locus-tag class description RN05_RS00005 PF00308 Bacterial dnaA protein RN05_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix RN05_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain RN05_RS00010 PF02767 DNA polymerase III beta subunit, central domain RN05_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain RN05_RS00015 PF02463 RecF/RecN/SMC N terminal domain RN05_RS00020 PF05258 Dna[CI] antecedent, DciA RN05_RS00025 PF01751 Toprim domain RN05_RS00025 PF00986 DNA gyrase B subunit, carboxyl terminus RN05_RS00025 PF00204 DNA gyrase B RN05_RS00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RN05_RS00030 PF03989 DNA gyrase C-terminal domain, beta-propeller RN05_RS00030 PF00521 DNA gyrase/topoisomerase IV, subunit A RN05_RS00055 PF10814 Cell wall synthesis protein CwsA RN05_RS00060 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RN05_RS00065 PF10756 Bacterial PH domain RN05_RS00070 PF06781 Cell division protein CrgA RN05_RS00080 PF00117 Glutamine amidotransferase class-I RN05_RS00085 PF03793 PASTA domain RN05_RS00085 PF00069 Protein kinase domain RN05_RS00095 PF00905 Penicillin binding protein transpeptidase domain RN05_RS00100 PF01098 Cell cycle protein RN05_RS00110 PF16697 Inner membrane component of T3SS, cytoplasmic domain RN05_RS00115 PF12401 Protein of unknown function (DUF2662) RN05_RS00115 PF00498 FHA domain RN05_RS00125 PF03060 Nitronate monooxygenase RN05_RS00130 PF02467 Transcription factor WhiB RN05_RS00135 PF01381 Helix-turn-helix RN05_RS00140 PF00877 NlpC/P60 family RN05_RS00145 PF10774 Domain of unknown function (DUF4226) RN05_RS00150 PF10774 Domain of unknown function (DUF4226) RN05_RS00155 PF10824 Excreted virulence factor EspC, type VII ESX diderm RN05_RS00160 PF10904 Protein of unknown function (DUF2694) RN05_RS00165 PF18645 Family of unknown function (DUF5631) RN05_RS00165 PF18646 Family of unknown function (DUF5632) RN05_RS00170 PF10921 Protein of unknown function (DUF2710) RN05_RS00180 PF13480 Acetyltransferase (GNAT) domain RN05_RS00180 PF00155 Aminotransferase class I and II RN05_RS00185 PF00550 Phosphopantetheine attachment site RN05_RS00190 PF12680 SnoaL-like domain RN05_RS00195 PF00501 AMP-binding enzyme RN05_RS00200 PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain RN05_RS00200 PF08608 Wyosine base formation RN05_RS00205 PF07690 Major Facilitator Superfamily RN05_RS00210 PF02622 Uncharacterized ACR, COG1678 RN05_RS00220 PF10738 Probable lipoprotein LpqN RN05_RS00225 PF13603 Leucyl-tRNA synthetase, Domain 2 RN05_RS00225 PF08264 Anticodon-binding domain of tRNA RN05_RS00225 PF09334 tRNA synthetases class I (M) RN05_RS00235 PF00392 Bacterial regulatory proteins, gntR family RN05_RS00240 PF00296 Luciferase-like monooxygenase RN05_RS00245 PF12697 Alpha/beta hydrolase family RN05_RS00250 PF01658 Myo-inositol-1-phosphate synthase RN05_RS00260 PF08044 Domain of unknown function (DUF1707) RN05_RS00265 PF17249 Family of unknown function (DUF5318) RN05_RS00270 PF00912 Transglycosylase RN05_RS00270 PF00905 Penicillin binding protein transpeptidase domain RN05_RS00280 PF01965 DJ-1/PfpI family RN05_RS00285 PF01250 Ribosomal protein S6 RN05_RS00290 PF00436 Single-strand binding protein family RN05_RS00295 PF01084 Ribosomal protein S18 RN05_RS00300 PF03948 Ribosomal protein L9, C-terminal domain RN05_RS00300 PF01281 Ribosomal protein L9, N-terminal domain RN05_RS00310 PF00772 DnaB-like helicase N terminal domain RN05_RS00310 PF03796 DnaB-like helicase C terminal domain RN05_RS00310 PF14528 LAGLIDADG-like domain RN05_RS00335 PF01341 Glycosyl hydrolases family 6 RN05_RS00335 PF00553 Cellulose binding domain RN05_RS00340 PF01565 FAD binding domain RN05_RS00340 PF08031 Berberine and berberine like RN05_RS00345 PF03699 Uncharacterised protein family (UPF0182) RN05_RS00355 PF01850 PIN domain RN05_RS00360 PF03971 Monomeric isocitrate dehydrogenase RN05_RS00365 PF00440 Bacterial regulatory proteins, tetR family RN05_RS00375 PF03313 Serine dehydratase alpha chain RN05_RS00375 PF03315 Serine dehydratase beta chain RN05_RS00380 PF00464 Serine hydroxymethyltransferase RN05_RS00385 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) RN05_RS00395 PF00005 ABC transporter RN05_RS00395 PF00027 Cyclic nucleotide-binding domain RN05_RS00400 PF01979 Amidohydrolase family RN05_RS00405 PF00155 Aminotransferase class I and II RN05_RS00420 PF00440 Bacterial regulatory proteins, tetR family RN05_RS00435 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus RN05_RS00440 PF12900 Pyridoxamine 5'-phosphate oxidase RN05_RS00450 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit RN05_RS00455 PF00361 Proton-conducting membrane transporter RN05_RS00460 PF00146 NADH dehydrogenase RN05_RS00470 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus RN05_RS00470 PF00361 Proton-conducting membrane transporter RN05_RS00475 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit RN05_RS00475 PF00374 Nickel-dependent hydrogenase RN05_RS00475 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit RN05_RS00480 PF10604 Polyketide cyclase / dehydrase and lipid transport RN05_RS00485 PF08241 Methyltransferase domain RN05_RS00490 PF09900 Predicted membrane protein (DUF2127) RN05_RS00495 PF01048 Phosphorylase superfamily RN05_RS00500 PF00403 Heavy-metal-associated domain RN05_RS00505 PF13490 Putative zinc-finger RN05_RS00510 PF01844 HNH endonuclease RN05_RS00510 PF02720 Domain of unknown function (DUF222) RN05_RS00515 PF02720 Domain of unknown function (DUF222) RN05_RS00520 PF00823 PPE family RN05_RS00525 PF02668 Taurine catabolism dioxygenase TauD, TfdA family RN05_RS00530 PF10862 FcoT-like thioesterase domain RN05_RS00535 PF00501 AMP-binding enzyme RN05_RS00535 PF13193 AMP-binding enzyme C-terminal domain RN05_RS00540 PF00550 Phosphopantetheine attachment site RN05_RS00545 PF00550 Phosphopantetheine attachment site RN05_RS00545 PF00668 Condensation domain RN05_RS00545 PF13193 AMP-binding enzyme C-terminal domain RN05_RS00545 PF00975 Thioesterase domain RN05_RS00545 PF00501 AMP-binding enzyme RN05_RS00550 PF05425 Copper resistance protein D RN05_RS00550 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) RN05_RS00555 PF00403 Heavy-metal-associated domain RN05_RS00560 PF00027 Cyclic nucleotide-binding domain RN05_RS00565 PF00830 Ribosomal L28 family RN05_RS00570 PF07683 Cobalamin synthesis protein cobW C-terminal domain RN05_RS00570 PF02492 CobW/HypB/UreG, nucleotide-binding domain RN05_RS00575 PF00689 Cation transporting ATPase, C-terminus RN05_RS00585 PF00934 PE family RN05_RS00595 PF01757 Acyltransferase family RN05_RS00600 PF16363 GDP-mannose 4,6 dehydratase RN05_RS00605 PF13580 SIS domain RN05_RS00615 PF08544 GHMP kinases C terminal RN05_RS00615 PF00288 GHMP kinases N terminal domain RN05_RS00625 PF17964 Bacterial Ig domain RN05_RS00625 PF03734 L,D-transpeptidase catalytic domain RN05_RS00630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RN05_RS00630 PF03466 LysR substrate binding domain RN05_RS00635 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RN05_RS00635 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RN05_RS00635 PF00205 Thiamine pyrophosphate enzyme, central domain RN05_RS00640 PF13193 AMP-binding enzyme C-terminal domain RN05_RS00640 PF00501 AMP-binding enzyme RN05_RS00645 PF03764 Elongation factor G, domain IV RN05_RS00645 PF00009 Elongation factor Tu GTP binding domain RN05_RS00645 PF00679 Elongation factor G C-terminus RN05_RS00645 PF03144 Elongation factor Tu domain 2 RN05_RS00645 PF14492 Elongation Factor G, domain II RN05_RS00670 PF13180 PDZ domain RN05_RS00675 PF16657 Maltogenic Amylase, C-terminal domain RN05_RS00675 PF00128 Alpha amylase, catalytic domain RN05_RS00680 PF18085 Maltokinase N-terminal cap domain RN05_RS00690 PF00756 Putative esterase RN05_RS00695 PF01575 MaoC like domain RN05_RS00700 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RN05_RS00700 PF02770 Acyl-CoA dehydrogenase, middle domain RN05_RS00700 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RN05_RS00705 PF00296 Luciferase-like monooxygenase RN05_RS00710 PF00583 Acetyltransferase (GNAT) family RN05_RS00715 PF00561 alpha/beta hydrolase fold RN05_RS00725 PF00067 Cytochrome P450 RN05_RS00730 PF01625 Peptide methionine sulfoxide reductase RN05_RS00760 PF00654 Voltage gated chloride channel RN05_RS00765 PF00440 Bacterial regulatory proteins, tetR family RN05_RS00770 PF04072 Leucine carboxyl methyltransferase RN05_RS00775 PF04072 Leucine carboxyl methyltransferase RN05_RS00780 PF00171 Aldehyde dehydrogenase family RN05_RS00785 PF00106 short chain dehydrogenase RN05_RS00790 PF02801 Beta-ketoacyl synthase, C-terminal domain RN05_RS00790 PF00550 Phosphopantetheine attachment site RN05_RS00790 PF14765 Polyketide synthase dehydratase RN05_RS00790 PF00109 Beta-ketoacyl synthase, N-terminal domain RN05_RS00790 PF08659 KR domain RN05_RS00790 PF00698 Acyl transferase domain RN05_RS00790 PF16197 Ketoacyl-synthetase C-terminal extension RN05_RS00790 PF00107 Zinc-binding dehydrogenase RN05_RS00790 PF08240 Alcohol dehydrogenase GroES-like domain RN05_RS00795 PF08237 PE-PPE domain RN05_RS00795 PF00823 PPE family RN05_RS00800 PF08237 PE-PPE domain RN05_RS00800 PF00823 PPE family RN05_RS00805 PF00823 PPE family RN05_RS00805 PF08237 PE-PPE domain RN05_RS00810 PF13350 Tyrosine phosphatase family RN05_RS00815 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RN05_RS00815 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RN05_RS00815 PF02770 Acyl-CoA dehydrogenase, middle domain RN05_RS00825 PF01262 Alanine dehydrogenase/PNT, C-terminal domain RN05_RS00825 PF05222 Alanine dehydrogenase/PNT, N-terminal domain RN05_RS00830 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch RN05_RS00830 PF05222 Alanine dehydrogenase/PNT, N-terminal domain RN05_RS00830 PF01262 Alanine dehydrogenase/PNT, C-terminal domain RN05_RS00835 PF02233 NAD(P) transhydrogenase beta subunit RN05_RS00845 PF00440 Bacterial regulatory proteins, tetR family RN05_RS00845 PF08362 YcdC-like protein, C-terminal region RN05_RS00850 PF00934 PE family RN05_RS00850 PF08237 PE-PPE domain RN05_RS00855 PF00934 PE family RN05_RS00855 PF08237 PE-PPE domain RN05_RS00860 PF01565 FAD binding domain RN05_RS00860 PF02913 FAD linked oxidases, C-terminal domain RN05_RS00865 PF08240 Alcohol dehydrogenase GroES-like domain RN05_RS00865 PF00107 Zinc-binding dehydrogenase RN05_RS00880 PF07729 FCD domain RN05_RS00880 PF00392 Bacterial regulatory proteins, gntR family RN05_RS00885 PF00501 AMP-binding enzyme RN05_RS00885 PF13193 AMP-binding enzyme C-terminal domain RN05_RS00890 PF02405 Permease MlaE RN05_RS00895 PF02405 Permease MlaE RN05_RS00920 PF02470 MlaD protein RN05_RS00935 PF06271 RDD family RN05_RS00960 PF17954 Quercetinase C-terminal cupin domain RN05_RS00960 PF02678 Pirin RN05_RS00965 PF12680 SnoaL-like domain RN05_RS00965 PF08281 Sigma-70, region 4 RN05_RS00965 PF04542 Sigma-70 region 2 RN05_RS00970 PF12146 Serine aminopeptidase, S33 RN05_RS00985 PF01915 Glycosyl hydrolase family 3 C-terminal domain RN05_RS00985 PF00933 Glycosyl hydrolase family 3 N terminal domain RN05_RS00985 PF14310 Fibronectin type III-like domain RN05_RS00995 PF01596 O-methyltransferase RN05_RS01005 PF00920 Dehydratase family RN05_RS01010 PF02583 Metal-sensitive transcriptional repressor RN05_RS01015 PF07690 Major Facilitator Superfamily RN05_RS01020 PF17964 Bacterial Ig domain RN05_RS01020 PF03734 L,D-transpeptidase catalytic domain RN05_RS01030 PF00664 ABC transporter transmembrane region RN05_RS01030 PF00005 ABC transporter RN05_RS01040 PF00440 Bacterial regulatory proteins, tetR family RN05_RS01045 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RN05_RS01045 PF10518 TAT (twin-arginine translocation) pathway signal sequence RN05_RS01045 PF00384 Molybdopterin oxidoreductase RN05_RS01045 PF01568 Molydopterin dinucleotide binding domain RN05_RS01050 PF01431 Peptidase family M13 RN05_RS01050 PF05649 Peptidase family M13 RN05_RS01075 PF16525 Haemophore, haem-binding RN05_RS01085 PF01594 AI-2E family transporter RN05_RS01090 PF03176 MMPL family RN05_RS01100 PF02390 Putative methyltransferase RN05_RS01115 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain RN05_RS01115 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain RN05_RS01130 PF13193 AMP-binding enzyme C-terminal domain RN05_RS01130 PF00501 AMP-binding enzyme RN05_RS01145 PF07859 alpha/beta hydrolase fold RN05_RS01150 PF00174 Oxidoreductase molybdopterin binding domain RN05_RS01160 PF07859 alpha/beta hydrolase fold RN05_RS01165 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain RN05_RS01165 PF06974 Protein of unknown function (DUF1298) RN05_RS01170 PF00378 Enoyl-CoA hydratase/isomerase RN05_RS01175 PF00171 Aldehyde dehydrogenase family RN05_RS01180 PF08241 Methyltransferase domain RN05_RS01185 PF00534 Glycosyl transferases group 1 RN05_RS01185 PF08323 Starch synthase catalytic domain RN05_RS01205 PF01850 PIN domain RN05_RS01215 PF02126 Phosphotriesterase family RN05_RS01225 PF17754 MftR C-terminal domain RN05_RS01225 PF00440 Bacterial regulatory proteins, tetR family RN05_RS01230 PF00268 Ribonucleotide reductase, small chain RN05_RS01235 PF00171 Aldehyde dehydrogenase family RN05_RS01245 PF11847 Alpha-(1->3)-arabinofuranosyltransferase RN05_RS01250 PF11021 Protein of unknown function (DUF2613) RN05_RS01255 PF00933 Glycosyl hydrolase family 3 N terminal domain RN05_RS01270 PF01850 PIN domain RN05_RS01275 PF01575 MaoC like domain RN05_RS01285 PF02803 Thiolase, C-terminal domain RN05_RS01285 PF00108 Thiolase, N-terminal domain RN05_RS01290 PF12806 Acetyl-CoA dehydrogenase C-terminal like RN05_RS01290 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RN05_RS01290 PF02770 Acyl-CoA dehydrogenase, middle domain RN05_RS01290 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RN05_RS01295 PF01613 Flavin reductase like domain RN05_RS01305 PF13183 4Fe-4S dicluster domain RN05_RS01305 PF13085 2Fe-2S iron-sulfur cluster binding domain RN05_RS01310 PF02910 Fumarate reductase flavoprotein C-term RN05_RS01310 PF00890 FAD binding domain RN05_RS01330 PF04324 BFD-like [2Fe-2S] binding domain RN05_RS01330 PF18267 Rubredoxin NAD+ reductase C-terminal domain RN05_RS01330 PF07992 Pyridine nucleotide-disulphide oxidoreductase RN05_RS01330 PF13806 Rieske-like [2Fe-2S] domain RN05_RS01330 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain RN05_RS01330 PF01077 Nitrite and sulphite reductase 4Fe-4S domain RN05_RS01340 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase RN05_RS01345 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RN05_RS01345 PF07685 CobB/CobQ-like glutamine amidotransferase domain RN05_RS01375 PF07690 Major Facilitator Superfamily RN05_RS01385 PF02626 Carboxyltransferase domain, subdomain A and B RN05_RS01400 PF01968 Hydantoinase/oxoprolinase RN05_RS01400 PF05378 Hydantoinase/oxoprolinase N-terminal region RN05_RS01405 PF07690 Major Facilitator Superfamily RN05_RS01410 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system RN05_RS01420 PF13193 AMP-binding enzyme C-terminal domain RN05_RS01420 PF00501 AMP-binding enzyme RN05_RS01425 PF02770 Acyl-CoA dehydrogenase, middle domain RN05_RS01425 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RN05_RS01425 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RN05_RS01440 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RN05_RS01450 PF09995 Uncharacterized protein conserved in bacteria (DUF2236) RN05_RS01455 PF01850 PIN domain RN05_RS01460 PF01402 Ribbon-helix-helix protein, copG family RN05_RS01475 PF00823 PPE family RN05_RS01480 PF04072 Leucine carboxyl methyltransferase RN05_RS01485 PF00004 ATPase family associated with various cellular activities (AAA) RN05_RS01485 PF17866 AAA lid domain RN05_RS01490 PF05108 Type VII secretion system ESX-1, transport TM domain B RN05_RS01495 PF01580 FtsK/SpoIIIE family RN05_RS01500 PF00934 PE family RN05_RS01505 PF00823 PPE family RN05_RS01510 PF06013 Proteins of 100 residues with WXG RN05_RS01515 PF06013 Proteins of 100 residues with WXG RN05_RS01520 PF14011 EspG family RN05_RS01525 PF08817 WXG100 protein secretion system (Wss), protein YukD RN05_RS01530 PF00082 Subtilase family RN05_RS01535 PF11203 Putative type VII ESX secretion system translocon, EccE RN05_RS01550 PF09037 Stf0 sulphotransferase RN05_RS01555 PF00884 Sulfatase RN05_RS01560 PF00934 PE family RN05_RS01565 PF01402 Ribbon-helix-helix protein, copG family RN05_RS01575 PF01402 Ribbon-helix-helix protein, copG family RN05_RS01580 PF01850 PIN domain RN05_RS01590 PF00106 short chain dehydrogenase RN05_RS01600 PF08237 PE-PPE domain RN05_RS01600 PF00823 PPE family RN05_RS01605 PF00881 Nitroreductase family RN05_RS01615 PF01569 PAP2 superfamily RN05_RS01625 PF13577 SnoaL-like domain RN05_RS01655 PF02426 Muconolactone delta-isomerase RN05_RS01660 PF03009 Glycerophosphoryl diester phosphodiesterase family RN05_RS01675 PF01470 Pyroglutamyl peptidase RN05_RS01685 PF00692 dUTPase RN05_RS01690 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain RN05_RS01690 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain RN05_RS01690 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain RN05_RS01695 PF02585 GlcNAc-PI de-N-acetylase RN05_RS01700 PF01022 Bacterial regulatory protein, arsR family RN05_RS01710 PF08241 Methyltransferase domain RN05_RS01715 PF00067 Cytochrome P450 RN05_RS01725 PF01209 ubiE/COQ5 methyltransferase family RN05_RS01735 PF07992 Pyridine nucleotide-disulphide oxidoreductase RN05_RS01750 PF00483 Nucleotidyl transferase RN05_RS01755 PF00934 PE family RN05_RS01760 PF02720 Domain of unknown function (DUF222) RN05_RS01765 PF00155 Aminotransferase class I and II RN05_RS01770 PF02665 Nitrate reductase gamma subunit RN05_RS01770 PF13183 4Fe-4S dicluster domain RN05_RS01770 PF02754 Cysteine-rich domain RN05_RS01790 PF00350 Dynamin family RN05_RS01795 PF00350 Dynamin family RN05_RS01810 PF00324 Amino acid permease RN05_RS01830 PF00012 Hsp70 protein RN05_RS01835 PF01025 GrpE RN05_RS01840 PF00226 DnaJ domain RN05_RS01840 PF01556 DnaJ C terminal domain RN05_RS01840 PF00684 DnaJ central domain RN05_RS01845 PF13411 MerR HTH family regulatory protein RN05_RS01860 PF00709 Adenylosuccinate synthetase RN05_RS01885 PF01769 Divalent cation transporter RN05_RS01885 PF00571 CBS domain RN05_RS01885 PF03448 MgtE intracellular N domain RN05_RS01890 PF01116 Fructose-bisphosphate aldolase class-II RN05_RS01895 PF09335 SNARE associated Golgi protein RN05_RS01930 PF12804 MobA-like NTP transferase domain RN05_RS01940 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RN05_RS01940 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RN05_RS01945 PF01799 [2Fe-2S] binding domain RN05_RS01945 PF00111 2Fe-2S iron-sulfur cluster binding domain RN05_RS01950 PF00941 FAD binding domain in molybdopterin dehydrogenase RN05_RS01950 PF03450 CO dehydrogenase flavoprotein C-terminal domain RN05_RS01960 PF03466 LysR substrate binding domain RN05_RS01960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RN05_RS01970 PF07311 Dodecin RN05_RS01985 PF00156 Phosphoribosyl transferase domain RN05_RS01995 PF07724 AAA domain (Cdc48 subfamily) RN05_RS01995 PF17871 AAA lid domain RN05_RS01995 PF10431 C-terminal, D2-small domain, of ClpB protein RN05_RS01995 PF00004 ATPase family associated with various cellular activities (AAA) RN05_RS01995 PF02861 Clp amino terminal domain, pathogenicity island component RN05_RS02000 PF00970 Oxidoreductase FAD-binding domain RN05_RS02000 PF00175 Oxidoreductase NAD-binding domain RN05_RS02000 PF00111 2Fe-2S iron-sulfur cluster binding domain RN05_RS02005 PF00196 Bacterial regulatory proteins, luxR family RN05_RS02010 PF12484 Polymorphic PE/PPE proteins C terminal RN05_RS02010 PF00823 PPE family RN05_RS02015 PF02222 ATP-grasp domain RN05_RS02015 PF01370 NAD dependent epimerase/dehydratase family RN05_RS02025 PF01053 Cys/Met metabolism PLP-dependent enzyme RN05_RS02030 PF07992 Pyridine nucleotide-disulphide oxidoreductase RN05_RS02035 PF02720 Domain of unknown function (DUF222) RN05_RS02075 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RN05_RS02075 PF02770 Acyl-CoA dehydrogenase, middle domain RN05_RS02075 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RN05_RS02085 PF03176 MMPL family RN05_RS02090 PF05423 Mycobacterium membrane protein RN05_RS02095 PF00501 AMP-binding enzyme RN05_RS02105 PF00753 Metallo-beta-lactamase superfamily RN05_RS02110 PF00296 Luciferase-like monooxygenase RN05_RS02115 PF01515 Phosphate acetyl/butaryl transferase RN05_RS02115 PF07085 DRTGG domain RN05_RS02120 PF00871 Acetokinase family RN05_RS02125 PF00069 Protein kinase domain RN05_RS02125 PF16919 Protein kinase G rubredoxin domain RN05_RS02125 PF16918 Protein kinase G tetratricopeptide repeat RN05_RS02130 PF00497 Bacterial extracellular solute-binding proteins, family 3 RN05_RS02140 PF00293 NUDIX domain RN05_RS02145 PF02581 Thiamine monophosphate synthase RN05_RS02150 PF01266 FAD dependent oxidoreductase RN05_RS02160 PF05690 Thiazole biosynthesis protein ThiG RN05_RS02165 PF04389 Peptidase family M28 RN05_RS02165 PF02225 PA domain RN05_RS02185 PF08543 Phosphomethylpyrimidine kinase RN05_RS02190 PF13667 ThiC-associated domain RN05_RS02190 PF01964 Radical SAM ThiC family RN05_RS02200 PF00689 Cation transporting ATPase, C-terminus RN05_RS02220 PF01327 Polypeptide deformylase RN05_RS02235 PF00080 Copper/zinc superoxide dismutase (SODC) RN05_RS02240 PF04107 Glutamate-cysteine ligase family 2(GCS2) RN05_RS02255 PF17862 AAA+ lid domain RN05_RS02255 PF01434 Peptidase family M41 RN05_RS02255 PF00004 ATPase family associated with various cellular activities (AAA) RN05_RS02260 PF01066 CDP-alcohol phosphatidyltransferase RN05_RS02265 PF02666 Phosphatidylserine decarboxylase RN05_RS02270 PF00994 Probable molybdopterin binding domain RN05_RS02270 PF03453 MoeA N-terminal region (domain I and II) RN05_RS02270 PF03454 MoeA C-terminal region (domain IV) RN05_RS02275 PF00106 short chain dehydrogenase RN05_RS02280 PF00118 TCP-1/cpn60 chaperonin family RN05_RS02290 PF01469 Pentapeptide repeats (8 copies) RN05_RS02290 PF00823 PPE family RN05_RS02300 PF10099 Anti-sigma-K factor rskA RN05_RS02305 PF04542 Sigma-70 region 2 RN05_RS02305 PF04545 Sigma-70, region 4 RN05_RS02330 PF03176 MMPL family RN05_RS02335 PF05423 Mycobacterium membrane protein RN05_RS02345 PF00823 PPE family RN05_RS02360 PF00378 Enoyl-CoA hydratase/isomerase RN05_RS02365 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system RN05_RS02375 PF00326 Prolyl oligopeptidase family RN05_RS02375 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain RN05_RS02380 PF00171 Aldehyde dehydrogenase family RN05_RS02400 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RN05_RS02400 PF07992 Pyridine nucleotide-disulphide oxidoreductase RN05_RS02415 PF06114 IrrE N-terminal-like domain RN05_RS02415 PF09856 Predicted transcriptional regulator (DUF2083) RN05_RS02415 PF01381 Helix-turn-helix RN05_RS02420 PF01643 Acyl-ACP thioesterase RN05_RS02425 PF00463 Isocitrate lyase family RN05_RS02430 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RN05_RS02430 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RN05_RS02455 PF00440 Bacterial regulatory proteins, tetR family RN05_RS02460 PF04286 Protein of unknown function (DUF445) RN05_RS02465 PF01381 Helix-turn-helix RN05_RS02475 PF10724 Protein of unknown function (DUF2516) RN05_RS02480 PF10783 Protein of unknown function (DUF2599) RN05_RS02485 PF01791 DeoC/LacD family aldolase RN05_RS02490 PF11209 Protein of unknown function (DUF2993) RN05_RS02495 PF00795 Carbon-nitrogen hydrolase RN05_RS02500 PF10698 Protein of unknown function (DUF2505) RN05_RS02505 PF01565 FAD binding domain RN05_RS02505 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain RN05_RS02510 PF03734 L,D-transpeptidase catalytic domain RN05_RS02510 PF17964 Bacterial Ig domain RN05_RS02515 PF00106 short chain dehydrogenase RN05_RS02520 PF00480 ROK family RN05_RS02525 PF00534 Glycosyl transferases group 1 RN05_RS02525 PF13439 Glycosyltransferase Family 4 RN05_RS02530 PF10722 Putative bacterial sensory transduction regulator RN05_RS02535 PF01810 LysE type translocator RN05_RS02540 PF00300 Histidine phosphatase superfamily (branch 1) RN05_RS02545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RN05_RS02545 PF00512 His Kinase A (phospho-acceptor) domain RN05_RS02550 PF00072 Response regulator receiver domain RN05_RS02550 PF00486 Transcriptional regulatory protein, C terminal RN05_RS02555 PF05199 GMC oxidoreductase RN05_RS02555 PF00732 GMC oxidoreductase RN05_RS02570 PF00392 Bacterial regulatory proteins, gntR family RN05_RS02570 PF07729 FCD domain RN05_RS02580 PF02541 Ppx/GppA phosphatase family RN05_RS02590 PF01261 Xylose isomerase-like TIM barrel RN05_RS02600 PF14748 Pyrroline-5-carboxylate reductase dimerisation RN05_RS02600 PF03807 NADP oxidoreductase coenzyme F420-dependent RN05_RS02605 PF12728 Helix-turn-helix domain RN05_RS02610 PF08213 Mitochondrial domain of unknown function (DUF1713) RN05_RS02615 PF01370 NAD dependent epimerase/dehydratase family RN05_RS02620 PF01553 Acyltransferase RN05_RS02630 PF13452 N-terminal half of MaoC dehydratase RN05_RS02640 PF05423 Mycobacterium membrane protein RN05_RS02645 PF03176 MMPL family RN05_RS02650 PF05768 Glutaredoxin-like domain (DUF836) RN05_RS02655 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain RN05_RS02655 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain RN05_RS02655 PF01488 Shikimate / quinate 5-dehydrogenase RN05_RS02660 PF03900 Porphobilinogen deaminase, C-terminal domain RN05_RS02660 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain RN05_RS02665 PF10414 Sirohaem synthase dimerisation region RN05_RS02665 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RN05_RS02665 PF14824 Sirohaem biosynthesis protein central RN05_RS02670 PF00490 Delta-aminolevulinic acid dehydratase RN05_RS02685 PF02720 