325
RE97_RS12330	SM00822	RE97_RS12330
RE97_RS12330	SM00823	Phosphopantetheine attachment site
RE97_RS12330	SM00825	Beta-ketoacyl synthase
RE97_RS12330	SM00826	RE97_RS12330
RE97_RS12330	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
RE97_RS12330	SM00829	Enoylreductase
RE97_RS12330	SM01294	RE97_RS12330
RE97_RS12375	SM00859	Semialdehyde dehydrogenase, NAD binding domain
RE97_RS12380	SM00873	B3/4 domain
RE97_RS12380	SM00874	tRNA synthetase B5 domain
RE97_RS12380	SM00896	Ferredoxin-fold anticodon binding domain
RE97_RS12395	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
RE97_RS12405	SM00967	RNA 2'-O ribose methyltransferase substrate binding
RE97_RS12480	SM00849	Metallo-beta-lactamase superfamily
RE97_RS12505	SM00487	DEAD-like helicases superfamily
RE97_RS12505	SM00490	helicase superfamily c-terminal domain
RE97_RS12535	SM00240	Forkhead associated domain
RE97_RS12535	SM00382	ATPases associated with a variety of cellular activities
RE97_RS12550	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
RE97_RS12550	SM01232	RE97_RS12550
RE97_RS12565	SM00316	Ribosomal protein S1-like RNA-binding domain
RE97_RS12580	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
RE97_RS12580	SM00474	3'-5' exonuclease
RE97_RS12580	SM00475	5'-3' exonuclease
RE97_RS12580	SM00482	DNA polymerase A domain
RE97_RS12595	SM00448	cheY-homologous receiver domain
RE97_RS12595	SM01012	RE97_RS12595
RE97_RS12605	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
RE97_RS12625	SM00382	ATPases associated with a variety of cellular activities
RE97_RS12630	SM00382	ATPases associated with a variety of cellular activities
RE97_RS12780	SM00729	Elongator protein 3, MiaB family, Radical SAM
RE97_RS12780	SM00876	Biotin and Thiamin Synthesis associated domain
RE97_RS12805	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
RE97_RS12805	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RE97_RS12850	SM00642	Alpha-amylase domain
RE97_RS12855	SM00642	Alpha-amylase domain
RE97_RS12860	SM00642	Alpha-amylase domain
RE97_RS12895	SM00563	Phosphate acyltransferases
RE97_RS12905	SM00422	helix_turn_helix, mercury resistance
RE97_RS12915	SM00481	DNA polymerase alpha chain like domain
RE97_RS12945	SM00363	S4 RNA-binding domain
RE97_RS12955	SM00870	RE97_RS12955
RE97_RS12995	SM00923	MbtH-like protein
RE97_RS13015	SM00382	ATPases associated with a variety of cellular activities
RE97_RS13085	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RE97_RS13085	SM00387	Histidine kinase-like ATPases
RE97_RS13085	SM00388	His Kinase A (phosphoacceptor) domain
RE97_RS13090	SM00448	cheY-homologous receiver domain
RE97_RS13090	SM00862	Transcriptional regulatory protein, C terminal
RE97_RS13120	SM00244	prohibitin homologues
RE97_RS13145	SM00822	RE97_RS13145
RE97_RS13155	SM00327	von Willebrand factor (vWF) type A domain
RE97_RS13200	SM00382	ATPases associated with a variety of cellular activities
RE97_RS13250	SM00382	ATPases associated with a variety of cellular activities
RE97_RS13275	SM00382	ATPases associated with a variety of cellular activities
RE97_RS13295	SM00829	Enoylreductase
RE97_RS13305	SM00861	Transketolase, pyrimidine binding domain
RE97_RS13375	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
RE97_RS13395	SM00563	Phosphate acyltransferases
RE97_RS13455	SM00278	Helix-hairpin-helix DNA-binding motif class 1
RE97_RS13455	SM00465	GIY-YIG type nucleases (URI domain)
RE97_RS13530	SM00347	helix_turn_helix multiple antibiotic resistance protein
RE97_RS13565	SM01409	RE97_RS13565
RE97_RS13570	SM00072	Guanylate kinase homologues.
