locus-tag class description CP439_RS00005 PF00308 Bacterial dnaA protein CP439_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix CP439_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain CP439_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain CP439_RS00010 PF02767 DNA polymerase III beta subunit, central domain CP439_RS00015 PF02463 RecF/RecN/SMC N terminal domain CP439_RS00020 PF05258 Dna[CI] antecedent, DciA CP439_RS00025 PF00204 DNA gyrase B CP439_RS00025 PF00986 DNA gyrase B subunit, carboxyl terminus CP439_RS00025 PF01751 Toprim domain CP439_RS00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CP439_RS00030 PF03989 DNA gyrase C-terminal domain, beta-propeller CP439_RS00030 PF00521 DNA gyrase/topoisomerase IV, subunit A CP439_RS00035 PF12089 Transmembrane domain of unknown function (DUF3566) CP439_RS00055 PF10814 Cell wall synthesis protein CwsA CP439_RS00060 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CP439_RS00065 PF10756 Bacterial PH domain CP439_RS00070 PF06781 Cell division protein CrgA CP439_RS00080 PF00117 Glutamine amidotransferase class-I CP439_RS00085 PF00069 Protein kinase domain CP439_RS00085 PF03793 PASTA domain CP439_RS00090 PF00069 Protein kinase domain CP439_RS00095 PF00905 Penicillin binding protein transpeptidase domain CP439_RS00100 PF01098 Cell cycle protein CP439_RS00110 PF16697 Inner membrane component of T3SS, cytoplasmic domain CP439_RS00115 PF00498 FHA domain CP439_RS00115 PF12401 Protein of unknown function (DUF2662) CP439_RS00130 PF02467 Transcription factor WhiB CP439_RS00135 PF01381 Helix-turn-helix CP439_RS00140 PF00877 NlpC/P60 family CP439_RS00145 PF10774 Domain of unknown function (DUF4226) CP439_RS00150 PF10774 Domain of unknown function (DUF4226) CP439_RS00155 PF10824 Excreted virulence factor EspC, type VII ESX diderm CP439_RS00160 PF10904 Protein of unknown function (DUF2694) CP439_RS00165 PF18645 Family of unknown function (DUF5631) CP439_RS00165 PF18646 Family of unknown function (DUF5632) CP439_RS00170 PF10921 Protein of unknown function (DUF2710) CP439_RS00185 PF00155 Aminotransferase class I and II CP439_RS00185 PF13480 Acetyltransferase (GNAT) domain CP439_RS00190 PF00550 Phosphopantetheine attachment site CP439_RS00195 PF12680 SnoaL-like domain CP439_RS00200 PF00501 AMP-binding enzyme CP439_RS00205 PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain CP439_RS00205 PF08608 Wyosine base formation CP439_RS00210 PF07690 Major Facilitator Superfamily CP439_RS00215 PF02622 Uncharacterized ACR, COG1678 CP439_RS00225 PF10738 Probable lipoprotein LpqN CP439_RS00230 PF09334 tRNA synthetases class I (M) CP439_RS00230 PF13603 Leucyl-tRNA synthetase, Domain 2 CP439_RS00230 PF08264 Anticodon-binding domain of tRNA CP439_RS00240 PF00392 Bacterial regulatory proteins, gntR family CP439_RS00245 PF00296 Luciferase-like monooxygenase CP439_RS00250 PF12697 Alpha/beta hydrolase family CP439_RS00255 PF01658 Myo-inositol-1-phosphate synthase CP439_RS00265 PF08044 Domain of unknown function (DUF1707) CP439_RS00270 PF17249 Family of unknown function (DUF5318) CP439_RS00275 PF00905 Penicillin binding protein transpeptidase domain CP439_RS00275 PF00912 Transglycosylase CP439_RS00285 PF01965 DJ-1/PfpI family CP439_RS00290 PF01250 Ribosomal protein S6 CP439_RS00295 PF00436 Single-strand binding protein family CP439_RS00300 PF01084 Ribosomal protein S18 CP439_RS00305 PF01281 Ribosomal protein L9, N-terminal domain CP439_RS00305 PF03948 Ribosomal protein L9, C-terminal domain CP439_RS00315 PF14528 LAGLIDADG-like domain CP439_RS00315 PF00772 DnaB-like helicase N terminal domain CP439_RS00315 PF03796 DnaB-like helicase C terminal domain CP439_RS00340 PF01341 Glycosyl hydrolases family 6 CP439_RS00340 PF00553 Cellulose binding domain CP439_RS00345 PF08031 Berberine and berberine like CP439_RS00345 PF01565 FAD binding domain CP439_RS00355 PF03699 Uncharacterised protein family (UPF0182) CP439_RS00365 PF01850 PIN domain CP439_RS00370 PF03971 Monomeric isocitrate dehydrogenase CP439_RS00375 PF00440 Bacterial regulatory proteins, tetR family CP439_RS00385 PF03313 Serine dehydratase alpha chain CP439_RS00385 PF03315 Serine dehydratase beta chain CP439_RS00390 PF00464 Serine hydroxymethyltransferase CP439_RS00395 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CP439_RS00405 PF00027 Cyclic nucleotide-binding domain CP439_RS00405 PF00005 ABC transporter CP439_RS00410 PF01979 Amidohydrolase family CP439_RS00415 PF00155 Aminotransferase class I and II CP439_RS00430 PF00440 Bacterial regulatory proteins, tetR family CP439_RS00445 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus CP439_RS00450 PF12900 Pyridoxamine 5'-phosphate oxidase CP439_RS00460 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CP439_RS00465 PF00361 Proton-conducting membrane transporter CP439_RS00470 PF00146 NADH dehydrogenase CP439_RS00480 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CP439_RS00480 PF00361 Proton-conducting membrane transporter CP439_RS00485 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CP439_RS00485 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CP439_RS00485 PF00374 Nickel-dependent hydrogenase CP439_RS00490 PF10604 Polyketide cyclase / dehydrase and lipid transport CP439_RS00495 PF08241 Methyltransferase domain CP439_RS00500 PF09900 Predicted membrane protein (DUF2127) CP439_RS00510 PF01048 Phosphorylase superfamily CP439_RS00515 PF00403 Heavy-metal-associated domain CP439_RS00520 PF13490 Putative zinc-finger CP439_RS00530 PF02720 Domain of unknown function (DUF222) CP439_RS00535 PF00823 PPE family CP439_RS00540 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CP439_RS00545 PF10862 FcoT-like thioesterase domain CP439_RS00550 PF13193 AMP-binding enzyme C-terminal domain CP439_RS00550 PF00501 AMP-binding enzyme CP439_RS00555 PF00550 Phosphopantetheine attachment site CP439_RS00560 PF00975 Thioesterase domain CP439_RS00560 PF00550 Phosphopantetheine attachment site CP439_RS00560 PF00668 Condensation domain CP439_RS00560 PF13193 AMP-binding enzyme C-terminal domain CP439_RS00560 PF00501 AMP-binding enzyme CP439_RS00565 PF05425 Copper resistance protein D CP439_RS00565 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) CP439_RS00570 PF00403 Heavy-metal-associated domain CP439_RS00575 PF00027 Cyclic nucleotide-binding domain CP439_RS00580 PF00830 Ribosomal L28 family CP439_RS00585 PF07683 Cobalamin synthesis protein cobW C-terminal domain CP439_RS00585 PF02492 CobW/HypB/UreG, nucleotide-binding domain CP439_RS00590 PF00689 Cation transporting ATPase, C-terminus CP439_RS00600 PF00934 PE family CP439_RS00610 PF01757 Acyltransferase family CP439_RS00615 PF16363 GDP-mannose 4,6 dehydratase CP439_RS00620 PF13580 SIS domain CP439_RS00630 PF00288 GHMP kinases N terminal domain CP439_RS00630 PF08544 GHMP kinases C terminal CP439_RS00640 PF17964 Bacterial Ig domain CP439_RS00640 PF03734 L,D-transpeptidase catalytic domain CP439_RS00645 PF03466 LysR substrate binding domain CP439_RS00645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CP439_RS00650 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CP439_RS00650 PF00205 Thiamine pyrophosphate enzyme, central domain CP439_RS00650 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CP439_RS00655 PF13193 AMP-binding enzyme C-terminal domain CP439_RS00655 PF00501 AMP-binding enzyme CP439_RS00660 PF03144 Elongation factor Tu domain 2 CP439_RS00660 PF03764 Elongation factor G, domain IV CP439_RS00660 PF00009 Elongation factor Tu GTP binding domain CP439_RS00660 PF00679 Elongation factor G C-terminus CP439_RS00660 PF14492 Elongation Factor G, domain II CP439_RS00680 PF00934 PE family CP439_RS00685 PF13180 PDZ domain CP439_RS00690 PF00128 Alpha amylase, catalytic domain CP439_RS00690 PF16657 Maltogenic Amylase, C-terminal domain CP439_RS00695 PF18085 Maltokinase N-terminal cap domain CP439_RS00705 PF00756 Putative esterase CP439_RS00710 PF01575 MaoC like domain CP439_RS00715 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CP439_RS00715 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CP439_RS00715 PF02770 Acyl-CoA dehydrogenase, middle domain CP439_RS00720 PF00296 Luciferase-like monooxygenase CP439_RS00725 PF00583 Acetyltransferase (GNAT) family CP439_RS00730 PF00561 alpha/beta hydrolase fold CP439_RS00740 PF00067 Cytochrome P450 CP439_RS00745 PF01625 Peptide methionine sulfoxide reductase CP439_RS00775 PF00654 Voltage gated chloride channel CP439_RS00780 PF00440 Bacterial regulatory proteins, tetR family CP439_RS00785 PF04072 Leucine carboxyl methyltransferase CP439_RS00790 PF04072 Leucine carboxyl methyltransferase CP439_RS00795 PF00171 Aldehyde dehydrogenase family CP439_RS00800 PF00106 short chain dehydrogenase CP439_RS00805 PF14765 Polyketide synthase dehydratase CP439_RS00805 PF08659 KR domain