Domain of unknown function (DUF222) RN05_RS02690 PF01740 STAS domain RN05_RS02695 PF01757 Acyltransferase family RN05_RS02700 PF13472 GDSL-like Lipase/Acylhydrolase family RN05_RS02710 PF08241 Methyltransferase domain RN05_RS02715 PF08241 Methyltransferase domain RN05_RS02720 PF00324 Amino acid permease RN05_RS02730 PF00202 Aminotransferase class-III RN05_RS02735 PF00300 Histidine phosphatase superfamily (branch 1) RN05_RS02745 PF02683 Cytochrome C biogenesis protein transmembrane region RN05_RS02755 PF01578 Cytochrome C assembly protein RN05_RS02760 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RN05_RS02775 PF00934 PE family RN05_RS02780 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal RN05_RS02780 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RN05_RS02785 PF01040 UbiA prenyltransferase family RN05_RS02790 PF01048 Phosphorylase superfamily RN05_RS02795 PF01370 NAD dependent epimerase/dehydratase family RN05_RS02810 PF00535 Glycosyl transferase family 2 RN05_RS02825 PF13193 AMP-binding enzyme C-terminal domain RN05_RS02825 PF00501 AMP-binding enzyme RN05_RS02840 PF01384 Phosphate transporter family RN05_RS02850 PF00106 short chain dehydrogenase RN05_RS02855 PF00378 Enoyl-CoA hydratase/isomerase RN05_RS02860 PF01850 PIN domain RN05_RS02865 PF07362 Post-segregation antitoxin CcdA RN05_RS02870 PF00501 AMP-binding enzyme RN05_RS02870 PF13193 AMP-binding enzyme C-terminal domain RN05_RS02875 PF01979 Amidohydrolase family RN05_RS02880 PF18374 Enolase N-terminal domain-like RN05_RS02880 PF13378 Enolase C-terminal domain-like RN05_RS02885 PF12697 Alpha/beta hydrolase family RN05_RS02890 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RN05_RS02900 PF13439 Glycosyltransferase Family 4 RN05_RS02900 PF00534 Glycosyl transferases group 1 RN05_RS02905 PF01209 ubiE/COQ5 methyltransferase family RN05_RS02910 PF05305 Protein of unknown function (DUF732) RN05_RS02915 PF13847 Methyltransferase domain RN05_RS02920 PF01494 FAD binding domain RN05_RS02925 PF00348 Polyprenyl synthetase RN05_RS02930 PF01435 Peptidase family M48 RN05_RS02935 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus RN05_RS02935 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus RN05_RS02940 PF00743 Flavin-binding monooxygenase-like RN05_RS02945 PF04461 Protein of unknown function (DUF520) RN05_RS02955 PF00891 O-methyltransferase domain RN05_RS02955 PF16864 Dimerisation domain RN05_RS02960 PF00067 Cytochrome P450 RN05_RS02965 PF08940 Domain of unknown function (DUF1918) RN05_RS02970 PF00317 Ribonucleotide reductase, all-alpha domain RN05_RS02970 PF02867 Ribonucleotide reductase, barrel domain RN05_RS02970 PF03477 ATP cone domain RN05_RS02975 PF00156 Phosphoribosyl transferase domain RN05_RS02975 PF01738 Dienelactone hydrolase family RN05_RS02985 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family RN05_RS02985 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain RN05_RS02990 PF09587 Bacterial capsule synthesis protein PGA_cap RN05_RS02995 PF01494 FAD binding domain RN05_RS03000 PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain RN05_RS03005 PF18029 Glyoxalase-like domain RN05_RS03005 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RN05_RS03010 PF00934 PE family RN05_RS03025 PF01402 Ribbon-helix-helix protein, copG family RN05_RS03030 PF01850 PIN domain RN05_RS03035 PF10738 Probable lipoprotein LpqN RN05_RS03050 PF00392 Bacterial regulatory proteins, gntR family RN05_RS03050 PF07729 FCD domain RN05_RS03060 PF02405 Permease MlaE RN05_RS03085 PF02470 MlaD protein RN05_RS03095 PF01850 PIN domain RN05_RS03100 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system RN05_RS03110 PF01850 PIN domain RN05_RS03115 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin RN05_RS03120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RN05_RS03125 PF00672 HAMP domain RN05_RS03130 PF00486 Transcriptional regulatory protein, C terminal RN05_RS03130 PF00072 Response regulator receiver domain RN05_RS03145 PF00239 Resolvase, N terminal domain RN05_RS03150 PF01385 Probable transposase RN05_RS03150 PF07282 Putative transposase DNA-binding domain RN05_RS03150 PF12323 Helix-turn-helix domain RN05_RS03160 PF07704 Rv0623-like transcription factor RN05_RS03165 PF01850 PIN domain RN05_RS03195 PF02810 SEC-C motif RN05_RS03195 PF07516 SecA Wing and Scaffold domain RN05_RS03195 PF01043 SecA preprotein cross-linking domain RN05_RS03195 PF07517 SecA DEAD-like domain RN05_RS03220 PF01850 PIN domain RN05_RS03230 PF00288 GHMP kinases N terminal domain RN05_RS03230 PF08544 GHMP kinases C terminal RN05_RS03230 PF10509 Galactokinase galactose-binding signature RN05_RS03250 PF07704 Rv0623-like transcription factor RN05_RS03255 PF01850 PIN domain RN05_RS03260 PF09335 SNARE associated Golgi protein RN05_RS03265 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system RN05_RS03270 PF01850 PIN domain RN05_RS03280 PF13538 UvrD-like helicase C-terminal domain RN05_RS03285 PF12705 PD-(D/E)XK nuclease superfamily RN05_RS03285 PF13361 UvrD-like helicase C-terminal domain RN05_RS03285 PF00580 UvrD/REP helicase N-terminal domain RN05_RS03290 PF17946 RecC C-terminal domain RN05_RS03295 PF00378 Enoyl-CoA hydratase/isomerase RN05_RS03305 PF00753 Metallo-beta-lactamase superfamily RN05_RS03310 PF09957 Bacterial antitoxin of type II TA system, VapB RN05_RS03325 PF00471 Ribosomal protein L33 RN05_RS03330 PF13452 N-terminal half of MaoC dehydratase RN05_RS03335 PF01575 MaoC like domain RN05_RS03340 PF13452 N-terminal half of MaoC dehydratase RN05_RS03350 PF00584 SecE/Sec61-gamma subunits of protein translocation complex RN05_RS03355 PF02357 Transcription termination factor nusG RN05_RS03360 PF00298 Ribosomal protein L11, RNA binding domain RN05_RS03360 PF03946 Ribosomal protein L11, N-terminal domain RN05_RS03365 PF00687 Ribosomal protein L1p/L10e family RN05_RS03390 PF00561 alpha/beta hydrolase fold RN05_RS03395 PF03109 ABC1 family RN05_RS03410 PF00480 ROK family RN05_RS03415 PF00466 Ribosomal protein L10 RN05_RS03420 PF16320 Ribosomal protein L7/L12 dimerisation domain RN05_RS03420 PF00542 Ribosomal protein L7/L12 C-terminal domain RN05_RS03425 PF00440 Bacterial regulatory proteins, tetR family RN05_RS03425 PF13305 Tetracyclin repressor-like, C-terminal domain RN05_RS03430 PF03055 Retinal pigment epithelial membrane protein RN05_RS03435 PF00005 ABC transporter RN05_RS03445 PF09957 Bacterial antitoxin of type II TA system, VapB RN05_RS03455 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system RN05_RS03460 PF01402 Ribbon-helix-helix protein, copG family RN05_RS03465 PF01850 PIN domain RN05_RS03475 PF00884 Sulfatase RN05_RS03485 PF01850 PIN domain RN05_RS03495 PF00562 RNA polymerase Rpb2, domain 6 RN05_RS03495 PF10385 RNA polymerase beta subunit external 1 domain RN05_RS03495 PF04560 RNA polymerase Rpb2, domain 7 RN05_RS03495 PF04561 RNA polymerase Rpb2, domain 2 RN05_RS03495 PF04563 RNA polymerase beta subunit RN05_RS03495 PF04565 RNA polymerase Rpb2, domain 3 RN05_RS03500 PF05000 RNA polymerase Rpb1, domain 4 RN05_RS03500 PF04983 RNA polymerase Rpb1, domain 3 RN05_RS03500 PF00623 RNA polymerase Rpb1, domain 2 RN05_RS03500 PF04998 RNA polymerase Rpb1, domain 5 RN05_RS03500 PF04997 RNA polymerase Rpb1, domain 1 RN05_RS03510 PF04734 Neutral/alkaline non-lysosomal ceramidase, N-terminal RN05_RS03510 PF17048 Neutral/alkaline non-lysosomal ceramidase, C-terminal RN05_RS03515 PF01261 Xylose isomerase-like TIM barrel RN05_RS03520 PF10503 Esterase PHB depolymerase RN05_RS03525 PF18158 Adaptive response protein AidB N-terminal domain RN05_RS03525 PF02770 Acyl-CoA dehydrogenase, middle domain RN05_RS03525 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RN05_RS03530 PF00378 Enoyl-CoA hydratase/isomerase RN05_RS03540 PF00378 Enoyl-CoA hydratase/isomerase RN05_RS03545 PF03176 MMPL family RN05_RS03550 PF05423 Mycobacterium membrane protein RN05_RS03570 PF00440 Bacterial regulatory proteins, tetR family RN05_RS03570 PF13305 Tetracyclin repressor-like, C-terminal domain RN05_RS03575 PF00164 Ribosomal protein S12/S23 RN05_RS03580 PF00177 Ribosomal protein S7p/S5e RN05_RS03585 PF03764 Elongation factor G, domain IV RN05_RS03585 PF00009 Elongation factor Tu GTP binding domain RN05_RS03585 PF03144 Elongation factor Tu domain 2 RN05_RS03585 PF00679 Elongation factor G C-terminus RN05_RS03585 PF14492 Elongation Factor G, domain II RN05_RS03590 PF03144 Elongation factor Tu domain 2 RN05_RS03590 PF00009 Elongation factor Tu GTP binding domain RN05_RS03590 PF03143 Elongation factor Tu C-terminal domain RN05_RS03605 PF14759 Reductase C-terminal RN05_RS03605 PF07992 Pyridine nucleotide-disulphide oxidoreductase RN05_RS03620 PF00440 Bacterial regulatory proteins, tetR family RN05_RS03620 PF17754 MftR C-terminal domain RN05_RS03635 PF04055 Radical SAM superfamily RN05_RS03635 PF13186 Iron-sulfur cluster-binding domain RN05_RS03640 PF01070 FMN-dependent dehydrogenase RN05_RS03645 PF02633 Creatinine amidohydrolase RN05_RS03650 PF00535 Glycosyl transferase family 2 RN05_RS03655 PF05199 GMC oxidoreductase RN05_RS03655 PF00732 GMC oxidoreductase RN05_RS03675 PF00338 Ribosomal protein S10p/S20e RN05_RS03680 PF00297 Ribosomal protein L3 RN05_RS03685 PF00573 Ribosomal protein L4/L1 family RN05_RS03690 PF00276 Ribosomal protein L23 RN05_RS03695 PF00181 Ribosomal Proteins L2, RNA binding domain RN05_RS03695 PF03947 Ribosomal Proteins L2, C-terminal domain RN05_RS03700 PF00203 Ribosomal protein S19 RN05_RS03705 PF00237 Ribosomal protein L22p/L17e RN05_RS03710 PF00189 Ribosomal protein S3, C-terminal domain RN05_RS03710 PF07650 KH domain RN05_RS03715 PF00252 Ribosomal protein L16p/L10e RN05_RS03720 PF00831 Ribosomal L29 protein RN05_RS03725 PF00366 Ribosomal protein S17 RN05_RS03730 PF00884 Sulfatase RN05_RS03735 PF03781 Sulfatase-modifying factor enzyme 1 RN05_RS03745 PF00238 Ribosomal protein L14p/L23e RN05_RS03750 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 RN05_RS03750 PF00467 KOW motif RN05_RS03755 PF00673 ribosomal L5P family C-terminus RN05_RS03755 PF00281 Ribosomal protein L5 RN05_RS03760 PF00253 Ribosomal protein S14p/S29e RN05_RS03765 PF00410 Ribosomal protein S8 RN05_RS03770 PF00347 Ribosomal protein L6 RN05_RS03775 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast RN05_RS03780 PF03719 Ribosomal protein S5, C-terminal domain RN05_RS03780 PF00333 Ribosomal protein S5, N-terminal domain RN05_RS03785 PF00327 Ribosomal protein L30p/L7e RN05_RS03790 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A RN05_RS03795 PF01343 Peptidase family S49 RN05_RS03800 PF04072 Leucine carboxyl methyltransferase RN05_RS03805 PF04072 Leucine carboxyl methyltransferase RN05_RS03810 PF00596 Class II Aldolase and Adducin N-terminal domain RN05_RS03815 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RN05_RS03815 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RN05_RS03820 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RN05_RS03820 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RN05_RS03830 PF04072 Leucine carboxyl methyltransferase RN05_RS03835 PF00344 SecY translocase RN05_RS03845 PF00557 Metallopeptidase family M24 RN05_RS03850 PF04542 Sigma-70 region 2 RN05_RS03850 PF04545 Sigma-70, region 4 RN05_RS03855 PF13490 Putative zinc-finger RN05_RS03865 PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain RN05_RS03870 PF10774 Domain of unknown function (DUF4226) RN05_RS03880 PF13542 Helix-turn-helix domain of transposase family ISL3 RN05_RS03880 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 RN05_RS03880 PF01610 Transposase RN05_RS03885 PF00934 PE family RN05_RS03900 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RN05_RS03900 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RN05_RS03920 PF01402 Ribbon-helix-helix protein, copG family RN05_RS03925 PF01850 PIN domain RN05_RS03940 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RN05_RS03940 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RN05_RS03945 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RN05_RS03945 PF02770 Acyl-CoA dehydrogenase, middle domain RN05_RS03945 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RN05_RS03950 PF00171 Aldehyde dehydrogenase family RN05_RS03955 PF00300 Histidine phosphatase superfamily (branch 1) RN05_RS03955 PF00934 PE family RN05_RS03960 PF01469 Pentapeptide repeats (8 copies) RN05_RS03960 PF00823 PPE family RN05_RS03980 PF00072 Response regulator receiver domain RN05_RS03980 PF00486 Transcriptional regulatory protein, C terminal RN05_RS03985 PF00512 His Kinase A (phospho-acceptor) domain RN05_RS03985 PF00672 HAMP domain RN05_RS03985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RN05_RS03990 PF01230 HIT domain RN05_RS04000 PF08240 Alcohol dehydrogenase GroES-like domain RN05_RS04000 PF00107 Zinc-binding dehydrogenase RN05_RS04015 PF00067 Cytochrome P450 RN05_RS04025 PF00067 Cytochrome P450 RN05_RS04030 PF00440 Bacterial regulatory proteins, tetR family RN05_RS04035 PF00171 Aldehyde dehydrogenase family RN05_RS04045 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RN05_RS04045 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RN05_RS04055 PF02843 Phosphoribosylglycinamide synthetase, C domain RN05_RS04055 PF02844 Phosphoribosylglycinamide synthetase, N domain RN05_RS04055 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain RN05_RS04080 PF00206 Lyase RN05_RS04080 PF10397 Adenylosuccinate lyase C-terminus RN05_RS04085 PF00067 Cytochrome P450 RN05_RS04095 PF01259 SAICAR synthetase RN05_RS04100 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain RN05_RS04100 PF00326 Prolyl oligopeptidase family RN05_RS04105 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain RN05_RS04105 PF00326 Prolyl oligopeptidase family RN05_RS04115 PF07690 Major Facilitator Superfamily RN05_RS04125 PF00890 FAD binding domain RN05_RS04140 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase RN05_RS04160 PF00296 Luciferase-like monooxygenase RN05_RS04165 PF00392 Bacterial regulatory proteins, gntR family RN05_RS04165 PF07702 UTRA domain RN05_RS04170 PF03992 Antibiotic biosynthesis monooxygenase RN05_RS04175 PF07992 Pyridine nucleotide-disulphide oxidoreductase RN05_RS04175 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RN05_RS04180 PF01527 Transposase RN05_RS04185 PF00665 Integrase core domain RN05_RS04185 PF13276 HTH-like domain RN05_RS04190 PF02371 Transposase IS116/IS110/IS902 family RN05_RS04190 PF01548 Transposase RN05_RS04195 PF04454 Encapsulating protein for peroxidase RN05_RS04200 PF04261 Dyp-type peroxidase family RN05_RS04205 PF02127 Aminopeptidase I zinc metalloprotease (M18) RN05_RS04215 PF13302 Acetyltransferase (GNAT) domain RN05_RS04220 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain RN05_RS04220 PF00586 AIR synthase related protein, N-terminal domain RN05_RS04220 PF02769 AIR synthase related protein, C-terminal domain RN05_RS04230 PF00149 Calcineurin-like phosphoesterase RN05_RS04235 PF17103 Stealth protein CR4, conserved region 4 RN05_RS04235 PF17102 Stealth protein CR3, conserved region 3 RN05_RS04235 PF11380 Stealth protein CR2, conserved region 2 RN05_RS04235 PF17101 Stealth protein CR1, conserved region 1 RN05_RS04245 PF00156 Phosphoribosyl transferase domain RN05_RS04250 PF00586 AIR synthase related protein, N-terminal domain RN05_RS04250 PF02769 AIR synthase related protein, C-terminal domain RN05_RS04270 PF08768 Domain of unknown function (DUF1794) RN05_RS04275 PF07210 Protein of unknown function (DUF1416) RN05_RS04280 PF00581 Rhodanese-like domain RN05_RS04285 PF00085 Thioredoxin RN05_RS04295 PF00486 Transcriptional regulatory protein, C terminal RN05_RS04300 PF00583 Acetyltransferase (GNAT) family RN05_RS04305 PF00005 ABC transporter RN05_RS04310 PF01895 PhoU domain RN05_RS04320 PF01207 Dihydrouridine synthase (Dus) RN05_RS04325 PF03405 Fatty acid desaturase RN05_RS04340 PF01022 Bacterial regulatory protein, arsR family RN05_RS04345 PF14437 MafB19-like deaminase RN05_RS04350 PF01385 Probable transposase RN05_RS04350 PF07282 Putative transposase DNA-binding domain RN05_RS04350 PF12323 Helix-turn-helix domain RN05_RS04355 PF04072 Leucine carboxyl methyltransferase RN05_RS04385 PF00934 PE family RN05_RS04395 PF00934 PE family RN05_RS04440 PF00561 alpha/beta hydrolase fold RN05_RS04455 PF00676 Dehydrogenase E1 component RN05_RS04460 PF00196 Bacterial regulatory proteins, luxR family RN05_RS04460 PF00072 Response regulator receiver domain RN05_RS04470 PF07732 Multicopper oxidase RN05_RS04470 PF07731 Multicopper oxidase RN05_RS04470 PF00394 Multicopper oxidase RN05_RS04480 PF00291 Pyridoxal-phosphate dependent enzyme RN05_RS04485 PF07690 Major Facilitator Superfamily RN05_RS04495 PF00106 short chain dehydrogenase RN05_RS04505 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RN05_RS04505 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RN05_RS04505 PF00205 Thiamine pyrophosphate enzyme, central domain RN05_RS04515 PF02515 CoA-transferase family III RN05_RS04530 PF00155 Aminotransferase class I and II RN05_RS04535 PF00108 Thiolase, N-terminal domain RN05_RS04535 PF02803 Thiolase, C-terminal domain RN05_RS04540 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RN05_RS04540 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RN05_RS04540 PF00378 Enoyl-CoA hydratase/isomerase RN05_RS04560 PF01967 MoaC family RN05_RS04565 PF00994 Probable molybdopterin binding domain RN05_RS04570 PF02391 MoaE protein RN05_RS04575 PF06737 Transglycosylase-like domain RN05_RS04585 PF06463 Molybdenum Cofactor Synthesis C RN05_RS04585 PF04055 Radical SAM superfamily RN05_RS04590 PF03733 Inner membrane component domain RN05_RS04595 PF00313 'Cold-shock' DNA-binding domain RN05_RS04600 PF00934 PE family RN05_RS04605 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RN05_RS04605 PF02770 Acyl-CoA dehydrogenase, middle domain RN05_RS04605 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RN05_RS04610 PF08495 FIST N domain RN05_RS04610 PF10442 FIST C domain RN05_RS04615 PF10969 Protein of unknown function (DUF2771) RN05_RS04620 PF07690 Major Facilitator Superfamily RN05_RS04625 PF11228 Protein of unknown function (DUF3027) RN05_RS04630 PF00823 PPE family RN05_RS04630 PF01469 Pentapeptide repeats (8 copies) RN05_RS04635 PF10745 Protein of unknown function (DUF2530) RN05_RS04640 PF01047 MarR family RN05_RS04645 PF00588 SpoU rRNA Methylase family RN05_RS04650 PF10801 Protein of unknown function (DUF2537) RN05_RS04655 PF11268 Protein of unknown function (DUF3071) RN05_RS04660 PF00266 Aminotransferase class-V RN05_RS04665 PF11583 P-aminobenzoate N-oxygenase AurF RN05_RS04670 PF07992 Pyridine nucleotide-disulphide oxidoreductase RN05_RS04670 PF00037 4Fe-4S binding domain RN05_RS04675 PF18029 Glyoxalase-like domain RN05_RS04680 PF03372 Endonuclease/Exonuclease/phosphatase family RN05_RS04690 PF00196 Bacterial regulatory proteins, luxR family RN05_RS04695 PF00211 Adenylate and Guanylate cyclase catalytic domain RN05_RS04705 PF00743 Flavin-binding monooxygenase-like RN05_RS04710 PF04072 Leucine carboxyl methyltransferase RN05_RS04720 PF06974 Protein of unknown function (DUF1298) RN05_RS04720 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain RN05_RS04725 PF00285 Citrate synthase, C-terminal domain RN05_RS04735 PF10944 Protein of unknown function (DUF2630) RN05_RS04740 PF00691 OmpA family RN05_RS04740 PF04972 BON domain RN05_RS04755 PF00672 HAMP domain RN05_RS04755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RN05_RS04755 PF00512 His Kinase A (phospho-acceptor) domain RN05_RS04760 PF00072 Response regulator receiver domain RN05_RS04760 PF00486 Transcriptional regulatory protein, C terminal RN05_RS04765 PF01039 Carboxyl transferase domain RN05_RS04770 PF00378 Enoyl-CoA hydratase/isomerase RN05_RS04775 PF12706 Beta-lactamase superfamily domain RN05_RS04790 PF14013 MT0933-like antitoxin protein RN05_RS04795 PF10604 Polyketide cyclase / dehydrase and lipid transport RN05_RS04815 PF03055 Retinal pigment epithelial membrane protein RN05_RS04820 PF02803 Thiolase, C-terminal domain RN05_RS04820 PF00108 Thiolase, N-terminal domain RN05_RS04825 PF00823 PPE family RN05_RS04825 PF12484 Polymorphic PE/PPE proteins C terminal RN05_RS04835 PF02028 BCCT, betaine/carnitine/choline family transporter RN05_RS04860 PF00872 Transposase, Mutator family RN05_RS04865 PF00239 Resolvase, N terminal domain RN05_RS04870 PF12323 Helix-turn-helix domain RN05_RS04870 PF01385 Probable transposase RN05_RS04870 PF07282 Putative transposase DNA-binding domain RN05_RS04880 PF01566 Natural resistance-associated macrophage protein RN05_RS04880 PF03358 NADPH-dependent FMN reductase RN05_RS04885 PF01566 Natural resistance-associated macrophage protein RN05_RS04885 PF03358 NADPH-dependent FMN reductase RN05_RS04900 PF12849 PBP superfamily domain RN05_RS04905 PF00528 Binding-protein-dependent transport system inner membrane component RN05_RS04910 PF00528 Binding-protein-dependent transport system inner membrane component RN05_RS04915 PF08450 SMP-30/Gluconolactonase/LRE-like region RN05_RS04915 PF00069 Protein kinase domain RN05_RS04915 PF01436 NHL repeat RN05_RS04920 PF12849 PBP superfamily domain RN05_RS04925 PF00005 ABC transporter RN05_RS04930 PF12849 PBP superfamily domain RN05_RS04935 PF00528 Binding-protein-dependent transport system inner membrane component RN05_RS04940 PF00528 Binding-protein-dependent transport system inner membrane component RN05_RS04945 PF02735 Ku70/Ku80 beta-barrel domain RN05_RS04950 PF04679 ATP dependent DNA ligase C terminal region RN05_RS04950 PF01068 ATP dependent DNA ligase domain RN05_RS04950 PF13298 DNA polymerase Ligase (LigD) RN05_RS04960 PF00296 Luciferase-like monooxygenase RN05_RS04975 PF16170 Domain of unknown function (DUF4873) RN05_RS04980 PF06827 Zinc finger found in FPG and IleRS RN05_RS04980 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain RN05_RS04985 PF00106 short chain dehydrogenase RN05_RS04990 PF00342 Phosphoglucose isomerase RN05_RS04995 PF00756 Putative esterase RN05_RS05005 PF01817 Chorismate mutase type II RN05_RS05010 PF00580 UvrD/REP helicase N-terminal domain RN05_RS05010 PF13361 UvrD-like helicase C-terminal domain RN05_RS05015 PF01551 Peptidase family M23 RN05_RS05020 PF00549 CoA-ligase RN05_RS05020 PF08442 ATP-grasp domain RN05_RS05025 PF02629 CoA binding domain RN05_RS05025 PF00549 CoA-ligase RN05_RS05030 PF00296 Luciferase-like monooxygenase RN05_RS05035 PF17270 Family of unknown function (DUF5336) RN05_RS05045 PF00551 Formyl transferase RN05_RS05050 PF02142 MGS-like domain RN05_RS05050 PF01808 AICARFT/IMPCHase bienzyme RN05_RS05055 PF13335 Magnesium chelatase, subunit ChlI C-terminal RN05_RS05055 PF01078 Magnesium chelatase, subunit ChlI RN05_RS05070 PF01850 PIN domain RN05_RS05080 PF16708 Lipoprotein confined to pathogenic Mycobacterium RN05_RS05085 PF06259 Alpha/beta hydrolase RN05_RS05100 PF08044 Domain of unknown function (DUF1707) RN05_RS05105 PF02583 Metal-sensitive transcriptional repressor RN05_RS05110 PF07371 Protein of unknown function (DUF1490) RN05_RS05120 PF17197 Domain of unknown function (DUF5134) RN05_RS05125 PF00378 Enoyl-CoA hydratase/isomerase RN05_RS05130 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RN05_RS05130 PF02770 Acyl-CoA dehydrogenase, middle domain RN05_RS05130 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RN05_RS05135 PF02785 Biotin carboxylase C-terminal domain RN05_RS05135 PF00364 Biotin-requiring enzyme RN05_RS05135 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RN05_RS05135 PF00289 Biotin carboxylase, N-terminal domain RN05_RS05140 PF01039 Carboxyl transferase domain RN05_RS05145 PF02770 Acyl-CoA dehydrogenase, middle domain RN05_RS05145 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RN05_RS05145 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RN05_RS05160 PF01436 NHL repeat RN05_RS05160 PF00934 PE family RN05_RS05170 PF01783 Ribosomal L32p protein family RN05_RS05180 PF00486 Transcriptional regulatory protein, C terminal RN05_RS05180 PF00072 Response regulator receiver domain RN05_RS05190 PF13180 PDZ domain RN05_RS05195 PF01967 MoaC family RN05_RS05195 PF00994 Probable molybdopterin binding domain RN05_RS05200 PF01741 Large-conductance mechanosensitive channel, MscL RN05_RS05205 PF00005 ABC transporter RN05_RS05210 PF02687 FtsX-like permease family RN05_RS05210 PF12704 MacB-like periplasmic core domain RN05_RS05220 PF00348 Polyprenyl synthetase RN05_RS05235 PF01812 5-formyltetrahydrofolate cyclo-ligase family RN05_RS05240 PF00483 Nucleotidyl transferase RN05_RS05245 PF03454 MoeA C-terminal region (domain IV) RN05_RS05245 PF00994 Probable molybdopterin binding domain RN05_RS05245 PF03453 MoeA N-terminal region (domain I and II) RN05_RS05280 PF00027 Cyclic nucleotide-binding domain RN05_RS05280 PF13302 Acetyltransferase (GNAT) domain RN05_RS05300 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase RN05_RS05300 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase RN05_RS05305 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RN05_RS05315 PF04715 Anthranilate synthase component I, N terminal region RN05_RS05315 PF00425 chorismate binding enzyme RN05_RS05325 PF09334 tRNA synthetases class I (M) RN05_RS05330 PF01026 TatD related DNase RN05_RS05335 PF06737 Transglycosylase-like domain RN05_RS05335 PF03990 G5-linked-Ubiquitin-like domain RN05_RS05335 PF07501 G5 domain RN05_RS05340 PF00398 Ribosomal RNA adenine dimethylase RN05_RS05345 PF00288 GHMP kinases N terminal domain RN05_RS05345 PF08544 GHMP kinases C terminal RN05_RS05355 PF00501 AMP-binding enzyme RN05_RS05355 PF14535 AMP-binding enzyme C-terminal domain RN05_RS05360 PF01195 Peptidyl-tRNA hydrolase RN05_RS05365 PF01386 Ribosomal L25p family RN05_RS05365 PF14693 Ribosomal protein TL5, C-terminal domain RN05_RS05370 PF10738 Probable lipoprotein LpqN RN05_RS05375 PF14572 Phosphoribosyl synthetase-associated