RE97_RS13585	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
RE97_RS13590	SM00851	MGS-like domain
RE97_RS13590	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
RE97_RS13595	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
RE97_RS13635	SM00382	ATPases associated with a variety of cellular activities
RE97_RS13655	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RE97_RS13655	SM00866	RE97_RS13655
RE97_RS13670	SM00448	cheY-homologous receiver domain
RE97_RS13670	SM00862	Transcriptional regulatory protein, C terminal
RE97_RS13675	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RE97_RS13675	SM00387	Histidine kinase-like ATPases
RE97_RS13675	SM00388	His Kinase A (phosphoacceptor) domain
RE97_RS13700	SM00841	Elongation factor P, C-terminal
RE97_RS13700	SM01185	RE97_RS13700
RE97_RS13735	SM00382	ATPases associated with a variety of cellular activities
RE97_RS13790	SM00732	Likely ribonuclease with RNase H fold.
RE97_RS13795	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
RE97_RS13815	SM00382	ATPases associated with a variety of cellular activities
RE97_RS13835	SM00460	Transglutaminase/protease-like homologues
RE97_RS13890	SM01130	RE97_RS13890
RE97_RS13895	SM01007	Class II Aldolase and Adducin N-terminal domain
RE97_RS13900	SM00530	Helix-turn-helix XRE-family like proteins 
RE97_RS13915	SM00729	Elongator protein 3, MiaB family, Radical SAM
RE97_RS13925	SM00507	HNH nucleases
RE97_RS13935	SM00849	Metallo-beta-lactamase superfamily
RE97_RS13945	SM00220	Serine/Threonine protein kinases, catalytic domain
RE97_RS13950	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
RE97_RS13950	SM00954	Region found in RelA / SpoT proteins
RE97_RS13975	SM01323	RE97_RS13975
RE97_RS13985	SM00823	Phosphopantetheine attachment site
RE97_RS13995	SM00382	ATPases associated with a variety of cellular activities
RE97_RS14070	SM00116	Domain in cystathionine beta-synthase and other proteins.
RE97_RS14110	SM00450	Rhodanese Homology Domain
RE97_RS14200	SM00448	cheY-homologous receiver domain
RE97_RS14200	SM00862	Transcriptional regulatory protein, C terminal
RE97_RS14205	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RE97_RS14205	SM00387	Histidine kinase-like ATPases
RE97_RS14205	SM00388	His Kinase A (phosphoacceptor) domain
RE97_RS14235	SM00387	Histidine kinase-like ATPases
RE97_RS14235	SM00388	His Kinase A (phosphoacceptor) domain
RE97_RS14240	SM00448	cheY-homologous receiver domain
RE97_RS14240	SM00862	Transcriptional regulatory protein, C terminal
RE97_RS14265	SM01192	RE97_RS14265
RE97_RS14265	SM01193	RE97_RS14265
RE97_RS14280	SM00487	DEAD-like helicases superfamily
RE97_RS14280	SM00490	helicase superfamily c-terminal domain
RE97_RS14280	SM00982	RE97_RS14280
RE97_RS14280	SM01058	CarD-like/TRCF domain
RE97_RS14305	SM01400	RE97_RS14305
RE97_RS14345	SM00650	Ribosomal RNA adenine dimethylases
RE97_RS14350	SM01208	RE97_RS14350
RE97_RS14365	SM00091	PAS domain
RE97_RS14480	SM00052	Putative diguanylate phosphodiesterase
RE97_RS14480	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
RE97_RS14480	SM00267	diguanylate cyclase
RE97_RS14535	SM00100	Cyclic nucleotide-monophosphate binding domain
RE97_RS14600	SM00852	Probable molybdopterin binding domain
RE97_RS14615	SM00834	Putative regulatory protein
RE97_RS14620	SM00858	RE97_RS14620
RE97_RS14630	SM00852	Probable molybdopterin binding domain
RE97_RS14635	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