CP439_RS00805 PF02801 Beta-ketoacyl synthase, C-terminal domain CP439_RS00805 PF00109 Beta-ketoacyl synthase, N-terminal domain CP439_RS00805 PF00550 Phosphopantetheine attachment site CP439_RS00805 PF00107 Zinc-binding dehydrogenase CP439_RS00805 PF00698 Acyl transferase domain CP439_RS00805 PF16197 Ketoacyl-synthetase C-terminal extension CP439_RS00805 PF08240 Alcohol dehydrogenase GroES-like domain CP439_RS00810 PF00823 PPE family CP439_RS00810 PF08237 PE-PPE domain CP439_RS00820 PF08237 PE-PPE domain CP439_RS00820 PF00823 PPE family CP439_RS00825 PF08237 PE-PPE domain CP439_RS00825 PF00823 PPE family CP439_RS00830 PF00934 PE family CP439_RS00835 PF13350 Tyrosine phosphatase family CP439_RS00840 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CP439_RS00840 PF02770 Acyl-CoA dehydrogenase, middle domain CP439_RS00840 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CP439_RS00850 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CP439_RS00850 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CP439_RS00855 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CP439_RS00855 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CP439_RS00855 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CP439_RS00860 PF02233 NAD(P) transhydrogenase beta subunit CP439_RS00870 PF00440 Bacterial regulatory proteins, tetR family CP439_RS00870 PF08362 YcdC-like protein, C-terminal region CP439_RS00875 PF08237 PE-PPE domain CP439_RS00875 PF00934 PE family CP439_RS00880 PF00934 PE family CP439_RS00880 PF08237 PE-PPE domain CP439_RS00885 PF01565 FAD binding domain CP439_RS00885 PF02913 FAD linked oxidases, C-terminal domain CP439_RS00890 PF08240 Alcohol dehydrogenase GroES-like domain CP439_RS00890 PF00107 Zinc-binding dehydrogenase CP439_RS00915 PF13193 AMP-binding enzyme C-terminal domain CP439_RS00915 PF00501 AMP-binding enzyme CP439_RS00920 PF02405 Permease MlaE CP439_RS00925 PF02405 Permease MlaE CP439_RS00950 PF02470 MlaD protein CP439_RS00965 PF06271 RDD family CP439_RS00990 PF17954 Quercetinase C-terminal cupin domain CP439_RS00990 PF02678 Pirin CP439_RS00995 PF12680 SnoaL-like domain CP439_RS00995 PF04542 Sigma-70 region 2 CP439_RS00995 PF08281 Sigma-70, region 4 CP439_RS01000 PF12146 Serine aminopeptidase, S33 CP439_RS01015 PF01915 Glycosyl hydrolase family 3 C-terminal domain CP439_RS01015 PF14310 Fibronectin type III-like domain CP439_RS01015 PF00933 Glycosyl hydrolase family 3 N terminal domain CP439_RS01025 PF01596 O-methyltransferase CP439_RS01035 PF00920 Dehydratase family CP439_RS01040 PF02583 Metal-sensitive transcriptional repressor CP439_RS01045 PF07690 Major Facilitator Superfamily CP439_RS01050 PF17964 Bacterial Ig domain CP439_RS01050 PF03734 L,D-transpeptidase catalytic domain CP439_RS01060 PF00664 ABC transporter transmembrane region CP439_RS01060 PF00005 ABC transporter CP439_RS01070 PF00440 Bacterial regulatory proteins, tetR family CP439_RS01075 PF00384 Molybdopterin oxidoreductase CP439_RS01075 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CP439_RS01075 PF01568 Molydopterin dinucleotide binding domain CP439_RS01075 PF10518 TAT (twin-arginine translocation) pathway signal sequence CP439_RS01080 PF05649 Peptidase family M13 CP439_RS01080 PF01431 Peptidase family M13 CP439_RS01100 PF03176 MMPL family CP439_RS01105 PF16525 Haemophore, haem-binding CP439_RS01115 PF01594 AI-2E family transporter CP439_RS01120 PF03176 MMPL family CP439_RS01130 PF02390 Putative methyltransferase CP439_RS01145 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain CP439_RS01145 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain CP439_RS01160 PF13193 AMP-binding enzyme C-terminal domain CP439_RS01160 PF00501 AMP-binding enzyme CP439_RS01175 PF07859 alpha/beta hydrolase fold CP439_RS01180 PF00174 Oxidoreductase molybdopterin binding domain CP439_RS01190 PF07859 alpha/beta hydrolase fold CP439_RS01195 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain CP439_RS01195 PF06974 Protein of unknown function (DUF1298) CP439_RS01200 PF00378 Enoyl-CoA hydratase/isomerase CP439_RS01205 PF00171 Aldehyde dehydrogenase family CP439_RS01210 PF08241 Methyltransferase domain CP439_RS01215 PF08323 Starch synthase catalytic domain CP439_RS01215 PF00534 Glycosyl transferases group 1 CP439_RS01235 PF01850 PIN domain CP439_RS01245 PF02126 Phosphotriesterase family CP439_RS01255 PF00440 Bacterial regulatory proteins, tetR family CP439_RS01255 PF17754 MftR C-terminal domain CP439_RS01260 PF00268 Ribonucleotide reductase, small chain CP439_RS01265 PF00171 Aldehyde dehydrogenase family CP439_RS01275 PF11847 Alpha-(1->3)-arabinofuranosyltransferase CP439_RS01280 PF11021 Protein of unknown function (DUF2613) CP439_RS01285 PF00933 Glycosyl hydrolase family 3 N terminal domain CP439_RS01300 PF01850 PIN domain CP439_RS01305 PF01575 MaoC like domain CP439_RS01315 PF02803 Thiolase, C-terminal domain CP439_RS01315 PF00108 Thiolase, N-terminal domain CP439_RS01320 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CP439_RS01320 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CP439_RS01320 PF02770 Acyl-CoA dehydrogenase, middle domain CP439_RS01320 PF12806 Acetyl-CoA dehydrogenase C-terminal like CP439_RS01325 PF01613 Flavin reductase like domain CP439_RS01335 PF13085 2Fe-2S iron-sulfur cluster binding domain CP439_RS01335 PF13183 4Fe-4S dicluster domain CP439_RS01340 PF00890 FAD binding domain CP439_RS01340 PF02910 Fumarate reductase flavoprotein C-term CP439_RS01360 PF07992 Pyridine nucleotide-disulphide oxidoreductase CP439_RS01360 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CP439_RS01360 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CP439_RS01360 PF18267 Rubredoxin NAD+ reductase C-terminal domain CP439_RS01360 PF13806 Rieske-like [2Fe-2S] domain CP439_RS01360 PF04324 BFD-like [2Fe-2S] binding domain CP439_RS01370 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CP439_RS01375 PF07685 CobB/CobQ-like glutamine amidotransferase domain CP439_RS01375 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CP439_RS01380 PF00823 PPE family CP439_RS01410 PF07690 Major Facilitator Superfamily CP439_RS01420 PF02626 Carboxyltransferase domain, subdomain A and B CP439_RS01435 PF01968 Hydantoinase/oxoprolinase CP439_RS01435 PF05378 Hydantoinase/oxoprolinase N-terminal region CP439_RS01440 PF07690 Major Facilitator Superfamily CP439_RS01445 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system CP439_RS01455 PF00501 AMP-binding enzyme CP439_RS01455 PF13193 AMP-binding enzyme C-terminal domain CP439_RS01460 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CP439_RS01460 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CP439_RS01460 PF02770 Acyl-CoA dehydrogenase, middle domain CP439_RS01475 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CP439_RS01485 PF09995 Uncharacterized protein conserved in bacteria (DUF2236) CP439_RS01490 PF01850 PIN domain CP439_RS01495 PF01402 Ribbon-helix-helix protein, copG family CP439_RS01505 PF00934 PE family CP439_RS01505 PF00934 PE family CP439_RS01510 PF00823 PPE family CP439_RS01515 PF04072 Leucine carboxyl methyltransferase CP439_RS01520 PF00004 ATPase family associated with various cellular activities (AAA) CP439_RS01520 PF17866 AAA lid domain CP439_RS01525 PF05108 Type VII secretion system ESX-1, transport TM domain B CP439_RS01530 PF01580 FtsK/SpoIIIE family CP439_RS01535 PF00934 PE family CP439_RS01540 PF00823 PPE family CP439_RS01545 PF06013 Proteins of 100 residues with WXG CP439_RS01550 PF06013 Proteins of 100 residues with WXG CP439_RS01555 PF14011 EspG family CP439_RS01560 PF08817 WXG100 protein secretion system (Wss), protein YukD CP439_RS01565 PF00082 Subtilase family CP439_RS01570 PF11203 Putative type VII ESX secretion system translocon, EccE CP439_RS01585 PF09037 Stf0 sulphotransferase CP439_RS01590 PF00884 Sulfatase CP439_RS01595 PF00934 PE family CP439_RS01600 PF01402 Ribbon-helix-helix protein, copG family CP439_RS01610 PF01402 Ribbon-helix-helix protein, copG family CP439_RS01615 PF01850 PIN domain CP439_RS01625 PF00106 short chain dehydrogenase CP439_RS01630 PF00823 PPE family CP439_RS01630 PF08237 PE-PPE domain CP439_RS01635 PF00881 Nitroreductase family CP439_RS01645 PF01569 PAP2 superfamily CP439_RS01655 PF13577 SnoaL-like domain CP439_RS01685 PF02426 Muconolactone delta-isomerase CP439_RS01690 PF03009 Glycerophosphoryl diester phosphodiesterase family CP439_RS01705 PF01470 Pyroglutamyl peptidase CP439_RS01715 PF00692 dUTPase CP439_RS01720 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CP439_RS01720 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CP439_RS01720 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CP439_RS01725 PF02585 GlcNAc-PI de-N-acetylase CP439_RS01730 PF01022 Bacterial regulatory protein, arsR family CP439_RS01740 