domain RN05_RS05375 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase RN05_RS05380 PF00132 Bacterial transferase hexapeptide (six repeats) RN05_RS05380 PF12804 MobA-like NTP transferase domain RN05_RS05390 PF00440 Bacterial regulatory proteins, tetR family RN05_RS05390 PF18665 Tetracyclin repressor-like, C-terminal domain RN05_RS05395 PF00270 DEAD/DEAH box helicase RN05_RS05395 PF02559 CarD-like/TRCF domain RN05_RS05395 PF03461 TRCF domain RN05_RS05395 PF17757 UvrB interaction domain RN05_RS05395 PF00271 Helicase conserved C-terminal domain RN05_RS05400 PF03819 MazG nucleotide pyrophosphohydrolase domain RN05_RS05410 PF00113 Enolase, C-terminal TIM barrel domain RN05_RS05410 PF03952 Enolase, N-terminal domain RN05_RS05425 PF02541 Ppx/GppA phosphatase family RN05_RS05430 PF00072 Response regulator receiver domain RN05_RS05430 PF00486 Transcriptional regulatory protein, C terminal RN05_RS05435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RN05_RS05435 PF13493 Domain of unknown function (DUF4118) RN05_RS05435 PF00582 Universal stress protein family RN05_RS05435 PF02702 Osmosensitive K+ channel His kinase sensor domain RN05_RS05435 PF00512 His Kinase A (phospho-acceptor) domain RN05_RS05450 PF03814 Potassium-transporting ATPase A subunit RN05_RS05460 PF02669 K+-transporting ATPase, c chain RN05_RS05465 PF00512 His Kinase A (phospho-acceptor) domain RN05_RS05465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RN05_RS05465 PF00672 HAMP domain RN05_RS05470 PF00486 Transcriptional regulatory protein, C terminal RN05_RS05470 PF00072 Response regulator receiver domain RN05_RS05490 PF06013 Proteins of 100 residues with WXG RN05_RS05495 PF06013 Proteins of 100 residues with WXG RN05_RS05500 PF12484 Polymorphic PE/PPE proteins C terminal RN05_RS05500 PF00823 PPE family RN05_RS05505 PF00823 PPE family RN05_RS05505 PF12484 Polymorphic PE/PPE proteins C terminal RN05_RS05510 PF00665 Integrase core domain RN05_RS05510 PF13276 HTH-like domain RN05_RS05515 PF01527 Transposase RN05_RS05520 PF00934 PE family RN05_RS05540 PF18509 Magnetochrome domain RN05_RS05540 PF17820 PDZ domain RN05_RS05560 PF00872 Transposase, Mutator family RN05_RS05630 PF13193 AMP-binding enzyme C-terminal domain RN05_RS05630 PF00501 AMP-binding enzyme RN05_RS05655 PF01734 Patatin-like phospholipase RN05_RS05660 PF17301 Putative lipoprotein LpqV RN05_RS05675 PF00934 PE family RN05_RS05680 PF00934 PE family RN05_RS05690 PF00378 Enoyl-CoA hydratase/isomerase RN05_RS05710 PF00108 Thiolase, N-terminal domain RN05_RS05710 PF02803 Thiolase, C-terminal domain RN05_RS05715 PF13472 GDSL-like Lipase/Acylhydrolase family RN05_RS05720 PF07859 alpha/beta hydrolase fold RN05_RS05725 PF00571 CBS domain RN05_RS05725 PF00291 Pyridoxal-phosphate dependent enzyme RN05_RS05730 PF06271 RDD family RN05_RS05735 PF01053 Cys/Met metabolism PLP-dependent enzyme RN05_RS05740 PF03449 Transcription elongation factor, N-terminal RN05_RS05740 PF01272 Transcription elongation factor, GreA/GreB, C-term RN05_RS05750 PF02585 GlcNAc-PI de-N-acetylase RN05_RS05760 PF03190 Protein of unknown function, DUF255 RN05_RS05765 PF03006 Haemolysin-III related RN05_RS05770 PF01255 Putative undecaprenyl diphosphate synthase RN05_RS05780 PF01255 Putative undecaprenyl diphosphate synthase RN05_RS05785 PF00934 PE family RN05_RS05815 PF00485 Phosphoribulokinase / Uridine kinase family RN05_RS05820 PF00464 Serine hydroxymethyltransferase RN05_RS05825 PF03405 Fatty acid desaturase RN05_RS05830 PF13638 PIN domain RN05_RS05830 PF02562 PhoH-like protein RN05_RS05835 PF01522 Polysaccharide deacetylase RN05_RS05845 PF00206 Lyase RN05_RS05845 PF10415 Fumarase C C-terminus RN05_RS05850 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded RN05_RS05860 PF01594 AI-2E family transporter RN05_RS05865 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system RN05_RS05875 PF00135 Carboxylesterase family RN05_RS05885 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family RN05_RS05890 PF02609 Exonuclease VII small subunit RN05_RS05895 PF02601 Exonuclease VII, large subunit RN05_RS05895 PF13742 OB-fold nucleic acid binding domain RN05_RS05905 PF02401 LytB protein RN05_RS05915 PF06071 Protein of unknown function (DUF933) RN05_RS05915 PF01926 50S ribosome-binding GTPase RN05_RS05920 PF09957 Bacterial antitoxin of type II TA system, VapB RN05_RS05925 PF01850 PIN domain RN05_RS05965 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain RN05_RS05965 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain RN05_RS05970 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RN05_RS05970 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain RN05_RS05980 PF00561 alpha/beta hydrolase fold RN05_RS05995 PF02896 PEP-utilising enzyme, TIM barrel domain RN05_RS05995 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain RN05_RS05995 PF00391 PEP-utilising enzyme, mobile domain RN05_RS06000 PF02720 Domain of unknown function (DUF222) RN05_RS06005 PF01381 Helix-turn-helix RN05_RS06005 PF06114 IrrE N-terminal-like domain RN05_RS06005 PF09856 Predicted transcriptional regulator (DUF2083) RN05_RS06010 PF03972 MmgE/PrpD family RN05_RS06015 PF00285 Citrate synthase, C-terminal domain RN05_RS06025 PF08267 Cobalamin-independent synthase, N-terminal domain RN05_RS06025 PF01717 Cobalamin-independent synthase, Catalytic domain RN05_RS06035 PF01469 Pentapeptide repeats (8 copies) RN05_RS06035 PF00823 PPE family RN05_RS06040 PF00108 Thiolase, N-terminal domain RN05_RS06040 PF02803 Thiolase, C-terminal domain RN05_RS06045 PF00378 Enoyl-CoA hydratase/isomerase RN05_RS06055 PF01494 FAD binding domain RN05_RS06060 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family RN05_RS06070 PF00378 Enoyl-CoA hydratase/isomerase RN05_RS06075 PF00378 Enoyl-CoA hydratase/isomerase RN05_RS06080 PF02515 CoA-transferase family III RN05_RS06085 PF00106 short chain dehydrogenase RN05_RS06110 PF01844 HNH endonuclease RN05_RS06110 PF02720 Domain of unknown function (DUF222) RN05_RS06125 PF02146 Sir2 family RN05_RS06135 PF04072 Leucine carboxyl methyltransferase RN05_RS06145 PF01243 Pyridoxamine 5'-phosphate oxidase RN05_RS06150 PF17227 Family of unknown function (DUF5302) RN05_RS06170 PF09594 Glycosyltransferase family 87 RN05_RS06175 PF01329 Pterin 4 alpha carbinolamine dehydratase RN05_RS06180 PF00293 NUDIX domain RN05_RS06185 PF00384 Molybdopterin oxidoreductase RN05_RS06185 PF01568 Molydopterin dinucleotide binding domain RN05_RS06190 PF14711 Respiratory nitrate reductase beta C-terminal RN05_RS06190 PF13247 4Fe-4S dicluster domain RN05_RS06195 PF02665 Nitrate reductase gamma subunit RN05_RS06195 PF00384 Molybdopterin oxidoreductase RN05_RS06195 PF02613 Nitrate reductase delta subunit RN05_RS06200 PF02665 Nitrate reductase gamma subunit RN05_RS06200 PF02613 Nitrate reductase delta subunit RN05_RS06200 PF00384 Molybdopterin oxidoreductase RN05_RS06205 PF00679 Elongation factor G C-terminus RN05_RS06205 PF14492 Elongation Factor G, domain II RN05_RS06205 PF00009 Elongation factor Tu GTP binding domain RN05_RS06205 PF03144 Elongation factor Tu domain 2 RN05_RS06210 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RN05_RS06220 PF12484 Polymorphic PE/PPE proteins C terminal RN05_RS06220 PF00823 PPE family RN05_RS06225 PF00934 PE family RN05_RS06230 PF02585 GlcNAc-PI de-N-acetylase RN05_RS06240 PF00934 PE family RN05_RS06245 PF04055 Radical SAM superfamily RN05_RS06255 PF07992 Pyridine nucleotide-disulphide oxidoreductase RN05_RS06255 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RN05_RS06265 PF00037 4Fe-4S binding domain RN05_RS06270 PF00155 Aminotransferase class I and II RN05_RS06280 PF00550 Phosphopantetheine attachment site RN05_RS06280 PF02801 Beta-ketoacyl synthase, C-terminal domain RN05_RS06280 PF00109 Beta-ketoacyl synthase, N-terminal domain RN05_RS06280 PF14765 Polyketide synthase dehydratase RN05_RS06280 PF00698 Acyl transferase domain RN05_RS06280 PF08240 Alcohol dehydrogenase GroES-like domain RN05_RS06280 PF16197 Ketoacyl-synthetase C-terminal extension RN05_RS06280 PF08659 KR domain RN05_RS06280 PF00107 Zinc-binding dehydrogenase RN05_RS06285 PF00668 Condensation domain RN05_RS06290 PF03176 MMPL family RN05_RS06295 PF08237 PE-PPE domain RN05_RS06300 PF00501 AMP-binding enzyme RN05_RS06305 PF06018 CodY GAF-like domain RN05_RS06305 PF13556 PucR C-terminal helix-turn-helix domain RN05_RS06305 PF17853 GGDEF-like domain RN05_RS06310 PF00171 Aldehyde dehydrogenase family RN05_RS06315 PF01619 Proline dehydrogenase RN05_RS06320 PF08281 Sigma-70, region 4 RN05_RS06320 PF04542 Sigma-70 region 2 RN05_RS06325 PF00561 alpha/beta hydrolase fold RN05_RS06340 PF00501 AMP-binding enzyme RN05_RS06340 PF13193 AMP-binding enzyme C-terminal domain RN05_RS06350 PF00934 PE family RN05_RS06355 PF12484 Polymorphic PE/PPE proteins C terminal RN05_RS06355 PF00823 PPE family RN05_RS06360 PF06013 Proteins of 100 residues with WXG RN05_RS06365 PF06013 Proteins of 100 residues with WXG RN05_RS06370 PF00872 Transposase, Mutator family RN05_RS06375 PF07690 Major Facilitator Superfamily RN05_RS06375 PF00083 Sugar (and other) transporter RN05_RS06380 PF14602 Hexapeptide repeat of succinyl-transferase RN05_RS06380 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle RN05_RS06385 PF07687 Peptidase dimerisation domain RN05_RS06385 PF01546 Peptidase family M20/M25/M40 RN05_RS06400 PF03641 Possible lysine decarboxylase RN05_RS06405 PF00501 AMP-binding enzyme RN05_RS06405 PF13193 AMP-binding enzyme C-terminal domain RN05_RS06415 PF00809 Pterin binding enzyme RN05_RS06420 PF00535 Glycosyl transferase family 2 RN05_RS06430 PF13673 Acetyltransferase (GNAT) domain RN05_RS06430 PF13302 Acetyltransferase (GNAT) domain RN05_RS06430 PF03352 Methyladenine glycosylase RN05_RS06430 PF00117 Glutamine amidotransferase class-I RN05_RS06430 PF00958 GMP synthase C terminal domain RN05_RS06440 PF13439 Glycosyltransferase Family 4 RN05_RS06440 PF00534 Glycosyl transferases group 1 RN05_RS06445 PF00483 Nucleotidyl transferase RN05_RS06450 PF00934 PE family RN05_RS06470 PF13732 Domain of unknown function (DUF4162) RN05_RS06470 PF00005 ABC transporter RN05_RS06475 PF00440 Bacterial regulatory proteins, tetR family RN05_RS06475 PF17933 Tetracyclin repressor-like, C-terminal domain RN05_RS06480 PF01596 O-methyltransferase RN05_RS06485 PF08281 Sigma-70, region 4 RN05_RS06485 PF04542 Sigma-70 region 2 RN05_RS06495 PF13180 PDZ domain RN05_RS06500 PF02416 mttA/Hcf106 family RN05_RS06505 PF13419 Haloacid dehalogenase-like hydrolase RN05_RS06525 PF10609 NUBPL iron-transfer P-loop NTPase RN05_RS06525 PF01883 Iron-sulfur cluster assembly protein RN05_RS06540 PF03448 MgtE intracellular N domain RN05_RS06540 PF00571 CBS domain RN05_RS06540 PF01769 Divalent cation transporter RN05_RS06555 PF01547 Bacterial extracellular solute-binding protein RN05_RS06560 PF00528 Binding-protein-dependent transport system inner membrane component RN05_RS06565 PF00528 Binding-protein-dependent transport system inner membrane component RN05_RS06570 PF17912 MalK OB fold domain RN05_RS06570 PF00005 ABC transporter RN05_RS06575 PF01544 CorA-like Mg2+ transporter protein RN05_RS06580 PF00056 lactate/malate dehydrogenase, NAD binding domain RN05_RS06580 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain RN05_RS06590 PF01850 PIN domain RN05_RS06605 PF00106 short chain dehydrogenase RN05_RS06610 PF05016 ParE toxin of type II toxin-antitoxin system, parDE RN05_RS06615 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system RN05_RS06620 PF00676 Dehydrogenase E1 component RN05_RS06620 PF16870 2-oxoglutarate dehydrogenase C-terminal RN05_RS06620 PF02779 Transketolase, pyrimidine binding domain RN05_RS06620 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RN05_RS06620 PF16078 2-oxoglutarate dehydrogenase N-terminus RN05_RS06630 PF07690 Major Facilitator Superfamily RN05_RS06640 PF14041 LppP/LprE lipoprotein RN05_RS06645 PF03880 DbpA RNA binding domain RN05_RS06645 PF00270 DEAD/DEAH box helicase RN05_RS06645 PF00271 Helicase conserved C-terminal domain RN05_RS06655 PF00440 Bacterial regulatory proteins, tetR family RN05_RS06660 PF00067 Cytochrome P450 RN05_RS06665 PF02913 FAD linked oxidases, C-terminal domain RN05_RS06665 PF01565 FAD binding domain RN05_RS06670 PF07690 Major Facilitator Superfamily RN05_RS06675 PF03167 Uracil DNA glycosylase superfamily RN05_RS06680 PF01494 FAD binding domain RN05_RS06685 PF04075 F420H(2)-dependent quinone reductase RN05_RS06690 PF01230 HIT domain RN05_RS06695 PF01425 Amidase RN05_RS06700 PF16701 Adenylate cyclase regulatory domain RN05_RS06700 PF00211 Adenylate and Guanylate cyclase catalytic domain RN05_RS06710 PF14032 PknH-like extracellular domain RN05_RS06710 PF00069 Protein kinase domain RN05_RS06715 PF00486 Transcriptional regulatory protein, C terminal RN05_RS06715 PF03704 Bacterial transcriptional activator domain RN05_RS06715 PF00498 FHA domain RN05_RS06720 PF13529 Peptidase_C39 like family RN05_RS06725 PF13827 Domain of unknown function (DUF4189) RN05_RS06730 PF07161 LppX_LprAFG lipoprotein RN05_RS06735 PF05305 Protein of unknown function (DUF732) RN05_RS06740 PF00005 ABC transporter RN05_RS06740 PF00664 ABC transporter transmembrane region RN05_RS06745 PF00005 ABC transporter RN05_RS06745 PF00664 ABC transporter transmembrane region RN05_RS06750 PF12079 Protein of unknown function (DUF3558) RN05_RS06760 PF00300 Histidine phosphatase superfamily (branch 1) RN05_RS06770 PF13175 AAA ATPase domain RN05_RS06775 PF05199 GMC oxidoreductase RN05_RS06775 PF00732 GMC oxidoreductase RN05_RS06780 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RN05_RS06785 PF00005 ABC transporter RN05_RS06785 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RN05_RS06790 PF00528 Binding-protein-dependent transport system inner membrane component RN05_RS06790 PF12911 N-terminal TM domain of oligopeptide transport permease C RN05_RS06795 PF00528 Binding-protein-dependent transport system inner membrane component RN05_RS06800 PF00484 Carbonic anhydrase RN05_RS06805 PF01507 Phosphoadenosine phosphosulfate reductase family RN05_RS06810 PF00009 Elongation factor Tu GTP binding domain RN05_RS06815 PF02082 Transcriptional regulator RN05_RS06820 PF00756 Putative esterase RN05_RS06820 PF01476 LysM domain RN05_RS06830 PF10011 Predicted membrane protein (DUF2254) RN05_RS06840 PF05305 Protein of unknown function (DUF732) RN05_RS06850 PF05746 DALR anticodon binding domain RN05_RS06850 PF03485 Arginyl tRNA synthetase N terminal domain RN05_RS06850 PF00750 tRNA synthetases class I (R) RN05_RS06855 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain RN05_RS06855 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain RN05_RS06860 PF03447 Homoserine dehydrogenase, NAD binding domain RN05_RS06860 PF01842 ACT domain RN05_RS06860 PF00742 Homoserine dehydrogenase RN05_RS06865 PF00291 Pyridoxal-phosphate dependent enzyme RN05_RS06875 PF00288 GHMP kinases N terminal domain RN05_RS06885 PF07498 Rho termination factor, N-terminal domain RN05_RS06885 PF07497 Rho termination factor, RNA-binding domain RN05_RS06885 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RN05_RS06890 PF01197 Ribosomal protein L31 RN05_RS06895 PF00472 RF-1 domain RN05_RS06895 PF03462 PCRF domain RN05_RS06900 PF13649 Methyltransferase domain RN05_RS06900 PF17827 PrmC N-terminal domain RN05_RS06905 PF01300 Telomere recombination RN05_RS06910 PF00953 Glycosyl transferase family 4 RN05_RS06915 PF03899 ATP synthase I chain RN05_RS06920 PF00119 ATP synthase A chain RN05_RS06925 PF00137 ATP synthase subunit C RN05_RS06930 PF00430 ATP synthase B/B' CF(0) RN05_RS06935 PF00213 ATP synthase delta (OSCP) subunit RN05_RS06935 PF00430 ATP synthase B/B' CF(0) RN05_RS06940 PF02874 ATP synthase alpha/beta family, beta-barrel domain RN05_RS06940 PF00306 ATP synthase alpha/beta chain, C terminal domain RN05_RS06940 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RN05_RS06945 PF00231 ATP synthase RN05_RS06950 PF02874 ATP synthase alpha/beta family, beta-barrel domain RN05_RS06950 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RN05_RS06955 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain RN05_RS06960 PF10739 Protein of unknown function (DUF2550) RN05_RS06965 PF13542 Helix-turn-helix domain of transposase family ISL3 RN05_RS06965 PF01610 Transposase RN05_RS06965 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 RN05_RS06970 PF01923 Cobalamin adenosyltransferase RN05_RS06975 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RN05_RS06995 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RN05_RS06995 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain RN05_RS07000 PF02805 Metal binding domain of Ada RN05_RS07000 PF12833 Helix-turn-helix domain RN05_RS07000 PF00730 HhH-GPD superfamily base excision DNA repair protein RN05_RS07000 PF06029 AlkA N-terminal domain RN05_RS07005 PF00672 HAMP domain RN05_RS07005 PF00211 Adenylate and Guanylate cyclase catalytic domain RN05_RS07010 PF00672 HAMP domain RN05_RS07010 PF00211 Adenylate and Guanylate cyclase catalytic domain RN05_RS07015 PF00211 Adenylate and Guanylate cyclase catalytic domain RN05_RS07015 PF00672 HAMP domain RN05_RS07020 PF01939 Endonuclease NucS RN05_RS07035 PF00108 Thiolase, N-terminal domain RN05_RS07035 PF02803 Thiolase, C-terminal domain RN05_RS07040 PF00085 Thioredoxin RN05_RS07055 PF00934 PE family RN05_RS07060 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RN05_RS07060 PF02806 Alpha amylase, C-terminal all-beta domain RN05_RS07060 PF00128 Alpha amylase, catalytic domain RN05_RS07065 PF11896 Domain of unknown function (DUF3416) RN05_RS07065 PF00128 Alpha amylase, catalytic domain RN05_RS07070 PF00343 Carbohydrate phosphorylase RN05_RS07070 PF11897 Protein of unknown function (DUF3417) RN05_RS07075 PF13307 Helicase C-terminal domain RN05_RS07080 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain RN05_RS07080 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain RN05_RS07085 PF02617 ATP-dependent Clp protease adaptor protein ClpS RN05_RS07090 PF09438 Domain of unknown function (DUF2017) RN05_RS07095 PF03576 Peptidase family S58 RN05_RS07100 PF14464 Prokaryotic homologs of the JAB domain RN05_RS07105 PF02597 ThiS family RN05_RS07110 PF00291 Pyridoxal-phosphate dependent enzyme RN05_RS07115 PF01694 Rhomboid family RN05_RS07120 PF01177 Asp/Glu/Hydantoin racemase RN05_RS07125 PF12706 Beta-lactamase superfamily domain RN05_RS07130 PF01138 3' exoribonuclease family, domain 1 RN05_RS07130 PF03725 3' exoribonuclease family, domain 2 RN05_RS07135 PF01725 Ham1 family RN05_RS07140 PF12823 Domain of unknown function (DUF3817) RN05_RS07150 PF00550 Phosphopantetheine attachment site RN05_RS07155 PF00501 AMP-binding enzyme RN05_RS07160 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RN05_RS07160 PF02770 Acyl-CoA dehydrogenase, middle domain RN05_RS07160 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RN05_RS07175 PF00005 ABC transporter RN05_RS07175 PF00664 ABC transporter transmembrane region RN05_RS07175 PF04954 Siderophore-interacting protein RN05_RS07175 PF08021 Siderophore-interacting FAD-binding domain RN05_RS07180 PF00005 ABC transporter RN05_RS07200 PF00440 Bacterial regulatory proteins, tetR family RN05_RS07200 PF02909 Tetracyclin repressor-like, C-terminal domain RN05_RS07205 PF00990 Diguanylate cyclase, GGDEF domain RN05_RS07205 PF13185 GAF domain RN05_RS07205 PF00563 EAL domain RN05_RS07210 PF00899 ThiF family RN05_RS07220 PF00563 EAL domain RN05_RS07225 PF00196 Bacterial regulatory proteins, luxR family RN05_RS07240 PF00296 Luciferase-like monooxygenase RN05_RS07245 PF12484 Polymorphic PE/PPE proteins C terminal RN05_RS07245 PF00823 PPE family RN05_RS07260 PF13466 STAS domain RN05_RS07260 PF07228 Stage II sporulation protein E (SpoIIE) RN05_RS07260 PF08448 PAS fold RN05_RS07260 PF13581 Histidine kinase-like ATPase domain RN05_RS07265 PF01740 STAS domain RN05_RS07270 PF04607 Region found in RelA / SpoT proteins RN05_RS07280 PF00144 Beta-lactamase RN05_RS07285 PF07161 LppX_LprAFG lipoprotein RN05_RS07290 PF13276 HTH-like domain RN05_RS07290 PF00665 Integrase core domain RN05_RS07295 PF01527 Transposase RN05_RS07305 PF00195 Chalcone and stilbene synthases, N-terminal domain RN05_RS07305 PF02797 Chalcone and stilbene synthases, C-terminal domain RN05_RS07310 PF00685 Sulfotransferase domain RN05_RS07320 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding RN05_RS07330 PF13649 Methyltransferase domain RN05_RS07340 PF00156 Phosphoribosyl transferase domain RN05_RS07345 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RN05_RS07345 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RN05_RS07350 PF01979 Amidohydrolase family RN05_RS07360 PF00117 Glutamine amidotransferase class-I RN05_RS07360 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain RN05_RS07365 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain RN05_RS07365 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RN05_RS07365 PF02142 MGS-like domain RN05_RS07370 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family RN05_RS07375 PF00934 PE family RN05_RS07380 PF00823 PPE family RN05_RS07395 PF00625 Guanylate kinase RN05_RS07400 PF01192 RNA polymerase Rpb6 RN05_RS07405 PF04127 DNA / pantothenate metabolism flavoprotein RN05_RS07405 PF02441 Flavoprotein RN05_RS07410 PF02773 S-adenosylmethionine synthetase, C-terminal domain RN05_RS07410 PF02772 S-adenosylmethionine synthetase, central domain RN05_RS07410 PF00438 S-adenosylmethionine synthetase, N-terminal domain RN05_RS07415 PF00743 Flavin-binding monooxygenase-like RN05_RS07420 PF00067 Cytochrome P450 RN05_RS07425 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term RN05_RS07425 PF12833 Helix-turn-helix domain RN05_RS07430 PF00934 PE family RN05_RS07435 PF01850 PIN domain RN05_RS07440 PF01402 Ribbon-helix-helix protein, copG family RN05_RS07445 PF07859 alpha/beta hydrolase fold RN05_RS07450 PF07859 alpha/beta hydrolase fold RN05_RS07455 PF07947 YhhN family RN05_RS07460 PF17764 3′ DNA-binding domain (3′BD) RN05_RS07465 PF13649 Methyltransferase domain RN05_RS07475 PF08241 Methyltransferase domain RN05_RS07480 PF00551 Formyl transferase RN05_RS07480 PF02911 Formyl transferase, C-terminal domain RN05_RS07485 PF01189 16S rRNA methyltransferase RsmB/F RN05_RS07485 PF01029 NusB family RN05_RS07490 PF00834 Ribulose-phosphate 3 epimerase family RN05_RS07495 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RN05_RS07495 PF01872 RibD C-terminal domain RN05_RS07500 PF07690 Major Facilitator Superfamily RN05_RS07505 PF07161 LppX_LprAFG lipoprotein RN05_RS07510 PF00677 Lumazine binding domain RN05_RS07515 PF01168 Alanine racemase, N-terminal domain RN05_RS07520 PF14031 Putative serine dehydratase domain RN05_RS07525 PF00925 GTP cyclohydrolase II RN05_RS07525 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase RN05_RS07530 PF00885 6,7-dimethyl-8-ribityllumazine synthase RN05_RS07535 PF10756 Bacterial PH domain RN05_RS07545 PF00652 Ricin-type beta-trefoil lectin domain RN05_RS07550 PF02151 UvrB/uvrC motif RN05_RS07550 PF01541 GIY-YIG catalytic domain RN05_RS07550 PF08459 UvrC Helix-hairpin-helix N-terminal RN05_RS07555 PF03668 P-loop ATPase protein family RN05_RS07560 PF01933 Uncharacterised protein family UPF0052 RN05_RS07565 PF14527 WhiA LAGLIDADG-like domain RN05_RS07565 PF02650 WhiA C-terminal HTH domain RN05_RS07565 PF10298 WhiA N-terminal LAGLIDADG-like domain RN05_RS07575 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain RN05_RS07575 PF06974 Protein of unknown function (DUF1298) RN05_RS07580 PF07859 alpha/beta hydrolase fold RN05_RS07585 PF13193 AMP-binding enzyme C-terminal domain RN05_RS07585 PF00501 AMP-binding enzyme RN05_RS07600 PF08237 PE-PPE domain RN05_RS07600 PF00934 PE family RN05_RS07615 PF03734 L,D-transpeptidase catalytic domain RN05_RS07615 PF17964 Bacterial Ig domain RN05_RS07630 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RN05_RS07630 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain RN05_RS07635 PF00162 Phosphoglycerate kinase RN05_RS07640 PF00121 Triosephosphate isomerase RN05_RS07655 PF03840 Preprotein translocase SecG subunit RN05_RS07660 PF00934 PE family RN05_RS07665 PF01568 Molydopterin dinucleotide binding domain RN05_RS07665 PF18364 Molybdopterin oxidoreductase N-terminal domain RN05_RS07665 PF00384 Molybdopterin oxidoreductase RN05_RS07685 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase RN05_RS07695 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain RN05_RS07695 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain RN05_RS07700 PF00923 Transaldolase/Fructose-6-phosphate aldolase RN05_RS07705 PF00456 Transketolase, thiamine diphosphate binding domain RN05_RS07705 PF02780 Transketolase, C-terminal domain RN05_RS07705 PF02779 Transketolase, pyrimidine binding domain RN05_RS07720 PF01040 UbiA prenyltransferase family RN05_RS07735 PF00107 Zinc-binding dehydrogenase RN05_RS07735 PF08240 Alcohol dehydrogenase GroES-like domain RN05_RS07755 PF00005 ABC transporter RN05_RS07770 PF01458 Uncharacterized protein family (UPF0051) RN05_RS07775 PF01458 Uncharacterized protein family (UPF0051) RN05_RS07780 PF00005 ABC transporter RN05_RS07785 PF00266 Aminotransferase class-V RN05_RS07790 PF01592 NifU-like N terminal domain RN05_RS07795 PF01883 Iron-sulfur cluster assembly protein RN05_RS07800 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RN05_RS07800 PF02770 Acyl-CoA dehydrogenase, middle domain RN05_RS07800 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RN05_RS07805 PF00934 PE family RN05_RS07820 PF00085 Thioredoxin RN05_RS07825 PF00378 Enoyl-CoA hydratase/isomerase RN05_RS07830 PF00005 ABC transporter RN05_RS07830 PF12848 ABC transporter RN05_RS07840 PF00440 Bacterial regulatory proteins, tetR family RN05_RS07845 PF00694 Aconitase C-terminal domain RN05_RS07845 PF00330 Aconitase family (aconitate