RE97_RS14640	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RE97_RS14640	SM00387	Histidine kinase-like ATPases
RE97_RS14640	SM00388	His Kinase A (phosphoacceptor) domain
RE97_RS14645	SM00448	cheY-homologous receiver domain
RE97_RS14645	SM00862	Transcriptional regulatory protein, C terminal
RE97_RS14670	SM00878	Biotin carboxylase C-terminal domain
RE97_RS14695	SM00327	von Willebrand factor (vWF) type A domain
RE97_RS14710	SM00798	AICARFT/IMPCHase bienzyme
RE97_RS14710	SM00851	MGS-like domain
RE97_RS14740	SM00881	CoA binding domain
RE97_RS14765	SM00830	Chorismate mutase type II
RE97_RS14780	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
RE97_RS14780	SM01232	RE97_RS14780
RE97_RS14820	SM00849	Metallo-beta-lactamase superfamily
RE97_RS14850	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
RE97_RS15060	SM00448	cheY-homologous receiver domain
RE97_RS15060	SM00862	Transcriptional regulatory protein, C terminal
RE97_RS15065	SM00387	Histidine kinase-like ATPases
RE97_RS15065	SM00388	His Kinase A (phosphoacceptor) domain
RE97_RS15130	SM00347	helix_turn_helix multiple antibiotic resistance protein
RE97_RS15175	SM00357	Cold shock protein domain
RE97_RS15205	SM00852	Probable molybdopterin binding domain
RE97_RS15225	SM00487	DEAD-like helicases superfamily
RE97_RS15225	SM00490	helicase superfamily c-terminal domain
RE97_RS15450	SM00822	RE97_RS15450
RE97_RS15535	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
RE97_RS15680	SM00822	RE97_RS15680
RE97_RS15775	SM00346	helix_turn_helix isocitrate lyase regulation
RE97_RS15790	SM00421	helix_turn_helix, Lux Regulon
RE97_RS15790	SM00448	cheY-homologous receiver domain
RE97_RS15800	SM00382	ATPases associated with a variety of cellular activities
RE97_RS15885	SM00357	Cold shock protein domain
RE97_RS15950	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
RE97_RS15990	SM00382	ATPases associated with a variety of cellular activities
RE97_RS16015	SM00862	Transcriptional regulatory protein, C terminal
RE97_RS16035	SM00450	Rhodanese Homology Domain
RE97_RS16125	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RE97_RS16125	SM00866	RE97_RS16125
RE97_RS16135	SM01211	RE97_RS16135
RE97_RS16150	SM00849	Metallo-beta-lactamase superfamily
RE97_RS16205	SM00998	Adenylosuccinate lyase C-terminus
RE97_RS16230	SM01209	RE97_RS16230
RE97_RS16230	SM01210	RE97_RS16230
RE97_RS16285	SM00829	Enoylreductase
RE97_RS16300	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RE97_RS16300	SM00387	Histidine kinase-like ATPases
RE97_RS16300	SM00388	His Kinase A (phosphoacceptor) domain
RE97_RS16305	SM00448	cheY-homologous receiver domain
RE97_RS16305	SM00862	Transcriptional regulatory protein, C terminal
RE97_RS16375	SM00822	RE97_RS16375
RE97_RS16380	SM00822	RE97_RS16380
RE97_RS16395	SM00382	ATPases associated with a variety of cellular activities
RE97_RS16600	SM00859	Semialdehyde dehydrogenase, NAD binding domain
RE97_RS16670	SM00822	RE97_RS16670
RE97_RS16685	SM00882	Coenzyme A transferase
RE97_RS16690	SM00882	Coenzyme A transferase
RE97_RS16760	SM00903	Flavin reductase like domain
RE97_RS16810	SM00354	helix_turn _helix lactose operon repressor
RE97_RS16820	SM00382	ATPases associated with a variety of cellular activities
RE97_RS16835	SM00849	Metallo-beta-lactamase superfamily
RE97_RS16860	SM00967	RNA 2'-O ribose methyltransferase substrate binding
RE97_RS16865	SM00840	RE97_RS16865
RE97_RS16880	SM01058	CarD-like/TRCF domain
RE97_RS16890	SM00382	ATPases associated with a variety of cellular activities