PF08241 Methyltransferase domain CP439_RS01745 PF00067 Cytochrome P450 CP439_RS01755 PF01209 ubiE/COQ5 methyltransferase family CP439_RS01765 PF07992 Pyridine nucleotide-disulphide oxidoreductase CP439_RS01780 PF00483 Nucleotidyl transferase CP439_RS01785 PF00934 PE family CP439_RS01790 PF02720 Domain of unknown function (DUF222) CP439_RS01800 PF00155 Aminotransferase class I and II CP439_RS01805 PF02665 Nitrate reductase gamma subunit CP439_RS01805 PF13183 4Fe-4S dicluster domain CP439_RS01805 PF02754 Cysteine-rich domain CP439_RS01825 PF00350 Dynamin family CP439_RS01830 PF00350 Dynamin family CP439_RS01845 PF00324 Amino acid permease CP439_RS01865 PF00012 Hsp70 protein CP439_RS01870 PF01025 GrpE CP439_RS01875 PF00684 DnaJ central domain CP439_RS01875 PF01556 DnaJ C terminal domain CP439_RS01875 PF00226 DnaJ domain CP439_RS01880 PF13411 MerR HTH family regulatory protein CP439_RS01910 PF00709 Adenylosuccinate synthetase CP439_RS01935 PF00571 CBS domain CP439_RS01935 PF03448 MgtE intracellular N domain CP439_RS01935 PF01769 Divalent cation transporter CP439_RS01940 PF01116 Fructose-bisphosphate aldolase class-II CP439_RS01945 PF09335 SNARE associated Golgi protein CP439_RS01980 PF12804 MobA-like NTP transferase domain CP439_RS01990 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CP439_RS01990 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CP439_RS01995 PF01799 [2Fe-2S] binding domain CP439_RS01995 PF00111 2Fe-2S iron-sulfur cluster binding domain CP439_RS02000 PF03450 CO dehydrogenase flavoprotein C-terminal domain CP439_RS02000 PF00941 FAD binding domain in molybdopterin dehydrogenase CP439_RS02010 PF03466 LysR substrate binding domain CP439_RS02010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CP439_RS02020 PF07311 Dodecin CP439_RS02035 PF00156 Phosphoribosyl transferase domain CP439_RS02045 PF07724 AAA domain (Cdc48 subfamily) CP439_RS02045 PF17871 AAA lid domain CP439_RS02045 PF02861 Clp amino terminal domain, pathogenicity island component CP439_RS02045 PF00004 ATPase family associated with various cellular activities (AAA) CP439_RS02045 PF10431 C-terminal, D2-small domain, of ClpB protein CP439_RS02050 PF00970 Oxidoreductase FAD-binding domain CP439_RS02050 PF00175 Oxidoreductase NAD-binding domain CP439_RS02050 PF00111 2Fe-2S iron-sulfur cluster binding domain CP439_RS02055 PF00196 Bacterial regulatory proteins, luxR family CP439_RS02060 PF00823 PPE family CP439_RS02060 PF12484 Polymorphic PE/PPE proteins C terminal CP439_RS02080 PF01053 Cys/Met metabolism PLP-dependent enzyme CP439_RS02085 PF07992 Pyridine nucleotide-disulphide oxidoreductase CP439_RS02090 PF02720 Domain of unknown function (DUF222) CP439_RS02135 PF02770 Acyl-CoA dehydrogenase, middle domain CP439_RS02135 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CP439_RS02135 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CP439_RS02145 PF03176 MMPL family CP439_RS02150 PF05423 Mycobacterium membrane protein CP439_RS02155 PF00501 AMP-binding enzyme CP439_RS02160 PF00698 Acyl transferase domain CP439_RS02160 PF08240 Alcohol dehydrogenase GroES-like domain CP439_RS02160 PF16197 Ketoacyl-synthetase C-terminal extension CP439_RS02160 PF14765 Polyketide synthase dehydratase CP439_RS02160 PF02801 Beta-ketoacyl synthase, C-terminal domain CP439_RS02160 PF08659 KR domain CP439_RS02160 PF00550 Phosphopantetheine attachment site CP439_RS02160 PF14765 Polyketide synthase dehydratase CP439_RS02160 PF00698 Acyl transferase domain CP439_RS02160 PF08240 Alcohol dehydrogenase GroES-like domain CP439_RS02160 PF00109 Beta-ketoacyl synthase, N-terminal domain CP439_RS02160 PF00550 Phosphopantetheine attachment site CP439_RS02160 PF08659 KR domain CP439_RS02160 PF02801 Beta-ketoacyl synthase, C-terminal domain CP439_RS02160 PF16197 Ketoacyl-synthetase C-terminal extension CP439_RS02160 PF00109 Beta-ketoacyl synthase, N-terminal domain CP439_RS02165 PF00753 Metallo-beta-lactamase superfamily CP439_RS02170 PF00296 Luciferase-like monooxygenase CP439_RS02175 PF07085 DRTGG domain CP439_RS02175 PF01515 Phosphate acetyl/butaryl transferase CP439_RS02180 PF00871 Acetokinase family CP439_RS02185 PF16919 Protein kinase G rubredoxin domain CP439_RS02185 PF16918 Protein kinase G tetratricopeptide repeat CP439_RS02185 PF00069 Protein kinase domain CP439_RS02190 PF00497 Bacterial extracellular solute-binding proteins, family 3 CP439_RS02200 PF00293 NUDIX domain CP439_RS02205 PF02581 Thiamine monophosphate synthase CP439_RS02210 PF01266 FAD dependent oxidoreductase CP439_RS02220 PF05690 Thiazole biosynthesis protein ThiG CP439_RS02230 PF04389 Peptidase family M28 CP439_RS02230 PF02225 PA domain CP439_RS02250 PF08543 Phosphomethylpyrimidine kinase CP439_RS02255 PF13667 ThiC-associated domain CP439_RS02255 PF01964 Radical SAM ThiC family CP439_RS02265 PF00689 Cation transporting ATPase, C-terminus CP439_RS02285 PF01327 Polypeptide deformylase CP439_RS02300 PF00080 Copper/zinc superoxide dismutase (SODC) CP439_RS02305 PF04107 Glutamate-cysteine ligase family 2(GCS2) CP439_RS02315 PF01434 Peptidase family M41 CP439_RS02315 PF17862 AAA+ lid domain CP439_RS02315 PF00004 ATPase family associated with various cellular activities (AAA) CP439_RS02320 PF01066 CDP-alcohol phosphatidyltransferase CP439_RS02325 PF02666 Phosphatidylserine decarboxylase CP439_RS02330 PF03453 MoeA N-terminal region (domain I and II) CP439_RS02330 PF00994 Probable molybdopterin binding domain CP439_RS02330 PF03454 MoeA C-terminal region (domain IV) CP439_RS02335 PF00106 short chain dehydrogenase CP439_RS02340 PF00118 TCP-1/cpn60 chaperonin family CP439_RS02350 PF00823 PPE family CP439_RS02350 PF01469 Pentapeptide repeats (8 copies) CP439_RS02360 PF10099 Anti-sigma-K factor rskA CP439_RS02365 PF04542 Sigma-70 region 2 CP439_RS02365 PF04545 Sigma-70, region 4 CP439_RS02390 PF03176 MMPL family CP439_RS02395 PF05423 Mycobacterium membrane protein CP439_RS02410 PF00823 PPE family CP439_RS02425 PF00378 Enoyl-CoA hydratase/isomerase CP439_RS02430 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system CP439_RS02440 PF00326 Prolyl oligopeptidase family CP439_RS02440 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CP439_RS02445 PF00171 Aldehyde dehydrogenase family CP439_RS02465 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CP439_RS02465 PF07992 Pyridine nucleotide-disulphide oxidoreductase CP439_RS02480 PF06114 IrrE N-terminal-like domain CP439_RS02480 PF01381 Helix-turn-helix CP439_RS02480 PF09856 Predicted transcriptional regulator (DUF2083) CP439_RS02485 PF01643 Acyl-ACP thioesterase CP439_RS02490 PF00463 Isocitrate lyase family CP439_RS02495 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CP439_RS02495 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CP439_RS02520 PF00440 Bacterial regulatory proteins, tetR family CP439_RS02525 PF04286 Protein of unknown function (DUF445) CP439_RS02530 PF01381 Helix-turn-helix CP439_RS02540 PF10724 Protein of unknown function (DUF2516) CP439_RS02545 PF10783 Protein of unknown function (DUF2599) CP439_RS02550 PF01791 DeoC/LacD family aldolase CP439_RS02555 PF11209 Protein of unknown function (DUF2993) CP439_RS02560 PF00795 Carbon-nitrogen hydrolase CP439_RS02565 PF10698 Protein of unknown function (DUF2505) CP439_RS02570 PF01565 FAD binding domain CP439_RS02570 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CP439_RS02575 PF17964 Bacterial Ig domain CP439_RS02575 PF03734 L,D-transpeptidase catalytic domain CP439_RS02580 PF00106 short chain dehydrogenase CP439_RS02585 PF00480 ROK family CP439_RS02590 PF00534 Glycosyl transferases group 1 CP439_RS02590 PF13439 Glycosyltransferase Family 4 CP439_RS02595 PF10722 Putative bacterial sensory transduction regulator CP439_RS02600 PF01810 LysE type translocator CP439_RS02605 PF00300 Histidine phosphatase superfamily (branch 1) CP439_RS02610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CP439_RS02610 PF00512 His Kinase A (phospho-acceptor) domain CP439_RS02620 PF00486 Transcriptional regulatory protein, C terminal CP439_RS02620 PF00072 Response regulator receiver domain CP439_RS02625 PF00732 GMC oxidoreductase CP439_RS02625 PF05199 GMC oxidoreductase CP439_RS02640 PF07729 FCD domain CP439_RS02640 PF00392 Bacterial regulatory proteins, gntR family CP439_RS02650 PF02541 Ppx/GppA phosphatase family CP439_RS02660 PF01261 Xylose isomerase-like TIM barrel CP439_RS02670 PF03807 NADP oxidoreductase coenzyme F420-dependent CP439_RS02670 PF14748 Pyrroline-5-carboxylate reductase dimerisation CP439_RS02675 PF12728 Helix-turn-helix domain CP439_RS02680 PF08213 Mitochondrial domain of unknown function (DUF1713) CP439_RS02685 PF01370 NAD dependent epimerase/dehydratase family CP439_RS02690 PF01553 Acyltransferase CP439_RS02700 PF13452 N-terminal half of MaoC dehydratase CP439_RS02710 PF05423 