MSG_RS00005	SM00382	ATPases associated with a variety of cellular activities
MSG_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
MSG_RS00010	SM00480	DNA polymerase III beta subunit
MSG_RS00025	SM00387	Histidine kinase-like ATPases
MSG_RS00025	SM00433	TopoisomeraseII
MSG_RS00030	SM00434	DNA Topoisomerase IV
MSG_RS00055	SM00824	Thioesterase
MSG_RS00100	SM00220	Serine/Threonine protein kinases, catalytic domain
MSG_RS00100	SM00740	MSG_RS00100
MSG_RS00120	SM00331	Sigma factor PP2C-like phosphatases
MSG_RS00120	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
MSG_RS00125	SM00240	Forkhead associated domain
MSG_RS00130	SM00240	Forkhead associated domain
MSG_RS00185	SM00530	Helix-turn-helix XRE-family like proteins 
MSG_RS00280	SM00822	MSG_RS00280
MSG_RS00285	SM00347	helix_turn_helix multiple antibiotic resistance protein
MSG_RS00290	SM00382	ATPases associated with a variety of cellular activities
MSG_RS00295	SM00062	Bacterial periplasmic substrate-binding proteins
MSG_RS00300	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MSG_RS00395	SM00382	ATPases associated with a variety of cellular activities
MSG_RS00415	SM00530	Helix-turn-helix XRE-family like proteins 
MSG_RS00465	SM00267	diguanylate cyclase
MSG_RS00475	SM00331	Sigma factor PP2C-like phosphatases
MSG_RS00475	SM00387	Histidine kinase-like ATPases
MSG_RS00475	SM00388	His Kinase A (phosphoacceptor) domain
MSG_RS00475	SM00448	cheY-homologous receiver domain
MSG_RS00495	SM00346	helix_turn_helix isocitrate lyase regulation
MSG_RS00600	SM01060	MSG_RS00600
MSG_RS00620	SM00382	ATPases associated with a variety of cellular activities
MSG_RS00625	SM00062	Bacterial periplasmic substrate-binding proteins
MSG_RS00705	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
MSG_RS00745	SM00387	Histidine kinase-like ATPases
MSG_RS00745	SM00388	His Kinase A (phosphoacceptor) domain
MSG_RS00830	SM00354	helix_turn _helix lactose operon repressor
MSG_RS01065	SM00833	Cobalamin synthesis protein cobW C-terminal domain
MSG_RS01100	SM00829	Enoylreductase
MSG_RS01115	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MSG_RS01115	SM00866	MSG_RS01115
MSG_RS01140	SM00822	MSG_RS01140
MSG_RS01180	SM00829	Enoylreductase
MSG_RS01225	SM00838	Elongation factor G C-terminus
MSG_RS01225	SM00889	Elongation factor G, domain IV
MSG_RS01235	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
MSG_RS01240	SM00642	Alpha-amylase domain
MSG_RS01270	SM00382	ATPases associated with a variety of cellular activities
MSG_RS01275	SM00347	helix_turn_helix multiple antibiotic resistance protein
MSG_RS01370	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MSG_RS01370	SM00895	MSG_RS01370
MSG_RS01380	SM00825	Beta-ketoacyl synthase
MSG_RS01380	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
MSG_RS01525	SM00822	MSG_RS01525
MSG_RS01545	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
MSG_RS01545	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
MSG_RS01590	SM00347	helix_turn_helix multiple antibiotic resistance protein
MSG_RS01690	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
MSG_RS01705	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MSG_RS01705	SM00895	MSG_RS01705
MSG_RS01840	SM01217	MSG_RS01840
MSG_RS01880	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
MSG_RS02170	SM00822	MSG_RS02170
MSG_RS02190	SM00903	Flavin reductase like domain
MSG_RS02250	SM00862	Transcriptional regulatory protein, C terminal
MSG_RS02270	SM00797	Allophanate hydrolase subunit 2
MSG_RS02275	SM00796	Allophanate hydrolase subunit 1
MSG_RS02360	SM00382	ATPases associated with a variety of cellular activities
MSG_RS02370	SM00382	ATPases associated with a variety of cellular activities
MSG_RS02455	SM00014	Acid phosphatase homologues
MSG_RS02495	SM00829	Enoylreductase
MSG_RS02505	SM00347	helix_turn_helix multiple antibiotic resistance protein
MSG_RS02550	SM00014	Acid phosphatase homologues
MSG_RS02550	SM00046	Diacylglycerol kinase catalytic domain (presumed)
MSG_RS02570	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
MSG_RS02600	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
MSG_RS02630	SM00984	UDP binding domain
MSG_RS02665	SM00421	helix_turn_helix, Lux Regulon
MSG_RS02745	SM00271	DnaJ molecular chaperone homology domain
MSG_RS02750	SM00422	helix_turn_helix, mercury resistance
MSG_RS02765	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
MSG_RS02780	SM00382	ATPases associated with a variety of cellular activities
MSG_RS02780	SM01086	C-terminal, D2-small domain, of ClpB protein
MSG_RS02865	SM00788	Adenylosuccinate synthetase
MSG_RS02880	SM00450	Rhodanese Homology Domain
MSG_RS02960	SM00849	Metallo-beta-lactamase superfamily
MSG_RS02995	SM00220	Serine/Threonine protein kinases, catalytic domain
MSG_RS03000	SM00062	Bacterial periplasmic substrate-binding proteins
MSG_RS03080	SM00347	helix_turn_helix multiple antibiotic resistance protein
MSG_RS03150	SM00464	Found in ATP-dependent protease La (LON)
MSG_RS03175	SM00382	ATPases associated with a variety of cellular activities
MSG_RS03175	SM01073	Cell division protein 48 (CDC48) N-terminal domain
MSG_RS03190	SM00852	Probable molybdopterin binding domain
MSG_RS03355	SM00530	Helix-turn-helix XRE-family like proteins 
MSG_RS03395	SM00530	Helix-turn-helix XRE-family like proteins 
MSG_RS03415	SM01133	MSG_RS03415
MSG_RS03465	SM00855	Phosphoglycerate mutase family
MSG_RS03470	SM00387	Histidine kinase-like ATPases
MSG_RS03470	SM00388	His Kinase A (phosphoacceptor) domain
MSG_RS03475	SM00448	cheY-homologous receiver domain
MSG_RS03475	SM00862	Transcriptional regulatory protein, C terminal
MSG_RS03515	SM00046	Diacylglycerol kinase catalytic domain (presumed)
MSG_RS03530	SM01155	MSG_RS03530
MSG_RS03540	SM00563	Phosphate acyltransferases
MSG_RS03605	SM01004	Delta-aminolevulinic acid dehydratase
MSG_RS03635	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
MSG_RS03635	SM00421	helix_turn_helix, Lux Regulon
MSG_RS03680	SM00855	Phosphoglycerate mutase family
MSG_RS03835	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
MSG_RS03925	SM00953	MSG_RS03925
MSG_RS03975	SM00382	ATPases associated with a variety of cellular activities
MSG_RS04055	SM00849	Metallo-beta-lactamase superfamily
MSG_RS04105	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
MSG_RS04110	SM00649	Ribosomal protein L11/L12
MSG_RS04165	SM00872	Alpha mannosidase, middle domain
MSG_RS04200	SM00382	ATPases associated with a variety of cellular activities
MSG_RS04210	SM00663	RNA polymerase I subunit A N-terminus
MSG_RS04230	SM00344	helix_turn_helix ASNC type
MSG_RS04240	SM00518	AP endonuclease family 2
MSG_RS04290	SM00838	Elongation factor G C-terminus
MSG_RS04290	SM00889	Elongation factor G, domain IV
MSG_RS04345	SM00729	Elongator protein 3, MiaB family, Radical SAM
MSG_RS04385	SM00923	MbtH-like protein
MSG_RS04445	SM00530	Helix-turn-helix XRE-family like proteins 
MSG_RS04455	SM01403	MSG_RS04455
MSG_RS04475	SM01382	MSG_RS04475
MSG_RS04475	SM01383	MSG_RS04475
MSG_RS04490	SM00322	K homology RNA-binding domain
MSG_RS04555	SM01374	MSG_RS04555
MSG_RS04560	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
MSG_RS04655	SM00849	Metallo-beta-lactamase superfamily
MSG_RS04660	SM01007	Class II Aldolase and Adducin N-terminal domain
MSG_RS04720	SM00347	helix_turn_helix multiple antibiotic resistance protein
MSG_RS04810	SM00387	Histidine kinase-like ATPases
MSG_RS04815	SM00448	cheY-homologous receiver domain
MSG_RS04840	SM00363	S4 RNA-binding domain
MSG_RS04840	SM01390	MSG_RS04840
MSG_RS04845	SM00662	RNA polymerases D
MSG_RS04860	SM01110	MSG_RS04860
MSG_RS04865	SM01110	MSG_RS04865
MSG_RS04885	SM00382	ATPases associated with a variety of cellular activities
MSG_RS04985	SM01005	Alanine racemase, C-terminal domain
MSG_RS05030	SM00883	Chaperonin 10 Kd subunit
MSG_RS05065	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
MSG_RS05065	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MSG_RS05115	SM00116	Domain in cystathionine beta-synthase and other proteins.