hydratase) RN05_RS07855 PF00877 NlpC/P60 family RN05_RS07860 PF00877 NlpC/P60 family RN05_RS07865 PF07726 ATPase family associated with various cellular activities (AAA) RN05_RS07865 PF17863 AAA lid domain RN05_RS07870 PF01882 Protein of unknown function DUF58 RN05_RS07875 PF13519 von Willebrand factor type A domain RN05_RS07895 PF00762 Ferrochelatase RN05_RS07910 PF01145 SPFH domain / Band 7 family RN05_RS07920 PF02310 B12 binding domain RN05_RS07920 PF01642 Methylmalonyl-CoA mutase RN05_RS07930 PF09335 SNARE associated Golgi protein RN05_RS07935 PF01642 Methylmalonyl-CoA mutase RN05_RS07940 PF02310 B12 binding domain RN05_RS07940 PF01642 Methylmalonyl-CoA mutase RN05_RS07950 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system RN05_RS07960 PF00144 Beta-lactamase RN05_RS07965 PF08241 Methyltransferase domain RN05_RS07970 PF07311 Dodecin RN05_RS07980 PF00535 Glycosyl transferase family 2 RN05_RS07985 PF05721 Phytanoyl-CoA dioxygenase (PhyH) RN05_RS08000 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RN05_RS08010 PF13649 Methyltransferase domain RN05_RS08015 PF08889 WbqC-like protein family RN05_RS08030 PF16363 GDP-mannose 4,6 dehydratase RN05_RS08045 PF16363 GDP-mannose 4,6 dehydratase RN05_RS08050 PF01370 NAD dependent epimerase/dehydratase family RN05_RS08060 PF00535 Glycosyl transferase family 2 RN05_RS08070 PF00535 Glycosyl transferase family 2 RN05_RS08075 PF11139 Sap, sulfolipid-1-addressing protein RN05_RS08080 PF00535 Glycosyl transferase family 2 RN05_RS08085 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RN05_RS08090 PF00535 Glycosyl transferase family 2 RN05_RS08095 PF00501 AMP-binding enzyme RN05_RS08100 PF03176 MMPL family RN05_RS08105 PF08241 Methyltransferase domain RN05_RS08110 PF03033 Glycosyltransferase family 28 N-terminal domain RN05_RS08120 PF03033 Glycosyltransferase family 28 N-terminal domain RN05_RS08125 PF16197 Ketoacyl-synthetase C-terminal extension RN05_RS08125 PF00109 Beta-ketoacyl synthase, N-terminal domain RN05_RS08125 PF14765 Polyketide synthase dehydratase RN05_RS08125 PF00550 Phosphopantetheine attachment site RN05_RS08125 PF08240 Alcohol dehydrogenase GroES-like domain RN05_RS08125 PF08659 KR domain RN05_RS08125 PF00698 Acyl transferase domain RN05_RS08125 PF00107 Zinc-binding dehydrogenase RN05_RS08125 PF02801 Beta-ketoacyl synthase, C-terminal domain RN05_RS08135 PF00501 AMP-binding enzyme RN05_RS08140 PF08240 Alcohol dehydrogenase GroES-like domain RN05_RS08140 PF00107 Zinc-binding dehydrogenase RN05_RS08155 PF03060 Nitronate monooxygenase RN05_RS08160 PF00440 Bacterial regulatory proteins, tetR family RN05_RS08160 PF16295 Tetracyclin repressor-like, C-terminal domain RN05_RS08170 PF00133 tRNA synthetases class I (I, L, M and V) RN05_RS08170 PF08264 Anticodon-binding domain of tRNA RN05_RS08175 PF11798 IMS family HHH motif RN05_RS08175 PF11799 impB/mucB/samB family C-terminal domain RN05_RS08175 PF00817 impB/mucB/samB family RN05_RS08180 PF17763 Glutaminase/Asparaginase C-terminal domain RN05_RS08180 PF00710 Asparaginase, N-terminal RN05_RS08185 PF01252 Signal peptidase (SPase) II RN05_RS08190 PF00849 RNA pseudouridylate synthase RN05_RS08195 PF07007 Lysozyme inhibitor LprI RN05_RS08195 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme RN05_RS08200 PF01152 Bacterial-like globin RN05_RS08205 PF00106 short chain dehydrogenase RN05_RS08210 PF00106 short chain dehydrogenase RN05_RS08220 PF10604 Polyketide cyclase / dehydrase and lipid transport RN05_RS08225 PF07733 Bacterial DNA polymerase III alpha NTPase domain RN05_RS08225 PF17657 Bacterial DNA polymerase III alpha subunit finger domain RN05_RS08225 PF02811 PHP domain RN05_RS08225 PF14579 Helix-hairpin-helix motif RN05_RS08230 PF00823 PPE family RN05_RS08230 PF01469 Pentapeptide repeats (8 copies) RN05_RS08235 PF00501 AMP-binding enzyme RN05_RS08240 PF01553 Acyltransferase RN05_RS08255 PF13183 4Fe-4S dicluster domain RN05_RS08255 PF13085 2Fe-2S iron-sulfur cluster binding domain RN05_RS08260 PF02300 Fumarate reductase subunit C RN05_RS08265 PF02313 Fumarate reductase subunit D RN05_RS08270 PF00440 Bacterial regulatory proteins, tetR family RN05_RS08270 PF16859 Tetracyclin repressor-like, C-terminal domain RN05_RS08275 PF03176 MMPL family RN05_RS08280 PF04075 F420H(2)-dependent quinone reductase RN05_RS08285 PF00291 Pyridoxal-phosphate dependent enzyme RN05_RS08285 PF00585 C-terminal regulatory domain of Threonine dehydratase RN05_RS08290 PF09957 Bacterial antitoxin of type II TA system, VapB RN05_RS08295 PF01850 PIN domain RN05_RS08300 PF00128 Alpha amylase, catalytic domain RN05_RS08300 PF11941 Domain of unknown function (DUF3459) RN05_RS08305 PF00128 Alpha amylase, catalytic domain RN05_RS08310 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RN05_RS08310 PF00128 Alpha amylase, catalytic domain RN05_RS08315 PF01757 Acyltransferase family RN05_RS08320 PF00877 NlpC/P60 family RN05_RS08330 PF00202 Aminotransferase class-III RN05_RS08335 PF00155 Aminotransferase class I and II RN05_RS08400 PF10888 Protein of unknown function (DUF2742) RN05_RS08420 PF02720 Domain of unknown function (DUF222) RN05_RS08420 PF01844 HNH endonuclease RN05_RS08425 PF06968 Biotin and Thiamin Synthesis associated domain RN05_RS08425 PF04055 Radical SAM superfamily RN05_RS08435 PF10821 Protein of unknown function (DUF2567) RN05_RS08440 PF03583 Secretory lipase RN05_RS08450 PF02445 Quinolinate synthetase A protein RN05_RS08455 PF02910 Fumarate reductase flavoprotein C-term RN05_RS08455 PF00890 FAD binding domain RN05_RS08460 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain RN05_RS08460 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain RN05_RS08475 PF00815 Histidinol dehydrogenase RN05_RS08480 PF00155 Aminotransferase class I and II RN05_RS08485 PF00475 Imidazoleglycerol-phosphate dehydratase RN05_RS08490 PF00117 Glutamine amidotransferase class-I RN05_RS08495 PF00977 Histidine biosynthesis protein RN05_RS08500 PF00459 Inositol monophosphatase family RN05_RS08505 PF00977 Histidine biosynthesis protein RN05_RS08510 PF01502 Phosphoribosyl-AMP cyclohydrolase RN05_RS08515 PF01699 Sodium/calcium exchanger protein RN05_RS08520 PF00578 AhpC/TSA family RN05_RS08525 PF00425 chorismate binding enzyme RN05_RS08525 PF04715 Anthranilate synthase component I, N terminal region RN05_RS08535 PF00218 Indole-3-glycerol phosphate synthase RN05_RS08540 PF00291 Pyridoxal-phosphate dependent enzyme RN05_RS08545 PF00290 Tryptophan synthase alpha chain RN05_RS08550 PF01790 Prolipoprotein diacylglyceryl transferase RN05_RS08565 PF02887 Pyruvate kinase, alpha/beta domain RN05_RS08565 PF00224 Pyruvate kinase, barrel domain RN05_RS08575 PF00583 Acetyltransferase (GNAT) family RN05_RS08580 PF00005 ABC transporter RN05_RS08585 PF00005 ABC transporter RN05_RS08585 PF00664 ABC transporter transmembrane region RN05_RS08590 PF02322 Cytochrome bd terminal oxidase subunit II RN05_RS08595 PF01654 Cytochrome bd terminal oxidase subunit I RN05_RS08605 PF00211 Adenylate and Guanylate cyclase catalytic domain RN05_RS08615 PF00072 Response regulator receiver domain RN05_RS08615 PF03861 ANTAR domain RN05_RS08630 PF00476 DNA polymerase family A RN05_RS08630 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain RN05_RS08630 PF01367 5'-3' exonuclease, C-terminal SAM fold RN05_RS08635 PF00575 S1 RNA binding domain RN05_RS08640 PF01121 Dephospho-CoA kinase RN05_RS08640 PF04229 GrpB protein RN05_RS08650 PF12344 Ultra-violet resistance protein B RN05_RS08650 PF04851 Type III restriction enzyme, res subunit RN05_RS08650 PF17757 UvrB interaction domain RN05_RS08650 PF02151 UvrB/uvrC motif RN05_RS08650 PF00271 Helicase conserved C-terminal domain RN05_RS08655 PF07690 Major Facilitator Superfamily RN05_RS08665 PF00582 Universal stress protein family RN05_RS08670 PF00753 Metallo-beta-lactamase superfamily RN05_RS08675 PF17755 UvrA DNA-binding domain RN05_RS08675 PF00005 ABC transporter RN05_RS08675 PF17760 UvrA interaction domain RN05_RS08690 PF09924 Uncharacterised conserved protein (DUF2156) RN05_RS08690 PF00152 tRNA synthetases class II (D, K and N) RN05_RS08690 PF16995 Transmembrane region of lysyl-tRNA synthetase RN05_RS08690 PF01336 OB-fold nucleic acid binding domain RN05_RS08695 PF00707 Translation initiation factor IF-3, C-terminal domain RN05_RS08695 PF05198 Translation initiation factor IF-3, N-terminal domain RN05_RS08700 PF01632 Ribosomal protein L35 RN05_RS08705 PF00453 Ribosomal protein L20 RN05_RS08710 PF00588 SpoU rRNA Methylase family RN05_RS08720 PF00934 PE family RN05_RS08735 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain RN05_RS08735 PF01409 tRNA synthetases class II core domain (F) RN05_RS08740 PF03483 B3/4 domain RN05_RS08740 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain RN05_RS08740 PF03484 tRNA synthetase B5 domain RN05_RS08740 PF03147 Ferredoxin-fold anticodon binding domain RN05_RS08740 PF01588 Putative tRNA binding domain RN05_RS08745 PF00934 PE family RN05_RS08750 PF01118 Semialdehyde dehydrogenase, NAD binding domain RN05_RS08750 PF02774 Semialdehyde dehydrogenase, dimerisation domain RN05_RS08755 PF01960 ArgJ family RN05_RS08760 PF00696 Amino acid kinase family RN05_RS08765 PF00202 Aminotransferase class-III RN05_RS08770 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RN05_RS08770 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RN05_RS08775 PF02863 Arginine repressor, C-terminal domain RN05_RS08775 PF01316 Arginine repressor, DNA binding domain RN05_RS08780 PF00764 Arginosuccinate synthase RN05_RS08785 PF00206 Lyase RN05_RS08785 PF14698 Argininosuccinate lyase C-terminal RN05_RS08790 PF00195 Chalcone and stilbene synthases, N-terminal domain RN05_RS08790 PF02797 Chalcone and stilbene synthases, C-terminal domain RN05_RS08800 PF00698 Acyl transferase domain RN05_RS08800 PF08240 Alcohol dehydrogenase GroES-like domain RN05_RS08800 PF16197 Ketoacyl-synthetase C-terminal extension RN05_RS08800 PF00109 Beta-ketoacyl synthase, N-terminal domain RN05_RS08800 PF02801 Beta-ketoacyl synthase, C-terminal domain RN05_RS08800 PF08659 KR domain RN05_RS08800 PF00550 Phosphopantetheine attachment site RN05_RS08800 PF14765 Polyketide synthase dehydratase RN05_RS08805 PF08240 Alcohol dehydrogenase GroES-like domain RN05_RS08805 PF08659 KR domain RN05_RS08805 PF00698 Acyl transferase domain RN05_RS08805 PF14765 Polyketide synthase dehydratase RN05_RS08805 PF00550 Phosphopantetheine attachment site RN05_RS08810 PF00698 Acyl transferase domain RN05_RS08810 PF00698 Acyl transferase domain RN05_RS08810 PF00109 Beta-ketoacyl synthase, N-terminal domain RN05_RS08810 PF08240 Alcohol dehydrogenase GroES-like domain RN05_RS08810 PF14765 Polyketide synthase dehydratase RN05_RS08810 PF08240 Alcohol dehydrogenase GroES-like domain RN05_RS08810 PF16197 Ketoacyl-synthetase C-terminal extension RN05_RS08810 PF00550 Phosphopantetheine attachment site RN05_RS08810 PF08659 KR domain RN05_RS08810 PF00109 Beta-ketoacyl synthase, N-terminal domain RN05_RS08810 PF02801 Beta-ketoacyl synthase, C-terminal domain RN05_RS08810 PF08659 KR domain RN05_RS08810 PF00550 Phosphopantetheine attachment site RN05_RS08810 PF14765 Polyketide synthase dehydratase RN05_RS08810 PF16197 Ketoacyl-synthetase C-terminal extension RN05_RS08810 PF02801 Beta-ketoacyl synthase, C-terminal domain RN05_RS08815 PF02797 Chalcone and stilbene synthases, C-terminal domain RN05_RS08815 PF00195 Chalcone and stilbene synthases, N-terminal domain RN05_RS08820 PF00067 Cytochrome P450 RN05_RS08845 PF07690 Major Facilitator Superfamily RN05_RS08855 PF00581 Rhodanese-like domain RN05_RS08860 PF13545 Crp-like helix-turn-helix domain RN05_RS08860 PF00027 Cyclic nucleotide-binding domain RN05_RS08870 PF00578 AhpC/TSA family RN05_RS08880 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RN05_RS08880 PF02770 Acyl-CoA dehydrogenase, middle domain RN05_RS08880 PF08028 Acyl-CoA dehydrogenase, C-terminal domain RN05_RS08905 PF03966 Trm112p-like protein RN05_RS08920 PF00005 ABC transporter RN05_RS08925 PF02245 Methylpurine-DNA glycosylase (MPG) RN05_RS08930 PF00579 tRNA synthetases class I (W and Y) RN05_RS08935 PF05305 Protein of unknown function (DUF732) RN05_RS08945 PF13344 Haloacid dehalogenase-like hydrolase RN05_RS08945 PF18407 GCN5-related N-acetyltransferase like domain RN05_RS08955 PF01479 S4 domain RN05_RS08955 PF01728 FtsJ-like methyltransferase RN05_RS08960 PF01513 ATP-NAD kinase RN05_RS08965 PF02463 RecF/RecN/SMC N terminal domain RN05_RS08975 PF11382 Copper transport outer membrane protein, MctB RN05_RS08980 PF00117 Glutamine amidotransferase class-I RN05_RS08980 PF06418 CTP synthase N-terminus RN05_RS08985 PF00293 NUDIX domain RN05_RS08990 PF02899 Phage integrase, N-terminal SAM-like domain RN05_RS08990 PF00589 Phage integrase family RN05_RS08995 PF02720 Domain of unknown function (DUF222) RN05_RS09000 PF01596 O-methyltransferase RN05_RS09005 PF00324 Amino acid permease RN05_RS09010 PF00823 PPE family RN05_RS09010 PF12484 Polymorphic PE/PPE proteins C terminal RN05_RS09015 PF12484 Polymorphic PE/PPE proteins C terminal RN05_RS09015 PF00823 PPE family RN05_RS09025 PF00916 Sulfate permease family RN05_RS09025 PF01740 STAS domain RN05_RS09030 PF13614 AAA domain RN05_RS09035 PF02616 Segregation and condensation protein ScpA RN05_RS09040 PF04079 Segregation and condensation complex subunit ScpB RN05_RS09045 PF00849 RNA pseudouridylate synthase RN05_RS09045 PF01479 S4 domain RN05_RS09050 PF02224 Cytidylate kinase RN05_RS09055 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal RN05_RS09055 PF01926 50S ribosome-binding GTPase RN05_RS09065 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RN05_RS09065 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RN05_RS09080 PF05853 beta-keto acid cleavage enzyme RN05_RS09100 PF01850 PIN domain RN05_RS09125 PF01638 HxlR-like helix-turn-helix RN05_RS09145 PF04072 Leucine carboxyl methyltransferase RN05_RS09150 PF00144 Beta-lactamase RN05_RS09155 PF00171 Aldehyde dehydrogenase family RN05_RS09170 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RN05_RS09175 PF03595 Voltage-dependent anion channel RN05_RS09185 PF02665 Nitrate reductase gamma subunit RN05_RS09185 PF00384 Molybdopterin oxidoreductase RN05_RS09185 PF02613 Nitrate reductase delta subunit RN05_RS09190 PF07690 Major Facilitator Superfamily RN05_RS09195 PF08962 Domain of unknown function (DUF1876) RN05_RS09200 PF01740 STAS domain RN05_RS09200 PF00916 Sulfate permease family RN05_RS09205 PF07704 Rv0623-like transcription factor RN05_RS09220 PF00069 Protein kinase domain RN05_RS09220 PF13462 Thioredoxin RN05_RS09230 PF00293 NUDIX domain RN05_RS09235 PF00069 Protein kinase domain RN05_RS09240 PF00005 ABC transporter RN05_RS09240 PF01061 ABC-2 type transporter RN05_RS09240 PF00498 FHA domain RN05_RS09255 PF00501 AMP-binding enzyme RN05_RS09255 PF13193 AMP-binding enzyme C-terminal domain RN05_RS09260 PF01494 FAD binding domain RN05_RS09270 PF00823 PPE family RN05_RS09270 PF01469 Pentapeptide repeats (8 copies) RN05_RS09280 PF04185 Phosphoesterase family RN05_RS09285 PF13276 HTH-like domain RN05_RS09285 PF00665 Integrase core domain RN05_RS09290 PF01527 Transposase RN05_RS09300 PF00534 Glycosyl transferases group 1 RN05_RS09300 PF13579 Glycosyl transferase 4-like domain RN05_RS09305 PF00174 Oxidoreductase molybdopterin binding domain RN05_RS09315 PF01083 Cutinase RN05_RS09320 PF00665 Integrase core domain RN05_RS09320 PF13276 HTH-like domain RN05_RS09325 PF01527 Transposase RN05_RS09335 PF08237 PE-PPE domain RN05_RS09335 PF00823 PPE family RN05_RS09340 PF01527 Transposase RN05_RS09345 PF13276 HTH-like domain RN05_RS09345 PF00665 Integrase core domain RN05_RS09350 PF01527 Transposase RN05_RS09355 PF13276 HTH-like domain RN05_RS09355 PF00665 Integrase core domain RN05_RS09360 PF13276 HTH-like domain RN05_RS09360 PF00665 Integrase core domain RN05_RS09370 PF00665 Integrase core domain RN05_RS09370 PF13276 HTH-like domain RN05_RS09375 PF02583 Metal-sensitive transcriptional repressor RN05_RS09380 PF02627 Carboxymuconolactone decarboxylase family RN05_RS09385 PF00934 PE family RN05_RS09400 PF04030 D-arabinono-1,4-lactone oxidase RN05_RS09400 PF01565 FAD binding domain RN05_RS09425 PF00440 Bacterial regulatory proteins, tetR family RN05_RS09430 PF00067 Cytochrome P450 RN05_RS09450 PF02446 4-alpha-glucanotransferase RN05_RS09455 PF05108 Type VII secretion system ESX-1, transport TM domain B RN05_RS09460 PF01580 FtsK/SpoIIIE family RN05_RS09465 PF00067 Cytochrome P450 RN05_RS09475 PF00823 PPE family RN05_RS09475 PF12484 Polymorphic PE/PPE proteins C terminal RN05_RS09480 PF00934 PE family RN05_RS09485 PF00823 PPE family RN05_RS09485 PF12484 Polymorphic PE/PPE proteins C terminal RN05_RS09490 PF00823 PPE family RN05_RS09490 PF12484 Polymorphic PE/PPE proteins C terminal RN05_RS09495 PF00934 PE family RN05_RS09500 PF06013 Proteins of 100 residues with WXG RN05_RS09505 PF06013 Proteins of 100 residues with WXG RN05_RS09510 PF14011 EspG family RN05_RS09515 PF08817 WXG100 protein secretion system (Wss), protein YukD RN05_RS09520 PF00082 Subtilase family RN05_RS09525 PF11203 Putative type VII ESX secretion system translocon, EccE RN05_RS09530 PF17866 AAA lid domain RN05_RS09530 PF00004 ATPase family associated with various cellular activities (AAA) RN05_RS09540 PF08237 PE-PPE domain RN05_RS09540 PF00823 PPE family RN05_RS09545 PF12484 Polymorphic PE/PPE proteins C terminal RN05_RS09545 PF00823 PPE family RN05_RS09550 PF00823 PPE family RN05_RS09550 PF12484 Polymorphic PE/PPE proteins C terminal RN05_RS09570 PF00934 PE family RN05_RS09575 PF00823 PPE family RN05_RS09575 PF12484 Polymorphic PE/PPE proteins C terminal RN05_RS09580 PF00823 PPE family RN05_RS09580 PF12484 Polymorphic PE/PPE proteins C terminal RN05_RS09585 PF12484 Polymorphic PE/PPE proteins C terminal RN05_RS09585 PF00823 PPE family RN05_RS09595 PF02308 MgtC family RN05_RS09600 PF07992 Pyridine nucleotide-disulphide oxidoreductase RN05_RS09605 PF13827 Domain of unknown function (DUF4189) RN05_RS09610 PF04116 Fatty acid hydroxylase superfamily RN05_RS09620 PF13305 Tetracyclin repressor-like, C-terminal domain RN05_RS09620 PF00440 Bacterial regulatory proteins, tetR family RN05_RS09630 PF00934 PE family RN05_RS09635 PF06472 ABC transporter transmembrane region 2 RN05_RS09635 PF00005 ABC transporter RN05_RS09640 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RN05_RS09640 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RN05_RS09640 PF00205 Thiamine pyrophosphate enzyme, central domain RN05_RS09645 PF07517 SecA DEAD-like domain RN05_RS09645 PF01043 SecA preprotein cross-linking domain RN05_RS09645 PF07516 SecA Wing and Scaffold domain RN05_RS09650 PF01066 CDP-alcohol phosphatidyltransferase RN05_RS09655 PF05949 Bacterial protein of unknown function (DUF881) RN05_RS09660 PF06947 Protein of unknown function (DUF1290) RN05_RS09665 PF05949 Bacterial protein of unknown function (DUF881) RN05_RS09670 PF01597 Glycine cleavage H-protein RN05_RS09675 PF00498 FHA domain RN05_RS09680 PF00376 MerR family regulatory protein RN05_RS09685 PF02577 Bifunctional nuclease RN05_RS09690 PF13411 MerR HTH family regulatory protein RN05_RS09695 PF02347 Glycine cleavage system P-protein RN05_RS09700 PF00561 alpha/beta hydrolase fold RN05_RS09705 PF12697 Alpha/beta hydrolase family RN05_RS09710 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain RN05_RS09710 PF02129 X-Pro dipeptidyl-peptidase (S15 family) RN05_RS09720 PF01274 Malate synthase RN05_RS09725 PF01850 PIN domain RN05_RS09735 PF00934 PE family RN05_RS09740 PF01595 Cyclin M transmembrane N-terminal domain RN05_RS09740 PF00571 CBS domain RN05_RS09745 PF03471 Transporter associated domain RN05_RS09745 PF00571 CBS domain RN05_RS09745 PF01595 Cyclin M transmembrane N-terminal domain RN05_RS09750 PF00478 IMP dehydrogenase / GMP reductase domain RN05_RS09750 PF00571 CBS domain RN05_RS09755 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RN05_RS09755 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain RN05_RS09765 PF03965 Penicillinase repressor RN05_RS09770 PF03061 Thioesterase superfamily RN05_RS09775 PF00547 Urease, gamma subunit RN05_RS09780 PF00699 Urease beta subunit RN05_RS09785 PF01979 Amidohydrolase family RN05_RS09785 PF00449 Urease alpha-subunit, N-terminal domain RN05_RS09790 PF01730 UreF RN05_RS09795 PF02492 CobW/HypB/UreG, nucleotide-binding domain RN05_RS09810 PF00296 Luciferase-like monooxygenase RN05_RS09825 PF00528 Binding-protein-dependent transport system inner membrane component RN05_RS09830 PF00005 ABC transporter RN05_RS09830 PF03459 TOBE domain RN05_RS09835 PF07174 Fibronectin-attachment protein (FAP) RN05_RS09845 PF08240 Alcohol dehydrogenase GroES-like domain RN05_RS09860 PF00106 short chain dehydrogenase RN05_RS09865 PF02515 CoA-transferase family III RN05_RS09870 PF00108 Thiolase, N-terminal domain RN05_RS09870 PF02803 Thiolase, C-terminal domain RN05_RS09880 PF07992 Pyridine nucleotide-disulphide oxidoreductase RN05_RS09880 PF14759 Reductase C-terminal RN05_RS09890 PF04075 F420H(2)-dependent quinone reductase RN05_RS09895 PF01070 FMN-dependent dehydrogenase RN05_RS09915 PF00210 Ferritin-like domain RN05_RS09920 PF07690 Major Facilitator Superfamily RN05_RS09925 PF00120 Glutamine synthetase, catalytic domain RN05_RS09925 PF03951 Glutamine synthetase, beta-Grasp domain RN05_RS09935 PF00067 Cytochrome P450 RN05_RS09940 PF05481 Mycobacterium 19 kDa lipoprotein antigen RN05_RS09945 PF00106 short chain dehydrogenase RN05_RS09955 PF06737 Transglycosylase-like domain RN05_RS09960 PF01817 Chorismate mutase type II RN05_RS09965 PF00756 Putative esterase RN05_RS10005 PF03060 Nitronate monooxygenase RN05_RS10010 PF08240 Alcohol dehydrogenase GroES-like domain RN05_RS10010 PF00107 Zinc-binding dehydrogenase RN05_RS10015 PF04072 Leucine carboxyl methyltransferase RN05_RS10020 PF02580 D-Tyr-tRNA(Tyr) deacylase RN05_RS10025 PF01910 Thiamine-binding protein RN05_RS10030 PF01661 Macro domain RN05_RS10035 PF00072 Response regulator receiver domain RN05_RS10035 PF00211 Adenylate and Guanylate cyclase catalytic domain RN05_RS10040 PF02464 Competence-damaged protein RN05_RS10040 PF00994 Probable molybdopterin binding domain RN05_RS10045 PF07690 Major Facilitator Superfamily RN05_RS10050 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV RN05_RS10055 PF01740 STAS domain RN05_RS10060 PF01266 FAD dependent oxidoreductase RN05_RS10075 PF00141 Peroxidase RN05_RS10080 PF01475 Ferric uptake regulator family RN05_RS10085 PF01161 Phosphatidylethanolamine-binding protein RN05_RS10090 PF01161 Phosphatidylethanolamine-binding protein RN05_RS10095 PF02801 Beta-ketoacyl synthase, C-terminal domain RN05_RS10095 PF08240 Alcohol dehydrogenase GroES-like domain RN05_RS10095 PF08659 KR domain RN05_RS10095 PF08990 Erythronolide synthase docking RN05_RS10095 PF00550 Phosphopantetheine attachment site RN05_RS10095 PF00698 Acyl transferase domain RN05_RS10095 PF14765 Polyketide synthase dehydratase RN05_RS10095 PF00109 Beta-ketoacyl synthase, N-terminal domain RN05_RS10095 PF16197 Ketoacyl-synthetase C-terminal extension RN05_RS10110 PF00463 Isocitrate lyase family RN05_RS10115 PF00463 Isocitrate lyase family RN05_RS10120 PF00823 PPE family RN05_RS10120 PF01469 Pentapeptide repeats (8 copies) RN05_RS10125 PF01469 Pentapeptide repeats (8 copies) RN05_RS10125 PF00823 PPE family RN05_RS10145 PF11954 Domain of unknown function (DUF3471) RN05_RS10145 PF00144 Beta-lactamase RN05_RS10150 PF00144 Beta-lactamase RN05_RS10160 PF00501 AMP-binding enzyme RN05_RS10165 PF09167 Domain of unknown function (DUF1942) RN05_RS10190 PF01965 DJ-1/PfpI family RN05_RS10190 PF12833 Helix-turn-helix domain RN05_RS10195 PF08534 Redoxin RN05_RS10200 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RN05_RS10200 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RN05_RS10200 PF02770 Acyl-CoA dehydrogenase, middle domain RN05_RS10210 PF00378 Enoyl-CoA hydratase/isomerase RN05_RS10215 PF00296 Luciferase-like monooxygenase RN05_RS10220 PF00970 Oxidoreductase FAD-binding domain RN05_RS10220 PF00175 Oxidoreductase NAD-binding domain RN05_RS10220 PF00111 2Fe-2S iron-sulfur cluster binding domain RN05_RS10225 PF00561 alpha/beta hydrolase fold RN05_RS10230 PF01613 Flavin reductase like domain RN05_RS10235 PF00925 GTP cyclohydrolase II RN05_RS10235 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase RN05_RS10245 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system RN05_RS10255 PF02810 SEC-C motif RN05_RS10255 PF01043 SecA preprotein cross-linking domain RN05_RS10255 PF07517 SecA DEAD-like domain RN05_RS10255 PF07516 SecA Wing and Scaffold domain RN05_RS10260 PF01844 HNH endonuclease RN05_RS10260 PF02720 Domain of unknown function (DUF222) RN05_RS10315 PF05973 Phage derived protein Gp49-like (DUF891) RN05_RS10320 PF01381 Helix-turn-helix RN05_RS10335 PF05016 ParE toxin of type II toxin-antitoxin system, parDE RN05_RS10340 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH RN05_RS10350 PF01850 PIN domain RN05_RS10360 PF00440 Bacterial regulatory proteins, tetR family RN05_RS10400 PF02470 MlaD protein RN05_RS10445 PF13520 Amino acid permease RN05_RS10450 PF11738 Protein of unknown function (DUF3298) RN05_RS10455 PF00268 Ribonucleotide reductase, small chain RN05_RS10460 PF01850 PIN domain RN05_RS10465 PF07704 Rv0623-like transcription factor RN05_RS10470 PF00934 PE family RN05_RS10475 PF01083 Cutinase RN05_RS10480 PF02594 Uncharacterised ACR, YggU family COG1872 RN05_RS10485 PF03466 LysR substrate binding domain RN05_RS10485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RN05_RS10490 PF01810 LysE type translocator RN05_RS10495 PF00553 Cellulose binding domain RN05_RS10500 PF00398 Ribosomal RNA adenine dimethylase RN05_RS10505 PF08808 RES domain RN05_RS10510 PF09722 Protein of unknown function (DUF2384) RN05_RS10525 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system