Mycobacterium membrane protein CP439_RS02715 PF03176 MMPL family CP439_RS02720 PF05768 Glutaredoxin-like domain (DUF836) CP439_RS02725 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CP439_RS02725 PF01488 Shikimate / quinate 5-dehydrogenase CP439_RS02725 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CP439_RS02730 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CP439_RS02730 PF03900 Porphobilinogen deaminase, C-terminal domain CP439_RS02735 PF10414 Sirohaem synthase dimerisation region CP439_RS02735 PF14824 Sirohaem biosynthesis protein central CP439_RS02735 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CP439_RS02740 PF00490 Delta-aminolevulinic acid dehydratase CP439_RS02755 PF02720 Domain of unknown function (DUF222) CP439_RS02760 PF01740 STAS domain CP439_RS02765 PF01757 Acyltransferase family CP439_RS02770 PF13472 GDSL-like Lipase/Acylhydrolase family CP439_RS02785 PF08241 Methyltransferase domain CP439_RS02790 PF08241 Methyltransferase domain CP439_RS02795 PF00324 Amino acid permease CP439_RS02805 PF00202 Aminotransferase class-III CP439_RS02810 PF00300 Histidine phosphatase superfamily (branch 1) CP439_RS02820 PF02683 Cytochrome C biogenesis protein transmembrane region CP439_RS02830 PF01578 Cytochrome C assembly protein CP439_RS02835 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CP439_RS02855 PF00934 PE family CP439_RS02860 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CP439_RS02860 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CP439_RS02865 PF01040 UbiA prenyltransferase family CP439_RS02870 PF01048 Phosphorylase superfamily CP439_RS02875 PF01370 NAD dependent epimerase/dehydratase family CP439_RS02890 PF00535 Glycosyl transferase family 2 CP439_RS02905 PF00501 AMP-binding enzyme CP439_RS02905 PF13193 AMP-binding enzyme C-terminal domain CP439_RS02920 PF01384 Phosphate transporter family CP439_RS02930 PF00106 short chain dehydrogenase CP439_RS02935 PF00378 Enoyl-CoA hydratase/isomerase CP439_RS02940 PF01850 PIN domain CP439_RS02945 PF07362 Post-segregation antitoxin CcdA CP439_RS02950 PF13193 AMP-binding enzyme C-terminal domain CP439_RS02950 PF00501 AMP-binding enzyme CP439_RS02955 PF01979 Amidohydrolase family CP439_RS02960 PF18374 Enolase N-terminal domain-like CP439_RS02960 PF13378 Enolase C-terminal domain-like CP439_RS02965 PF12697 Alpha/beta hydrolase family CP439_RS02970 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CP439_RS02980 PF00534 Glycosyl transferases group 1 CP439_RS02980 PF13439 Glycosyltransferase Family 4 CP439_RS02985 PF01209 ubiE/COQ5 methyltransferase family CP439_RS02990 PF05305 Protein of unknown function (DUF732) CP439_RS02995 PF13847 Methyltransferase domain CP439_RS03000 PF01494 FAD binding domain CP439_RS03005 PF00348 Polyprenyl synthetase CP439_RS03010 PF01435 Peptidase family M48 CP439_RS03015 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CP439_RS03015 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CP439_RS03020 PF00743 Flavin-binding monooxygenase-like CP439_RS03025 PF04461 Protein of unknown function (DUF520) CP439_RS03035 PF16864 Dimerisation domain CP439_RS03035 PF00891 O-methyltransferase domain CP439_RS03040 PF00067 Cytochrome P450 CP439_RS03045 PF08940 Domain of unknown function (DUF1918) CP439_RS03050 PF00317 Ribonucleotide reductase, all-alpha domain CP439_RS03050 PF02867 Ribonucleotide reductase, barrel domain CP439_RS03050 PF03477 ATP cone domain CP439_RS03060 PF00156 Phosphoribosyl transferase domain CP439_RS03060 PF01738 Dienelactone hydrolase family CP439_RS03070 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CP439_RS03070 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CP439_RS03075 PF09587 Bacterial capsule synthesis protein PGA_cap CP439_RS03080 PF01494 FAD binding domain CP439_RS03085 PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain CP439_RS03090 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CP439_RS03090 PF18029 Glyoxalase-like domain CP439_RS03095 PF00934 PE family CP439_RS03115 PF01402 Ribbon-helix-helix protein, copG family CP439_RS03120 PF01850 PIN domain CP439_RS03125 PF10738 Probable lipoprotein LpqN CP439_RS03130 PF17678 Glycosyl hydrolase family 92 N-terminal domain CP439_RS03130 PF07971 Glycosyl hydrolase family 92 CP439_RS03140 PF00392 Bacterial regulatory proteins, gntR family CP439_RS03140 PF07729 FCD domain CP439_RS03150 PF02405 Permease MlaE CP439_RS03175 PF02470 MlaD protein CP439_RS03185 PF01850 PIN domain CP439_RS03190 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system CP439_RS03200 PF01850 PIN domain CP439_RS03205 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CP439_RS03210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CP439_RS03215 PF00672 HAMP domain CP439_RS03220 PF00486 Transcriptional regulatory protein, C terminal CP439_RS03220 PF00072 Response regulator receiver domain CP439_RS03235 PF00239 Resolvase, N terminal domain CP439_RS03240 PF12323 Helix-turn-helix domain CP439_RS03240 PF07282 Putative transposase DNA-binding domain CP439_RS03240 PF01385 Probable transposase CP439_RS03250 PF07704 Rv0623-like transcription factor CP439_RS03255 PF01850 PIN domain CP439_RS03290 PF07516 SecA Wing and Scaffold domain CP439_RS03290 PF01043 SecA preprotein cross-linking domain CP439_RS03290 PF07517 SecA DEAD-like domain CP439_RS03290 PF02810 SEC-C motif CP439_RS03315 PF01850 PIN domain CP439_RS03320 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain CP439_RS03320 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain CP439_RS03325 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain CP439_RS03325 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain CP439_RS03330 PF08544 GHMP kinases C terminal CP439_RS03330 PF00288 GHMP kinases N terminal domain CP439_RS03330 PF10509 Galactokinase galactose-binding signature CP439_RS03350 PF07704 Rv0623-like transcription factor CP439_RS03355 PF01850 PIN domain CP439_RS03360 PF09335 SNARE associated Golgi protein CP439_RS03365 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system CP439_RS03370 PF01850 PIN domain CP439_RS03375 PF10442 FIST C domain CP439_RS03375 PF08495 FIST N domain CP439_RS03380 PF13538 UvrD-like helicase C-terminal domain CP439_RS03385 PF12705 PD-(D/E)XK nuclease superfamily CP439_RS03385 PF00580 UvrD/REP helicase N-terminal domain CP439_RS03385 PF13361 UvrD-like helicase C-terminal domain CP439_RS03390 PF17946 RecC C-terminal domain CP439_RS03395 PF00378 Enoyl-CoA hydratase/isomerase CP439_RS03405 PF00753 Metallo-beta-lactamase superfamily CP439_RS03410 PF09957 Bacterial antitoxin of type II TA system, VapB CP439_RS03425 PF00471 Ribosomal protein L33 CP439_RS03430 PF13452 N-terminal half of MaoC dehydratase CP439_RS03435 PF01575 MaoC like domain CP439_RS03440 PF13452 N-terminal half of MaoC dehydratase CP439_RS03450 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CP439_RS03455 PF02357 Transcription termination factor nusG CP439_RS03460 PF03946 Ribosomal protein L11, N-terminal domain CP439_RS03460 PF00298 Ribosomal protein L11, RNA binding domain CP439_RS03465 PF00687 Ribosomal protein L1p/L10e family CP439_RS03490 PF00561 alpha/beta hydrolase fold CP439_RS03495 PF03109 ABC1 family CP439_RS03510 PF00480 ROK family CP439_RS03515 PF00466 Ribosomal protein L10 CP439_RS03520 PF16320 Ribosomal protein L7/L12 dimerisation domain CP439_RS03520 PF00542 Ribosomal protein L7/L12 C-terminal domain CP439_RS03525 PF13305 Tetracyclin repressor-like, C-terminal domain CP439_RS03525 PF00440 Bacterial regulatory proteins, tetR family CP439_RS03530 PF03055 Retinal pigment epithelial membrane protein CP439_RS03535 PF00005 ABC transporter CP439_RS03545 PF09957 Bacterial antitoxin of type II TA system, VapB CP439_RS03555 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system CP439_RS03560 PF01402 Ribbon-helix-helix protein, copG family CP439_RS03565 PF01850 PIN domain CP439_RS03575 PF00884 Sulfatase CP439_RS03585 PF01850 PIN domain CP439_RS03600 PF00562 RNA polymerase Rpb2, domain 6 CP439_RS03600 PF04560 RNA polymerase Rpb2, domain 7 CP439_RS03600 PF04565 RNA polymerase Rpb2, domain 3 CP439_RS03600 PF04561 RNA polymerase Rpb2, domain 2 CP439_RS03600 PF04563 RNA polymerase beta subunit CP439_RS03600 PF10385 RNA polymerase beta subunit external 1 domain CP439_RS03605 PF04997 RNA polymerase Rpb1, domain 1 CP439_RS03605 PF00623 RNA polymerase Rpb1, domain 2 CP439_RS03605 PF05000 RNA polymerase Rpb1, domain 4 CP439_RS03605 PF04983 RNA polymerase Rpb1, domain 3 CP439_RS03605 PF04998 RNA polymerase Rpb1, domain 5 CP439_RS03615 PF04734 Neutral/alkaline non-lysosomal ceramidase, N-terminal CP439_RS03615 PF17048 Neutral/alkaline non-lysosomal ceramidase, C-terminal CP439_RS03620 PF01261 Xylose isomerase-like TIM barrel CP439_RS03625 PF10503 Esterase PHB depolymerase CP439_RS03630 