MSG_RS05115	SM01240	MSG_RS05115
MSG_RS05120	SM01240	MSG_RS05120
MSG_RS05185	SM00825	Beta-ketoacyl synthase
MSG_RS05200	SM00822	MSG_RS05200
MSG_RS05205	SM00855	Phosphoglycerate mutase family
MSG_RS05225	SM00481	DNA polymerase alpha chain like domain
MSG_RS05255	SM00155	Phospholipase D. Active site motifs.
MSG_RS05265	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MSG_RS05265	SM00387	Histidine kinase-like ATPases
MSG_RS05270	SM00960	Roadblock/LC7 domain
MSG_RS05290	SM00240	Forkhead associated domain
MSG_RS05290	SM00382	ATPases associated with a variety of cellular activities
MSG_RS05295	SM00240	Forkhead associated domain
MSG_RS05295	SM00382	ATPases associated with a variety of cellular activities
MSG_RS05380	SM01329	MSG_RS05380
MSG_RS05460	SM00220	Serine/Threonine protein kinases, catalytic domain
MSG_RS05490	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
MSG_RS05520	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MSG_RS05520	SM00895	MSG_RS05520
MSG_RS05530	SM00327	von Willebrand factor (vWF) type A domain
MSG_RS05535	SM00327	von Willebrand factor (vWF) type A domain
MSG_RS05565	SM01110	MSG_RS05565
MSG_RS05605	SM00116	Domain in cystathionine beta-synthase and other proteins.
MSG_RS05625	SM00831	Cation transporter/ATPase, N-terminus
MSG_RS05640	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
MSG_RS05640	SM01232	MSG_RS05640
MSG_RS05645	SM00382	ATPases associated with a variety of cellular activities
MSG_RS05645	SM00487	DEAD-like helicases superfamily
MSG_RS05645	SM00490	helicase superfamily c-terminal domain
MSG_RS05675	SM00878	Biotin carboxylase C-terminal domain
MSG_RS05685	SM00450	Rhodanese Homology Domain
MSG_RS05730	SM01001	AIR carboxylase
MSG_RS05740	SM00331	Sigma factor PP2C-like phosphatases
MSG_RS05740	SM00448	cheY-homologous receiver domain
MSG_RS05745	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MSG_RS05745	SM00387	Histidine kinase-like ATPases
MSG_RS05745	SM00388	His Kinase A (phosphoacceptor) domain
MSG_RS05750	SM00448	cheY-homologous receiver domain
MSG_RS05785	SM00507	HNH nucleases
MSG_RS05895	SM00996	S-adenosyl-L-homocysteine hydrolase
MSG_RS05895	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
MSG_RS05905	SM00448	cheY-homologous receiver domain
MSG_RS05905	SM00862	Transcriptional regulatory protein, C terminal
MSG_RS05910	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MSG_RS05910	SM00387	Histidine kinase-like ATPases
MSG_RS05910	SM00388	His Kinase A (phosphoacceptor) domain
MSG_RS05915	SM00909	Sporulation and spore germination
MSG_RS05930	SM00957	SecA DEAD-like domain
MSG_RS05930	SM00958	SecA preprotein cross-linking domain
MSG_RS05995	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
MSG_RS06005	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
MSG_RS06180	SM00387	Histidine kinase-like ATPases
MSG_RS06190	SM00046	Diacylglycerol kinase catalytic domain (presumed)
MSG_RS06210	SM00855	Phosphoglycerate mutase family
MSG_RS06225	SM00487	DEAD-like helicases superfamily
MSG_RS06225	SM00490	helicase superfamily c-terminal domain
MSG_RS06250	SM00235	Zinc-dependent metalloprotease
MSG_RS06255	SM00450	Rhodanese Homology Domain
MSG_RS06305	SM00341	Helicase and RNase D C-terminal
MSG_RS06345	SM00342	helix_turn_helix, arabinose operon control protein
MSG_RS06375	SM00834	Putative regulatory protein
MSG_RS06380	SM00347	helix_turn_helix multiple antibiotic resistance protein
MSG_RS06450	SM01012	MSG_RS06450
MSG_RS06460	SM00422	helix_turn_helix, mercury resistance
MSG_RS06470	SM01012	MSG_RS06470
MSG_RS06485	SM00642	Alpha-amylase domain
MSG_RS06490	SM00267	diguanylate cyclase
MSG_RS06580	SM00091	PAS domain
MSG_RS06580	SM00138	Methyltransferase, chemotaxis proteins 
MSG_RS06595	SM00342	helix_turn_helix, arabinose operon control protein
MSG_RS06620	SM00530	Helix-turn-helix XRE-family like proteins 
MSG_RS06735	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
MSG_RS06735	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
MSG_RS06740	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
MSG_RS06780	SM00867	YceI-like domain 
MSG_RS06825	SM00829	Enoylreductase
MSG_RS06830	SM00829	Enoylreductase
MSG_RS06865	SM00937	MSG_RS06865
MSG_RS06880	SM00382	ATPases associated with a variety of cellular activities
MSG_RS06935	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
MSG_RS06940	SM00387	Histidine kinase-like ATPases
MSG_RS06945	SM00448	cheY-homologous receiver domain
MSG_RS06950	SM00421	helix_turn_helix, Lux Regulon
MSG_RS06950	SM00448	cheY-homologous receiver domain
MSG_RS06965	SM00729	Elongator protein 3, MiaB family, Radical SAM
MSG_RS06970	SM00701	Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme.