RN05_RS10530 PF01402 Ribbon-helix-helix protein, copG family RN05_RS10540 PF07371 Protein of unknown function (DUF1490) RN05_RS10545 PF01022 Bacterial regulatory protein, arsR family RN05_RS10550 PF01814 Hemerythrin HHE cation binding domain RN05_RS10555 PF00582 Universal stress protein family RN05_RS10570 PF13520 Amino acid permease RN05_RS10580 PF01643 Acyl-ACP thioesterase RN05_RS10590 PF08241 Methyltransferase domain RN05_RS10600 PF00582 Universal stress protein family RN05_RS10605 PF03633 Glycosyl hydrolase family 65, C-terminal domain RN05_RS10605 PF03632 Glycosyl hydrolase family 65 central catalytic domain RN05_RS10605 PF03636 Glycosyl hydrolase family 65, N-terminal domain RN05_RS10605 PF02358 Trehalose-phosphatase RN05_RS10610 PF00037 4Fe-4S binding domain RN05_RS10615 PF13173 AAA domain RN05_RS10615 PF13635 Domain of unknown function (DUF4143) RN05_RS10620 PF09957 Bacterial antitoxin of type II TA system, VapB RN05_RS10625 PF01850 PIN domain RN05_RS10630 PF12802 MarR family RN05_RS10635 PF07166 Protein of unknown function (DUF1398) RN05_RS10665 PF04255 Protein of unknown function (DUF433) RN05_RS10670 PF18478 PIN like domain RN05_RS10680 PF13744 Helix-turn-helix domain RN05_RS10685 PF05973 Phage derived protein Gp49-like (DUF891) RN05_RS10700 PF08463 EcoEI R protein C-terminal RN05_RS10700 PF04851 Type III restriction enzyme, res subunit RN05_RS10700 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) RN05_RS10700 PF00271 Helicase conserved C-terminal domain RN05_RS10705 PF01545 Cation efflux family RN05_RS10705 PF16916 Dimerisation domain of Zinc Transporter RN05_RS10710 PF00582 Universal stress protein family RN05_RS10715 PF13492 GAF domain RN05_RS10715 PF13185 GAF domain RN05_RS10715 PF07730 Histidine kinase RN05_RS10715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RN05_RS10720 PF00582 Universal stress protein family RN05_RS10725 PF00294 pfkB family carbohydrate kinase RN05_RS10730 PF00156 Phosphoribosyl transferase domain RN05_RS10730 PF05139 Erythromycin esterase RN05_RS10735 PF00011 Hsp20/alpha crystallin family RN05_RS10750 PF01022 Bacterial regulatory protein, arsR family RN05_RS10765 PF01734 Patatin-like phospholipase RN05_RS10770 PF00005 ABC transporter RN05_RS10770 PF17912 MalK OB fold domain RN05_RS10775 PF00528 Binding-protein-dependent transport system inner membrane component RN05_RS10780 PF00528 Binding-protein-dependent transport system inner membrane component RN05_RS10785 PF01547 Bacterial extracellular solute-binding protein RN05_RS10795 PF00857 Isochorismatase family RN05_RS10805 PF00135 Carboxylesterase family RN05_RS10815 PF00391 PEP-utilising enzyme, mobile domain RN05_RS10815 PF01370 NAD dependent epimerase/dehydratase family RN05_RS10820 PF00550 Phosphopantetheine attachment site RN05_RS10820 PF08659 KR domain RN05_RS10820 PF14765 Polyketide synthase dehydratase RN05_RS10820 PF02801 Beta-ketoacyl synthase, C-terminal domain RN05_RS10820 PF16197 Ketoacyl-synthetase C-terminal extension RN05_RS10820 PF08240 Alcohol dehydrogenase GroES-like domain RN05_RS10820 PF00698 Acyl transferase domain RN05_RS10820 PF00109 Beta-ketoacyl synthase, N-terminal domain RN05_RS10830 PF13397 RNA polymerase-binding protein RN05_RS10835 PF00535 Glycosyl transferase family 2 RN05_RS10835 PF00795 Carbon-nitrogen hydrolase RN05_RS10840 PF00795 Carbon-nitrogen hydrolase RN05_RS10840 PF00535 Glycosyl transferase family 2 RN05_RS10845 PF07969 Amidohydrolase family RN05_RS10855 PF01738 Dienelactone hydrolase family RN05_RS10860 PF01084 Ribosomal protein S18 RN05_RS10865 PF00253 Ribosomal protein S14p/S29e RN05_RS10870 PF00471 Ribosomal protein L33 RN05_RS10875 PF00830 Ribosomal L28 family RN05_RS10880 PF01297 Zinc-uptake complex component A periplasmic RN05_RS10895 PF02514 CobN/Magnesium Chelatase RN05_RS10905 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system RN05_RS10910 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain RN05_RS10915 PF02570 Precorrin-8X methylmutase RN05_RS10920 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RN05_RS10925 PF13847 Methyltransferase domain RN05_RS10935 PF04542 Sigma-70 region 2 RN05_RS10935 PF08281 Sigma-70, region 4 RN05_RS10940 PF02571 Precorrin-6x reductase CbiJ/CobK RN05_RS10945 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RN05_RS10950 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RN05_RS10955 PF00106 short chain dehydrogenase RN05_RS10960 PF01243 Pyridoxamine 5'-phosphate oxidase RN05_RS10985 PF10817 Protein of unknown function (DUF2563) RN05_RS10990 PF06259 Alpha/beta hydrolase RN05_RS11000 PF18646 Family of unknown function (DUF5632) RN05_RS11000 PF18645 Family of unknown function (DUF5631) RN05_RS11020 PF18645 Family of unknown function (DUF5631) RN05_RS11020 PF18646 Family of unknown function (DUF5632) RN05_RS11040 PF13276 HTH-like domain RN05_RS11050 PF00069 Protein kinase domain RN05_RS11050 PF14032 PknH-like extracellular domain RN05_RS11055 PF00557 Metallopeptidase family M24 RN05_RS11055 PF01321 Creatinase/Prolidase N-terminal domain RN05_RS11060 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain RN05_RS11060 PF01367 5'-3' exonuclease, C-terminal SAM fold RN05_RS11065 PF14230 Domain of unknown function (DUF4333) RN05_RS11070 PF00271 Helicase conserved C-terminal domain RN05_RS11070 PF00270 DEAD/DEAH box helicase RN05_RS11070 PF08148 DSHCT (NUC185) domain RN05_RS11075 PF00902 Sec-independent protein translocase protein (TatC) RN05_RS11080 PF02416 mttA/Hcf106 family RN05_RS11085 PF13280 WYL domain RN05_RS11090 PF13280 WYL domain RN05_RS11095 PF03136 Pup-ligase protein RN05_RS11105 PF02720 Domain of unknown function (DUF222) RN05_RS11110 PF12419 SNF2 Helicase protein RN05_RS11110 PF00271 Helicase conserved C-terminal domain RN05_RS11110 PF00176 SNF2 family N-terminal domain RN05_RS11115 PF04434 SWIM zinc finger RN05_RS11120 PF01850 PIN domain RN05_RS11130 PF00227 Proteasome subunit RN05_RS11135 PF01527 Transposase RN05_RS11140 PF00665 Integrase core domain RN05_RS11140 PF13276 HTH-like domain RN05_RS11150 PF00823 PPE family RN05_RS11155 PF00227 Proteasome subunit RN05_RS11160 PF00227 Proteasome subunit RN05_RS11165 PF05639 Pup-like protein RN05_RS11170 PF03136 Pup-ligase protein RN05_RS11185 PF00004 ATPase family associated with various cellular activities (AAA) RN05_RS11185 PF17758 Proteasomal ATPase OB N-terminal domain RN05_RS11185 PF16450 Proteasomal ATPase OB C-terminal domain RN05_RS11200 PF08704 tRNA methyltransferase complex GCD14 subunit RN05_RS11215 PF08029 HisG, C-terminal domain RN05_RS11215 PF01634 ATP phosphoribosyltransferase RN05_RS11220 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase RN05_RS11225 PF00823 PPE family RN05_RS11230 PF02310 B12 binding domain RN05_RS11230 PF02607 B12 binding domain RN05_RS11230 PF02574 Homocysteine S-methyltransferase RN05_RS11230 PF00809 Pterin binding enzyme RN05_RS11230 PF02965 Vitamin B12 dependent methionine synthase, activation domain RN05_RS11245 PF00934 PE family RN05_RS11250 PF00324 Amino acid permease RN05_RS11265 PF01406 tRNA synthetases class I (C) catalytic domain RN05_RS11270 PF00459 Inositol monophosphatase family RN05_RS11295 PF02673 Bacitracin resistance protein BacA RN05_RS11315 PF01180 Dihydroorotate dehydrogenase RN05_RS11320 PF01161 Phosphatidylethanolamine-binding protein RN05_RS11325 PF07687 Peptidase dimerisation domain RN05_RS11325 PF01546 Peptidase family M20/M25/M40 RN05_RS11335 PF05016 ParE toxin of type II toxin-antitoxin system, parDE RN05_RS11345 PF05139 Erythromycin esterase RN05_RS11345 PF00156 Phosphoribosyl transferase domain RN05_RS11355 PF05103 DivIVA protein RN05_RS11365 PF04472 Cell division protein SepF RN05_RS11370 PF01168 Alanine racemase, N-terminal domain RN05_RS11375 PF02578 Multi-copper polyphenol oxidoreductase laccase RN05_RS11380 PF12327 FtsZ family, C-terminal domain RN05_RS11380 PF00091 Tubulin/FtsZ family, GTPase domain RN05_RS11385 PF08478 POTRA domain, FtsQ-type RN05_RS11385 PF03799 Cell division protein FtsQ RN05_RS11390 PF02875 Mur ligase family, glutamate ligase domain RN05_RS11390 PF08245 Mur ligase middle domain RN05_RS11390 PF01225 Mur ligase family, catalytic domain RN05_RS11395 PF04101 Glycosyltransferase family 28 C-terminal domain RN05_RS11395 PF03033 Glycosyltransferase family 28 N-terminal domain RN05_RS11400 PF01098 Cell cycle protein RN05_RS11405 PF08245 Mur ligase middle domain RN05_RS11405 PF02875 Mur ligase family, glutamate ligase domain RN05_RS11410 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 RN05_RS11410 PF00953 Glycosyl transferase family 4 RN05_RS11415 PF08245 Mur ligase middle domain RN05_RS11415 PF02875 Mur ligase family, glutamate ligase domain RN05_RS11415 PF01225 Mur ligase family, catalytic domain RN05_RS11420 PF08245 Mur ligase middle domain RN05_RS11420 PF01225 Mur ligase family, catalytic domain RN05_RS11420 PF02875 Mur ligase family, glutamate ligase domain RN05_RS11440 PF00296 Luciferase-like monooxygenase RN05_RS11450 PF00905 Penicillin binding protein transpeptidase domain RN05_RS11450 PF03717 Penicillin-binding Protein dimerisation domain RN05_RS11460 PF01795 MraW methylase family RN05_RS11465 PF02381 MraZ protein, putative antitoxin-like RN05_RS11470 PF00665 Integrase core domain RN05_RS11470 PF13276 HTH-like domain RN05_RS11475 PF01527 Transposase RN05_RS11500 PF00348 Polyprenyl synthetase RN05_RS11510 PF18367 Rv2175c C-terminal domain of unknown function RN05_RS11515 PF00069 Protein kinase domain RN05_RS11525 PF01474 Class-II DAHP synthetase family RN05_RS11530 PF16473 3' exoribonuclease, RNase T-like RN05_RS11540 PF09594 Glycosyltransferase family 87 RN05_RS11555 PF02374 Anion-transporting ATPase RN05_RS11570 PF00501 AMP-binding enzyme RN05_RS11575 PF13439 Glycosyltransferase Family 4 RN05_RS11575 PF00534 Glycosyl transferases group 1 RN05_RS11585 PF00877 NlpC/P60 family RN05_RS11595 PF01541 GIY-YIG catalytic domain RN05_RS11595 PF00929 Exonuclease RN05_RS11610 PF00510 Cytochrome c oxidase subunit III RN05_RS11615 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RN05_RS11615 PF00034 Cytochrome c RN05_RS11620 PF00355 Rieske [2Fe-2S] domain RN05_RS11625 PF13631 Cytochrome b(N-terminal)/b6/petB RN05_RS11630 PF10812 Protein of unknown function (DUF2561) RN05_RS11635 PF05423 Mycobacterium membrane protein RN05_RS11640 PF12270 Cytochrome c oxidase subunit IV RN05_RS11645 PF00116 Cytochrome C oxidase subunit II, periplasmic domain RN05_RS11650 PF00733 Asparagine synthase RN05_RS11650 PF13537 Glutamine amidotransferase domain RN05_RS11655 PF00294 pfkB family carbohydrate kinase RN05_RS11665 PF01521 Iron-sulphur cluster biosynthesis RN05_RS11670 PF02595 Glycerate kinase family RN05_RS11675 PF11241 Protein of unknown function (DUF3043) RN05_RS11680 PF02277 Phosphoribosyltransferase RN05_RS11685 PF02654 Cobalamin-5-phosphate synthase RN05_RS11695 PF01063 Amino-transferase class IV RN05_RS11700 PF01571 Aminomethyltransferase folate-binding domain RN05_RS11700 PF08669 Glycine cleavage T-protein C-terminal barrel domain RN05_RS11705 PF00211 Adenylate and Guanylate cyclase catalytic domain RN05_RS11705 PF16701 Adenylate cyclase regulatory domain RN05_RS11710 PF00883 Cytosol aminopeptidase family, catalytic domain RN05_RS11710 PF02789 Cytosol aminopeptidase family, N-terminal domain RN05_RS11715 PF00561 alpha/beta hydrolase fold RN05_RS11715 PF00106 short chain dehydrogenase RN05_RS11720 PF02817 e3 binding domain RN05_RS11720 PF00364 Biotin-requiring enzyme RN05_RS11720 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RN05_RS11725 PF08338 Domain of unknown function (DUF1731) RN05_RS11725 PF01370 NAD dependent epimerase/dehydratase family RN05_RS11730 PF03099 Biotin/lipoate A/B protein ligase family RN05_RS11735 PF04055 Radical SAM superfamily RN05_RS11735 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family RN05_RS11740 PF13829 Domain of unknown function (DUF4191) RN05_RS11750 PF00120 Glutamine synthetase, catalytic domain RN05_RS11750 PF03951 Glutamine synthetase, beta-Grasp domain RN05_RS11755 PF03710 Glutamate-ammonia ligase adenylyltransferase RN05_RS11755 PF08335 GlnD PII-uridylyltransferase RN05_RS11760 PF00120 Glutamine synthetase, catalytic domain RN05_RS11760 PF03951 Glutamine synthetase, beta-Grasp domain RN05_RS11765 PF08386 TAP-like protein RN05_RS11765 PF00561 alpha/beta hydrolase fold RN05_RS11770 PF00561 alpha/beta hydrolase fold RN05_RS11775 PF06974 Protein of unknown function (DUF1298) RN05_RS11775 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain RN05_RS11780 PF02548 Ketopantoate hydroxymethyltransferase RN05_RS11785 PF01928 CYTH domain RN05_RS11785 PF05235 CHAD domain RN05_RS11795 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA RN05_RS11800 PF00300 Histidine phosphatase superfamily (branch 1) RN05_RS11800 PF13456 Reverse transcriptase-like RN05_RS11805 PF02591 C4-type zinc ribbon domain RN05_RS11810 PF01784 NIF3 (NGG1p interacting factor 3) RN05_RS11815 PF00155 Aminotransferase class I and II RN05_RS11830 PF13419 Haloacid dehalogenase-like hydrolase RN05_RS11835 PF01451 Low molecular weight phosphotyrosine protein phosphatase RN05_RS11840 PF02104 SURF1 family RN05_RS11845 PF03186 CobD/Cbib protein RN05_RS11850 PF09995 Uncharacterized protein conserved in bacteria (DUF2236) RN05_RS11865 PF00578 AhpC/TSA family RN05_RS11870 PF11253 Protein of unknown function (DUF3052) RN05_RS11880 PF00456 Transketolase, thiamine diphosphate binding domain RN05_RS11880 PF17831 Pyruvate dehydrogenase E1 component middle domain RN05_RS11885 PF13556 PucR C-terminal helix-turn-helix domain RN05_RS11885 PF17853 GGDEF-like domain RN05_RS11890 PF00698 Acyl transferase domain RN05_RS11895 PF00550 Phosphopantetheine attachment site RN05_RS11900 PF00109 Beta-ketoacyl synthase, N-terminal domain RN05_RS11900 PF02801 Beta-ketoacyl synthase, C-terminal domain RN05_RS11905 PF00109 Beta-ketoacyl synthase, N-terminal domain RN05_RS11905 PF02801 Beta-ketoacyl synthase, C-terminal domain RN05_RS11910 PF01039 Carboxyl transferase domain RN05_RS11920 PF16901 C-terminal domain of alpha-glycerophosphate oxidase RN05_RS11920 PF01266 FAD dependent oxidoreductase RN05_RS11925 PF00440 Bacterial regulatory proteins, tetR family RN05_RS11930 PF01565 FAD binding domain RN05_RS11930 PF02913 FAD linked oxidases, C-terminal domain RN05_RS11935 PF00781 Diacylglycerol kinase catalytic domain RN05_RS11970 PF13847 Methyltransferase domain RN05_RS11975 PF08240 Alcohol dehydrogenase GroES-like domain RN05_RS11975 PF00107 Zinc-binding dehydrogenase RN05_RS11990 PF00106 short chain dehydrogenase RN05_RS12000 PF07690 Major Facilitator Superfamily RN05_RS12005 PF00067 Cytochrome P450 RN05_RS12015 PF00067 Cytochrome P450 RN05_RS12030 PF10905 Protein of unknown function (DUF2695) RN05_RS12035 PF02656 Domain of unknown function (DUF202) RN05_RS12040 PF02656 Domain of unknown function (DUF202) RN05_RS12050 PF16715 Cyclodipeptide synthase RN05_RS12055 PF00067 Cytochrome P450 RN05_RS12060 PF03009 Glycerophosphoryl diester phosphodiesterase family RN05_RS12065 PF01527 Transposase RN05_RS12070 PF13276 HTH-like domain RN05_RS12070 PF00665 Integrase core domain RN05_RS12075 PF02913 FAD linked oxidases, C-terminal domain RN05_RS12075 PF01565 FAD binding domain RN05_RS12080 PF01384 Phosphate transporter family RN05_RS12085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RN05_RS12085 PF03466 LysR substrate binding domain RN05_RS12095 PF07859 alpha/beta hydrolase fold RN05_RS12100 PF06974 Protein of unknown function (DUF1298) RN05_RS12100 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain RN05_RS12105 PF01323 DSBA-like thioredoxin domain RN05_RS12110 PF00999 Sodium/hydrogen exchanger family RN05_RS12120 PF02611 CDP-diacylglycerol pyrophosphatase RN05_RS12125 PF05481 Mycobacterium 19 kDa lipoprotein antigen RN05_RS12130 PF00581 Rhodanese-like domain RN05_RS12135 PF01048 Phosphorylase superfamily RN05_RS12140 PF01048 Phosphorylase superfamily RN05_RS12145 PF00155 Aminotransferase class I and II RN05_RS12150 PF03691 Uncharacterised protein family (UPF0167) RN05_RS12155 PF00561 alpha/beta hydrolase fold RN05_RS12165 PF00248 Aldo/keto reductase family RN05_RS12170 PF00183 Hsp90 protein RN05_RS12175 PF00753 Metallo-beta-lactamase superfamily RN05_RS12180 PF01083 Cutinase RN05_RS12185 PF08940 Domain of unknown function (DUF1918) RN05_RS12205 PF09335 SNARE associated Golgi protein RN05_RS12210 PF12146 Serine aminopeptidase, S33 RN05_RS12230 PF04255 Protein of unknown function (DUF433) RN05_RS12245 PF00589 Phage integrase family RN05_RS12245 PF02899 Phage integrase, N-terminal SAM-like domain RN05_RS12255 PF12728 Helix-turn-helix domain RN05_RS12285 PF00528 Binding-protein-dependent transport system inner membrane component RN05_RS12290 PF00528 Binding-protein-dependent transport system inner membrane component RN05_RS12300 PF00582 Universal stress protein family RN05_RS12305 PF13520 Amino acid permease RN05_RS12310 PF00202 Aminotransferase class-III RN05_RS12315 PF00202 Aminotransferase class-III RN05_RS12325 PF01037 Lrp/AsnC ligand binding domain RN05_RS12325 PF13404 AsnC-type helix-turn-helix domain RN05_RS12330 PF02361 Cobalt transport protein RN05_RS12335 PF00005 ABC transporter RN05_RS12350 PF00934 PE family RN05_RS12355 PF07690 Major Facilitator Superfamily RN05_RS12360 PF14041 LppP/LprE lipoprotein RN05_RS12375 PF03949 Malic enzyme, NAD binding domain RN05_RS12375 PF00390 Malic enzyme, N-terminal domain RN05_RS12380 PF07690 Major Facilitator Superfamily RN05_RS12385 PF00291 Pyridoxal-phosphate dependent enzyme RN05_RS12390 PF00132 Bacterial transferase hexapeptide (six repeats) RN05_RS12405 PF00899 ThiF family RN05_RS12410 PF03176 MMPL family RN05_RS12415 PF00934 PE family RN05_RS12435 PF13662 Toprim domain RN05_RS12435 PF08275 DNA primase catalytic core, N-terminal domain RN05_RS12435 PF01807 CHC2 zinc finger RN05_RS12435 PF10410 DnaB-helicase binding domain of primase RN05_RS12435 PF08278 DNA primase DnaG DnaB-binding RN05_RS12440 PF01966 HD domain RN05_RS12440 PF13286 Phosphohydrolase-associated domain RN05_RS12445 PF04536 TPM domain RN05_RS12450 PF06013 Proteins of 100 residues with WXG RN05_RS12455 PF06013 Proteins of 100 residues with WXG RN05_RS12465 PF04185 Phosphoesterase family RN05_RS12470 PF04185 Phosphoesterase family RN05_RS12475 PF04185 Phosphoesterase family RN05_RS12480 PF00823 PPE family RN05_RS12480 PF12484 Polymorphic PE/PPE proteins C terminal RN05_RS12485 PF06013 Proteins of 100 residues with WXG RN05_RS12490 PF06013 Proteins of 100 residues with WXG RN05_RS12495 PF00823 PPE family RN05_RS12495 PF12484 Polymorphic PE/PPE proteins C terminal RN05_RS12505 PF01527 Transposase RN05_RS12510 PF00665 Integrase core domain RN05_RS12510 PF13276 HTH-like domain RN05_RS12515 PF01469 Pentapeptide repeats (8 copies) RN05_RS12515 PF00823 PPE family RN05_RS12520 PF03129 Anticodon binding domain RN05_RS12520 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RN05_RS12525 PF01022 Bacterial regulatory protein, arsR family RN05_RS12530 PF01475 Ferric uptake regulator family RN05_RS12540 PF01255 Putative undecaprenyl diphosphate synthase RN05_RS12545 PF11967 Recombination protein O N terminal RN05_RS12545 PF02565 Recombination protein O C terminal RN05_RS12550 PF01425 Amidase RN05_RS12555 PF07650 KH domain RN05_RS12555 PF01926 50S ribosome-binding GTPase RN05_RS12565 PF01595 Cyclin M transmembrane N-terminal domain RN05_RS12565 PF03471 Transporter associated domain RN05_RS12565 PF00571 CBS domain RN05_RS12570 PF02130 Uncharacterized protein family UPF0054 RN05_RS12575 PF02562 PhoH-like protein RN05_RS12585 PF00934 PE family RN05_RS12590 PF04452 RNA methyltransferase RN05_RS12595 PF00226 DnaJ domain RN05_RS12595 PF00684 DnaJ central domain RN05_RS12595 PF01556 DnaJ C terminal domain RN05_RS12600 PF01628 HrcA protein C terminal domain RN05_RS12615 PF03621 MbtH-like protein RN05_RS12620 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) RN05_RS12625 PF00550 Phosphopantetheine attachment site RN05_RS12625 PF07993 Male sterility protein RN05_RS12625 PF00668 Condensation domain RN05_RS12625 PF13193 AMP-binding enzyme C-terminal domain RN05_RS12625 PF00501 AMP-binding enzyme RN05_RS12630 PF13193 AMP-binding enzyme C-terminal domain RN05_RS12630 PF00501 AMP-binding enzyme RN05_RS12630 PF00550 Phosphopantetheine attachment site RN05_RS12630 PF00975 Thioesterase domain RN05_RS12630 PF00668 Condensation domain RN05_RS12635 PF02801 Beta-ketoacyl synthase, C-terminal domain RN05_RS12635 PF00109 Beta-ketoacyl synthase, N-terminal domain RN05_RS12635 PF00975 Thioesterase domain RN05_RS12635 PF08659 KR domain RN05_RS12635 PF00550 Phosphopantetheine attachment site RN05_RS12635 PF16197 Ketoacyl-synthetase C-terminal extension RN05_RS12635 PF08990 Erythronolide synthase docking RN05_RS12635 PF00698 Acyl transferase domain RN05_RS12640 PF16197 Ketoacyl-synthetase C-terminal extension RN05_RS12640 PF00698 Acyl transferase domain RN05_RS12640 PF02801 Beta-ketoacyl synthase, C-terminal domain RN05_RS12640 PF08659 KR domain RN05_RS12640 PF00550 Phosphopantetheine attachment site RN05_RS12640 PF00109 Beta-ketoacyl synthase, N-terminal domain RN05_RS12640 PF14765 Polyketide synthase dehydratase RN05_RS12645 PF00668 Condensation domain RN05_RS12645 PF00550 Phosphopantetheine attachment site RN05_RS12645 PF00975 Thioesterase domain RN05_RS12645 PF00501 AMP-binding enzyme RN05_RS12645 PF13193 AMP-binding enzyme C-terminal domain RN05_RS12650 PF13193 AMP-binding enzyme C-terminal domain RN05_RS12650 PF00501 AMP-binding enzyme RN05_RS12660 PF00425 chorismate binding enzyme RN05_RS12675 PF04055 Radical SAM superfamily RN05_RS12680 PF06737 Transglycosylase-like domain RN05_RS12690 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain RN05_RS12690 PF01077 Nitrite and sulphite reductase 4Fe-4S domain RN05_RS12695 PF01507 Phosphoadenosine phosphosulfate reductase family RN05_RS12710 PF03169 OPT oligopeptide transporter protein RN05_RS12730 PF00005 ABC transporter RN05_RS12730 PF12857 TOBE-like domain RN05_RS12735 PF00528 Binding-protein-dependent transport system inner membrane component RN05_RS12740 PF00528 Binding-protein-dependent transport system inner membrane component RN05_RS12760 PF00723 Glycosyl hydrolases family 15 RN05_RS12770 PF00679 Elongation factor G C-terminus RN05_RS12770 PF06421 GTP-binding protein LepA C-terminus RN05_RS12770 PF00009 Elongation factor Tu GTP binding domain RN05_RS12785 PF12706 Beta-lactamase superfamily domain RN05_RS12795 PF08379 Bacterial transglutaminase-like N-terminal region RN05_RS12795 PF01841 Transglutaminase-like superfamily RN05_RS12805 PF04174 A circularly permuted ATPgrasp RN05_RS12810 PF01649 Ribosomal protein S20 RN05_RS12825 PF10531 SLBB domain RN05_RS12830 PF13530 Sterol carrier protein domain RN05_RS12830 PF17668 Acetyltransferase (GNAT) domain RN05_RS12835 PF02645 Uncharacterised protein, DegV family COG1307 RN05_RS12845 PF00300 Histidine phosphatase superfamily (branch 1) RN05_RS12855 PF01467 Cytidylyltransferase-like RN05_RS12890 PF07724 AAA domain (Cdc48 subfamily) RN05_RS12890 PF17871 AAA lid domain RN05_RS12890 PF10431 C-terminal, D2-small domain, of ClpB protein RN05_RS12890 PF00004 ATPase family associated with various cellular activities (AAA) RN05_RS12890 PF02861 Clp amino terminal domain, pathogenicity island component RN05_RS12895 PF00171 Aldehyde dehydrogenase family RN05_RS12900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RN05_RS12900 PF03466 LysR substrate binding domain RN05_RS12905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RN05_RS12905 PF03466 LysR substrate binding domain RN05_RS12910 PF00578 AhpC/TSA family RN05_RS12915 PF02627 Carboxymuconolactone decarboxylase family RN05_RS12920 PF00823 PPE family RN05_RS12925 PF00934 PE family RN05_RS12940 PF00924 Mechanosensitive ion channel RN05_RS12945 PF00672 HAMP domain RN05_RS12945 PF18698 Histidine kinase sensor domain RN05_RS12945 PF00512 His Kinase A (phospho-acceptor) domain RN05_RS12945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RN05_RS12950 PF00294 pfkB family carbohydrate kinase RN05_RS12960 PF02540 NAD synthase RN05_RS12960 PF00795 Carbon-nitrogen hydrolase RN05_RS12965 PF01472 PUA domain RN05_RS12965 PF00696 Amino acid kinase family RN05_RS12970 PF01926 50S ribosome-binding GTPase RN05_RS12970 PF01018 GTP1/OBG RN05_RS12970 PF09269 Domain of unknown function (DUF1967) RN05_RS12975 PF01016 Ribosomal L27 protein RN05_RS12980 PF00829 Ribosomal prokaryotic L21 protein RN05_RS12985 PF00375 Sodium:dicarboxylate symporter family RN05_RS12990 PF10150 Ribonuclease E/G family RN05_RS12995 PF00334 Nucleoside diphosphate kinase RN05_RS13005 PF08245 Mur ligase middle domain RN05_RS13005 PF02875 Mur ligase family, glutamate ligase domain RN05_RS13010 PF00133 tRNA synthetases class I (I, L, M and V) RN05_RS13010 PF10458 Valyl tRNA synthetase tRNA binding arm RN05_RS13010 PF08264 Anticodon-binding domain of tRNA RN05_RS13015 PF03435 Saccharopine dehydrogenase NADP binding domain RN05_RS13020 PF06737 Transglycosylase-like domain RN05_RS13035 PF12804 MobA-like NTP transferase domain RN05_RS13040 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RN05_RS13045 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase RN05_RS13045 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg RN05_RS13045 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II RN05_RS13050 PF07690 Major Facilitator Superfamily RN05_RS13055 PF07724 AAA domain (Cdc48 subfamily) RN05_RS13055 PF10431 C-terminal, D2-small domain, of ClpB protein RN05_RS13055 PF06689 ClpX C4-type zinc finger RN05_RS13060 PF02574 Homocysteine S-methyltransferase RN05_RS13065 PF07690 Major Facilitator Superfamily RN05_RS13070 PF00574 Clp protease RN05_RS13075 PF00574 Clp protease RN05_RS13080 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RN05_RS13080 PF05697 