RE97_RS16905	SM00947	Carbonic anhydrase
RE97_RS16910	SM00478	endonuclease III
RE97_RS16935	SM00855	Phosphoglycerate mutase family
RE97_RS16950	SM00382	ATPases associated with a variety of cellular activities
RE97_RS16950	SM01086	C-terminal, D2-small domain, of ClpB protein
RE97_RS17000	SM00905	Dihydroneopterin aldolase
RE97_RS17015	SM00382	ATPases associated with a variety of cellular activities
RE97_RS17145	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
RE97_RS17145	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RE97_RS17150	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
RE97_RS17150	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
RE97_RS17150	SM00493	RE97_RS17150
RE97_RS17160	SM00357	Cold shock protein domain
RE97_RS17165	SM00487	DEAD-like helicases superfamily
RE97_RS17165	SM00490	helicase superfamily c-terminal domain
RE97_RS17220	SM00382	ATPases associated with a variety of cellular activities
RE97_RS17280	SM00478	endonuclease III
RE97_RS17280	SM00525	RE97_RS17280
RE97_RS17290	SM00100	Cyclic nucleotide-monophosphate binding domain
RE97_RS17290	SM00419	helix_turn_helix, cAMP Regulatory protein
RE97_RS17295	SM00849	Metallo-beta-lactamase superfamily
RE97_RS17320	SM00740	RE97_RS17320
RE97_RS17355	SM01012	RE97_RS17355
RE97_RS17400	SM00387	Histidine kinase-like ATPases
RE97_RS17410	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
RE97_RS17410	SM00331	Sigma factor PP2C-like phosphatases
RE97_RS17450	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
RE97_RS17495	SM00382	ATPases associated with a variety of cellular activities
RE97_RS17625	SM01110	RE97_RS17625
RE97_RS17685	SM00382	ATPases associated with a variety of cellular activities
RE97_RS17690	SM00828	Methyltransferase  in polyketide synthase (PKS) enzymes.
RE97_RS17705	SM00646	RE97_RS17705
RE97_RS17715	SM00278	Helix-hairpin-helix DNA-binding motif class 1
RE97_RS17715	SM00493	RE97_RS17715
RE97_RS17730	SM00479	RE97_RS17730
RE97_RS17735	SM00917	LeuA allosteric (dimerisation) domain
RE97_RS17745	SM00859	Semialdehyde dehydrogenase, NAD binding domain
RE97_RS17815	SM00530	Helix-turn-helix XRE-family like proteins 
RE97_RS17835	SM00878	Biotin carboxylase C-terminal domain
RE97_RS17860	SM00849	Metallo-beta-lactamase superfamily
RE97_RS17955	SM00855	Phosphoglycerate mutase family
RE97_RS17985	SM00829	Enoylreductase
RE97_RS17990	SM00849	Metallo-beta-lactamase superfamily
RE97_RS18000	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RE97_RS18000	SM00387	Histidine kinase-like ATPases
RE97_RS18000	SM00388	His Kinase A (phosphoacceptor) domain
RE97_RS18005	SM00448	cheY-homologous receiver domain
RE97_RS18005	SM00862	Transcriptional regulatory protein, C terminal
RE97_RS18085	SM00829	Enoylreductase
RE97_RS18105	SM00382	ATPases associated with a variety of cellular activities
RE97_RS18165	SM00240	Forkhead associated domain
RE97_RS18165	SM00862	Transcriptional regulatory protein, C terminal
RE97_RS18165	SM01043	Bacterial transcriptional activator domain
RE97_RS18190	SM00344	helix_turn_helix ASNC type
RE97_RS18200	SM00342	helix_turn_helix, arabinose operon control protein
RE97_RS18215	SM00823	Phosphopantetheine attachment site
RE97_RS18215	SM00825	Beta-ketoacyl synthase
RE97_RS18215	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
RE97_RS18225	SM01110	RE97_RS18225
RE97_RS18250	SM00014	Acid phosphatase homologues
RE97_RS18270	SM00644	RE97_RS18270
RE97_RS18270	SM00701	Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme.