MSG_RS07015	SM01230	MSG_RS07015
MSG_RS07020	SM00448	cheY-homologous receiver domain
MSG_RS07060	SM01006	Siderophore biosynthesis protein domain
MSG_RS07095	SM00382	ATPases associated with a variety of cellular activities
MSG_RS07170	SM00822	MSG_RS07170
MSG_RS07230	SM00822	MSG_RS07230
MSG_RS07275	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MSG_RS07275	SM00895	MSG_RS07275
MSG_RS07355	SM00422	helix_turn_helix, mercury resistance
MSG_RS07380	SM00822	MSG_RS07380
MSG_RS07445	SM00829	Enoylreductase
MSG_RS07465	SM00382	ATPases associated with a variety of cellular activities
MSG_RS07480	SM00507	HNH nucleases
MSG_RS07540	SM00347	helix_turn_helix multiple antibiotic resistance protein
MSG_RS07550	SM01240	MSG_RS07550
MSG_RS07560	SM00347	helix_turn_helix multiple antibiotic resistance protein
MSG_RS07630	SM00893	Electron transfer flavoprotein domain
MSG_RS07635	SM00893	Electron transfer flavoprotein domain
MSG_RS07645	SM00563	Phosphate acyltransferases
MSG_RS07675	SM00292	breast cancer carboxy-terminal domain
MSG_RS07675	SM00532	Ligase N family
MSG_RS07740	SM00845	GatB domain
MSG_RS07790	SM01329	MSG_RS07790
MSG_RS07825	SM00346	helix_turn_helix isocitrate lyase regulation
MSG_RS07840	SM00411	bacterial (prokaryotic) histone like domain
MSG_RS07845	SM00855	Phosphoglycerate mutase family
MSG_RS07880	SM00986	Uracil DNA glycosylase superfamily
MSG_RS07880	SM00987	UreE urease accessory protein, C-terminal domain 
MSG_RS07890	SM01120	MSG_RS07890
MSG_RS07890	SM01121	MSG_RS07890
MSG_RS07895	SM00487	DEAD-like helicases superfamily
MSG_RS07895	SM00490	helicase superfamily c-terminal domain
MSG_RS07960	SM00756	MSG_RS07960
MSG_RS07965	SM00878	Biotin carboxylase C-terminal domain
MSG_RS07990	SM00822	MSG_RS07990
MSG_RS07990	SM00825	Beta-ketoacyl synthase
MSG_RS07990	SM00826	MSG_RS07990
MSG_RS07990	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
MSG_RS07995	SM00825	Beta-ketoacyl synthase
MSG_RS07995	SM00826	MSG_RS07995
MSG_RS08010	SM00822	MSG_RS08010
MSG_RS08010	SM00823	Phosphopantetheine attachment site
MSG_RS08010	SM00825	Beta-ketoacyl synthase
MSG_RS08010	SM00826	MSG_RS08010
MSG_RS08010	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
MSG_RS08010	SM00829	Enoylreductase
MSG_RS08035	SM00382	ATPases associated with a variety of cellular activities
MSG_RS08040	SM00823	Phosphopantetheine attachment site
MSG_RS08040	SM00825	Beta-ketoacyl synthase
MSG_RS08040	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
MSG_RS08040	SM01294	MSG_RS08040
MSG_RS08045	SM00822	MSG_RS08045
MSG_RS08045	SM00823	Phosphopantetheine attachment site
MSG_RS08045	SM00825	Beta-ketoacyl synthase
MSG_RS08045	SM00826	MSG_RS08045
MSG_RS08045	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
MSG_RS08050	SM00822	MSG_RS08050
MSG_RS08050	SM00823	Phosphopantetheine attachment site
MSG_RS08050	SM00825	Beta-ketoacyl synthase
MSG_RS08050	SM00826	MSG_RS08050
MSG_RS08050	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
MSG_RS08050	SM00829	Enoylreductase
MSG_RS08055	SM00822	MSG_RS08055
MSG_RS08055	SM00823	Phosphopantetheine attachment site
MSG_RS08055	SM00825	Beta-ketoacyl synthase
MSG_RS08055	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
MSG_RS08055	SM01294	MSG_RS08055
MSG_RS08075	SM00358	Double-stranded RNA binding motif
MSG_RS08075	SM00535	Ribonuclease III family
MSG_RS08080	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
MSG_RS08080	SM01232	MSG_RS08080
MSG_RS08085	SM00899	MSG_RS08085
MSG_RS08110	SM00968	SMC proteins Flexible Hinge Domain
MSG_RS08120	SM00382	ATPases associated with a variety of cellular activities
MSG_RS08120	SM00962	SRP54-type protein, GTPase domain
MSG_RS08120	SM00963	SRP54-type protein, helical bundle domain
MSG_RS08130	SM00938	Nitrogen regulatory protein P-II
MSG_RS08135	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
MSG_RS08140	SM00487	DEAD-like helicases superfamily
MSG_RS08150	SM00382	ATPases associated with a variety of cellular activities
MSG_RS08150	SM00962	SRP54-type protein, GTPase domain
MSG_RS08150	SM00963	SRP54-type protein, helical bundle domain
MSG_RS08160	SM00220	Serine/Threonine protein kinases, catalytic domain
MSG_RS08240	SM01012	MSG_RS08240
MSG_RS08260	SM00382	ATPases associated with a variety of cellular activities
MSG_RS08270	SM00923	MbtH-like protein
MSG_RS08325	SM00347	helix_turn_helix multiple antibiotic resistance protein
MSG_RS08340	SM00563	Phosphate acyltransferases
MSG_RS08345	SM00862	Transcriptional regulatory protein, C terminal
MSG_RS08370	SM00729	Elongator protein 3, MiaB family, Radical SAM
MSG_RS08390	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
MSG_RS08400	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
MSG_RS08480	SM00327	von Willebrand factor (vWF) type A domain
MSG_RS08480	SM00382	ATPases associated with a variety of cellular activities
MSG_RS08525	SM00316	Ribosomal protein S1-like RNA-binding domain
MSG_RS08575	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
MSG_RS08615	SM00529	Helix-turn-helix diphteria tox regulatory element
MSG_RS08615	SM00899	MSG_RS08615
MSG_RS08620	SM00904	Riboflavin kinase
MSG_RS08625	SM01387	MSG_RS08625
MSG_RS08630	SM00316	Ribosomal protein S1-like RNA-binding domain
MSG_RS08630	SM00322	K homology RNA-binding domain
MSG_RS08650	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
MSG_RS08650	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
MSG_RS08655	SM00344	helix_turn_helix ASNC type
MSG_RS08710	SM00507	HNH nucleases
MSG_RS08725	SM00878	Biotin carboxylase C-terminal domain
MSG_RS08800	SM01130	MSG_RS08800
MSG_RS08805	SM00849	Metallo-beta-lactamase superfamily
MSG_RS08835	SM00843	MSG_RS08835
MSG_RS08850	SM00530	Helix-turn-helix XRE-family like proteins 
MSG_RS08885	SM00382	ATPases associated with a variety of cellular activities
MSG_RS08895	SM00729	Elongator protein 3, MiaB family, Radical SAM
MSG_RS08950	SM00257	Lysin motif
MSG_RS08995	SM00529	Helix-turn-helix diphteria tox regulatory element
MSG_RS08995	SM00899	MSG_RS08995
MSG_RS09115	SM00861	Transketolase, pyrimidine binding domain
MSG_RS09140	SM00341	Helicase and RNase D C-terminal
MSG_RS09140	SM00474	3'-5' exonuclease
MSG_RS09575	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
MSG_RS09665	SM00278	Helix-hairpin-helix DNA-binding motif class 1
MSG_RS09670	SM00382	ATPases associated with a variety of cellular activities
MSG_RS09685	SM00823	Phosphopantetheine attachment site
MSG_RS09695	SM01323	MSG_RS09695
MSG_RS09720	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
MSG_RS09720	SM00954	Region found in RelA / SpoT proteins
MSG_RS09725	SM00220	Serine/Threonine protein kinases, catalytic domain
MSG_RS09740	SM00849	Metallo-beta-lactamase superfamily
MSG_RS09765	SM00729	Elongator protein 3, MiaB family, Radical SAM
MSG_RS09820	SM00460	Transglutaminase/protease-like homologues
MSG_RS09835	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
MSG_RS09835	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MSG_RS09855	SM00460	Transglutaminase/protease-like homologues
MSG_RS09865	SM00382	ATPases associated with a variety of cellular activities
MSG_RS09880	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
MSG_RS09885	SM00732	Likely ribonuclease with RNase H fold.