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CP439_RS03630 PF02770 Acyl-CoA dehydrogenase, middle domain CP439_RS03630 PF18158 Adaptive response protein AidB N-terminal domain CP439_RS03635 PF00378 Enoyl-CoA hydratase/isomerase CP439_RS03645 PF00378 Enoyl-CoA hydratase/isomerase CP439_RS03655 PF05423 Mycobacterium membrane protein CP439_RS03675 PF00440 Bacterial regulatory proteins, tetR family CP439_RS03675 PF13305 Tetracyclin repressor-like, C-terminal domain CP439_RS03680 PF00164 Ribosomal protein S12/S23 CP439_RS03685 PF00177 Ribosomal protein S7p/S5e CP439_RS03690 PF14492 Elongation Factor G, domain II CP439_RS03690 PF00009 Elongation factor Tu GTP binding domain CP439_RS03690 PF03764 Elongation factor G, domain IV CP439_RS03690 PF00679 Elongation factor G C-terminus CP439_RS03690 PF03144 Elongation factor Tu domain 2 CP439_RS03695 PF03143 Elongation factor Tu C-terminal domain CP439_RS03695 PF00009 Elongation factor Tu GTP binding domain CP439_RS03695 PF03144 Elongation factor Tu domain 2 CP439_RS03710 PF07992 Pyridine nucleotide-disulphide oxidoreductase CP439_RS03710 PF14759 Reductase C-terminal CP439_RS03730 PF17754 MftR C-terminal domain CP439_RS03730 PF00440 Bacterial regulatory proteins, tetR family CP439_RS03745 PF13186 Iron-sulfur cluster-binding domain CP439_RS03745 PF04055 Radical SAM superfamily CP439_RS03750 PF01070 FMN-dependent dehydrogenase CP439_RS03755 PF02633 Creatinine amidohydrolase CP439_RS03760 PF00535 Glycosyl transferase family 2 CP439_RS03765 PF00732 GMC oxidoreductase CP439_RS03765 PF05199 GMC oxidoreductase CP439_RS03775 PF01610 Transposase CP439_RS03775 PF13542 Helix-turn-helix domain of transposase family ISL3 CP439_RS03775 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 CP439_RS03795 PF00338 Ribosomal protein S10p/S20e CP439_RS03800 PF00297 Ribosomal protein L3 CP439_RS03805 PF00573 Ribosomal protein L4/L1 family CP439_RS03810 PF00276 Ribosomal protein L23 CP439_RS03815 PF00181 Ribosomal Proteins L2, RNA binding domain CP439_RS03815 PF03947 Ribosomal Proteins L2, C-terminal domain CP439_RS03820 PF00203 Ribosomal protein S19 CP439_RS03825 PF00237 Ribosomal protein L22p/L17e CP439_RS03830 PF00189 Ribosomal protein S3, C-terminal domain CP439_RS03830 PF07650 KH domain CP439_RS03835 PF00252 Ribosomal protein L16p/L10e CP439_RS03840 PF00831 Ribosomal L29 protein CP439_RS03845 PF00366 Ribosomal protein S17 CP439_RS03850 PF00884 Sulfatase CP439_RS03855 PF03781 Sulfatase-modifying factor enzyme 1 CP439_RS03865 PF00238 Ribosomal protein L14p/L23e CP439_RS03870 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CP439_RS03870 PF00467 KOW motif CP439_RS03875 PF00281 Ribosomal protein L5 CP439_RS03875 PF00673 ribosomal L5P family C-terminus CP439_RS03880 PF00253 Ribosomal protein S14p/S29e CP439_RS03885 PF00410 Ribosomal protein S8 CP439_RS03890 PF00347 Ribosomal protein L6 CP439_RS03895 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CP439_RS03900 PF00333 Ribosomal protein S5, N-terminal domain CP439_RS03900 PF03719 Ribosomal protein S5, C-terminal domain CP439_RS03905 PF00327 Ribosomal protein L30p/L7e CP439_RS03910 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CP439_RS03915 PF01343 Peptidase family S49 CP439_RS03920 PF04072 Leucine carboxyl methyltransferase CP439_RS03925 PF04072 Leucine carboxyl methyltransferase CP439_RS03930 PF00596 Class II Aldolase and Adducin N-terminal domain CP439_RS03935 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CP439_RS03935 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CP439_RS03940 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CP439_RS03940 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CP439_RS03950 PF04072 Leucine carboxyl methyltransferase CP439_RS03955 PF00344 SecY translocase CP439_RS03965 PF00557 Metallopeptidase family M24 CP439_RS03970 PF04545 Sigma-70, region 4 CP439_RS03970 PF04542 Sigma-70 region 2 CP439_RS03975 PF13490 Putative zinc-finger CP439_RS03995 PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain CP439_RS04005 PF10774 Domain of unknown function (DUF4226) CP439_RS04020 PF00934 PE family CP439_RS04035 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CP439_RS04035 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CP439_RS04045 PF00934 PE family CP439_RS04045 PF00934 PE family CP439_RS04055 PF00934 PE family CP439_RS04060 PF01402 Ribbon-helix-helix protein, copG family CP439_RS04065 PF01850 PIN domain CP439_RS04080 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CP439_RS04080 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CP439_RS04085 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CP439_RS04085 PF02770 Acyl-CoA dehydrogenase, middle domain CP439_RS04085 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CP439_RS04090 PF00171 Aldehyde dehydrogenase family CP439_RS04095 PF00934 PE family CP439_RS04095 PF00300 Histidine phosphatase superfamily (branch 1) CP439_RS04100 PF01469 Pentapeptide repeats (8 copies) CP439_RS04100 PF00823 PPE family CP439_RS04120 PF00486 Transcriptional regulatory protein, C terminal CP439_RS04120 PF00072 Response regulator receiver domain CP439_RS04125 PF00512 His Kinase A (phospho-acceptor) domain CP439_RS04125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CP439_RS04125 PF00672 HAMP domain CP439_RS04130 PF01230 HIT domain CP439_RS04140 PF08240 Alcohol dehydrogenase GroES-like domain CP439_RS04140 PF00107 Zinc-binding dehydrogenase CP439_RS04155 PF00067 Cytochrome P450 CP439_RS04165 PF00067 Cytochrome P450 CP439_RS04170 PF00440 Bacterial regulatory proteins, tetR family CP439_RS04175 PF00171 Aldehyde dehydrogenase family CP439_RS04185 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CP439_RS04185 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CP439_RS04195 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CP439_RS04195 PF02843 Phosphoribosylglycinamide synthetase, C domain CP439_RS04195 PF02844 Phosphoribosylglycinamide synthetase, N domain CP439_RS04220 PF00206 Lyase CP439_RS04220 PF10397 Adenylosuccinate lyase C-terminus CP439_RS04225 PF00067 Cytochrome P450 CP439_RS04235 PF01259 SAICAR synthetase CP439_RS04240 PF00326 Prolyl oligopeptidase family CP439_RS04240 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CP439_RS04250 PF07690 Major Facilitator Superfamily CP439_RS04260 PF00890 FAD binding domain CP439_RS04275 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase CP439_RS04295 PF00296 Luciferase-like monooxygenase CP439_RS04300 PF07702 UTRA domain CP439_RS04300 PF00392 Bacterial regulatory proteins, gntR family CP439_RS04305 PF03992 Antibiotic biosynthesis monooxygenase CP439_RS04310 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CP439_RS04310 PF07992 Pyridine nucleotide-disulphide oxidoreductase CP439_RS04325 PF02371 Transposase IS116/IS110/IS902 family CP439_RS04325 PF01548 Transposase CP439_RS04330 PF04454 Encapsulating protein for peroxidase CP439_RS04335 PF04261 Dyp-type peroxidase family CP439_RS04340 PF02127 Aminopeptidase I zinc metalloprotease (M18) CP439_RS04350 PF13302 Acetyltransferase (GNAT) domain CP439_RS04355 PF02769 AIR synthase related protein, C-terminal domain CP439_RS04355 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CP439_RS04355 PF00586 AIR synthase related protein, N-terminal domain CP439_RS04365 PF00149 Calcineurin-like phosphoesterase CP439_RS04370 PF17101 Stealth protein CR1, conserved region 1 CP439_RS04370 PF17103 Stealth protein CR4, conserved region 4 CP439_RS04370 PF11380 Stealth protein CR2, conserved region 2 CP439_RS04370 PF17102 Stealth protein CR3, conserved region 3 CP439_RS04380 PF00156 Phosphoribosyl transferase domain CP439_RS04385 PF00586 AIR synthase related protein, N-terminal domain CP439_RS04385 PF02769 AIR synthase related protein, C-terminal domain CP439_RS04405 PF08768 Domain of unknown function (DUF1794) CP439_RS04415 PF07210 Protein of unknown function (DUF1416) CP439_RS04420 PF00581 Rhodanese-like domain CP439_RS04425 PF00085 Thioredoxin CP439_RS04435 PF00486 Transcriptional regulatory protein, C terminal CP439_RS04440 PF00583 Acetyltransferase (GNAT) family CP439_RS04445 PF00005 ABC transporter CP439_RS04450 PF01895 PhoU domain CP439_RS04460 PF01207 Dihydrouridine synthase (Dus) CP439_RS04465 PF03405 Fatty acid desaturase CP439_RS04480 PF01022 Bacterial regulatory protein, arsR family CP439_RS04485 PF14437 MafB19-like deaminase CP439_RS04490 PF12323 Helix-turn-helix domain CP439_RS04490 PF07282 Putative transposase DNA-binding domain CP439_RS04490 PF01385 Probable transposase CP439_RS04495 PF04072 Leucine carboxyl methyltransferase CP439_RS04525 PF00934 PE family CP439_RS04530 PF00934 PE family CP439_RS04540 PF00934 PE family CP439_RS04580 PF00561 alpha/beta hydrolase fold CP439_RS04600 PF00676 Dehydrogenase E1 component CP439_RS04605 