Bacterial trigger factor protein (TF) RN05_RS13080 PF05698 Bacterial trigger factor protein (TF) C-terminus RN05_RS13095 PF00144 Beta-lactamase RN05_RS13100 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain RN05_RS13100 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain RN05_RS13100 PF06827 Zinc finger found in FPG and IleRS RN05_RS13105 PF02502 Ribose/Galactose Isomerase RN05_RS13110 PF01323 DSBA-like thioredoxin domain RN05_RS13115 PF11838 ERAP1-like C-terminal domain RN05_RS13115 PF01433 Peptidase family M1 domain RN05_RS13120 PF17174 Domain of unknown function (DUF5130) RN05_RS13135 PF01152 Bacterial-like globin RN05_RS13140 PF00128 Alpha amylase, catalytic domain RN05_RS13160 PF03061 Thioesterase superfamily RN05_RS13165 PF05088 Bacterial NAD-glutamate dehydrogenase RN05_RS13170 PF12848 ABC transporter RN05_RS13170 PF00005 ABC transporter RN05_RS13180 PF13276 HTH-like domain RN05_RS13180 PF00665 Integrase core domain RN05_RS13185 PF01527 Transposase RN05_RS13195 PF01553 Acyltransferase RN05_RS13205 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain RN05_RS13205 PF06974 Protein of unknown function (DUF1298) RN05_RS13210 PF07859 alpha/beta hydrolase fold RN05_RS13220 PF00378 Enoyl-CoA hydratase/isomerase RN05_RS13225 PF00934 PE family RN05_RS13230 PF00196 Bacterial regulatory proteins, luxR family RN05_RS13265 PF01850 PIN domain RN05_RS13270 PF00364 Biotin-requiring enzyme RN05_RS13270 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RN05_RS13270 PF02817 e3 binding domain RN05_RS13275 PF02779 Transketolase, pyrimidine binding domain RN05_RS13275 PF02780 Transketolase, C-terminal domain RN05_RS13280 PF00676 Dehydrogenase E1 component RN05_RS13285 PF03328 HpcH/HpaI aldolase/citrate lyase family RN05_RS13290 PF01575 MaoC like domain RN05_RS13295 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RN05_RS13295 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RN05_RS13295 PF02770 Acyl-CoA dehydrogenase, middle domain RN05_RS13300 PF02785 Biotin carboxylase C-terminal domain RN05_RS13300 PF00289 Biotin carboxylase, N-terminal domain RN05_RS13300 PF00364 Biotin-requiring enzyme RN05_RS13300 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RN05_RS13305 PF01039 Carboxyl transferase domain RN05_RS13310 PF01144 Coenzyme A transferase RN05_RS13315 PF01144 Coenzyme A transferase RN05_RS13320 PF13193 AMP-binding enzyme C-terminal domain RN05_RS13320 PF00501 AMP-binding enzyme RN05_RS13340 PF00106 short chain dehydrogenase RN05_RS13345 PF05872 Bacterial protein of unknown function (DUF853) RN05_RS13350 PF00929 Exonuclease RN05_RS13360 PF00872 Transposase, Mutator family RN05_RS13400 PF03734 L,D-transpeptidase catalytic domain RN05_RS13400 PF17964 Bacterial Ig domain RN05_RS13410 PF00934 PE family RN05_RS13420 PF00578 AhpC/TSA family RN05_RS13425 PF01546 Peptidase family M20/M25/M40 RN05_RS13425 PF07687 Peptidase dimerisation domain RN05_RS13430 PF01648 4'-phosphopantetheinyl transferase superfamily RN05_RS13435 PF00109 Beta-ketoacyl synthase, N-terminal domain RN05_RS13435 PF02801 Beta-ketoacyl synthase, C-terminal domain RN05_RS13440 PF08924 Domain of unknown function (DUF1906) RN05_RS13445 PF09957 Bacterial antitoxin of type II TA system, VapB RN05_RS13450 PF01850 PIN domain RN05_RS13455 PF04471 Restriction endonuclease RN05_RS13455 PF14338 Mrr N-terminal domain RN05_RS13460 PF07669 Eco57I restriction-modification methylase RN05_RS13465 PF01850 PIN domain RN05_RS13475 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain RN05_RS13475 PF01276 Orn/Lys/Arg decarboxylase, major domain RN05_RS13475 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain RN05_RS13485 PF01029 NusB family RN05_RS13490 PF01132 Elongation factor P (EF-P) OB domain RN05_RS13490 PF08207 Elongation factor P (EF-P) KOW-like domain RN05_RS13490 PF09285 Elongation factor P, C-terminal RN05_RS13495 PF01321 Creatinase/Prolidase N-terminal domain RN05_RS13495 PF00557 Metallopeptidase family M24 RN05_RS13505 PF01220 Dehydroquinase class II RN05_RS13510 PF01761 3-dehydroquinate synthase RN05_RS13515 PF01202 Shikimate kinase RN05_RS13520 PF01264 Chorismate synthase RN05_RS13530 PF06259 Alpha/beta hydrolase RN05_RS13535 PF16708 Lipoprotein confined to pathogenic Mycobacterium RN05_RS13540 PF16708 Lipoprotein confined to pathogenic Mycobacterium RN05_RS13545 PF09957 Bacterial antitoxin of type II TA system, VapB RN05_RS13550 PF01850 PIN domain RN05_RS13555 PF01402 Ribbon-helix-helix protein, copG family RN05_RS13560 PF01850 PIN domain RN05_RS13570 PF01850 PIN domain RN05_RS13575 PF01402 Ribbon-helix-helix protein, copG family RN05_RS13585 PF08501 Shikimate dehydrogenase substrate binding domain RN05_RS13585 PF18317 Shikimate 5'-dehydrogenase C-terminal domain RN05_RS13590 PF02618 YceG-like family RN05_RS13595 PF03652 Holliday junction resolvase RN05_RS13600 PF01411 tRNA synthetases class II (A) RN05_RS13600 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RN05_RS13600 PF02272 DHHA1 domain RN05_RS13605 PF01894 Uncharacterised protein family UPF0047 RN05_RS13620 PF12002 MgsA AAA+ ATPase C terminal RN05_RS13620 PF00004 ATPase family associated with various cellular activities (AAA) RN05_RS13620 PF16193 AAA C-terminal domain RN05_RS13635 PF10851 Protein of unknown function (DUF2652) RN05_RS13640 PF10851 Protein of unknown function (DUF2652) RN05_RS13650 PF00027 Cyclic nucleotide-binding domain RN05_RS13650 PF00005 ABC transporter RN05_RS13655 PF01734 Patatin-like phospholipase RN05_RS13655 PF00027 Cyclic nucleotide-binding domain RN05_RS13665 PF14403 Circularly permuted ATP-grasp type 2 RN05_RS13665 PF04168 A predicted alpha-helical domain with a conserved ER motif. RN05_RS13670 PF15887 Putative zinc-binding metallo-peptidase RN05_RS13670 PF10005 zinc-ribbon domain RN05_RS13675 PF08379 Bacterial transglutaminase-like N-terminal region RN05_RS13675 PF01841 Transglutaminase-like superfamily RN05_RS13690 PF02938 GAD domain RN05_RS13690 PF00152 tRNA synthetases class II (D, K and N) RN05_RS13690 PF01336 OB-fold nucleic acid binding domain RN05_RS13695 PF08546 Ketopantoate reductase PanE/ApbA C terminal RN05_RS13695 PF02558 Ketopantoate reductase PanE/ApbA RN05_RS13700 PF10604 Polyketide cyclase / dehydrase and lipid transport RN05_RS13705 PF04228 Putative neutral zinc metallopeptidase RN05_RS13715 PF16656 Purple acid Phosphatase, N-terminal domain RN05_RS13715 PF00149 Calcineurin-like phosphoesterase RN05_RS13720 PF04055 Radical SAM superfamily RN05_RS13725 PF00561 alpha/beta hydrolase fold RN05_RS13730 PF03129 Anticodon binding domain RN05_RS13730 PF13393 Histidyl-tRNA synthetase RN05_RS13735 PF00753 Metallo-beta-lactamase superfamily RN05_RS13740 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RN05_RS13745 PF02824 TGS domain RN05_RS13745 PF04607 Region found in RelA / SpoT proteins RN05_RS13745 PF13291 ACT domain RN05_RS13750 PF00156 Phosphoribosyl transferase domain RN05_RS13755 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RN05_RS13760 PF07549 SecD/SecF GG Motif RN05_RS13760 PF02355 Protein export membrane protein RN05_RS13765 PF07549 SecD/SecF GG Motif RN05_RS13765 PF02355 Protein export membrane protein RN05_RS13770 PF02699 Preprotein translocase subunit RN05_RS13775 PF00202 Aminotransferase class-III RN05_RS13780 PF00501 AMP-binding enzyme RN05_RS13780 PF07993 Male sterility protein RN05_RS13780 PF00550 Phosphopantetheine attachment site RN05_RS13785 PF00934 PE family RN05_RS13790 PF17864 RuvB AAA lid domain RN05_RS13790 PF05491 RuvB C-terminal winged helix domain RN05_RS13790 PF05496 Holliday junction DNA helicase RuvB P-loop domain RN05_RS13795 PF07499 RuvA, C-terminal domain RN05_RS13795 PF01330 RuvA N terminal domain RN05_RS13800 PF02075 Crossover junction endodeoxyribonuclease RuvC RN05_RS13805 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin RN05_RS13810 PF01850 PIN domain RN05_RS13815 PF13785 Domain of unknown function (DUF4178) RN05_RS13820 PF10936 Protein of unknown function DUF2617 RN05_RS13825 PF14042 Domain of unknown function (DUF4247) RN05_RS13830 PF03994 Domain of Unknown Function (DUF350) RN05_RS13845 PF01850 PIN domain RN05_RS13850 PF01709 Transcriptional regulator RN05_RS13855 PF01174 SNO glutamine amidotransferase family RN05_RS13865 PF01680 SOR/SNZ family RN05_RS13870 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region RN05_RS13870 PF01243 Pyridoxamine 5'-phosphate oxidase RN05_RS13875 PF00823 PPE family RN05_RS13875 PF08237 PE-PPE domain RN05_RS13880 PF03099 Biotin/lipoate A/B protein ligase family RN05_RS13880 PF00293 NUDIX domain RN05_RS13885 PF13439 Glycosyltransferase Family 4 RN05_RS13890 PF03279 Bacterial lipid A biosynthesis acyltransferase RN05_RS13895 PF01066 CDP-alcohol phosphatidyltransferase RN05_RS13900 PF01230 HIT domain RN05_RS13905 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RN05_RS13905 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RN05_RS13905 PF03129 Anticodon binding domain RN05_RS13915 PF01436 NHL repeat RN05_RS13915 PF00934 PE family RN05_RS13920 PF09348 Domain of unknown function (DUF1990) RN05_RS13955 PF00582 Universal stress protein family RN05_RS13960 PF00582 Universal stress protein family RN05_RS13965 PF00571 CBS domain RN05_RS13965 PF02163 Peptidase family M50 RN05_RS13970 PF00571 CBS domain RN05_RS13985 PF18844 Bacterial archaeo-eukaryotic release factor family 2 RN05_RS13990 PF01951 Archease protein family (MTH1598/TM1083) RN05_RS13995 PF01139 tRNA-splicing ligase RtcB RN05_RS14000 PF08962 Domain of unknown function (DUF1876) RN05_RS14005 PF01814 Hemerythrin HHE cation binding domain RN05_RS14015 PF00934 PE family RN05_RS14030 PF09335 SNARE associated Golgi protein RN05_RS14035 PF01740 STAS domain RN05_RS14040 PF02694 Uncharacterised BCR, YnfA/UPF0060 family RN05_RS14050 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RN05_RS14060 PF01758 Sodium Bile acid symporter family RN05_RS14065 PF11455 Protein of unknown function (DUF3018) RN05_RS14095 PF00589 Phage integrase family RN05_RS14095 PF02899 Phage integrase, N-terminal SAM-like domain RN05_RS14105 PF01527 Transposase RN05_RS14110 PF00665 Integrase core domain RN05_RS14110 PF13276 HTH-like domain RN05_RS14145 PF10888 Protein of unknown function (DUF2742) RN05_RS14160 PF14659 Phage integrase, N-terminal SAM-like domain RN05_RS14160 PF00589 Phage integrase family RN05_RS14190 PF00872 Transposase, Mutator family RN05_RS14195 PF02861 Clp amino terminal domain, pathogenicity island component RN05_RS14205 PF00583 Acetyltransferase (GNAT) family RN05_RS14225 PF09594 Glycosyltransferase family 87 RN05_RS14230 PF01641 SelR domain RN05_RS14235 PF13847 Methyltransferase domain RN05_RS14240 PF06778 Chlorite dismutase RN05_RS14245 PF01593 Flavin containing amine oxidoreductase RN05_RS14250 PF01208 Uroporphyrinogen decarboxylase (URO-D) RN05_RS14255 PF00378 Enoyl-CoA hydratase/isomerase RN05_RS14270 PF02779 Transketolase, pyrimidine binding domain RN05_RS14270 PF02780 Transketolase, C-terminal domain RN05_RS14270 PF13292 1-deoxy-D-xylulose-5-phosphate synthase RN05_RS14280 PF03600 Citrate transporter RN05_RS14285 PF03600 Citrate transporter RN05_RS14300 PF00005 ABC transporter RN05_RS14305 PF05958 tRNA (Uracil-5-)-methyltransferase RN05_RS14305 PF01938 TRAM domain RN05_RS14310 PF13520 Amino acid permease RN05_RS14315 PF02080 TrkA-C domain RN05_RS14315 PF02254 TrkA-N domain RN05_RS14320 PF02080 TrkA-C domain RN05_RS14320 PF02254 TrkA-N domain RN05_RS14345 PF00692 dUTPase RN05_RS14365 PF00459 Inositol monophosphatase family RN05_RS14370 PF00480 ROK family RN05_RS14375 PF00140 Sigma-70 factor, region 1.2 RN05_RS14375 PF04542 Sigma-70 region 2 RN05_RS14375 PF04539 Sigma-70 region 3 RN05_RS14375 PF04545 Sigma-70, region 4 RN05_RS14410 PF04542 Sigma-70 region 2 RN05_RS14410 PF00140 Sigma-70 factor, region 1.2 RN05_RS14410 PF04545 Sigma-70, region 4 RN05_RS14410 PF04539 Sigma-70 region 3 RN05_RS14415 PF18357 Diphteria toxin repressor SH3 domain RN05_RS14415 PF01325 Iron dependent repressor, N-terminal DNA binding domain RN05_RS14415 PF02742 Iron dependent repressor, metal binding and dimerisation domain RN05_RS14425 PF07992 Pyridine nucleotide-disulphide oxidoreductase RN05_RS14425 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RN05_RS14435 PF12697 Alpha/beta hydrolase family RN05_RS14440 PF02567 Phenazine biosynthesis-like protein RN05_RS14445 PF08768 Domain of unknown function (DUF1794) RN05_RS14450 PF03477 ATP cone domain RN05_RS14455 PF01476 LysM domain RN05_RS14460 PF00717 Peptidase S24-like RN05_RS14460 PF01726 LexA DNA binding domain RN05_RS14475 PF03741 Integral membrane protein TerC family RN05_RS14480 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RN05_RS14480 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RN05_RS14480 PF02770 Acyl-CoA dehydrogenase, middle domain RN05_RS14485 PF01926 50S ribosome-binding GTPase RN05_RS14485 PF13167 GTP-binding GTPase N-terminal RN05_RS14485 PF16360 GTP-binding GTPase Middle Region RN05_RS14490 PF01678 Diaminopimelate epimerase RN05_RS14515 PF03993 Domain of Unknown Function (DUF349) RN05_RS14520 PF00919 Uncharacterized protein family UPF0004 RN05_RS14520 PF04055 Radical SAM superfamily RN05_RS14525 PF00919 Uncharacterized protein family UPF0004 RN05_RS14525 PF04055 Radical SAM superfamily RN05_RS14535 PF02631 RecX family RN05_RS14540 PF00154 recA bacterial DNA recombination protein RN05_RS14540 PF14528 LAGLIDADG-like domain RN05_RS14550 PF11248 Protein of unknown function (DUF3046) RN05_RS14560 PF07858 Limonene-1,2-epoxide hydrolase catalytic domain RN05_RS14565 PF00934 PE family RN05_RS14575 PF17240 Family of unknown function (DUF5313) RN05_RS14585 PF04012 PspA/IM30 family RN05_RS14595 PF01066 CDP-alcohol phosphatidyltransferase RN05_RS14600 PF00583 Acetyltransferase (GNAT) family RN05_RS14605 PF13491 4TM region of DNA translocase FtsK/SpoIIIE RN05_RS14605 PF17854 FtsK alpha domain RN05_RS14605 PF09397 Ftsk gamma domain RN05_RS14605 PF01580 FtsK/SpoIIIE family RN05_RS14620 PF04072 Leucine carboxyl methyltransferase RN05_RS14625 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain RN05_RS14625 PF12706 Beta-lactamase superfamily domain RN05_RS14625 PF17770 Ribonuclease J C-terminal domain RN05_RS14630 PF00701 Dihydrodipicolinate synthetase family RN05_RS14635 PF02511 Thymidylate synthase complementing protein RN05_RS14645 PF02384 N-6 DNA Methylase RN05_RS14650 PF01850 PIN domain RN05_RS14655 PF09957 Bacterial antitoxin of type II TA system, VapB RN05_RS14660 PF01850 PIN domain RN05_RS14665 PF07704 Rv0623-like transcription factor RN05_RS14680 PF00186 Dihydrofolate reductase RN05_RS14685 PF00303 Thymidylate synthase RN05_RS14705 PF00823 PPE family RN05_RS14705 PF12484 Polymorphic PE/PPE proteins C terminal RN05_RS14710 PF00934 PE family RN05_RS14715 PF12484 Polymorphic PE/PPE proteins C terminal RN05_RS14715 PF00823 PPE family RN05_RS14730 PF05173 Dihydrodipicolinate reductase, C-terminus RN05_RS14730 PF01113 Dihydrodipicolinate reductase, N-terminus RN05_RS14745 PF00175 Oxidoreductase NAD-binding domain RN05_RS14745 PF00111 2Fe-2S iron-sulfur cluster binding domain RN05_RS14745 PF00970 Oxidoreductase FAD-binding domain RN05_RS14760 PF01037 Lrp/AsnC ligand binding domain RN05_RS14765 PF01262 Alanine dehydrogenase/PNT, C-terminal domain RN05_RS14765 PF05222 Alanine dehydrogenase/PNT, N-terminal domain RN05_RS14770 PF03060 Nitronate monooxygenase RN05_RS14775 PF05193 Peptidase M16 inactive domain RN05_RS14775 PF00675 Insulinase (Peptidase family M16) RN05_RS14780 PF01138 3' exoribonuclease family, domain 1 RN05_RS14780 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain RN05_RS14780 PF00013 KH domain RN05_RS14780 PF00575 S1 RNA binding domain RN05_RS14790 PF00312 Ribosomal protein S15 RN05_RS14795 PF06574 FAD synthetase RN05_RS14795 PF01687 Riboflavin kinase RN05_RS14810 PF02770 Acyl-CoA dehydrogenase, middle domain RN05_RS14810 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RN05_RS14810 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RN05_RS14815 PF00108 Thiolase, N-terminal domain RN05_RS14815 PF02803 Thiolase, C-terminal domain RN05_RS14820 PF01385 Probable transposase RN05_RS14820 PF07282 Putative transposase DNA-binding domain RN05_RS14820 PF12323 Helix-turn-helix domain RN05_RS14825 PF00239 Resolvase, N terminal domain RN05_RS14830 PF16198 tRNA pseudouridylate synthase B C-terminal domain RN05_RS14830 PF09142 tRNA Pseudouridine synthase II, C terminal RN05_RS14830 PF01509 TruB family pseudouridylate synthase (N terminal domain) RN05_RS14835 PF17837 4'-phosphopantetheinyl transferase N-terminal domain RN05_RS14835 PF01648 4'-phosphopantetheinyl transferase superfamily RN05_RS14840 PF00149 Calcineurin-like phosphoesterase RN05_RS14870 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system RN05_RS14875 PF01402 Ribbon-helix-helix protein, copG family RN05_RS14940 PF00665 Integrase core domain RN05_RS14940 PF13276 HTH-like domain RN05_RS14945 PF01527 Transposase RN05_RS14950 PF09827 CRISPR associated protein Cas2 RN05_RS14955 PF01867 CRISPR associated protein Cas1 RN05_RS14960 PF09659 CRISPR-associated protein (Cas_Csm6) RN05_RS14965 PF03787 RAMP superfamily RN05_RS14970 PF17953 CRISPR Csm4 C-terminal domain RN05_RS14975 PF03787 RAMP superfamily RN05_RS14980 PF03750 Csm2 Type III-A RN05_RS14985 PF18211 Csm1 subunit domain B RN05_RS14990 PF10040 CRISPR-associated endoribonuclease Cas6 RN05_RS15020 PF01850 PIN domain RN05_RS15025 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system RN05_RS15030 PF00378 Enoyl-CoA hydratase/isomerase RN05_RS15035 PF17912 MalK OB fold domain RN05_RS15035 PF00005 ABC transporter RN05_RS15040 PF13416 Bacterial extracellular solute-binding protein RN05_RS15045 PF00528 Binding-protein-dependent transport system inner membrane component RN05_RS15050 PF00528 Binding-protein-dependent transport system inner membrane component RN05_RS15060 PF02272 DHHA1 domain RN05_RS15060 PF01368 DHH family RN05_RS15065 PF02033 Ribosome-binding factor A RN05_RS15070 PF00009 Elongation factor Tu GTP binding domain RN05_RS15070 PF04760 Translation initiation factor IF-2, N-terminal region RN05_RS15070 PF11987 Translation-initiation factor 2 RN05_RS15080 PF08529 NusA N-terminal domain RN05_RS15080 PF13184 NusA-like KH domain RN05_RS15085 PF02576 RimP N-terminal domain RN05_RS15085 PF17384 RimP C-terminal SH3 domain RN05_RS15100 PF03129 Anticodon binding domain RN05_RS15100 PF04073 Aminoacyl-tRNA editing domain RN05_RS15100 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RN05_RS15105 PF07690 Major Facilitator Superfamily RN05_RS15110 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RN05_RS15110 PF10414 Sirohaem synthase dimerisation region RN05_RS15115 PF07685 CobB/CobQ-like glutamine amidotransferase domain RN05_RS15115 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RN05_RS15120 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP RN05_RS15120 PF12557 Cob(I)alamin adenosyltransferase N terminal RN05_RS15125 PF07728 AAA domain (dynein-related subfamily) RN05_RS15125 PF13519 von Willebrand factor type A domain RN05_RS15125 PF17863 AAA lid domain RN05_RS15130 PF13673 Acetyltransferase (GNAT) domain RN05_RS15135 PF06039 Malate:quinone oxidoreductase (Mqo) RN05_RS15150 PF07992 Pyridine nucleotide-disulphide oxidoreductase RN05_RS15150 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RN05_RS15155 PF03824 High-affinity nickel-transport protein RN05_RS15160 PF02492 CobW/HypB/UreG, nucleotide-binding domain RN05_RS15165 PF02492 CobW/HypB/UreG, nucleotide-binding domain RN05_RS15175 PF00171 Aldehyde dehydrogenase family RN05_RS15180 PF07722 Peptidase C26 RN05_RS15185 PF00120 Glutamine synthetase, catalytic domain RN05_RS15190 PF00557 Metallopeptidase family M24 RN05_RS15205 PF01850 PIN domain RN05_RS15215 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system RN05_RS15220 PF05016 ParE toxin of type II toxin-antitoxin system, parDE RN05_RS15230 PF04551 GcpE protein RN05_RS15235 PF17820 PDZ domain RN05_RS15235 PF02163 Peptidase family M50 RN05_RS15240 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain RN05_RS15240 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase RN05_RS15240 PF13288 DXP reductoisomerase C-terminal domain RN05_RS15245 PF01402 Ribbon-helix-helix protein, copG family RN05_RS15250 PF01850 PIN domain RN05_RS15255 PF02469 Fasciclin domain RN05_RS15260 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system RN05_RS15265 PF00578 AhpC/TSA family RN05_RS15265 PF17991 Thioredoxin like C-terminal domain RN05_RS15265 PF02683 Cytochrome C biogenesis protein transmembrane region RN05_RS15270 PF02469 Fasciclin domain RN05_RS15275 PF10939 Protein of unknown function (DUF2631) RN05_RS15280 PF02683 Cytochrome C biogenesis protein transmembrane region RN05_RS15285 PF00578 AhpC/TSA family RN05_RS15290 PF04055 Radical SAM superfamily RN05_RS15295 PF04055 Radical SAM superfamily RN05_RS15305 PF01765 Ribosome recycling factor RN05_RS15310 PF00696 Amino acid kinase family RN05_RS15315 PF00486 Transcriptional regulatory protein, C terminal RN05_RS15320 PF07282 Putative transposase DNA-binding domain RN05_RS15320 PF01385 Probable transposase RN05_RS15320 PF12323 Helix-turn-helix domain RN05_RS15325 PF00239 Resolvase, N terminal domain RN05_RS15330 PF01047 MarR family RN05_RS15335 PF01425 Amidase RN05_RS15340 PF00889 Elongation factor TS RN05_RS15345 PF00318 Ribosomal protein S2 RN05_RS15350 PF00823 PPE family RN05_RS15350 PF12484 Polymorphic PE/PPE proteins C terminal RN05_RS15360 PF00589 Phage integrase family RN05_RS15360 PF02899 Phage integrase, N-terminal SAM-like domain RN05_RS15365 PF08021 Siderophore-interacting FAD-binding domain RN05_RS15365 PF04954 Siderophore-interacting protein RN05_RS15370 PF02481 DNA recombination-mediator protein A RN05_RS15370 PF17782 DprA winged helix domain RN05_RS15375 PF13335 Magnesium chelatase, subunit ChlI C-terminal RN05_RS15375 PF01078 Magnesium chelatase, subunit ChlI RN05_RS15380 PF02021 Uncharacterised protein family UPF0102 RN05_RS15385 PF02634 FdhD/NarQ family RN05_RS15390 PF00384 Molybdopterin oxidoreductase RN05_RS15390 PF01568 Molydopterin dinucleotide binding domain RN05_RS15395 PF10611 Protein of unknown function (DUF2469) RN05_RS15400 PF01351 Ribonuclease HII RN05_RS15405 PF10502 Signal peptidase, peptidase S26 RN05_RS15410 PF01245 Ribosomal protein L19 RN05_RS15420 PF01746 tRNA (Guanine-1)-methyltransferase RN05_RS15425 PF01782 RimM N-terminal domain RN05_RS15425 PF05239 PRC-barrel domain RN05_RS15435 PF00886 Ribosomal protein S16 RN05_RS15440 PF13577 SnoaL-like domain RN05_RS15445 PF00768 D-alanyl-D-alanine carboxypeptidase RN05_RS15450 PF00440 Bacterial regulatory proteins, tetR family RN05_RS15455 PF07969 Amidohydrolase family RN05_RS15460 PF00069 Protein kinase domain RN05_RS15465 PF01979 Amidohydrolase family RN05_RS15470 PF02978 Signal peptide binding domain RN05_RS15470 PF02881 SRP54-type protein, helical bundle domain RN05_RS15470 PF00448 SRP54-type protein, GTPase domain RN05_RS15475 PF04851 Type III restriction enzyme, res subunit RN05_RS15480 PF08335 GlnD PII-uridylyltransferase RN05_RS15480 PF01966 HD domain RN05_RS15485 PF00543 Nitrogen regulatory protein P-II RN05_RS15490 PF00909 Ammonium Transporter Family RN05_RS15495 PF00448 SRP54-type protein, GTPase domain RN05_RS15495 PF02881 SRP54-type protein, helical bundle domain RN05_RS15500 PF06470 SMC proteins Flexible Hinge Domain RN05_RS15500 PF02463 RecF/RecN/SMC N terminal domain RN05_RS15505 PF00708 Acylphosphatase RN05_RS15510 PF02566 OsmC-like protein RN05_RS15515 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain RN05_RS15515 PF06827 Zinc finger found in FPG and IleRS RN05_RS15515 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain RN05_RS15520 PF00035 Double-stranded RNA binding motif RN05_RS15520 PF14622 Ribonuclease-III-like RN05_RS15525 PF02620 Large ribosomal RNA subunit accumulation protein YceD RN05_RS15535 PF00975 Thioesterase domain RN05_RS15545 PF00501 AMP-binding enzyme RN05_RS15550 PF02801 Beta-ketoacyl synthase, C-terminal domain RN05_RS15550 PF00109 Beta-ketoacyl synthase, N-terminal domain RN05_RS15550 PF16197 Ketoacyl-synthetase C-terminal extension RN05_RS15550 PF00550 Phosphopantetheine attachment site RN05_RS15550 PF14765 Polyketide synthase dehydratase RN05_RS15550 PF08659 KR domain RN05_RS15550 PF00698 Acyl transferase domain RN05_RS15555 PF00698 Acyl transferase domain RN05_RS15555 PF00109 Beta-ketoacyl synthase, N-terminal domain RN05_RS15555 PF02801 Beta-ketoacyl synthase, C-terminal domain RN05_RS15555 PF08659 KR domain RN05_RS15555 PF00550 Phosphopantetheine attachment site RN05_RS15555 PF16197 Ketoacyl-synthetase C-terminal extension RN05_RS15565 PF00550 Phosphopantetheine attachment site RN05_RS15565 PF14765 Polyketide synthase dehydratase RN05_RS15565 PF02801 Beta-ketoacyl synthase, C-terminal domain RN05_RS15565 PF00109 Beta-ketoacyl synthase, N-terminal domain RN05_RS15565 PF08659 KR domain RN05_RS15565 PF16197 Ketoacyl-synthetase C-terminal extension RN05_RS15565 PF00698 Acyl transferase domain RN05_RS15570 PF02801 Beta-ketoacyl synthase, C-terminal domain RN05_RS15570 PF00668 Condensation domain RN05_RS15570 PF00550 Phosphopantetheine attachment site RN05_RS15570 PF00698 Acyl transferase domain RN05_RS15570 PF00109 Beta-ketoacyl synthase, N-terminal domain RN05_RS15570 PF16197 Ketoacyl-synthetase C-terminal extension RN05_RS15575 PF00005 ABC transporter RN05_RS15590 PF16911 Phthiocerol/phthiodiolone dimycocerosyl transferase C-terminus RN05_RS15595 PF16197 Ketoacyl-synthetase C-terminal extension RN05_RS15595 PF00550 Phosphopantetheine attachment site RN05_RS15595 PF00107 Zinc-binding dehydrogenase RN05_RS15595 PF00698 Acyl transferase domain RN05_RS15595 PF14765 Polyketide synthase dehydratase RN05_RS15595 PF08240 Alcohol dehydrogenase GroES-like domain RN05_RS15595 