MSG_RS09945	SM00841	Elongation factor P, C-terminal
MSG_RS09945	SM01185	MSG_RS09945
MSG_RS09965	SM00530	Helix-turn-helix XRE-family like proteins 
MSG_RS10005	SM01230	MSG_RS10005
MSG_RS10030	SM00829	Enoylreductase
MSG_RS10035	SM00849	Metallo-beta-lactamase superfamily
MSG_RS10055	SM00822	MSG_RS10055
MSG_RS10065	SM00881	CoA binding domain
MSG_RS10105	SM00382	ATPases associated with a variety of cellular activities
MSG_RS10120	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MSG_RS10120	SM00895	MSG_RS10120
MSG_RS10130	SM00347	helix_turn_helix multiple antibiotic resistance protein
MSG_RS10155	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MSG_RS10155	SM00866	MSG_RS10155
MSG_RS10175	SM00382	ATPases associated with a variety of cellular activities
MSG_RS10180	SM00567	E-Z type HEAT repeats
MSG_RS10200	SM00637	MSG_RS10200
MSG_RS10235	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
MSG_RS10240	SM00851	MGS-like domain
MSG_RS10240	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
MSG_RS10245	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
MSG_RS10255	SM00072	Guanylate kinase homologues.
MSG_RS10260	SM01409	MSG_RS10260
MSG_RS10280	SM00344	helix_turn_helix ASNC type
MSG_RS10285	SM00822	MSG_RS10285
MSG_RS10315	SM00347	helix_turn_helix multiple antibiotic resistance protein
MSG_RS10385	SM00278	Helix-hairpin-helix DNA-binding motif class 1
MSG_RS10385	SM00465	GIY-YIG type nucleases (URI domain)
MSG_RS10435	SM00563	Phosphate acyltransferases
MSG_RS10450	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
MSG_RS10515	SM00861	Transketolase, pyrimidine binding domain
MSG_RS10525	SM00829	Enoylreductase
MSG_RS10555	SM00382	ATPases associated with a variety of cellular activities
MSG_RS10580	SM00382	ATPases associated with a variety of cellular activities
MSG_RS10620	SM00382	ATPases associated with a variety of cellular activities
MSG_RS10665	SM00327	von Willebrand factor (vWF) type A domain
MSG_RS10675	SM00822	MSG_RS10675
MSG_RS10700	SM00244	prohibitin homologues
MSG_RS10735	SM00382	ATPases associated with a variety of cellular activities
MSG_RS10865	SM00382	ATPases associated with a variety of cellular activities
MSG_RS10885	SM00923	MbtH-like protein
MSG_RS10890	SM00823	Phosphopantetheine attachment site
MSG_RS10895	SM00823	Phosphopantetheine attachment site
MSG_RS10900	SM00923	MbtH-like protein
MSG_RS10905	SM00823	Phosphopantetheine attachment site
MSG_RS10910	SM00822	MSG_RS10910
MSG_RS10910	SM00823	Phosphopantetheine attachment site
MSG_RS10910	SM00825	Beta-ketoacyl synthase
MSG_RS10910	SM00826	MSG_RS10910
MSG_RS10910	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
MSG_RS10910	SM00829	Enoylreductase
MSG_RS10940	SM00650	Ribosomal RNA adenine dimethylases
MSG_RS10950	SM00870	MSG_RS10950
MSG_RS10960	SM00363	S4 RNA-binding domain
MSG_RS10980	SM00822	MSG_RS10980
MSG_RS10995	SM00481	DNA polymerase alpha chain like domain
MSG_RS11005	SM00563	Phosphate acyltransferases
MSG_RS11025	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MSG_RS11035	SM00642	Alpha-amylase domain
MSG_RS11040	SM00642	Alpha-amylase domain
MSG_RS11045	SM00642	Alpha-amylase domain
MSG_RS11105	SM00729	Elongator protein 3, MiaB family, Radical SAM
MSG_RS11105	SM00876	Biotin and Thiamin Synthesis associated domain
MSG_RS11200	SM00220	Serine/Threonine protein kinases, catalytic domain
MSG_RS11270	SM00382	ATPases associated with a variety of cellular activities
MSG_RS11275	SM00382	ATPases associated with a variety of cellular activities
MSG_RS11295	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
MSG_RS11305	SM00448	cheY-homologous receiver domain
MSG_RS11305	SM01012	MSG_RS11305
MSG_RS11320	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
MSG_RS11320	SM00474	3'-5' exonuclease
MSG_RS11320	SM00475	5'-3' exonuclease
MSG_RS11320	SM00482	DNA polymerase A domain
MSG_RS11330	SM00316	Ribosomal protein S1-like RNA-binding domain
MSG_RS11365	SM00240	Forkhead associated domain
MSG_RS11365	SM00382	ATPases associated with a variety of cellular activities
MSG_RS11375	SM00487	DEAD-like helicases superfamily
MSG_RS11375	SM00490	helicase superfamily c-terminal domain
MSG_RS11405	SM00849	Metallo-beta-lactamase superfamily
MSG_RS11425	SM00357	Cold shock protein domain
MSG_RS11430	SM00460	Transglutaminase/protease-like homologues
MSG_RS11465	SM00967	RNA 2'-O ribose methyltransferase substrate binding
MSG_RS11475	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
MSG_RS11490	SM00873	B3/4 domain
MSG_RS11490	SM00874	tRNA synthetase B5 domain
MSG_RS11490	SM00896	Ferredoxin-fold anticodon binding domain
MSG_RS11495	SM00859	Semialdehyde dehydrogenase, NAD binding domain
MSG_RS11540	SM00822	MSG_RS11540
MSG_RS11540	SM00823	Phosphopantetheine attachment site
MSG_RS11540	SM00825	Beta-ketoacyl synthase
MSG_RS11540	SM00826	MSG_RS11540
MSG_RS11540	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
MSG_RS11540	SM00829	Enoylreductase
MSG_RS11540	SM01294	MSG_RS11540
MSG_RS11545	SM00822	MSG_RS11545
MSG_RS11545	SM00823	Phosphopantetheine attachment site
MSG_RS11545	SM00825	Beta-ketoacyl synthase
MSG_RS11545	SM00826	MSG_RS11545
MSG_RS11545	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
MSG_RS11545	SM00829	Enoylreductase
MSG_RS11545	SM01294	MSG_RS11545
MSG_RS11550	SM00823	Phosphopantetheine attachment site
MSG_RS11550	SM00825	Beta-ketoacyl synthase
MSG_RS11550	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
MSG_RS11565	SM00382	ATPases associated with a variety of cellular activities
MSG_RS11595	SM00382	ATPases associated with a variety of cellular activities
MSG_RS11605	SM00382	ATPases associated with a variety of cellular activities
MSG_RS11655	SM00382	ATPases associated with a variety of cellular activities
MSG_RS11670	SM00363	S4 RNA-binding domain
MSG_RS11695	SM00363	S4 RNA-binding domain
MSG_RS11760	SM00363	S4 RNA-binding domain
MSG_RS11770	SM00382	ATPases associated with a variety of cellular activities
MSG_RS11780	SM00530	Helix-turn-helix XRE-family like proteins 
MSG_RS11785	SM00822	MSG_RS11785
MSG_RS11795	SM00346	helix_turn_helix isocitrate lyase regulation
MSG_RS11795	SM00419	helix_turn_helix, cAMP Regulatory protein
MSG_RS11860	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
MSG_RS11915	SM00347	helix_turn_helix multiple antibiotic resistance protein