PF00072 Response regulator receiver domain CP439_RS04605 PF00196 Bacterial regulatory proteins, luxR family CP439_RS04615 PF07732 Multicopper oxidase CP439_RS04615 PF07731 Multicopper oxidase CP439_RS04615 PF00394 Multicopper oxidase CP439_RS04625 PF00291 Pyridoxal-phosphate dependent enzyme CP439_RS04640 PF00106 short chain dehydrogenase CP439_RS04655 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CP439_RS04655 PF00205 Thiamine pyrophosphate enzyme, central domain CP439_RS04655 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CP439_RS04665 PF02515 CoA-transferase family III CP439_RS04680 PF00155 Aminotransferase class I and II CP439_RS04685 PF00108 Thiolase, N-terminal domain CP439_RS04685 PF02803 Thiolase, C-terminal domain CP439_RS04690 PF00378 Enoyl-CoA hydratase/isomerase CP439_RS04690 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CP439_RS04690 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CP439_RS04710 PF01967 MoaC family CP439_RS04715 PF00994 Probable molybdopterin binding domain CP439_RS04720 PF02391 MoaE protein CP439_RS04725 PF06737 Transglycosylase-like domain CP439_RS04735 PF06463 Molybdenum Cofactor Synthesis C CP439_RS04735 PF04055 Radical SAM superfamily CP439_RS04740 PF03733 Inner membrane component domain CP439_RS04745 PF00313 'Cold-shock' DNA-binding domain CP439_RS04750 PF00934 PE family CP439_RS04760 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CP439_RS04760 PF02770 Acyl-CoA dehydrogenase, middle domain CP439_RS04760 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CP439_RS04765 PF08495 FIST N domain CP439_RS04765 PF10442 FIST C domain CP439_RS04770 PF10969 Protein of unknown function (DUF2771) CP439_RS04775 PF07690 Major Facilitator Superfamily CP439_RS04780 PF11228 Protein of unknown function (DUF3027) CP439_RS04785 PF00823 PPE family CP439_RS04785 PF01469 Pentapeptide repeats (8 copies) CP439_RS04790 PF10745 Protein of unknown function (DUF2530) CP439_RS04795 PF01047 MarR family CP439_RS04800 PF00588 SpoU rRNA Methylase family CP439_RS04805 PF10801 Protein of unknown function (DUF2537) CP439_RS04810 PF11268 Protein of unknown function (DUF3071) CP439_RS04815 PF00266 Aminotransferase class-V CP439_RS04820 PF11583 P-aminobenzoate N-oxygenase AurF CP439_RS04825 PF00037 4Fe-4S binding domain CP439_RS04825 PF07992 Pyridine nucleotide-disulphide oxidoreductase CP439_RS04830 PF18029 Glyoxalase-like domain CP439_RS04840 PF03372 Endonuclease/Exonuclease/phosphatase family CP439_RS04845 PF00285 Citrate synthase, C-terminal domain CP439_RS04850 PF00196 Bacterial regulatory proteins, luxR family CP439_RS04855 PF00211 Adenylate and Guanylate cyclase catalytic domain CP439_RS04865 PF00743 Flavin-binding monooxygenase-like CP439_RS04870 PF04072 Leucine carboxyl methyltransferase CP439_RS04880 PF06974 Protein of unknown function (DUF1298) CP439_RS04880 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain CP439_RS04885 PF00285 Citrate synthase, C-terminal domain CP439_RS04895 PF10944 Protein of unknown function (DUF2630) CP439_RS04900 PF04972 BON domain CP439_RS04900 PF00691 OmpA family CP439_RS04915 PF00672 HAMP domain CP439_RS04915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CP439_RS04915 PF00512 His Kinase A (phospho-acceptor) domain CP439_RS04920 PF00486 Transcriptional regulatory protein, C terminal CP439_RS04920 PF00072 Response regulator receiver domain CP439_RS04925 PF01039 Carboxyl transferase domain CP439_RS04930 PF00378 Enoyl-CoA hydratase/isomerase CP439_RS04935 PF12706 Beta-lactamase superfamily domain CP439_RS04950 PF14013 MT0933-like antitoxin protein CP439_RS04955 PF10604 Polyketide cyclase / dehydrase and lipid transport CP439_RS04975 PF03055 Retinal pigment epithelial membrane protein CP439_RS04980 PF00108 Thiolase, N-terminal domain CP439_RS04980 PF02803 Thiolase, C-terminal domain CP439_RS04985 PF00823 PPE family CP439_RS04985 PF12484 Polymorphic PE/PPE proteins C terminal CP439_RS04995 PF02028 BCCT, betaine/carnitine/choline family transporter CP439_RS05020 PF00872 Transposase, Mutator family CP439_RS05025 PF00239 Resolvase, N terminal domain CP439_RS05030 PF07282 Putative transposase DNA-binding domain CP439_RS05030 PF12323 Helix-turn-helix domain CP439_RS05030 PF01385 Probable transposase CP439_RS05040 PF01566 Natural resistance-associated macrophage protein CP439_RS05040 PF03358 NADPH-dependent FMN reductase CP439_RS05045 PF01566 Natural resistance-associated macrophage protein CP439_RS05045 PF03358 NADPH-dependent FMN reductase CP439_RS05060 PF12849 PBP superfamily domain CP439_RS05065 PF00528 Binding-protein-dependent transport system inner membrane component CP439_RS05070 PF00528 Binding-protein-dependent transport system inner membrane component CP439_RS05075 PF01436 NHL repeat CP439_RS05075 PF00069 Protein kinase domain CP439_RS05075 PF08450 SMP-30/Gluconolactonase/LRE-like region CP439_RS05080 PF12849 PBP superfamily domain CP439_RS05085 PF00005 ABC transporter CP439_RS05090 PF12849 PBP superfamily domain CP439_RS05095 PF00528 Binding-protein-dependent transport system inner membrane component CP439_RS05100 PF00528 Binding-protein-dependent transport system inner membrane component CP439_RS05105 PF02735 Ku70/Ku80 beta-barrel domain CP439_RS05110 PF01068 ATP dependent DNA ligase domain CP439_RS05110 PF04679 ATP dependent DNA ligase C terminal region CP439_RS05110 PF13298 DNA polymerase Ligase (LigD) CP439_RS05120 PF00296 Luciferase-like monooxygenase CP439_RS05135 PF16170 Domain of unknown function (DUF4873) CP439_RS05140 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CP439_RS05140 PF06827 Zinc finger found in FPG and IleRS CP439_RS05145 PF00106 short chain dehydrogenase CP439_RS05150 PF00342 Phosphoglucose isomerase CP439_RS05155 PF00756 Putative esterase CP439_RS05160 PF00756 Putative esterase CP439_RS05170 PF01817 Chorismate mutase type II CP439_RS05175 PF00580 UvrD/REP helicase N-terminal domain CP439_RS05175 PF13361 UvrD-like helicase C-terminal domain CP439_RS05180 PF01551 Peptidase family M23 CP439_RS05185 PF00549 CoA-ligase CP439_RS05185 PF08442 ATP-grasp domain CP439_RS05190 PF00549 CoA-ligase CP439_RS05190 PF02629 CoA binding domain CP439_RS05195 PF00296 Luciferase-like monooxygenase CP439_RS05205 PF17270 Family of unknown function (DUF5336) CP439_RS05215 PF00551 Formyl transferase CP439_RS05220 PF01808 AICARFT/IMPCHase bienzyme CP439_RS05220 PF02142 MGS-like domain CP439_RS05225 PF01078 Magnesium chelatase, subunit ChlI CP439_RS05225 PF13335 Magnesium chelatase, subunit ChlI C-terminal CP439_RS05240 PF01850 PIN domain CP439_RS05250 PF16708 Lipoprotein confined to pathogenic Mycobacterium CP439_RS05255 PF06259 Alpha/beta hydrolase CP439_RS05270 PF08044 Domain of unknown function (DUF1707) CP439_RS05275 PF02583 Metal-sensitive transcriptional repressor CP439_RS05280 PF07371 Protein of unknown function (DUF1490) CP439_RS05290 PF17197 Domain of unknown function (DUF5134) CP439_RS05295 PF00378 Enoyl-CoA hydratase/isomerase CP439_RS05300 PF02770 Acyl-CoA dehydrogenase, middle domain CP439_RS05300 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CP439_RS05300 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CP439_RS05305 PF02785 Biotin carboxylase C-terminal domain CP439_RS05305 PF00289 Biotin carboxylase, N-terminal domain CP439_RS05305 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CP439_RS05305 PF00364 Biotin-requiring enzyme CP439_RS05310 PF01039 Carboxyl transferase domain CP439_RS05315 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CP439_RS05315 PF02770 Acyl-CoA dehydrogenase, middle domain CP439_RS05315 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CP439_RS05325 PF00934 PE family CP439_RS05335 PF01436 NHL repeat CP439_RS05335 PF00934 PE family CP439_RS05345 PF01783 Ribosomal L32p protein family CP439_RS05350 PF00934 PE family CP439_RS05350 PF01436 NHL repeat CP439_RS05355 PF00072 Response regulator receiver domain CP439_RS05355 PF00486 Transcriptional regulatory protein, C terminal CP439_RS05360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CP439_RS05360 PF00512 His Kinase A (phospho-acceptor) domain CP439_RS05360 PF00672 HAMP domain CP439_RS05365 PF13180 PDZ domain CP439_RS05370 PF01967 MoaC family CP439_RS05370 PF00994 Probable molybdopterin binding domain CP439_RS05375 PF01741 Large-conductance mechanosensitive channel, MscL CP439_RS05380 PF00005 ABC transporter CP439_RS05385 PF02687 FtsX-like permease family CP439_RS05385 PF12704 MacB-like periplasmic core domain CP439_RS05395 PF00348 Polyprenyl synthetase CP439_RS05410 PF01812 5-formyltetrahydrofolate cyclo-ligase family CP439_RS05415 PF00483 Nucleotidyl transferase CP439_RS05420 PF03454 MoeA C-terminal region (domain IV) CP439_RS05420 PF00994 Probable molybdopterin binding domain CP439_RS05420 PF03453 MoeA N-terminal region (domain I and II) CP439_RS05460 PF00027 Cyclic nucleotide-binding domain CP439_RS05460 PF13302 Acetyltransferase (GNAT) domain CP439_RS05480 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase CP439_RS05480 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase CP439_RS05485 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CP439_RS05495 PF04715 Anthranilate synthase component I, N terminal region CP439_RS05495 PF00425 chorismate binding enzyme CP439_RS05505 PF09334 tRNA synthetases class I (M) CP439_RS05510 PF01026 TatD related DNase CP439_RS05515 PF06737 Transglycosylase-like domain CP439_RS05515 PF03990 G5-linked-Ubiquitin-like domain CP439_RS05515 PF07501 G5 domain CP439_RS05520 PF00398 Ribosomal RNA adenine dimethylase CP439_RS05525 PF08544 GHMP kinases C terminal CP439_RS05525 PF00288 GHMP kinases N terminal domain CP439_RS05540 PF00501 AMP-binding enzyme CP439_RS05540 PF14535 AMP-binding enzyme C-terminal domain CP439_RS05545 PF01195 Peptidyl-tRNA hydrolase CP439_RS05550 PF14693 Ribosomal protein TL5, C-terminal domain CP439_RS05550 PF01386 Ribosomal L25p family CP439_RS05555 PF10738 Probable lipoprotein LpqN CP439_RS05560 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CP439_RS05560 PF14572 Phosphoribosyl synthetase-associated domain CP439_RS05565 PF00132 Bacterial transferase hexapeptide (six repeats) CP439_RS05565 PF12804 MobA-like NTP transferase domain CP439_RS05575 PF00440 Bacterial regulatory proteins, tetR family CP439_RS05575 PF18665 Tetracyclin repressor-like, C-terminal domain CP439_RS05580 PF03461 TRCF domain CP439_RS05580 PF17757 UvrB interaction domain CP439_RS05580 PF00270 DEAD/DEAH box helicase CP439_RS05580 PF00271 Helicase conserved C-terminal domain CP439_RS05580 PF02559 CarD-like/TRCF domain CP439_RS05585 PF03819 MazG nucleotide pyrophosphohydrolase domain CP439_RS05595 PF00113 Enolase, C-terminal TIM barrel domain CP439_RS05595 PF03952 Enolase, N-terminal domain CP439_RS05610 PF02541 Ppx/GppA phosphatase family CP439_RS05620 PF00486 Transcriptional regulatory protein, C terminal CP439_RS05620 PF00072 Response regulator receiver domain CP439_RS05625 PF02702 Osmosensitive K+ channel His kinase sensor domain CP439_RS05625 PF13493 Domain of unknown function (DUF4118) CP439_RS05625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CP439_RS05625 PF00512 His Kinase A (phospho-acceptor) domain CP439_RS05625 PF00582 Universal stress protein family CP439_RS05640 PF03814 Potassium-transporting ATPase A subunit CP439_RS05650 PF02669 K+-transporting ATPase, c chain CP439_RS05655 PF00512 His Kinase A (phospho-acceptor) domain CP439_RS05655 PF00672 HAMP domain CP439_RS05655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CP439_RS05660 PF00072 Response regulator receiver domain CP439_RS05660 PF00486 Transcriptional regulatory protein, C terminal CP439_RS05670 PF06013 Proteins of 100 residues with WXG CP439_RS05675 PF06013 Proteins of 100 residues with WXG CP439_RS05680 PF12484 Polymorphic PE/PPE proteins C terminal CP439_RS05680 PF00823 PPE family CP439_RS05685 PF00934 PE family CP439_RS05710 PF17820 PDZ domain CP439_RS05710 PF18509 Magnetochrome domain CP439_RS05730 PF00872 Transposase, Mutator family CP439_RS05805 PF00501 AMP-binding enzyme CP439_RS05805 PF13193 AMP-binding enzyme C-terminal domain CP439_RS05830 PF01734 Patatin-like phospholipase CP439_RS05835 PF17301 Putative lipoprotein LpqV CP439_RS05850 PF00934 PE family CP439_RS05855 PF00934 PE family CP439_RS05865 PF00378 Enoyl-CoA hydratase/isomerase CP439_RS05885 PF02803 Thiolase, C-terminal domain CP439_RS05885 PF00108 Thiolase, N-terminal domain CP439_RS05890 PF13472 GDSL-like Lipase/Acylhydrolase family CP439_RS05895 PF07859 alpha/beta hydrolase fold CP439_RS05900 PF00291 Pyridoxal-phosphate dependent enzyme CP439_RS05900 PF00571 CBS domain CP439_RS05905 PF06271 RDD family CP439_RS05910 PF01053 Cys/Met metabolism PLP-dependent enzyme CP439_RS05915 PF01272 Transcription elongation factor, GreA/GreB, C-term CP439_RS05915 PF03449 Transcription elongation factor, N-terminal CP439_RS05925 PF02585 GlcNAc-PI de-N-acetylase CP439_RS05935 PF03190 Protein of unknown function, DUF255 CP439_RS05940 PF03006 Haemolysin-III related CP439_RS05945 PF01255 Putative undecaprenyl diphosphate synthase CP439_RS05955 PF00934 PE family CP439_RS05960 PF01255 Putative undecaprenyl diphosphate synthase CP439_RS05965 PF00934 PE family CP439_RS05995 PF00485 Phosphoribulokinase / Uridine kinase family CP439_RS06000 PF00464 Serine hydroxymethyltransferase CP439_RS06005 PF03405 Fatty acid desaturase CP439_RS06010 PF02562 PhoH-like protein CP439_RS06010 PF13638 PIN domain CP439_RS06015 PF01522 Polysaccharide deacetylase CP439_RS06025 PF10415 Fumarase C C-terminus CP439_RS06025 PF00206 Lyase CP439_RS06030 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CP439_RS06040 PF01594 AI-2E family transporter CP439_RS06045 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system CP439_RS06060 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family CP439_RS06065 PF02609 Exonuclease VII small subunit CP439_RS06070 PF13742 OB-fold nucleic acid binding domain CP439_RS06070 PF02601 Exonuclease VII, large subunit CP439_RS06080 PF02401 LytB protein CP439_RS06090 PF01926 50S ribosome-binding GTPase CP439_RS06090 PF06071 Protein of unknown function (DUF933) CP439_RS06095 PF09957 Bacterial antitoxin of type II TA system, VapB CP439_RS06100 PF01850 PIN domain CP439_RS06135 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CP439_RS06135 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CP439_RS06140 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CP439_RS06140 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CP439_RS06150 PF00561 alpha/beta hydrolase fold CP439_RS06165 PF00391 PEP-utilising enzyme, mobile domain CP439_RS06165 PF02896 PEP-utilising enzyme, TIM barrel domain CP439_RS06165 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CP439_RS06170 PF02720 Domain of unknown function (DUF222) CP439_RS06175 PF01381 Helix-turn-helix CP439_RS06175 PF06114 IrrE N-terminal-like domain CP439_RS06175 PF09856 Predicted transcriptional regulator (DUF2083) CP439_RS06180 PF03972 MmgE/PrpD family CP439_RS06185 PF00285 Citrate synthase, C-terminal domain CP439_RS06195 PF01717 Cobalamin-independent synthase, Catalytic domain CP439_RS06195 PF08267 Cobalamin-independent synthase, N-terminal domain CP439_RS06205 PF01469 Pentapeptide repeats (8 copies) CP439_RS06205 PF00823 PPE family CP439_RS06210 PF00108 Thiolase, N-terminal domain CP439_RS06210 PF02803 Thiolase, C-terminal domain CP439_RS06225 PF01494 FAD binding domain CP439_RS06230 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family CP439_RS06245 PF00378 Enoyl-CoA hydratase/isomerase CP439_RS06250 PF00378 Enoyl-CoA hydratase/isomerase CP439_RS06255 PF02515 CoA-transferase family III CP439_RS06260 PF00106 short chain dehydrogenase CP439_RS06270 PF03176 MMPL family CP439_RS06275 PF03176 MMPL family CP439_RS06300 PF01844 HNH endonuclease CP439_RS06300 PF02720 Domain of unknown function (DUF222) CP439_RS06310 PF02146 Sir2 family CP439_RS06320 PF04072 Leucine carboxyl methyltransferase CP439_RS06330 PF01243 Pyridoxamine 5'-phosphate oxidase CP439_RS06335 PF17227 Family of unknown function (DUF5302) CP439_RS06360 PF09594 Glycosyltransferase family 87 CP439_RS06365 PF01329 Pterin 4 alpha carbinolamine dehydratase CP439_RS06370 PF00293 NUDIX domain CP439_RS06375 PF00384 Molybdopterin oxidoreductase CP439_RS06375 PF01568 Molydopterin dinucleotide binding domain CP439_RS06380 PF13247 4Fe-4S dicluster domain CP439_RS06380 PF14711 Respiratory nitrate reductase beta C-terminal CP439_RS06385 PF00384 Molybdopterin oxidoreductase CP439_RS06385 PF02613 Nitrate reductase delta subunit CP439_RS06385 PF02665 Nitrate reductase gamma subunit CP439_RS06390 PF02613 Nitrate reductase delta subunit CP439_RS06390 PF00384 Molybdopterin oxidoreductase CP439_RS06390 PF02665 Nitrate reductase gamma subunit CP439_RS06395 PF00009 Elongation factor Tu GTP binding domain CP439_RS06395 PF00679 Elongation factor G C-terminus CP439_RS06395 PF03144 Elongation factor Tu domain 2 CP439_RS06395 PF14492 Elongation Factor G, domain II CP439_RS06400 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CP439_RS06410 PF12484 Polymorphic PE/PPE proteins C terminal CP439_RS06410 PF00823 PPE family CP439_RS06415 PF00934 PE family CP439_RS06420 PF02585 GlcNAc-PI de-N-acetylase CP439_RS06430 PF00934 PE family CP439_RS06435 PF04055 Radical SAM superfamily CP439_RS06445 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CP439_RS06445 PF07992 Pyridine nucleotide-disulphide oxidoreductase CP439_RS06455 PF00037 4Fe-4S binding domain CP439_RS06460 PF00155 Aminotransferase class I and II CP439_RS06470 PF08240 Alcohol dehydrogenase GroES-like domain