RE97_RS18280	SM00563	Phosphate acyltransferases
RE97_RS18285	SM00563	Phosphate acyltransferases
RE97_RS18290	SM00563	Phosphate acyltransferases
RE97_RS18325	SM00342	helix_turn_helix, arabinose operon control protein
RE97_RS18350	SM00855	Phosphoglycerate mutase family
RE97_RS18435	SM00481	DNA polymerase alpha chain like domain
RE97_RS18480	SM00382	ATPases associated with a variety of cellular activities
RE97_RS18550	SM00387	Histidine kinase-like ATPases
RE97_RS18550	SM00388	His Kinase A (phosphoacceptor) domain
RE97_RS18585	SM00062	Bacterial periplasmic substrate-binding proteins
RE97_RS18590	SM00382	ATPases associated with a variety of cellular activities
RE97_RS18895	SM00100	Cyclic nucleotide-monophosphate binding domain
RE97_RS18895	SM00419	helix_turn_helix, cAMP Regulatory protein
RE97_RS18910	SM00822	RE97_RS18910
RE97_RS18950	SM00306	Hint (Hedgehog/Intein) domain N-terminal region
RE97_RS19040	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RE97_RS19045	SM00062	Bacterial periplasmic substrate-binding proteins
RE97_RS19050	SM00382	ATPases associated with a variety of cellular activities
RE97_RS19055	SM00347	helix_turn_helix multiple antibiotic resistance protein
RE97_RS19130	SM00530	Helix-turn-helix XRE-family like proteins 
RE97_RS19200	SM00240	Forkhead associated domain
RE97_RS19205	SM00240	Forkhead associated domain
RE97_RS19210	SM00331	Sigma factor PP2C-like phosphatases
RE97_RS19210	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
RE97_RS19225	SM00220	Serine/Threonine protein kinases, catalytic domain
RE97_RS19230	SM00220	Serine/Threonine protein kinases, catalytic domain
RE97_RS19230	SM00740	RE97_RS19230
RE97_RS19300	SM00822	RE97_RS19300
RE97_RS19300	SM00823	Phosphopantetheine attachment site
RE97_RS19300	SM00825	Beta-ketoacyl synthase
RE97_RS19300	SM00826	RE97_RS19300
RE97_RS19300	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
RE97_RS19300	SM00829	Enoylreductase
RE97_RS19335	SM00833	Cobalamin synthesis protein cobW C-terminal domain
RE97_RS19345	SM01012	RE97_RS19345
RE97_RS19350	SM00833	Cobalamin synthesis protein cobW C-terminal domain
RE97_RS19365	SM00382	ATPases associated with a variety of cellular activities
RE97_RS19380	SM00382	ATPases associated with a variety of cellular activities
RE97_RS19390	SM00382	ATPases associated with a variety of cellular activities
RE97_RS19470	SM00014	Acid phosphatase homologues
RE97_RS19520	SM00829	Enoylreductase
RE97_RS19640	SM00984	UDP binding domain
RE97_RS19705	SM00953	RE97_RS19705
RE97_RS19725	SM00271	DnaJ molecular chaperone homology domain
RE97_RS19730	SM00422	helix_turn_helix, mercury resistance
RE97_RS19735	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
RE97_RS19735	SM00382	ATPases associated with a variety of cellular activities
RE97_RS19790	SM00382	ATPases associated with a variety of cellular activities
RE97_RS19790	SM01086	C-terminal, D2-small domain, of ClpB protein
RE97_RS19825	SM00882	Coenzyme A transferase
RE97_RS19860	SM00855	Phosphoglycerate mutase family
RE97_RS19865	SM00788	Adenylosuccinate synthetase
RE97_RS19880	SM00450	Rhodanese Homology Domain
RE97_RS19935	SM00849	Metallo-beta-lactamase superfamily
RE97_RS19985	SM00220	Serine/Threonine protein kinases, catalytic domain
RE97_RS19990	SM00062	Bacterial periplasmic substrate-binding proteins
RE97_RS20070	SM00347	helix_turn_helix multiple antibiotic resistance protein
RE97_RS20140	SM00464	Found in ATP-dependent protease La (LON)
RE97_RS20165	SM00382	ATPases associated with a variety of cellular activities
RE97_RS20165	SM01072	Cell division protein 48 (CDC48) domain 2