MSG_RS11930	SM00923	MbtH-like protein
MSG_RS11955	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
MSG_RS11955	SM00331	Sigma factor PP2C-like phosphatases
MSG_RS11980	SM00267	diguanylate cyclase
MSG_RS12005	SM00220	Serine/Threonine protein kinases, catalytic domain
MSG_RS12035	SM01230	MSG_RS12035
MSG_RS12045	SM00220	Serine/Threonine protein kinases, catalytic domain
MSG_RS12055	SM00240	Forkhead associated domain
MSG_RS12060	SM00100	Cyclic nucleotide-monophosphate binding domain
MSG_RS12065	SM00220	Serine/Threonine protein kinases, catalytic domain
MSG_RS12085	SM00903	Flavin reductase like domain
MSG_RS12090	SM01012	MSG_RS12090
MSG_RS12190	SM00346	helix_turn_helix isocitrate lyase regulation
MSG_RS12235	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
MSG_RS12265	SM00240	Forkhead associated domain
MSG_RS12265	SM00382	ATPases associated with a variety of cellular activities
MSG_RS12355	SM01007	Class II Aldolase and Adducin N-terminal domain
MSG_RS12420	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
MSG_RS12485	SM01110	MSG_RS12485
MSG_RS12510	SM00487	DEAD-like helicases superfamily
MSG_RS12510	SM00490	helicase superfamily c-terminal domain
MSG_RS12555	SM00861	Transketolase, pyrimidine binding domain
MSG_RS12580	SM01012	MSG_RS12580
MSG_RS12585	SM00346	helix_turn_helix isocitrate lyase regulation
MSG_RS12635	SM00382	ATPases associated with a variety of cellular activities
MSG_RS12705	SM00382	ATPases associated with a variety of cellular activities
MSG_RS12785	SM00382	ATPases associated with a variety of cellular activities
MSG_RS12795	SM00957	SecA DEAD-like domain
MSG_RS12795	SM00958	SecA preprotein cross-linking domain
MSG_RS12825	SM00240	Forkhead associated domain
MSG_RS12830	SM00422	helix_turn_helix, mercury resistance
MSG_RS12840	SM00422	helix_turn_helix, mercury resistance
MSG_RS12850	SM00347	helix_turn_helix multiple antibiotic resistance protein
MSG_RS12855	SM00947	Carbonic anhydrase
MSG_RS12915	SM00116	Domain in cystathionine beta-synthase and other proteins.
MSG_RS12915	SM01091	Transporter associated domain
MSG_RS12920	SM01240	MSG_RS12920
MSG_RS12925	SM01350	MSG_RS12925
MSG_RS13005	SM00382	ATPases associated with a variety of cellular activities
MSG_RS13025	SM00829	Enoylreductase
MSG_RS13075	SM00382	ATPases associated with a variety of cellular activities
MSG_RS13075	SM00464	Found in ATP-dependent protease La (LON)
MSG_RS13085	SM00342	helix_turn_helix, arabinose operon control protein
MSG_RS13110	SM00642	Alpha-amylase domain
MSG_RS13165	SM01230	MSG_RS13165
MSG_RS13205	SM00830	Chorismate mutase type II
MSG_RS13220	SM00867	YceI-like domain 
MSG_RS13225	SM00829	Enoylreductase
MSG_RS13270	SM00829	Enoylreductase
MSG_RS13295	SM00852	Probable molybdopterin binding domain
MSG_RS13370	SM00829	Enoylreductase
MSG_RS13385	SM00849	Metallo-beta-lactamase superfamily
MSG_RS13530	SM00829	Enoylreductase
MSG_RS13575	SM01110	MSG_RS13575
MSG_RS13640	SM01110	MSG_RS13640
MSG_RS13660	SM01110	MSG_RS13660
MSG_RS13790	SM00833	Cobalamin synthesis protein cobW C-terminal domain
MSG_RS13890	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
MSG_RS13890	SM00387	Histidine kinase-like ATPases
MSG_RS13895	SM00421	helix_turn_helix, Lux Regulon
MSG_RS13895	SM00448	cheY-homologous receiver domain
MSG_RS13945	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
MSG_RS13945	SM00091	PAS domain
MSG_RS13945	SM00387	Histidine kinase-like ATPases
MSG_RS14065	SM00116	Domain in cystathionine beta-synthase and other proteins.
MSG_RS14075	SM00448	cheY-homologous receiver domain
MSG_RS14080	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
MSG_RS14085	SM00244	prohibitin homologues
MSG_RS14200	SM00829	Enoylreductase
MSG_RS14220	SM00587	ZnF_C4 abd HLH domain containing kinases domain
MSG_RS14345	SM01116	MSG_RS14345
MSG_RS14435	SM00382	ATPases associated with a variety of cellular activities
MSG_RS14470	SM00220	Serine/Threonine protein kinases, catalytic domain
MSG_RS14495	SM00587	ZnF_C4 abd HLH domain containing kinases domain
MSG_RS14515	SM00822	MSG_RS14515
MSG_RS14535	SM00822	MSG_RS14535
MSG_RS14535	SM00823	Phosphopantetheine attachment site
MSG_RS14535	SM00825	Beta-ketoacyl synthase
MSG_RS14535	SM00826	MSG_RS14535
MSG_RS14535	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
MSG_RS14535	SM00829	Enoylreductase
MSG_RS14535	SM01294	MSG_RS14535
MSG_RS14645	SM00822	MSG_RS14645
MSG_RS14705	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
MSG_RS14705	SM00475	5'-3' exonuclease
MSG_RS14715	SM00487	DEAD-like helicases superfamily
MSG_RS14715	SM00490	helicase superfamily c-terminal domain
MSG_RS14715	SM01142	MSG_RS14715
MSG_RS14775	SM00382	ATPases associated with a variety of cellular activities
MSG_RS14880	SM01018	B12 binding domain
MSG_RS14900	SM00822	MSG_RS14900
MSG_RS14925	SM00855	Phosphoglycerate mutase family
MSG_RS14975	SM00857	Resolvase, N terminal domain
MSG_RS15020	SM00347	helix_turn_helix multiple antibiotic resistance protein
MSG_RS15035	SM00835	Cupin
MSG_RS15075	SM00864	Tubulin/FtsZ family, GTPase domain
MSG_RS15075	SM00865	Tubulin/FtsZ family, C-terminal domain
MSG_RS15205	SM00220	Serine/Threonine protein kinases, catalytic domain
MSG_RS15235	SM00563	Phosphate acyltransferases
MSG_RS15285	SM00465	GIY-YIG type nucleases (URI domain)
MSG_RS15285	SM00479	MSG_RS15285
MSG_RS15440	SM00729	Elongator protein 3, MiaB family, Radical SAM
MSG_RS15455	SM01230	MSG_RS15455
MSG_RS15500	SM01230	MSG_RS15500
MSG_RS15525	SM00880	MSG_RS15525
MSG_RS15525	SM01118	MSG_RS15525
MSG_RS15550	SM00855	Phosphoglycerate mutase family
MSG_RS15580	SM00226	Low molecular weight phosphatase family
MSG_RS15725	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
MSG_RS15735	SM00825	Beta-ketoacyl synthase
MSG_RS15740	SM00825	Beta-ketoacyl synthase
MSG_RS15775	SM00046	Diacylglycerol kinase catalytic domain (presumed)
MSG_RS15810	SM00829	Enoylreductase
MSG_RS15815	SM00849	Metallo-beta-lactamase superfamily
MSG_RS15875	SM00646	MSG_RS15875
MSG_RS15880	SM01110	MSG_RS15880
MSG_RS15920	SM00507	HNH nucleases
MSG_RS15945	SM00219	Tyrosine kinase, catalytic domain
MSG_RS15955	SM00563	Phosphate acyltransferases
MSG_RS16005	SM00450	Rhodanese Homology Domain
MSG_RS16115	SM00116	Domain in cystathionine beta-synthase and other proteins.