PF08659 KR domain RN05_RS15595 PF02801 Beta-ketoacyl synthase, C-terminal domain RN05_RS15595 PF00109 Beta-ketoacyl synthase, N-terminal domain RN05_RS15600 PF00501 AMP-binding enzyme RN05_RS15605 PF03176 MMPL family RN05_RS15615 PF01695 IstB-like ATP binding protein RN05_RS15620 PF07161 LppX_LprAFG lipoprotein RN05_RS15625 PF00109 Beta-ketoacyl synthase, N-terminal domain RN05_RS15625 PF14765 Polyketide synthase dehydratase RN05_RS15625 PF00550 Phosphopantetheine attachment site RN05_RS15625 PF00698 Acyl transferase domain RN05_RS15625 PF08240 Alcohol dehydrogenase GroES-like domain RN05_RS15625 PF08659 KR domain RN05_RS15625 PF02801 Beta-ketoacyl synthase, C-terminal domain RN05_RS15625 PF16197 Ketoacyl-synthetase C-terminal extension RN05_RS15630 PF02801 Beta-ketoacyl synthase, C-terminal domain RN05_RS15630 PF00109 Beta-ketoacyl synthase, N-terminal domain RN05_RS15630 PF16197 Ketoacyl-synthetase C-terminal extension RN05_RS15635 PF00501 AMP-binding enzyme RN05_RS15635 PF13193 AMP-binding enzyme C-terminal domain RN05_RS15635 PF00550 Phosphopantetheine attachment site RN05_RS15640 PF01947 p-hydroxybenzoic acid synthase RN05_RS15645 PF00501 AMP-binding enzyme RN05_RS15650 PF00296 Luciferase-like monooxygenase RN05_RS15655 PF08241 Methyltransferase domain RN05_RS15660 PF03435 Saccharopine dehydrogenase NADP binding domain RN05_RS15680 PF00535 Glycosyl transferase family 2 RN05_RS15690 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase RN05_RS15695 PF04989 Cephalosporin hydroxylase RN05_RS15710 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase RN05_RS15715 PF03773 Predicted permease RN05_RS15720 PF00551 Formyl transferase RN05_RS15720 PF01842 ACT domain RN05_RS15730 PF01467 Cytidylyltransferase-like RN05_RS15740 PF00289 Biotin carboxylase, N-terminal domain RN05_RS15740 PF00364 Biotin-requiring enzyme RN05_RS15740 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RN05_RS15740 PF00682 HMGL-like RN05_RS15740 PF02436 Conserved carboxylase domain RN05_RS15740 PF02785 Biotin carboxylase C-terminal domain RN05_RS15755 PF07859 alpha/beta hydrolase fold RN05_RS15760 PF00248 Aldo/keto reductase family RN05_RS15765 PF00248 Aldo/keto reductase family RN05_RS15775 PF17191 RecG wedge domain RN05_RS15775 PF00271 Helicase conserved C-terminal domain RN05_RS15775 PF00270 DEAD/DEAH box helicase RN05_RS15780 PF02734 DAK2 domain RN05_RS15780 PF13684 Dihydroxyacetone kinase family RN05_RS15790 PF00830 Ribosomal L28 family RN05_RS15795 PF03167 Uracil DNA glycosylase superfamily RN05_RS15800 PF00586 AIR synthase related protein, N-terminal domain RN05_RS15800 PF02769 AIR synthase related protein, C-terminal domain RN05_RS15805 PF12323 Helix-turn-helix domain RN05_RS15805 PF01385 Probable transposase RN05_RS15805 PF07282 Putative transposase DNA-binding domain RN05_RS15810 PF00239 Resolvase, N terminal domain RN05_RS15820 PF07478 D-ala D-ala ligase C-terminus RN05_RS15820 PF01820 D-ala D-ala ligase N-terminus RN05_RS15825 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus RN05_RS15825 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus RN05_RS15830 PF01983 Guanylyl transferase CofC like RN05_RS15835 PF13090 Polyphosphate kinase C-terminal domain 2 RN05_RS15835 PF17941 Polyphosphate kinase C-terminal domain 1 RN05_RS15835 PF13089 Polyphosphate kinase N-terminal domain RN05_RS15835 PF02503 Polyphosphate kinase middle domain RN05_RS15840 PF00293 NUDIX domain RN05_RS15840 PF00300 Histidine phosphatase superfamily (branch 1) RN05_RS15845 PF00216 Bacterial DNA-binding protein RN05_RS15850 PF00694 Aconitase C-terminal domain RN05_RS15855 PF00330 Aconitase family (aconitate hydratase) RN05_RS15885 PF00749 tRNA synthetases class I (E and Q), catalytic domain RN05_RS15890 PF01557 Fumarylacetoacetate (FAA) hydrolase family RN05_RS15895 PF07690 Major Facilitator Superfamily RN05_RS15900 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RN05_RS15900 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RN05_RS15900 PF01842 ACT domain RN05_RS15920 PF00672 HAMP domain RN05_RS15930 PF03649 Uncharacterised protein family (UPF0014) RN05_RS15935 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain RN05_RS15935 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain RN05_RS15940 PF01842 ACT domain RN05_RS15940 PF10369 Small subunit of acetolactate synthase RN05_RS15945 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RN05_RS15945 PF00205 Thiamine pyrophosphate enzyme, central domain RN05_RS15945 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RN05_RS15950 PF10756 Bacterial PH domain RN05_RS15955 PF07681 DoxX RN05_RS15975 PF02934 GatB/GatE catalytic domain RN05_RS15975 PF02637 GatB domain RN05_RS15980 PF00365 Phosphofructokinase RN05_RS15985 PF01425 Amidase RN05_RS15990 PF02686 Glu-tRNAGln amidotransferase C subunit RN05_RS16000 PF00533 BRCA1 C Terminus (BRCT) domain RN05_RS16000 PF01653 NAD-dependent DNA ligase adenylation domain RN05_RS16000 PF12826 Helix-hairpin-helix motif RN05_RS16000 PF03120 NAD-dependent DNA ligase OB-fold domain RN05_RS16000 PF03119 NAD-dependent DNA ligase C4 zinc finger domain RN05_RS16020 PF00823 PPE family RN05_RS16025 PF06013 Proteins of 100 residues with WXG RN05_RS16030 PF06013 Proteins of 100 residues with WXG RN05_RS16035 PF00823 PPE family RN05_RS16040 PF00934 PE family RN05_RS16045 PF00872 Transposase, Mutator family RN05_RS16055 PF00266 Aminotransferase class-V RN05_RS16070 PF01012 Electron transfer flavoprotein domain RN05_RS16070 PF00766 Electron transfer flavoprotein FAD-binding domain RN05_RS16075 PF01012 Electron transfer flavoprotein domain RN05_RS16080 PF08241 Methyltransferase domain RN05_RS16085 PF09210 Domain of unknown function (DUF1957) RN05_RS16085 PF03065 Glycosyl hydrolase family 57 RN05_RS16090 PF00534 Glycosyl transferases group 1 RN05_RS16090 PF13439 Glycosyltransferase Family 4 RN05_RS16105 PF00132 Bacterial transferase hexapeptide (six repeats) RN05_RS16110 PF13360 PQQ-like domain RN05_RS16115 PF11738 Protein of unknown function (DUF3298) RN05_RS16120 PF18096 THUMP domain-like RN05_RS16125 PF08241 Methyltransferase domain RN05_RS16130 PF00378 Enoyl-CoA hydratase/isomerase RN05_RS16140 PF00005 ABC transporter RN05_RS16150 PF00115 Cytochrome C and Quinol oxidase polypeptide I RN05_RS16165 PF08240 Alcohol dehydrogenase GroES-like domain RN05_RS16165 PF00107 Zinc-binding dehydrogenase RN05_RS16180 PF00268 Ribonucleotide reductase, small chain RN05_RS16185 PF00743 Flavin-binding monooxygenase-like RN05_RS16190 PF00440 Bacterial regulatory proteins, tetR family RN05_RS16195 PF08343 Ribonucleotide reductase N-terminal RN05_RS16195 PF00317 Ribonucleotide reductase, all-alpha domain RN05_RS16195 PF02867 Ribonucleotide reductase, barrel domain RN05_RS16200 PF07972 NrdI Flavodoxin like RN05_RS16210 PF03358 NADPH-dependent FMN reductase RN05_RS16220 PF11799 impB/mucB/samB family C-terminal domain RN05_RS16220 PF00817 impB/mucB/samB family RN05_RS16225 PF00106 short chain dehydrogenase RN05_RS16235 PF00067 Cytochrome P450 RN05_RS16240 PF07729 FCD domain RN05_RS16240 PF00392 Bacterial regulatory proteins, gntR family RN05_RS16245 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RN05_RS16245 PF02770 Acyl-CoA dehydrogenase, middle domain RN05_RS16245 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RN05_RS16250 PF04675 DNA ligase N terminus RN05_RS16250 PF04679 ATP dependent DNA ligase C terminal region RN05_RS16250 PF01068 ATP dependent DNA ligase domain RN05_RS16255 PF13722 5TM C-terminal transporter carbon starvation CstA RN05_RS16255 PF02554 Carbon starvation protein CstA RN05_RS16265 PF00893 Small Multidrug Resistance protein RN05_RS16275 PF05305 Protein of unknown function (DUF732) RN05_RS16285 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RN05_RS16285 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RN05_RS16285 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RN05_RS16285 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RN05_RS16290 PF02537 CrcB-like protein, Camphor Resistance (CrcB) RN05_RS16295 PF02537 CrcB-like protein, Camphor Resistance (CrcB) RN05_RS16310 PF04343 Protein of unknown function, DUF488 RN05_RS16340 PF00296 Luciferase-like monooxygenase RN05_RS16345 PF13191 AAA ATPase domain RN05_RS16345 PF00069 Protein kinase domain RN05_RS16355 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term RN05_RS16355 PF12833 Helix-turn-helix domain RN05_RS16360 PF00743 Flavin-binding monooxygenase-like RN05_RS16365 PF07859 alpha/beta hydrolase fold RN05_RS16370 PF00106 short chain dehydrogenase RN05_RS16375 PF08240 Alcohol dehydrogenase GroES-like domain RN05_RS16375 PF00107 Zinc-binding dehydrogenase RN05_RS16380 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain RN05_RS16380 PF06974 Protein of unknown function (DUF1298) RN05_RS16385 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain RN05_RS16385 PF06974 Protein of unknown function (DUF1298) RN05_RS16390 PF00501 AMP-binding enzyme RN05_RS16390 PF13193 AMP-binding enzyme C-terminal domain RN05_RS16405 PF05661 Protein of unknown function (DUF808) RN05_RS16415 PF08028 Acyl-CoA dehydrogenase, C-terminal domain RN05_RS16420 PF01638 HxlR-like helix-turn-helix RN05_RS16430 PF07859 alpha/beta hydrolase fold RN05_RS16430 PF00934 PE family RN05_RS16440 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system RN05_RS16455 PF01668 SmpB protein RN05_RS16460 PF18075 FtsX extracellular domain RN05_RS16460 PF02687 FtsX-like permease family RN05_RS16465 PF00005 ABC transporter RN05_RS16475 PF00924 Mechanosensitive ion channel RN05_RS16480 PF00472 RF-1 domain RN05_RS16480 PF03462 PCRF domain RN05_RS16485 PF07992 Pyridine nucleotide-disulphide oxidoreductase RN05_RS16490 PF01565 FAD binding domain RN05_RS16490 PF02913 FAD linked oxidases, C-terminal domain RN05_RS16505 PF06463 Molybdenum Cofactor Synthesis C RN05_RS16505 PF04055 Radical SAM superfamily RN05_RS16510 PF01329 Pterin 4 alpha carbinolamine dehydratase RN05_RS16515 PF01967 MoaC family RN05_RS16520 PF02597 ThiS family RN05_RS16535 PF00872 Transposase, Mutator family RN05_RS16540 PF00581 Rhodanese-like domain RN05_RS16540 PF00899 ThiF family RN05_RS16545 PF00581 Rhodanese-like domain RN05_RS16550 PF07210 Protein of unknown function (DUF1416) RN05_RS16555 PF02391 MoaE protein RN05_RS16565 PF00067 Cytochrome P450 RN05_RS16580 PF00486 Transcriptional regulatory protein, C terminal RN05_RS16580 PF03704 Bacterial transcriptional activator domain RN05_RS16585 PF12484 Polymorphic PE/PPE proteins C terminal RN05_RS16585 PF00823 PPE family RN05_RS16610 PF12900 Pyridoxamine 5'-phosphate oxidase RN05_RS16615 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain RN05_RS16615 PF06974 Protein of unknown function (DUF1298) RN05_RS16625 PF13185 GAF domain RN05_RS16625 PF07730 Histidine kinase RN05_RS16625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RN05_RS16630 PF00196 Bacterial regulatory proteins, luxR family RN05_RS16630 PF00072 Response regulator receiver domain RN05_RS16635 PF00582 Universal stress protein family RN05_RS16640 PF00823 PPE family RN05_RS16645 PF12484 Polymorphic PE/PPE proteins C terminal RN05_RS16645 PF00823 PPE family RN05_RS16655 PF00459 Inositol monophosphatase family RN05_RS16670 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RN05_RS16670 PF02770 Acyl-CoA dehydrogenase, middle domain RN05_RS16670 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RN05_RS16675 PF14765 Polyketide synthase dehydratase RN05_RS16675 PF00550 Phosphopantetheine attachment site RN05_RS16675 PF08659 KR domain RN05_RS16675 PF08240 Alcohol dehydrogenase GroES-like domain RN05_RS16675 PF00698 Acyl transferase domain RN05_RS16690 PF00823 PPE family RN05_RS16690 PF01469 Pentapeptide repeats (8 copies) RN05_RS16695 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 RN05_RS16700 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit RN05_RS16705 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit RN05_RS16710 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit RN05_RS16720 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit RN05_RS16720 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region RN05_RS16720 PF10531 SLBB domain RN05_RS16725 PF00384 Molybdopterin oxidoreductase RN05_RS16725 PF01568 Molydopterin dinucleotide binding domain RN05_RS16725 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RN05_RS16730 PF00146 NADH dehydrogenase RN05_RS16735 PF12838 4Fe-4S dicluster domain RN05_RS16740 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 RN05_RS16745 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L RN05_RS16750 PF00361 Proton-conducting membrane transporter RN05_RS16750 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus RN05_RS16755 PF00361 Proton-conducting membrane transporter RN05_RS16760 PF00361 Proton-conducting membrane transporter RN05_RS16765 PF01469 Pentapeptide repeats (8 copies) RN05_RS16765 PF00823 PPE family RN05_RS16775 PF00355 Rieske [2Fe-2S] domain RN05_RS16775 PF00848 Ring hydroxylating alpha subunit (catalytic domain) RN05_RS16785 PF01882 Protein of unknown function DUF58 RN05_RS16790 PF17863 AAA lid domain RN05_RS16790 PF07726 ATPase family associated with various cellular activities (AAA) RN05_RS16810 PF01636 Phosphotransferase enzyme family RN05_RS16820 PF01593 Flavin containing amine oxidoreductase RN05_RS16835 PF16859 Tetracyclin repressor-like, C-terminal domain RN05_RS16835 PF00440 Bacterial regulatory proteins, tetR family RN05_RS16845 PF01425 Amidase RN05_RS16855 PF12697 Alpha/beta hydrolase family RN05_RS16860 PF04075 F420H(2)-dependent quinone reductase RN05_RS16870 PF13635 Domain of unknown function (DUF4143) RN05_RS16870 PF13173 AAA domain RN05_RS16875 PF01850 PIN domain RN05_RS16880 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system RN05_RS16885 PF05973 Phage derived protein Gp49-like (DUF891) RN05_RS16890 PF13744 Helix-turn-helix domain RN05_RS16895 PF01527 Transposase RN05_RS16900 PF00665 Integrase core domain RN05_RS16900 PF13276 HTH-like domain RN05_RS16905 PF09722 Protein of unknown function (DUF2384) RN05_RS16910 PF08808 RES domain RN05_RS16930 PF13936 Helix-turn-helix domain RN05_RS16930 PF00665 Integrase core domain RN05_RS16950 PF03699 Uncharacterised protein family (UPF0182) RN05_RS16975 PF03109 ABC1 family RN05_RS16980 PF02178 AT hook motif RN05_RS16980 PF02467 Transcription factor WhiB RN05_RS16990 PF00462 Glutaredoxin RN05_RS16995 PF09297 NADH pyrophosphatase zinc ribbon domain RN05_RS16995 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain RN05_RS16995 PF00293 NUDIX domain RN05_RS17005 PF13361 UvrD-like helicase C-terminal domain RN05_RS17005 PF00580 UvrD/REP helicase N-terminal domain RN05_RS17020 PF12697 Alpha/beta hydrolase family RN05_RS17025 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RN05_RS17035 PF00899 ThiF family RN05_RS17035 PF00581 Rhodanese-like domain RN05_RS17065 PF00271 Helicase conserved C-terminal domain RN05_RS17065 PF00270 DEAD/DEAH box helicase RN05_RS17075 PF13614 AAA domain RN05_RS17080 PF00300 Histidine phosphatase superfamily (branch 1) RN05_RS17085 PF00425 chorismate binding enzyme RN05_RS17100 PF00781 Diacylglycerol kinase catalytic domain RN05_RS17105 PF02467 Transcription factor WhiB RN05_RS17110 PF12282 Signal transduction histidine kinase RN05_RS17110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RN05_RS17110 PF07568 Histidine kinase RN05_RS17115 PF00364 Biotin-requiring enzyme RN05_RS17120 PF13490 Putative zinc-finger RN05_RS17130 PF04542 Sigma-70 region 2 RN05_RS17130 PF08281 Sigma-70, region 4 RN05_RS17145 PF04073 Aminoacyl-tRNA editing domain RN05_RS17155 PF02586 SOS response associated peptidase (SRAP) RN05_RS17160 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RN05_RS17165 PF03193 RsgA GTPase RN05_RS17170 PF00487 Fatty acid desaturase RN05_RS17175 PF00175 Oxidoreductase NAD-binding domain RN05_RS17175 PF00970 Oxidoreductase FAD-binding domain RN05_RS17175 PF00111 2Fe-2S iron-sulfur cluster binding domain RN05_RS17185 PF03976 Polyphosphate kinase 2 (PPK2) RN05_RS17200 PF00999 Sodium/hydrogen exchanger family RN05_RS17200 PF02254 TrkA-N domain RN05_RS17210 PF07298 NnrU protein RN05_RS17215 PF01734 Patatin-like phospholipase RN05_RS17215 PF00027 Cyclic nucleotide-binding domain RN05_RS17220 PF01043 SecA preprotein cross-linking domain RN05_RS17220 PF07516 SecA Wing and Scaffold domain RN05_RS17220 PF07517 SecA DEAD-like domain RN05_RS17225 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein RN05_RS17225 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus RN05_RS17240 PF10647 Lipoprotein LpqB beta-propeller domain RN05_RS17240 PF10646 Sporulation and spore germination RN05_RS17245 PF00512 His Kinase A (phospho-acceptor) domain RN05_RS17245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RN05_RS17245 PF00672 HAMP domain RN05_RS17250 PF00486 Transcriptional regulatory protein, C terminal RN05_RS17250 PF00072 Response regulator receiver domain RN05_RS17255 PF02223 Thymidylate kinase RN05_RS17260 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain RN05_RS17260 PF05221 S-adenosyl-L-homocysteine hydrolase RN05_RS17270 PF00301 Rubredoxin RN05_RS17275 PF00301 Rubredoxin RN05_RS17280 PF00487 Fatty acid desaturase RN05_RS17285 PF13520 Amino acid permease RN05_RS17295 PF01238 Phosphomannose isomerase type I RN05_RS17305 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RN05_RS17305 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RN05_RS17305 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RN05_RS17305 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RN05_RS17320 PF02467 Transcription factor WhiB RN05_RS17325 PF01933 Uncharacterised protein family UPF0052 RN05_RS17330 PF01996 F420-0:Gamma-glutamyl ligase RN05_RS17330 PF00881 Nitroreductase family RN05_RS17335 PF02384 N-6 DNA Methylase RN05_RS17340 PF00483 Nucleotidyl transferase RN05_RS17350 PF04321 RmlD substrate binding domain RN05_RS17355 PF13399 LytR cell envelope-related transcriptional attenuator RN05_RS17355 PF03816 Cell envelope-related transcriptional attenuator domain RN05_RS17365 PF07371 Protein of unknown function (DUF1490) RN05_RS17380 PF02515 CoA-transferase family III RN05_RS17385 PF00916 Sulfate permease family RN05_RS17385 PF01740 STAS domain RN05_RS17390 PF02770 Acyl-CoA dehydrogenase, middle domain RN05_RS17390 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RN05_RS17390 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RN05_RS17395 PF00731 AIR carboxylase RN05_RS17400 PF02222 ATP-grasp domain RN05_RS17400 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain RN05_RS17415 PF02237 Biotin protein ligase C terminal domain RN05_RS17415 PF08279 HTH domain RN05_RS17415 PF03099 Biotin/lipoate A/B protein ligase family RN05_RS17420 PF01039 Carboxyl transferase domain RN05_RS17430 PF02545 Maf-like protein RN05_RS17435 PF00581 Rhodanese-like domain RN05_RS17440 PF02657 Fe-S metabolism associated domain RN05_RS17445 PF00364 Biotin-requiring enzyme RN05_RS17445 PF00289 Biotin carboxylase, N-terminal domain RN05_RS17445 PF02785 Biotin carboxylase C-terminal domain RN05_RS17445 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RN05_RS17450 PF04539 Sigma-70 region 3 RN05_RS17450 PF04542 Sigma-70 region 2 RN05_RS17450 PF04545 Sigma-70, region 4 RN05_RS17470 PF00202 Aminotransferase class-III RN05_RS17475 PF01037 Lrp/AsnC ligand binding domain RN05_RS17480 PF07063 Domain of unknown function (DUF1338) RN05_RS17485 PF00171 Aldehyde dehydrogenase family RN05_RS17495 PF00440 Bacterial regulatory proteins, tetR family RN05_RS17500 PF08494 DEAD/H associated RN05_RS17500 PF00271 Helicase conserved C-terminal domain RN05_RS17500 PF00270 DEAD/DEAH box helicase RN05_RS17505 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain RN05_RS17505 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain RN05_RS17515 PF00884 Sulfatase RN05_RS17515 PF16347 Domain of unknown function (DUF4976) RN05_RS17515 PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain RN05_RS17515 PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain RN05_RS17515 PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain RN05_RS17520 PF00849 RNA pseudouridylate synthase RN05_RS17525 PF01895 PhoU domain RN05_RS17530 PF16901 C-terminal domain of alpha-glycerophosphate oxidase RN05_RS17530 PF01266 FAD dependent oxidoreductase RN05_RS17535 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RN05_RS17535 PF07992 Pyridine nucleotide-disulphide oxidoreductase RN05_RS17545 PF04107 Glutamate-cysteine ligase family 2(GCS2) RN05_RS17545 PF01546 Peptidase family M20/M25/M40 RN05_RS17555 PF01048 Phosphorylase superfamily RN05_RS17560 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RN05_RS17560 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RN05_RS17560 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RN05_RS17560 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RN05_RS17570 PF04185 Phosphoesterase family RN05_RS17580 PF00561 alpha/beta hydrolase fold RN05_RS17590 PF00962 Adenosine/AMP deaminase RN05_RS17595 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain RN05_RS17595 PF00591 Glycosyl transferase family, a/b domain RN05_RS17595 PF02885 Glycosyl transferase family, helical bundle domain RN05_RS17600 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RN05_RS17605 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit RN05_RS17615 PF02910 Fumarate reductase flavoprotein C-term RN05_RS17615 PF00890 FAD binding domain RN05_RS17620 PF13085 2Fe-2S iron-sulfur cluster binding domain RN05_RS17625 PF01850 PIN domain RN05_RS17640 PF02391 MoaE protein RN05_RS17645 PF01967 MoaC family RN05_RS17655 PF01527 Transposase RN05_RS17660 PF13276 HTH-like domain RN05_RS17660 PF00665 Integrase core domain RN05_RS17665 PF01548 Transposase RN05_RS17665 PF02371 Transposase IS116/IS110/IS902 family RN05_RS17670 PF04542 Sigma-70 region 2 RN05_RS17670 PF12680 SnoaL-like domain RN05_RS17670 PF08281 Sigma-70, region 4 RN05_RS17675 PF00202 Aminotransferase class-III RN05_RS17680 PF00768 D-alanyl-D-alanine carboxypeptidase RN05_RS17685 PF00083 Sugar (and other) transporter RN05_RS17690 PF01979 Amidohydrolase family RN05_RS17700 PF13411 MerR HTH family regulatory protein RN05_RS17710 PF00579 tRNA synthetases class I (W and Y) RN05_RS17720 PF00180 Isocitrate/isopropylmalate dehydrogenase RN05_RS17725 PF01053 Cys/Met metabolism PLP-dependent enzyme RN05_RS17730 PF00561 alpha/beta hydrolase fold RN05_RS17735 PF08241 Methyltransferase domain RN05_RS17740 PF00823 PPE family RN05_RS17740 PF01469 Pentapeptide repeats (8 copies) RN05_RS17760 PF00823 PPE family RN05_RS17760 PF00823 PPE family RN05_RS17760 PF01469 Pentapeptide repeats (8 copies) RN05_RS17760 PF01469 Pentapeptide repeats (8 copies) RN05_RS17780 PF00823 PPE family RN05_RS17780 PF01469 Pentapeptide repeats (8 copies) RN05_RS17780 PF00823 PPE family RN05_RS17780 PF01469 Pentapeptide repeats (8 copies) RN05_RS17780 PF00823 PPE family RN05_RS17780 PF01469 Pentapeptide repeats (8 copies) RN05_RS17790 PF01565 FAD binding domain RN05_RS17790 PF08031 Berberine and berberine like RN05_RS17800 PF05305 Protein of unknown function (DUF732) RN05_RS17810 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain RN05_RS17810 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain RN05_RS17815 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system RN05_RS17820 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system RN05_RS17825 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RN05_RS17830 PF00005 ABC transporter RN05_RS17830 PF01061 ABC-2 type transporter RN05_RS17830 PF00498 FHA domain RN05_RS17835 PF13599 Pentapeptide repeats (9 copies) RN05_RS17850 PF03259 Roadblock/LC7 domain RN05_RS17860 PF00588 SpoU rRNA Methylase family RN05_RS17865 PF00934 PE family RN05_RS17880 PF07733 Bacterial DNA polymerase III alpha NTPase domain RN05_RS17880 PF17657 Bacterial DNA polymerase III alpha subunit finger domain RN05_RS17880 PF14579 Helix-hairpin-helix motif RN05_RS17880 PF02811 PHP domain RN05_RS17885 PF06974 Protein of unknown function (DUF1298) RN05_RS17885 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain RN05_RS17890 PF02358 Trehalose-phosphatase RN05_RS17895 PF00378 Enoyl-CoA hydratase/isomerase RN05_RS17905 PF01425 Amidase RN05_RS17915 PF00432 Prenyltransferase and squalene oxidase repeat RN05_RS17915 PF13243 Squalene-hopene cyclase C-terminal domain RN05_RS17925 PF13292 1-deoxy-D-xylulose-5-phosphate synthase RN05_RS17925 PF02780 Transketolase, C-terminal domain RN05_RS17925 PF02779 Transketolase, pyrimidine binding domain RN05_RS17935 PF13276 HTH-like domain RN05_RS17935 PF00665 Integrase core domain RN05_RS17940 PF01527 Transposase RN05_RS17945 PF02401 LytB protein RN05_RS17950 PF00348 Polyprenyl synthetase RN05_RS17955 PF01850 PIN domain RN05_RS17960 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system RN05_RS17975 PF00934 PE family RN05_RS17990 PF01575 MaoC like domain RN05_RS17995 PF00300 Histidine phosphatase superfamily (branch 1) RN05_RS17995 PF00934 PE family RN05_RS18000 PF00106 short chain dehydrogenase RN05_RS18010 PF01156 Inosine-uridine preferring nucleoside hydrolase RN05_RS18030 PF00117 Glutamine amidotransferase class-I RN05_RS18030 PF00958 GMP synthase C terminal domain RN05_RS18030 PF02540 NAD synthase RN05_RS18040 PF00348 Polyprenyl synthetase RN05_RS18045 PF04072 Leucine carboxyl methyltransferase RN05_RS18050 PF13419 Haloacid dehalogenase-like hydrolase RN05_RS18055 PF03636 Glycosyl hydrolase family 65, N-terminal domain RN05_RS18055 PF03633 Glycosyl hydrolase family 65, C-terminal domain RN05_RS18055 PF03632 Glycosyl hydrolase family 65 central catalytic domain RN05_RS18060 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RN05_RS18065 PF13454 FAD-NAD(P)-binding RN05_RS18070 PF18216 N-formyltransferase dimerization