RE97_RS20165	SM01073	Cell division protein 48 (CDC48) N-terminal domain
RE97_RS20185	SM00852	Probable molybdopterin binding domain
RE97_RS20320	SM00530	Helix-turn-helix XRE-family like proteins 
RE97_RS20360	SM00530	Helix-turn-helix XRE-family like proteins 
RE97_RS20380	SM01133	RE97_RS20380
RE97_RS20430	SM00855	Phosphoglycerate mutase family
RE97_RS20435	SM00387	Histidine kinase-like ATPases
RE97_RS20435	SM00388	His Kinase A (phosphoacceptor) domain
RE97_RS20440	SM00448	cheY-homologous receiver domain
RE97_RS20440	SM00862	Transcriptional regulatory protein, C terminal
RE97_RS20475	SM00046	Diacylglycerol kinase catalytic domain (presumed)
RE97_RS20495	SM00563	Phosphate acyltransferases
RE97_RS20555	SM01004	Delta-aminolevulinic acid dehydratase
RE97_RS20615	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
RE97_RS20635	SM00855	Phosphoglycerate mutase family
RE97_RS20775	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
RE97_RS20825	SM00530	Helix-turn-helix XRE-family like proteins 
RE97_RS20910	SM01012	RE97_RS20910
RE97_RS20955	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RE97_RS20955	SM00895	RE97_RS20955
RE97_RS21005	SM00382	ATPases associated with a variety of cellular activities
RE97_RS21035	SM01116	RE97_RS21035
RE97_RS21065	SM00849	Metallo-beta-lactamase superfamily
RE97_RS21115	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
RE97_RS21115	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
RE97_RS21120	SM00649	Ribosomal protein L11/L12
RE97_RS21205	SM00382	ATPases associated with a variety of cellular activities
RE97_RS21215	SM00663	RNA polymerase I subunit A N-terminus
RE97_RS21220	SM00518	AP endonuclease family 2
RE97_RS21270	SM00838	Elongation factor G C-terminus
RE97_RS21270	SM00889	Elongation factor G, domain IV
RE97_RS21290	SM00822	RE97_RS21290
RE97_RS21330	SM00729	Elongator protein 3, MiaB family, Radical SAM
RE97_RS21360	SM01403	RE97_RS21360
RE97_RS21380	SM01382	RE97_RS21380
RE97_RS21380	SM01383	RE97_RS21380
RE97_RS21395	SM00322	K homology RNA-binding domain
RE97_RS21440	SM00507	HNH nucleases
RE97_RS21445	SM01374	RE97_RS21445
RE97_RS21450	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
RE97_RS21525	SM01007	Class II Aldolase and Adducin N-terminal domain
RE97_RS21595	SM00382	ATPases associated with a variety of cellular activities
RE97_RS21620	SM00347	helix_turn_helix multiple antibiotic resistance protein
RE97_RS21720	SM00363	S4 RNA-binding domain
RE97_RS21720	SM01390	RE97_RS21720
RE97_RS21725	SM00662	RNA polymerases D
RE97_RS21740	SM01110	RE97_RS21740
RE97_RS21745	SM01110	RE97_RS21745
RE97_RS21765	SM00382	ATPases associated with a variety of cellular activities
RE97_RS21850	SM01005	Alanine racemase, C-terminal domain
RE97_RS21880	SM00883	Chaperonin 10 Kd subunit
RE97_RS21890	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
RE97_RS21890	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RE97_RS21895	SM00530	Helix-turn-helix XRE-family like proteins 
RE97_RS21945	SM00116	Domain in cystathionine beta-synthase and other proteins.
RE97_RS21945	SM01240	RE97_RS21945
RE97_RS21950	SM01240	RE97_RS21950
RE97_RS21990	SM00347	helix_turn_helix multiple antibiotic resistance protein
RE97_RS22060	SM00354	helix_turn _helix lactose operon repressor
RE97_RS22130	SM00587	ZnF_C4 abd HLH domain containing kinases domain
RE97_RS22150	SM00421	helix_turn_helix, Lux Regulon
RE97_RS22150	SM00448	cheY-homologous receiver domain
RE97_RS22215	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
RE97_RS22275	SM00646	RE97_RS22275
RE97_RS22285	SM00470	ParB-like nuclease domain
RE97_RS22300	SM00393	Putative single-stranded nucleic acids-binding domain