MSG_RS16115	SM00924	MgtE intracellular N domain
MSG_RS16145	SM00387	Histidine kinase-like ATPases
MSG_RS16170	SM00855	Phosphoglycerate mutase family
MSG_RS16175	SM00052	Putative diguanylate phosphodiesterase
MSG_RS16175	SM00267	diguanylate cyclase
MSG_RS16215	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
MSG_RS16215	SM00862	Transcriptional regulatory protein, C terminal
MSG_RS16215	SM01043	Bacterial transcriptional activator domain
MSG_RS16235	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MSG_RS16235	SM00387	Histidine kinase-like ATPases
MSG_RS16235	SM00388	His Kinase A (phosphoacceptor) domain
MSG_RS16240	SM00448	cheY-homologous receiver domain
MSG_RS16240	SM00862	Transcriptional regulatory protein, C terminal
MSG_RS16250	SM00354	helix_turn _helix lactose operon repressor
MSG_RS16270	SM00220	Serine/Threonine protein kinases, catalytic domain
MSG_RS16285	SM00829	Enoylreductase
MSG_RS16315	SM00387	Histidine kinase-like ATPases
MSG_RS16435	SM00344	helix_turn_helix ASNC type
MSG_RS16455	SM00382	ATPases associated with a variety of cellular activities
MSG_RS16460	SM00347	helix_turn_helix multiple antibiotic resistance protein
MSG_RS16485	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
MSG_RS16495	SM00450	Rhodanese Homology Domain
MSG_RS16495	SM00849	Metallo-beta-lactamase superfamily
MSG_RS16500	SM00450	Rhodanese Homology Domain
MSG_RS16505	SM00919	Malic enzyme, NAD binding domain
MSG_RS16505	SM01274	MSG_RS16505
MSG_RS16590	SM01012	MSG_RS16590
MSG_RS16605	SM01007	Class II Aldolase and Adducin N-terminal domain
MSG_RS16625	SM00400	zinc finger
MSG_RS16625	SM00493	MSG_RS16625
MSG_RS16625	SM00766	DNA primase DnaG DnaB-binding
MSG_RS16635	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
MSG_RS16660	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
MSG_RS16705	SM01091	Transporter associated domain
MSG_RS16715	SM00322	K homology RNA-binding domain
MSG_RS16725	SM00271	DnaJ molecular chaperone homology domain
MSG_RS16760	SM00923	MbtH-like protein
MSG_RS16770	SM00823	Phosphopantetheine attachment site
MSG_RS16770	SM01294	MSG_RS16770
MSG_RS16775	SM00823	Phosphopantetheine attachment site
MSG_RS16780	SM00822	MSG_RS16780
MSG_RS16780	SM00823	Phosphopantetheine attachment site
MSG_RS16780	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
MSG_RS16785	SM00825	Beta-ketoacyl synthase
MSG_RS16795	SM00823	Phosphopantetheine attachment site
MSG_RS16825	SM00422	helix_turn_helix, mercury resistance
MSG_RS16850	SM00729	Elongator protein 3, MiaB family, Radical SAM
MSG_RS16875	SM00382	ATPases associated with a variety of cellular activities
MSG_RS16915	SM00838	Elongation factor G C-terminus
MSG_RS16925	SM00116	Domain in cystathionine beta-synthase and other proteins.
MSG_RS16930	SM00849	Metallo-beta-lactamase superfamily
MSG_RS16935	SM00460	Transglutaminase/protease-like homologues
MSG_RS16965	SM00278	Helix-hairpin-helix DNA-binding motif class 1
MSG_RS17010	SM00855	Phosphoglycerate mutase family
MSG_RS17030	SM00382	ATPases associated with a variety of cellular activities
MSG_RS17040	SM00100	Cyclic nucleotide-monophosphate binding domain
MSG_RS17045	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
MSG_RS17045	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MSG_RS17055	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MSG_RS17055	SM00866	MSG_RS17055
MSG_RS17135	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
MSG_RS17155	SM00316	Ribosomal protein S1-like RNA-binding domain
MSG_RS17160	SM00562	MSG_RS17160
MSG_RS17210	SM00382	ATPases associated with a variety of cellular activities
MSG_RS17210	SM00994	ClpX C4-type zinc finger
MSG_RS17210	SM01086	C-terminal, D2-small domain, of ClpB protein
MSG_RS17250	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
MSG_RS17250	SM01232	MSG_RS17250
MSG_RS17285	SM00507	HNH nucleases
MSG_RS17295	SM00642	Alpha-amylase domain
MSG_RS17320	SM00382	ATPases associated with a variety of cellular activities
MSG_RS17340	SM00563	Phosphate acyltransferases
MSG_RS17345	SM00563	Phosphate acyltransferases
MSG_RS17465	SM00878	Biotin carboxylase C-terminal domain
MSG_RS17500	SM00479	MSG_RS17500
MSG_RS17550	SM00382	ATPases associated with a variety of cellular activities
MSG_RS17635	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
MSG_RS17710	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MSG_RS17710	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
MSG_RS17710	SM00895	MSG_RS17710
MSG_RS17715	SM00822	MSG_RS17715
MSG_RS17775	SM00331	Sigma factor PP2C-like phosphatases
MSG_RS17960	SM01130	MSG_RS17960
MSG_RS17985	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MSG_RS17985	SM00895	MSG_RS17985
MSG_RS18005	SM00822	MSG_RS18005
MSG_RS18030	SM00382	ATPases associated with a variety of cellular activities
MSG_RS18035	SM00382	ATPases associated with a variety of cellular activities
MSG_RS18050	SM01006	Siderophore biosynthesis protein domain
MSG_RS18110	SM00487	DEAD-like helicases superfamily
MSG_RS18110	SM00491	MSG_RS18110
MSG_RS18125	SM00642	Alpha-amylase domain
MSG_RS18155	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
MSG_RS18155	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MSG_RS18200	SM00342	helix_turn_helix, arabinose operon control protein
MSG_RS18200	SM00478	endonuclease III
MSG_RS18200	SM01009	AlkA N-terminal domain
MSG_RS18245	SM00382	ATPases associated with a variety of cellular activities
MSG_RS18300	SM00937	MSG_RS18300
MSG_RS18310	SM00357	Cold shock protein domain
MSG_RS18310	SM00382	ATPases associated with a variety of cellular activities
MSG_RS18310	SM00959	Rho termination factor, N-terminal domain
MSG_RS18340	SM00836	DALR anticodon binding domain
MSG_RS18340	SM01016	Arginyl tRNA synthetase N terminal dom
MSG_RS18395	SM00421	helix_turn_helix, Lux Regulon
MSG_RS18400	SM00052	Putative diguanylate phosphodiesterase
MSG_RS18485	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
MSG_RS18500	SM00382	ATPases associated with a variety of cellular activities
MSG_RS18530	SM00855	Phosphoglycerate mutase family
MSG_RS18545	SM00382	ATPases associated with a variety of cellular activities
MSG_RS18550	SM00382	ATPases associated with a variety of cellular activities
MSG_RS18555	SM00240	Forkhead associated domain
MSG_RS18555	SM00862	Transcriptional regulatory protein, C terminal
MSG_RS18555	SM01043	Bacterial transcriptional activator domain