C-terminal domain RN05_RS18070 PF00551 Formyl transferase RN05_RS18075 PF00440 Bacterial regulatory proteins, tetR family RN05_RS18080 PF02668 Taurine catabolism dioxygenase TauD, TfdA family RN05_RS18085 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system RN05_RS18090 PF01850 PIN domain RN05_RS18095 PF05199 GMC oxidoreductase RN05_RS18100 PF00478 IMP dehydrogenase / GMP reductase domain RN05_RS18105 PF00571 CBS domain RN05_RS18105 PF00478 IMP dehydrogenase / GMP reductase domain RN05_RS18110 PF17252 Family of unknown function (DUF5319) RN05_RS18115 PF16751 Anti-sigma-D factor RsdA to sigma factor binding region RN05_RS18120 PF08281 Sigma-70, region 4 RN05_RS18120 PF04542 Sigma-70 region 2 RN05_RS18130 PF02467 Transcription factor WhiB RN05_RS18135 PF00118 TCP-1/cpn60 chaperonin family RN05_RS18140 PF00166 Chaperonin 10 Kd subunit RN05_RS18145 PF00814 Glycoprotease family RN05_RS18150 PF00583 Acetyltransferase (GNAT) family RN05_RS18155 PF00814 Glycoprotease family RN05_RS18160 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE RN05_RS18165 PF01168 Alanine racemase, N-terminal domain RN05_RS18165 PF00842 Alanine racemase, C-terminal domain RN05_RS18175 PF00823 PPE family RN05_RS18180 PF00823 PPE family RN05_RS18185 PF01695 IstB-like ATP binding protein RN05_RS18190 PF00665 Integrase core domain RN05_RS18200 PF00823 PPE family RN05_RS18205 PF13333 Integrase core domain RN05_RS18205 PF00665 Integrase core domain RN05_RS18205 PF13276 HTH-like domain RN05_RS18210 PF00872 Transposase, Mutator family RN05_RS18215 PF00282 Pyridoxal-dependent decarboxylase conserved domain RN05_RS18235 PF01380 SIS domain RN05_RS18260 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RN05_RS18260 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RN05_RS18260 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RN05_RS18260 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RN05_RS18265 PF00380 Ribosomal protein S9/S16 RN05_RS18270 PF00572 Ribosomal protein L13 RN05_RS18275 PF06013 Proteins of 100 residues with WXG RN05_RS18280 PF06013 Proteins of 100 residues with WXG RN05_RS18290 PF01580 FtsK/SpoIIIE family RN05_RS18295 PF08817 WXG100 protein secretion system (Wss), protein YukD RN05_RS18300 PF00082 Subtilase family RN05_RS18305 PF05108 Type VII secretion system ESX-1, transport TM domain B RN05_RS18310 PF01083 Cutinase RN05_RS18315 PF01083 Cutinase RN05_RS18330 PF01416 tRNA pseudouridine synthase RN05_RS18335 PF01196 Ribosomal protein L17 RN05_RS18340 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain RN05_RS18340 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain RN05_RS18340 PF01000 RNA polymerase Rpb3/RpoA insert domain RN05_RS18345 PF01479 S4 domain RN05_RS18345 PF00163 Ribosomal protein S4/S9 N-terminal domain RN05_RS18350 PF00411 Ribosomal protein S11 RN05_RS18355 PF00416 Ribosomal protein S13/S18 RN05_RS18360 PF00444 Ribosomal protein L36 RN05_RS18365 PF01176 Translation initiation factor 1A / IF-1 RN05_RS18375 PF16363 GDP-mannose 4,6 dehydratase RN05_RS18380 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase RN05_RS18385 PF02720 Domain of unknown function (DUF222) RN05_RS18385 PF01844 HNH endonuclease RN05_RS18390 PF16363 GDP-mannose 4,6 dehydratase RN05_RS18395 PF00682 HMGL-like RN05_RS18400 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RN05_RS18400 PF00205 Thiamine pyrophosphate enzyme, central domain RN05_RS18400 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RN05_RS18420 PF01527 Transposase RN05_RS18425 PF00665 Integrase core domain RN05_RS18425 PF13276 HTH-like domain RN05_RS18430 PF00083 Sugar (and other) transporter RN05_RS18435 PF00934 PE family RN05_RS18445 PF11856 Protein of unknown function (DUF3376) RN05_RS18445 PF01734 Patatin-like phospholipase RN05_RS18450 PF06974 Protein of unknown function (DUF1298) RN05_RS18450 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain RN05_RS18470 PF13399 LytR cell envelope-related transcriptional attenuator RN05_RS18470 PF03816 Cell envelope-related transcriptional attenuator domain RN05_RS18480 PF07681 DoxX RN05_RS18485 PF07859 alpha/beta hydrolase fold RN05_RS18490 PF03551 Transcriptional regulator PadR-like family RN05_RS18500 PF00982 Glycosyltransferase family 20 RN05_RS18525 PF02470 MlaD protein RN05_RS18550 PF02405 Permease MlaE RN05_RS18555 PF02405 Permease MlaE RN05_RS18570 PF02770 Acyl-CoA dehydrogenase, middle domain RN05_RS18570 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RN05_RS18570 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RN05_RS18575 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RN05_RS18575 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RN05_RS18580 PF13193 AMP-binding enzyme C-terminal domain RN05_RS18580 PF00501 AMP-binding enzyme RN05_RS18595 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RN05_RS18595 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RN05_RS18610 PF13193 AMP-binding enzyme C-terminal domain RN05_RS18610 PF00501 AMP-binding enzyme RN05_RS18630 PF00501 AMP-binding enzyme RN05_RS18630 PF13193 AMP-binding enzyme C-terminal domain RN05_RS18635 PF00378 Enoyl-CoA hydratase/isomerase RN05_RS18645 PF00067 Cytochrome P450 RN05_RS18655 PF00296 Luciferase-like monooxygenase RN05_RS18665 PF00108 Thiolase, N-terminal domain RN05_RS18665 PF02803 Thiolase, C-terminal domain RN05_RS18670 PF00814 Glycoprotease family RN05_RS18680 PF00132 Bacterial transferase hexapeptide (six repeats) RN05_RS18685 PF00355 Rieske [2Fe-2S] domain RN05_RS18720 PF12484 Polymorphic PE/PPE proteins C terminal RN05_RS18720 PF00823 PPE family RN05_RS18725 PF01469 Pentapeptide repeats (8 copies) RN05_RS18725 PF00823 PPE family RN05_RS18730 PF00682 HMGL-like RN05_RS18730 PF07836 DmpG-like communication domain RN05_RS18735 PF01118 Semialdehyde dehydrogenase, NAD binding domain RN05_RS18735 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation RN05_RS18740 PF01557 Fumarylacetoacetate (FAA) hydrolase family RN05_RS18745 PF00890 FAD binding domain RN05_RS18750 PF01575 MaoC like domain RN05_RS18755 PF08237 PE-PPE domain RN05_RS18755 PF00823 PPE family RN05_RS18770 PF13452 N-terminal half of MaoC dehydratase RN05_RS18775 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RN05_RS18775 PF02770 Acyl-CoA dehydrogenase, middle domain RN05_RS18775 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RN05_RS18780 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RN05_RS18780 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RN05_RS18785 PF00067 Cytochrome P450 RN05_RS18790 PF00108 Thiolase, N-terminal domain RN05_RS18790 PF02803 Thiolase, C-terminal domain RN05_RS18795 PF04075 F420H(2)-dependent quinone reductase RN05_RS18800 PF00106 short chain dehydrogenase RN05_RS18810 PF00378 Enoyl-CoA hydratase/isomerase RN05_RS18815 PF01144 Coenzyme A transferase RN05_RS18825 PF03060 Nitronate monooxygenase RN05_RS18830 PF00970 Oxidoreductase FAD-binding domain RN05_RS18830 PF00111 2Fe-2S iron-sulfur cluster binding domain RN05_RS18830 PF00175 Oxidoreductase NAD-binding domain RN05_RS18840 PF02803 Thiolase, C-terminal domain RN05_RS18840 PF00108 Thiolase, N-terminal domain RN05_RS18845 PF00440 Bacterial regulatory proteins, tetR family RN05_RS18845 PF17932 Tetracyclin repressor-like, C-terminal domain RN05_RS18850 PF00823 PPE family RN05_RS18850 PF01469 Pentapeptide repeats (8 copies) RN05_RS18860 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RN05_RS18860 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RN05_RS18860 PF02770 Acyl-CoA dehydrogenase, middle domain RN05_RS18865 PF00501 AMP-binding enzyme RN05_RS18865 PF13193 AMP-binding enzyme C-terminal domain RN05_RS18870 PF02770 Acyl-CoA dehydrogenase, middle domain RN05_RS18870 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RN05_RS18870 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RN05_RS18875 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RN05_RS18875 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RN05_RS18875 PF02770 Acyl-CoA dehydrogenase, middle domain RN05_RS18880 PF02770 Acyl-CoA dehydrogenase, middle domain RN05_RS18880 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RN05_RS18880 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RN05_RS18885 PF00155 Aminotransferase class I and II RN05_RS18890 PF00797 N-acetyltransferase RN05_RS18900 PF01613 Flavin reductase like domain RN05_RS18905 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RN05_RS18910 PF00561 alpha/beta hydrolase fold RN05_RS18915 PF08028 Acyl-CoA dehydrogenase, C-terminal domain RN05_RS18920 PF00111 2Fe-2S iron-sulfur cluster binding domain RN05_RS18920 PF00970 Oxidoreductase FAD-binding domain RN05_RS18920 PF00175 Oxidoreductase NAD-binding domain RN05_RS18930 PF02770 Acyl-CoA dehydrogenase, middle domain RN05_RS18930 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RN05_RS18930 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RN05_RS18935 PF17925 Tetracyclin repressor-like, C-terminal domain RN05_RS18935 PF00440 Bacterial regulatory proteins, tetR family RN05_RS18940 PF00356 Bacterial regulatory proteins, lacI family RN05_RS18960 PF08032 RNA 2'-O ribose methyltransferase substrate binding RN05_RS18960 PF00588 SpoU rRNA Methylase family RN05_RS18965 PF09190 DALR domain RN05_RS18965 PF01406 tRNA synthetases class I (C) catalytic domain RN05_RS18970 PF02542 YgbB family RN05_RS18975 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase RN05_RS18980 PF02559 CarD-like/TRCF domain RN05_RS18990 PF18073 Rubredoxin metal binding domain RN05_RS18995 PF02457 DisA bacterial checkpoint controller nucleotide-binding RN05_RS18995 PF10635 DisA bacterial checkpoint controller linker region RN05_RS19005 PF00484 Carbonic anhydrase RN05_RS19010 PF00633 Helix-hairpin-helix motif RN05_RS19010 PF00730 HhH-GPD superfamily base excision DNA repair protein RN05_RS19015 PF00934 PE family RN05_RS19025 PF03992 Antibiotic biosynthesis monooxygenase RN05_RS19040 PF00934 PE family RN05_RS19045 PF00004 ATPase family associated with various cellular activities (AAA) RN05_RS19045 PF07724 AAA domain (Cdc48 subfamily) RN05_RS19045 PF17871 AAA lid domain RN05_RS19045 PF02861 Clp amino terminal domain, pathogenicity island component RN05_RS19045 PF10431 C-terminal, D2-small domain, of ClpB protein RN05_RS19050 PF11774 Lsr2 RN05_RS19055 PF00152 tRNA synthetases class II (D, K and N) RN05_RS19055 PF01336 OB-fold nucleic acid binding domain RN05_RS19065 PF03309 Type III pantothenate kinase RN05_RS19070 PF02261 Aspartate decarboxylase RN05_RS19075 PF02569 Pantoate-beta-alanine ligase RN05_RS19095 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) RN05_RS19100 PF02152 Dihydroneopterin aldolase RN05_RS19105 PF00809 Pterin binding enzyme RN05_RS19110 PF01227 GTP cyclohydrolase I RN05_RS19115 PF17862 AAA+ lid domain RN05_RS19115 PF01434 Peptidase family M41 RN05_RS19115 PF00004 ATPase family associated with various cellular activities (AAA) RN05_RS19140 PF10824 Excreted virulence factor EspC, type VII ESX diderm RN05_RS19150 PF00561 alpha/beta hydrolase fold RN05_RS19155 PF00296 Luciferase-like monooxygenase RN05_RS19160 PF06013 Proteins of 100 residues with WXG RN05_RS19165 PF06013 Proteins of 100 residues with WXG RN05_RS19170 PF00823 PPE family RN05_RS19170 PF12484 Polymorphic PE/PPE proteins C terminal RN05_RS19175 PF00934 PE family RN05_RS19185 PF00156 Phosphoribosyl transferase domain RN05_RS19190 PF09179 TilS substrate binding domain RN05_RS19190 PF01171 PP-loop family RN05_RS19200 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family RN05_RS19205 PF00719 Inorganic pyrophosphatase RN05_RS19230 PF05721 Phytanoyl-CoA dioxygenase (PhyH) RN05_RS19235 PF16363 GDP-mannose 4,6 dehydratase RN05_RS19255 PF01695 IstB-like ATP binding protein RN05_RS19265 PF00872 Transposase, Mutator family RN05_RS19270 PF02661 Fic/DOC family RN05_RS19290 PF09115 DNA polymerase III, delta subunit, C terminal RN05_RS19295 PF00672 HAMP domain RN05_RS19295 PF00211 Adenylate and Guanylate cyclase catalytic domain RN05_RS19300 PF01131 DNA topoisomerase RN05_RS19300 PF01751 Toprim domain RN05_RS19300 PF13368 Topoisomerase C-terminal repeat RN05_RS19310 PF00313 'Cold-shock' DNA-binding domain RN05_RS19315 PF00270 DEAD/DEAH box helicase RN05_RS19315 PF00271 Helicase conserved C-terminal domain RN05_RS19315 PF09369 Domain of unknown function (DUF1998) RN05_RS19320 PF00934 PE family RN05_RS19330 PF00934 PE family RN05_RS19365 PF00437 Type II/IV secretion system protein RN05_RS19385 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RN05_RS19385 PF00005 ABC transporter RN05_RS19390 PF00528 Binding-protein-dependent transport system inner membrane component RN05_RS19390 PF12911 N-terminal TM domain of oligopeptide transport permease C RN05_RS19395 PF00528 Binding-protein-dependent transport system inner membrane component RN05_RS19405 PF13193 AMP-binding enzyme C-terminal domain RN05_RS19405 PF00501 AMP-binding enzyme RN05_RS19405 PF16177 Acetyl-coenzyme A synthetase N-terminus RN05_RS19425 PF02674 Colicin V production protein RN05_RS19430 PF00293 NUDIX domain RN05_RS19440 PF00633 Helix-hairpin-helix motif RN05_RS19440 PF00730 HhH-GPD superfamily base excision DNA repair protein RN05_RS19440 PF10576 Iron-sulfur binding domain of endonuclease III RN05_RS19450 PF13545 Crp-like helix-turn-helix domain RN05_RS19450 PF00027 Cyclic nucleotide-binding domain RN05_RS19455 PF16123 Hydroxyacylglutathione hydrolase C-terminus RN05_RS19455 PF00753 Metallo-beta-lactamase superfamily RN05_RS19470 PF02374 Anion-transporting ATPase RN05_RS19475 PF02374 Anion-transporting ATPase RN05_RS19480 PF02467 Transcription factor WhiB RN05_RS19485 PF00905 Penicillin binding protein transpeptidase domain RN05_RS19485 PF00912 Transglycosylase RN05_RS19490 PF00149 Calcineurin-like phosphoesterase RN05_RS19495 PF00291 Pyridoxal-phosphate dependent enzyme RN05_RS19505 PF00067 Cytochrome P450 RN05_RS19515 PF01740 STAS domain RN05_RS19535 PF14258 Domain of unknown function (DUF4350) RN05_RS19540 PF17863 AAA lid domain RN05_RS19540 PF07726 ATPase family associated with various cellular activities (AAA) RN05_RS19560 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RN05_RS19560 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RN05_RS19565 PF01850 PIN domain RN05_RS19580 PF13847 Methyltransferase domain RN05_RS19585 PF00266 Aminotransferase class-V RN05_RS19590 PF10017 Histidine-specific methyltransferase, SAM-dependent RN05_RS19600 PF03781 Sulfatase-modifying factor enzyme 1 RN05_RS19600 PF12867 DinB superfamily RN05_RS19605 PF04107 Glutamate-cysteine ligase family 2(GCS2) RN05_RS19625 PF13810 Domain of unknown function (DUF4185) RN05_RS19630 PF02774 Semialdehyde dehydrogenase, dimerisation domain RN05_RS19630 PF01118 Semialdehyde dehydrogenase, NAD binding domain RN05_RS19635 PF01842 ACT domain RN05_RS19635 PF00696 Amino acid kinase family RN05_RS19635 PF13840 ACT domain RN05_RS19640 PF00682 HMGL-like RN05_RS19640 PF08502 LeuA allosteric (dimerisation) domain RN05_RS19650 PF02875 Mur ligase family, glutamate ligase domain RN05_RS19650 PF08245 Mur ligase middle domain RN05_RS19665 PF02132 RecR protein RN05_RS19665 PF13662 Toprim domain RN05_RS19670 PF02575 YbaB/EbfC DNA-binding family RN05_RS19675 PF01520 N-acetylmuramoyl-L-alanine amidase RN05_RS19695 PF12169 DNA polymerase III subunits gamma and tau domain III RN05_RS19700 PF12897 Alanine-glyoxylate amino-transferase RN05_RS19720 PF01083 Cutinase RN05_RS19725 PF16363 GDP-mannose 4,6 dehydratase RN05_RS19730 PF08240 Alcohol dehydrogenase GroES-like domain RN05_RS19730 PF00107 Zinc-binding dehydrogenase RN05_RS19735 PF01593 Flavin containing amine oxidoreductase RN05_RS19740 PF07690 Major Facilitator Superfamily RN05_RS19745 PF13649 Methyltransferase domain RN05_RS19750 PF01068 ATP dependent DNA ligase domain RN05_RS19750 PF04679 ATP dependent DNA ligase C terminal region RN05_RS19750 PF13298 DNA polymerase Ligase (LigD) RN05_RS19755 PF04679 ATP dependent DNA ligase C terminal region RN05_RS19755 PF01068 ATP dependent DNA ligase domain RN05_RS19770 PF06974 Protein of unknown function (DUF1298) RN05_RS19770 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain RN05_RS19790 PF00823 PPE family RN05_RS19795 PF00823 PPE family RN05_RS19805 PF00743 Flavin-binding monooxygenase-like RN05_RS19810 PF00743 Flavin-binding monooxygenase-like RN05_RS19820 PF01022 Bacterial regulatory protein, arsR family RN05_RS19830 PF00934 PE family RN05_RS19850 PF12728 Helix-turn-helix domain RN05_RS19855 PF02899 Phage integrase, N-terminal SAM-like domain RN05_RS19855 PF00589 Phage integrase family RN05_RS19865 PF14437 MafB19-like deaminase RN05_RS19875 PF02153 Prephenate dehydrogenase RN05_RS19885 PF00528 Binding-protein-dependent transport system inner membrane component RN05_RS19890 PF00528 Binding-protein-dependent transport system inner membrane component RN05_RS19895 PF00005 ABC transporter RN05_RS19895 PF00571 CBS domain RN05_RS19905 PF06305 Lipopolysaccharide assembly protein A domain RN05_RS19915 PF14864 Alkyl sulfatase C-terminal RN05_RS19915 PF14863 Alkyl sulfatase dimerisation RN05_RS19915 PF00753 Metallo-beta-lactamase superfamily RN05_RS19920 PF05481 Mycobacterium 19 kDa lipoprotein antigen RN05_RS19925 PF00512 His Kinase A (phospho-acceptor) domain RN05_RS19925 PF00672 HAMP domain RN05_RS19925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RN05_RS19930 PF00486 Transcriptional regulatory protein, C terminal RN05_RS19930 PF00072 Response regulator receiver domain RN05_RS19940 PF04072 Leucine carboxyl methyltransferase RN05_RS19985 PF00155 Aminotransferase class I and II RN05_RS19995 PF00378 Enoyl-CoA hydratase/isomerase RN05_RS20000 PF00144 Beta-lactamase RN05_RS20005 PF02720 Domain of unknown function (DUF222) RN05_RS20015 PF00107 Zinc-binding dehydrogenase RN05_RS20015 PF08240 Alcohol dehydrogenase GroES-like domain RN05_RS20020 PF00266 Aminotransferase class-V RN05_RS20030 PF10759 Protein of unknown function (DUF2587) RN05_RS20035 PF00005 ABC transporter RN05_RS20045 PF01061 ABC-2 type transporter RN05_RS20050 PF16363 GDP-mannose 4,6 dehydratase RN05_RS20060 PF01551 Peptidase family M23 RN05_RS20065 PF04072 Leucine carboxyl methyltransferase RN05_RS20070 PF01272 Transcription elongation factor, GreA/GreB, C-term RN05_RS20075 PF04138 GtrA-like protein RN05_RS20085 PF00106 short chain dehydrogenase RN05_RS20090 PF12250 Arabinofuranosyltransferase N terminal RN05_RS20090 PF12249 Arabinofuranosyltransferase A C terminal RN05_RS20095 PF17689 Arabinosyltransferase concanavalin like domain RN05_RS20095 PF04602 Mycobacterial cell wall arabinan synthesis protein RN05_RS20095 PF14896 EmbC C-terminal domain RN05_RS20100 PF17689 Arabinosyltransferase concanavalin like domain RN05_RS20100 PF14896 EmbC C-terminal domain RN05_RS20100 PF04602 Mycobacterial cell wall arabinan synthesis protein RN05_RS20105 PF14896 EmbC C-terminal domain RN05_RS20105 PF17689 Arabinosyltransferase concanavalin like domain RN05_RS20105 PF04602 Mycobacterial cell wall arabinan synthesis protein RN05_RS20110 PF12706 Beta-lactamase superfamily domain RN05_RS20115 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RN05_RS20115 PF02770 Acyl-CoA dehydrogenase, middle domain RN05_RS20115 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RN05_RS20120 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 RN05_RS20120 PF13542 Helix-turn-helix domain of transposase family ISL3 RN05_RS20120 PF01610 Transposase RN05_RS20125 PF01039 Carboxyl transferase domain RN05_RS20130 PF00698 Acyl transferase domain RN05_RS20130 PF16197 Ketoacyl-synthetase C-terminal extension RN05_RS20130 PF00109 Beta-ketoacyl synthase, N-terminal domain RN05_RS20130 PF02801 Beta-ketoacyl synthase, C-terminal domain RN05_RS20130 PF00550 Phosphopantetheine attachment site RN05_RS20130 PF00975 Thioesterase domain RN05_RS20135 PF00501 AMP-binding enzyme RN05_RS20140 PF01083 Cutinase RN05_RS20145 PF00756 Putative esterase RN05_RS20150 PF00756 Putative esterase RN05_RS20160 PF01040 UbiA prenyltransferase family RN05_RS20165 PF01569 PAP2 superfamily RN05_RS20170 PF17994 Galactofuranosyltransferase 2 N-terminal RN05_RS20175 PF03275 UDP-galactopyranose mutase RN05_RS20180 PF01744 GLTT repeat (6 copies) RN05_RS20190 PF00934 PE family RN05_RS20215 PF01553 Acyltransferase RN05_RS20220 PF01636 Phosphotransferase enzyme family RN05_RS20225 PF00355 Rieske [2Fe-2S] domain RN05_RS20235 PF00668 Condensation domain RN05_RS20240 PF11139 Sap, sulfolipid-1-addressing protein RN05_RS20245 PF08237 PE-PPE domain RN05_RS20250 PF03176 MMPL family RN05_RS20255 PF00668 Condensation domain RN05_RS20260 PF14765 Polyketide synthase dehydratase RN05_RS20260 PF00550 Phosphopantetheine attachment site RN05_RS20260 PF08659 KR domain RN05_RS20260 PF02801 Beta-ketoacyl synthase, C-terminal domain RN05_RS20260 PF00109 Beta-ketoacyl synthase, N-terminal domain RN05_RS20260 PF16197 Ketoacyl-synthetase C-terminal extension RN05_RS20260 PF00107 Zinc-binding dehydrogenase RN05_RS20260 PF08240 Alcohol dehydrogenase GroES-like domain RN05_RS20260 PF00698 Acyl transferase domain RN05_RS20270 PF00501 AMP-binding enzyme RN05_RS20275 PF12323 Helix-turn-helix domain RN05_RS20275 PF07282 Putative transposase DNA-binding domain RN05_RS20275 PF01385 Probable transposase RN05_RS20280 PF00239 Resolvase, N terminal domain RN05_RS20285 PF01593 Flavin containing amine oxidoreductase RN05_RS20300 PF00398 Ribosomal RNA adenine dimethylase RN05_RS20305 PF12833 Helix-turn-helix domain RN05_RS20310 PF02403 Seryl-tRNA synthetase N-terminal domain RN05_RS20310 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RN05_RS20315 PF13845 Septum formation RN05_RS20330 PF01842 ACT domain RN05_RS20330 PF00800 Prephenate dehydratase RN05_RS20340 PF03816 Cell envelope-related transcriptional attenuator domain RN05_RS20345 PF00210 Ferritin-like domain RN05_RS20350 PF03009 Glycerophosphoryl diester phosphodiesterase family RN05_RS20375 PF02777 Iron/manganese superoxide dismutases, C-terminal domain RN05_RS20375 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain RN05_RS20385 PF01169 Uncharacterized protein family UPF0016 RN05_RS20410 PF03737 Aldolase/RraA RN05_RS20415 PF00743 Flavin-binding monooxygenase-like RN05_RS20420 PF00440 Bacterial regulatory proteins, tetR family RN05_RS20425 PF14791 DNA polymerase beta thumb RN05_RS20425 PF14716 Helix-hairpin-helix domain RN05_RS20425 PF02811 PHP domain RN05_RS20435 PF07992 Pyridine nucleotide-disulphide oxidoreductase RN05_RS20435 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster RN05_RS20440 PF01645 Conserved region in glutamate synthase RN05_RS20440 PF01493 GXGXG motif RN05_RS20440 PF00310 Glutamine amidotransferases class-II RN05_RS20440 PF04898 Glutamate synthase central domain RN05_RS20445 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RN05_RS20455 PF02467 Transcription factor WhiB RN05_RS20470 PF10824 Excreted virulence factor EspC, type VII ESX diderm RN05_RS20475 PF14011 EspG family RN05_RS20485 PF17866 AAA lid domain RN05_RS20485 PF00004 ATPase family associated with various cellular activities (AAA) RN05_RS20490 PF05108 Type VII secretion system ESX-1, transport TM domain B RN05_RS20495 PF01580 FtsK/SpoIIIE family RN05_RS20500 PF01580 FtsK/SpoIIIE family RN05_RS20505 PF00934 PE family RN05_RS20510 PF00823 PPE family RN05_RS20515 PF06013 Proteins of 100 residues with WXG RN05_RS20520 PF06013 Proteins of 100 residues with WXG RN05_RS20525 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RN05_RS20530 PF08817 WXG100 protein secretion system (Wss), protein YukD RN05_RS20545 PF02575 YbaB/EbfC DNA-binding family RN05_RS20550 PF18625 ESX-1 secreted protein B PE domain RN05_RS20555 PF11203 Putative type VII ESX secretion system translocon, EccE RN05_RS20560 PF00082 Subtilase family RN05_RS20565 PF00004 ATPase family associated with various cellular activities (AAA) RN05_RS20565 PF17866 AAA lid domain RN05_RS20570 PF11203 Putative type VII ESX secretion system translocon, EccE RN05_RS20575 PF00082 Subtilase family RN05_RS20580 PF08817 WXG100 protein secretion system (Wss), protein YukD RN05_RS20585 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RN05_RS20590 PF14011 EspG family RN05_RS20595 PF06013 Proteins of 100 residues with WXG RN05_RS20600 PF06013 Proteins of 100 residues with WXG RN05_RS20605 PF00823 PPE family RN05_RS20615 PF01580 FtsK/SpoIIIE family RN05_RS20620 PF05108 Type VII secretion system ESX-1, transport TM domain B RN05_RS20640 PF18645 Family of unknown function (DUF5631) RN05_RS20640 PF18646 Family of unknown function (DUF5632) RN05_RS20645 PF18645 Family of unknown function (DUF5631) RN05_RS20645 PF18646 Family of unknown function (DUF5632) RN05_RS20655 PF15598 Immunity protein 61 RN05_RS20660 PF14021 Tuberculosis necrotizing toxin RN05_RS20665 PF06013 Proteins of 100 residues with WXG RN05_RS20670 PF06013 Proteins of 100 residues with WXG RN05_RS20680 PF01743 Poly A polymerase head domain RN05_RS20680 PF12627 Probable RNA and SrmB- binding site of polymerase A RN05_RS20680 PF13735 tRNA nucleotidyltransferase domain 2 putative RN05_RS20685 PF00293 NUDIX domain RN05_RS20695 PF03023 Lipid II flippase MurJ RN05_RS20700 PF04542 Sigma-70 region 2 RN05_RS20700 PF08281 Sigma-70, region 4 RN05_RS20710 PF07992 Pyridine nucleotide-disulphide oxidoreductase RN05_RS20715 PF00085 Thioredoxin RN05_RS20720 PF01471 Putative peptidoglycan binding domain RN05_RS20720 PF01520 N-acetylmuramoyl-L-alanine amidase RN05_RS20730 PF17762 HTH domain found in ParB protein RN05_RS20730 PF02195 ParB-like nuclease domain RN05_RS20735 PF13614 AAA domain RN05_RS20740 PF02527 rRNA small subunit methyltransferase G RN05_RS20750 PF02096 60Kd inner membrane protein RN05_RS20755 PF01809 Putative membrane protein insertion efficiency factor RN05_RS20760 PF00825 Ribonuclease P RN05_RS20765 PF00468 Ribosomal protein L34