MSG_RS18560	SM00220	Serine/Threonine protein kinases, catalytic domain
MSG_RS18570	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
MSG_RS18575	SM00986	Uracil DNA glycosylase superfamily
MSG_RS18575	SM00987	UreE urease accessory protein, C-terminal domain 
MSG_RS18590	SM00052	Putative diguanylate phosphodiesterase
MSG_RS18590	SM00267	diguanylate cyclase
MSG_RS18605	SM00986	Uracil DNA glycosylase superfamily
MSG_RS18605	SM00987	UreE urease accessory protein, C-terminal domain 
MSG_RS18680	SM00487	DEAD-like helicases superfamily
MSG_RS18680	SM00490	helicase superfamily c-terminal domain
MSG_RS18705	SM00861	Transketolase, pyrimidine binding domain
MSG_RS18710	SM00822	MSG_RS18710
MSG_RS18720	SM00919	Malic enzyme, NAD binding domain
MSG_RS18720	SM01274	MSG_RS18720
MSG_RS18740	SM00382	ATPases associated with a variety of cellular activities
MSG_RS18770	SM00924	MgtE intracellular N domain
MSG_RS18795	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
MSG_RS18820	SM00382	ATPases associated with a variety of cellular activities
MSG_RS18835	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
MSG_RS19060	SM00822	MSG_RS19060
MSG_RS19060	SM00823	Phosphopantetheine attachment site
MSG_RS19060	SM00825	Beta-ketoacyl synthase
MSG_RS19060	SM00826	MSG_RS19060
MSG_RS19060	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
MSG_RS19060	SM00829	Enoylreductase
MSG_RS19090	SM00729	Elongator protein 3, MiaB family, Radical SAM
MSG_RS19115	SM00838	Elongation factor G C-terminus
MSG_RS19195	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MSG_RS19215	SM00822	MSG_RS19215
MSG_RS19330	SM00530	Helix-turn-helix XRE-family like proteins 
MSG_RS19340	SM00507	HNH nucleases
MSG_RS19405	SM01350	MSG_RS19405
MSG_RS19415	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
MSG_RS19555	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
MSG_RS19555	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MSG_RS19565	SM00670	Large family of predicted nucleotide-binding domains
MSG_RS19645	SM00116	Domain in cystathionine beta-synthase and other proteins.
MSG_RS19685	SM00450	Rhodanese Homology Domain
MSG_RS19790	SM00448	cheY-homologous receiver domain
MSG_RS19790	SM00862	Transcriptional regulatory protein, C terminal
MSG_RS19795	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MSG_RS19795	SM00387	Histidine kinase-like ATPases
MSG_RS19795	SM00388	His Kinase A (phosphoacceptor) domain
MSG_RS19820	SM00387	Histidine kinase-like ATPases
MSG_RS19820	SM00388	His Kinase A (phosphoacceptor) domain
MSG_RS19825	SM00448	cheY-homologous receiver domain
MSG_RS19825	SM00862	Transcriptional regulatory protein, C terminal
MSG_RS19845	SM01192	MSG_RS19845
MSG_RS19845	SM01193	MSG_RS19845
MSG_RS19860	SM00487	DEAD-like helicases superfamily
MSG_RS19860	SM00490	helicase superfamily c-terminal domain
MSG_RS19860	SM00982	MSG_RS19860
MSG_RS19860	SM01058	CarD-like/TRCF domain
MSG_RS19885	SM01400	MSG_RS19885
MSG_RS19915	SM00342	helix_turn_helix, arabinose operon control protein
MSG_RS19935	SM00650	Ribosomal RNA adenine dimethylases
MSG_RS19940	SM01208	MSG_RS19940
MSG_RS19955	SM00091	PAS domain
MSG_RS20015	SM00984	UDP binding domain
MSG_RS20055	SM00052	Putative diguanylate phosphodiesterase
MSG_RS20055	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
MSG_RS20055	SM00267	diguanylate cyclase
MSG_RS20115	SM00100	Cyclic nucleotide-monophosphate binding domain
MSG_RS20155	SM00052	Putative diguanylate phosphodiesterase
MSG_RS20190	SM00852	Probable molybdopterin binding domain
MSG_RS20205	SM00834	Putative regulatory protein
MSG_RS20210	SM00858	MSG_RS20210
MSG_RS20220	SM00852	Probable molybdopterin binding domain
MSG_RS20225	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
MSG_RS20235	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MSG_RS20235	SM00387	Histidine kinase-like ATPases
MSG_RS20235	SM00388	His Kinase A (phosphoacceptor) domain
MSG_RS20240	SM00448	cheY-homologous receiver domain
MSG_RS20240	SM00862	Transcriptional regulatory protein, C terminal
MSG_RS20265	SM00878	Biotin carboxylase C-terminal domain
MSG_RS20305	SM00327	von Willebrand factor (vWF) type A domain
MSG_RS20315	SM00798	AICARFT/IMPCHase bienzyme
MSG_RS20315	SM00851	MGS-like domain
MSG_RS20345	SM00881	CoA binding domain
MSG_RS20370	SM00830	Chorismate mutase type II
MSG_RS20400	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
MSG_RS20400	SM01232	MSG_RS20400
MSG_RS20440	SM00849	Metallo-beta-lactamase superfamily
MSG_RS20470	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
MSG_RS20655	SM00448	cheY-homologous receiver domain
MSG_RS20655	SM00862	Transcriptional regulatory protein, C terminal
MSG_RS20660	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MSG_RS20660	SM00387	Histidine kinase-like ATPases
MSG_RS20660	SM00388	His Kinase A (phosphoacceptor) domain
MSG_RS20695	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
MSG_RS20695	SM00862	Transcriptional regulatory protein, C terminal
MSG_RS20695	SM01043	Bacterial transcriptional activator domain
MSG_RS20745	SM00347	helix_turn_helix multiple antibiotic resistance protein
MSG_RS20780	SM00357	Cold shock protein domain
MSG_RS20790	SM00729	Elongator protein 3, MiaB family, Radical SAM
MSG_RS20810	SM00852	Probable molybdopterin binding domain
MSG_RS20830	SM00487	DEAD-like helicases superfamily
MSG_RS20830	SM00490	helicase superfamily c-terminal domain
MSG_RS20835	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MSG_RS20835	SM00895	MSG_RS20835
MSG_RS20895	SM00382	ATPases associated with a variety of cellular activities
MSG_RS20900	SM00062	Bacterial periplasmic substrate-binding proteins
MSG_RS20945	SM00347	helix_turn_helix multiple antibiotic resistance protein
MSG_RS21140	SM00822	MSG_RS21140
MSG_RS21180	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MSG_RS21180	SM00387	Histidine kinase-like ATPases
MSG_RS21180	SM00388	His Kinase A (phosphoacceptor) domain
MSG_RS21220	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
MSG_RS21375	SM00347	helix_turn_helix multiple antibiotic resistance protein
MSG_RS21380	SM00822	MSG_RS21380
MSG_RS21475	SM00346	helix_turn_helix isocitrate lyase regulation
MSG_RS21490	SM00421	helix_turn_helix, Lux Regulon
MSG_RS21490	SM00448	cheY-homologous receiver domain
MSG_RS21635	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
MSG_RS21675	SM00382	ATPases associated with a variety of cellular activities
MSG_RS21700	SM00862	Transcriptional regulatory protein, C terminal
MSG_RS21720	SM00450	Rhodanese Homology Domain
MSG_RS21865	SM00829	Enoylreductase
MSG_RS21905	SM01211	MSG_RS21905
MSG_RS21920	SM00849	Metallo-beta-lactamase superfamily
MSG_RS21960	SM00998	Adenylosuccinate lyase C-terminus
MSG_RS21985	SM01209	MSG_RS21985
MSG_RS21985	SM01210	MSG_RS21985
MSG_RS22040	SM00829	Enoylreductase
MSG_RS22060	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MSG_RS22060	SM00387	Histidine kinase-like ATPases
MSG_RS22060	SM00388	His Kinase A (phosphoacceptor) domain
MSG_RS22065	SM00448	cheY-homologous receiver domain
MSG_RS22065	SM00862	Transcriptional regulatory protein, C terminal
MSG_RS22110	SM00460	Transglutaminase/protease-like homologues
MSG_RS22210	SM00822	MSG_RS22210
MSG_RS22215	SM00822	MSG_RS22215
MSG_RS22295	SM00822	MSG_RS22295
MSG_RS22350	SM00421	helix_turn_helix, Lux Regulon
MSG_RS22350	SM00448	cheY-homologous receiver domain
MSG_RS22450	SM00859	Semialdehyde dehydrogenase, NAD binding domain
MSG_RS22525	SM00822	MSG_RS22525
MSG_RS22540	SM00882	Coenzyme A transferase
MSG_RS22545	SM00882	Coenzyme A transferase
MSG_RS22625	SM00903	Flavin reductase like domain
MSG_RS22665	SM00354	helix_turn _helix lactose operon repressor
MSG_RS22675	SM00382	ATPases associated with a variety of cellular activities
MSG_RS22700	SM00421	helix_turn_helix, Lux Regulon
MSG_RS22715	SM00967	RNA 2'-O ribose methyltransferase substrate binding
MSG_RS22720	SM00840	MSG_RS22720
MSG_RS22735	SM01058	CarD-like/TRCF domain
MSG_RS22745	SM00382	ATPases associated with a variety of cellular activities
MSG_RS22760	SM00947	Carbonic anhydrase
MSG_RS22765	SM00478	endonuclease III
MSG_RS22765	SM00525	MSG_RS22765
MSG_RS22785	SM00855	Phosphoglycerate mutase family
MSG_RS22800	SM00382	ATPases associated with a variety of cellular activities
MSG_RS22800	SM01086	C-terminal, D2-small domain, of ClpB protein
MSG_RS22850	SM00905	Dihydroneopterin aldolase
MSG_RS22975	SM00382	ATPases associated with a variety of cellular activities
MSG_RS22980	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
MSG_RS22980	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MSG_RS22985	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
MSG_RS22985	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
MSG_RS22985	SM00493	MSG_RS22985
MSG_RS22995	SM00357	Cold shock protein domain
MSG_RS23000	SM00487	DEAD-like helicases superfamily
MSG_RS23000	SM00490	helicase superfamily c-terminal domain
MSG_RS23060	SM00382	ATPases associated with a variety of cellular activities
MSG_RS23125	SM00478	endonuclease III
MSG_RS23125	SM00525	MSG_RS23125
MSG_RS23135	SM00100	Cyclic nucleotide-monophosphate binding domain
MSG_RS23135	SM00419	helix_turn_helix, cAMP Regulatory protein
MSG_RS23140	SM00849	Metallo-beta-lactamase superfamily
MSG_RS23170	SM00740	MSG_RS23170
MSG_RS23235	SM00387	Histidine kinase-like ATPases
MSG_RS23240	SM00331	Sigma factor PP2C-like phosphatases
MSG_RS23245	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
MSG_RS23245	SM00331	Sigma factor PP2C-like phosphatases
MSG_RS23250	SM01236	MSG_RS23250
MSG_RS23255	SM00704	CDGSH-type zinc finger. Function unknown.
MSG_RS23295	SM00382	ATPases associated with a variety of cellular activities
MSG_RS23370	SM01060	MSG_RS23370
MSG_RS23395	SM00859	Semialdehyde dehydrogenase, NAD binding domain
MSG_RS23405	SM00507	HNH nucleases
MSG_RS23410	SM00917	LeuA allosteric (dimerisation) domain
MSG_RS23420	SM00479	MSG_RS23420
MSG_RS23440	SM00278	Helix-hairpin-helix DNA-binding motif class 1
MSG_RS23440	SM00493	MSG_RS23440
MSG_RS23450	SM00646	MSG_RS23450
MSG_RS23465	SM00828	Methyltransferase  in polyketide synthase (PKS) enzymes.
MSG_RS23475	SM00382	ATPases associated with a variety of cellular activities
MSG_RS23520	SM01119	MSG_RS23520
MSG_RS23580	SM01110	MSG_RS23580
MSG_RS23605	SM00822	MSG_RS23605
MSG_RS23630	SM00267	diguanylate cyclase
MSG_RS23670	SM00382	ATPases associated with a variety of cellular activities
MSG_RS23700	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
MSG_RS23710	SM00226	Low molecular weight phosphatase family
MSG_RS23745	SM00849	Metallo-beta-lactamase superfamily
MSG_RS23825	SM00382	ATPases associated with a variety of cellular activities
MSG_RS23845	SM00855	Phosphoglycerate mutase family
MSG_RS23865	SM00822	MSG_RS23865
MSG_RS23880	SM00829	Enoylreductase
MSG_RS23885	SM00849	Metallo-beta-lactamase superfamily
MSG_RS23895	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MSG_RS23895	SM00387	Histidine kinase-like ATPases
MSG_RS23895	SM00388	His Kinase A (phosphoacceptor) domain
MSG_RS23900	SM00448	cheY-homologous receiver domain
MSG_RS23900	SM00862	Transcriptional regulatory protein, C terminal
MSG_RS23915	SM00347	helix_turn_helix multiple antibiotic resistance protein
MSG_RS24020	SM00829	Enoylreductase
MSG_RS24040	SM00382	ATPases associated with a variety of cellular activities
MSG_RS24110	SM00240	Forkhead associated domain
MSG_RS24110	SM00862	Transcriptional regulatory protein, C terminal
MSG_RS24110	SM01043	Bacterial transcriptional activator domain
MSG_RS24135	SM00240	Forkhead associated domain
MSG_RS24140	SM00100	Cyclic nucleotide-monophosphate binding domain
MSG_RS24140	SM00419	helix_turn_helix, cAMP Regulatory protein
MSG_RS24165	SM00823	Phosphopantetheine attachment site
MSG_RS24165	SM00825	Beta-ketoacyl synthase
MSG_RS24165	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
MSG_RS24175	SM01110	MSG_RS24175
MSG_RS24200	SM00014	Acid phosphatase homologues
MSG_RS24220	SM00701	Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme.
MSG_RS24230	SM00563	Phosphate acyltransferases
MSG_RS24235	SM00563	Phosphate acyltransferases
MSG_RS24240	SM00563	Phosphate acyltransferases
MSG_RS24295	SM00855	Phosphoglycerate mutase family
MSG_RS24395	SM00481	DNA polymerase alpha chain like domain
MSG_RS24480	SM00382	ATPases associated with a variety of cellular activities
MSG_RS24495	SM00382	ATPases associated with a variety of cellular activities
MSG_RS24585	SM00382	ATPases associated with a variety of cellular activities
MSG_RS24630	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
MSG_RS24670	SM00646	MSG_RS24670
MSG_RS24680	SM00470	ParB-like nuclease domain
MSG_RS24695	SM00393	Putative single-stranded nucleic acids-binding domain
MSG_RS24705	SM01234	MSG_RS24705