CP439_RS06470 PF00107 Zinc-binding dehydrogenase CP439_RS06470 PF02801 Beta-ketoacyl synthase, C-terminal domain CP439_RS06470 PF00550 Phosphopantetheine attachment site CP439_RS06470 PF14765 Polyketide synthase dehydratase CP439_RS06470 PF16197 Ketoacyl-synthetase C-terminal extension CP439_RS06470 PF08659 KR domain CP439_RS06470 PF00698 Acyl transferase domain CP439_RS06470 PF00109 Beta-ketoacyl synthase, N-terminal domain CP439_RS06475 PF00668 Condensation domain CP439_RS06480 PF03176 MMPL family CP439_RS06485 PF08237 PE-PPE domain CP439_RS06490 PF00501 AMP-binding enzyme CP439_RS06495 PF17853 GGDEF-like domain CP439_RS06495 PF06018 CodY GAF-like domain CP439_RS06495 PF13556 PucR C-terminal helix-turn-helix domain CP439_RS06500 PF00171 Aldehyde dehydrogenase family CP439_RS06505 PF01619 Proline dehydrogenase CP439_RS06515 PF00561 alpha/beta hydrolase fold CP439_RS06530 PF13193 AMP-binding enzyme C-terminal domain CP439_RS06530 PF00501 AMP-binding enzyme CP439_RS06545 PF00934 PE family CP439_RS06550 PF12484 Polymorphic PE/PPE proteins C terminal CP439_RS06550 PF00823 PPE family CP439_RS06555 PF06013 Proteins of 100 residues with WXG CP439_RS06560 PF06013 Proteins of 100 residues with WXG CP439_RS06565 PF00872 Transposase, Mutator family CP439_RS06575 PF07690 Major Facilitator Superfamily CP439_RS06575 PF00083 Sugar (and other) transporter CP439_RS06580 PF14602 Hexapeptide repeat of succinyl-transferase CP439_RS06580 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle CP439_RS06585 PF01546 Peptidase family M20/M25/M40 CP439_RS06585 PF07687 Peptidase dimerisation domain CP439_RS06600 PF03641 Possible lysine decarboxylase CP439_RS06605 PF00501 AMP-binding enzyme CP439_RS06605 PF13193 AMP-binding enzyme C-terminal domain CP439_RS06610 PF00809 Pterin binding enzyme CP439_RS06615 PF00535 Glycosyl transferase family 2 CP439_RS06625 PF00958 GMP synthase C terminal domain CP439_RS06625 PF00117 Glutamine amidotransferase class-I CP439_RS06625 PF13673 Acetyltransferase (GNAT) domain CP439_RS06625 PF03352 Methyladenine glycosylase CP439_RS06625 PF13302 Acetyltransferase (GNAT) domain CP439_RS06635 PF13439 Glycosyltransferase Family 4 CP439_RS06635 PF00534 Glycosyl transferases group 1 CP439_RS06640 PF00483 Nucleotidyl transferase CP439_RS06645 PF00934 PE family CP439_RS06665 PF13732 Domain of unknown function (DUF4162) CP439_RS06665 PF00005 ABC transporter CP439_RS06670 PF17933 Tetracyclin repressor-like, C-terminal domain CP439_RS06670 PF00440 Bacterial regulatory proteins, tetR family CP439_RS06675 PF01596 O-methyltransferase CP439_RS06680 PF08281 Sigma-70, region 4 CP439_RS06680 PF04542 Sigma-70 region 2 CP439_RS06695 PF13180 PDZ domain CP439_RS06700 PF02416 mttA/Hcf106 family CP439_RS06705 PF13419 Haloacid dehalogenase-like hydrolase CP439_RS06730 PF10609 NUBPL iron-transfer P-loop NTPase CP439_RS06730 PF01883 Iron-sulfur cluster assembly protein CP439_RS06745 PF01769 Divalent cation transporter CP439_RS06745 PF03448 MgtE intracellular N domain CP439_RS06745 PF00571 CBS domain CP439_RS06760 PF01547 Bacterial extracellular solute-binding protein CP439_RS06765 PF00528 Binding-protein-dependent transport system inner membrane component CP439_RS06770 PF00528 Binding-protein-dependent transport system inner membrane component CP439_RS06775 PF17912 MalK OB fold domain CP439_RS06775 PF00005 ABC transporter CP439_RS06780 PF01544 CorA-like Mg2+ transporter protein CP439_RS06785 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CP439_RS06785 PF00056 lactate/malate dehydrogenase, NAD binding domain CP439_RS06795 PF01850 PIN domain CP439_RS06800 PF00934 PE family CP439_RS06815 PF00106 short chain dehydrogenase CP439_RS06820 PF05016 ParE toxin of type II toxin-antitoxin system, parDE CP439_RS06825 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system CP439_RS06830 PF00676 Dehydrogenase E1 component CP439_RS06830 PF02779 Transketolase, pyrimidine binding domain CP439_RS06830 PF16078 2-oxoglutarate dehydrogenase N-terminus CP439_RS06830 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CP439_RS06830 PF16870 2-oxoglutarate dehydrogenase C-terminal CP439_RS06840 PF07690 Major Facilitator Superfamily CP439_RS06850 PF14041 LppP/LprE lipoprotein CP439_RS06855 PF03880 DbpA RNA binding domain CP439_RS06855 PF00271 Helicase conserved C-terminal domain CP439_RS06855 PF00270 DEAD/DEAH box helicase CP439_RS06865 PF00440 Bacterial regulatory proteins, tetR family CP439_RS06870 PF00067 Cytochrome P450 CP439_RS06875 PF02913 FAD linked oxidases, C-terminal domain CP439_RS06875 PF01565 FAD binding domain CP439_RS06880 PF07690 Major Facilitator Superfamily CP439_RS06885 PF03167 Uracil DNA glycosylase superfamily CP439_RS06890 PF01494 FAD binding domain CP439_RS06895 PF04075 F420H(2)-dependent quinone reductase CP439_RS06900 PF01230 HIT domain CP439_RS06905 PF01425 Amidase CP439_RS06910 PF00211 Adenylate and Guanylate cyclase catalytic domain CP439_RS06910 PF16701 Adenylate cyclase regulatory domain CP439_RS06920 PF14032 PknH-like extracellular domain CP439_RS06920 PF00069 Protein kinase domain CP439_RS06925 PF00486 Transcriptional regulatory protein, C terminal CP439_RS06925 PF03704 Bacterial transcriptional activator domain CP439_RS06925 PF00498 FHA domain CP439_RS06935 PF13529 Peptidase_C39 like family CP439_RS06940 PF13827 Domain of unknown function (DUF4189) CP439_RS06945 PF07161 LppX_LprAFG lipoprotein CP439_RS06950 PF05305 Protein of unknown function (DUF732) CP439_RS06955 PF00664 ABC transporter transmembrane region CP439_RS06955 PF00005 ABC transporter CP439_RS06960 PF00664 ABC transporter transmembrane region CP439_RS06960 PF00005 ABC transporter CP439_RS06965 PF12079 Protein of unknown function (DUF3558) CP439_RS06975 PF00300 Histidine phosphatase superfamily (branch 1) CP439_RS06985 PF13175 AAA ATPase domain CP439_RS06990 PF00732 GMC oxidoreductase CP439_RS06990 PF05199 GMC oxidoreductase CP439_RS06995 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CP439_RS07000 PF00005 ABC transporter CP439_RS07000 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CP439_RS07005 PF12911 N-terminal TM domain of oligopeptide transport permease C CP439_RS07005 PF00528 Binding-protein-dependent transport system inner membrane component CP439_RS07010 PF00528 Binding-protein-dependent transport system inner membrane component CP439_RS07015 PF00484 Carbonic anhydrase CP439_RS07020 PF01507 Phosphoadenosine phosphosulfate reductase family CP439_RS07025 PF00009 Elongation factor Tu GTP binding domain CP439_RS07030 PF02082 Transcriptional regulator CP439_RS07035 PF01476 LysM domain CP439_RS07035 PF00756 Putative esterase CP439_RS07045 PF10011 Predicted membrane protein (DUF2254) CP439_RS07055 PF05305 Protein of unknown function (DUF732) CP439_RS07065 PF03485 Arginyl tRNA synthetase N terminal domain CP439_RS07065 PF05746 DALR anticodon binding domain CP439_RS07065 PF00750 tRNA synthetases class I (R) CP439_RS07070 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CP439_RS07070 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CP439_RS07075 PF03447 Homoserine dehydrogenase, NAD binding domain CP439_RS07075 PF01842 ACT domain CP439_RS07075 PF00742 Homoserine dehydrogenase CP439_RS07080 PF00291 Pyridoxal-phosphate dependent enzyme CP439_RS07090 PF00288 GHMP kinases N terminal domain CP439_RS07100 PF07497 Rho termination factor, RNA-binding domain CP439_RS07100 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CP439_RS07100 PF07498 Rho termination factor, N-terminal domain CP439_RS07110 PF01197 Ribosomal protein L31 CP439_RS07115 PF00472 RF-1 domain CP439_RS07115 PF03462 PCRF domain CP439_RS07120 PF17827 PrmC N-terminal domain CP439_RS07120 PF13649 Methyltransferase domain CP439_RS07125 PF01300 Telomere recombination CP439_RS07130 PF00953 Glycosyl transferase family 4 CP439_RS07135 PF03899 ATP synthase I chain CP439_RS07140 PF00119 ATP synthase A chain CP439_RS07145 PF00137 ATP synthase subunit C CP439_RS07150 PF00430 ATP synthase B/B' CF(0) CP439_RS07155 PF00213 ATP synthase delta (OSCP) subunit CP439_RS07155 PF00430 ATP synthase B/B' CF(0) CP439_RS07160 PF00306 ATP synthase alpha/beta chain, C terminal domain CP439_RS07160 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CP439_RS07160 PF02874 ATP synthase alpha/beta family, beta-barrel domain CP439_RS07165 PF00231 ATP synthase CP439_RS07170 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CP439_RS07170 PF02874 ATP synthase alpha/beta family, beta-barrel domain CP439_RS07175 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CP439_RS07180 PF10739 Protein of unknown function (DUF2550) CP439_RS07185 PF13542 Helix-turn-helix domain of transposase family ISL3 CP439_RS07185 PF01610 Transposase CP439_RS07185 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 CP439_RS07190 PF01923 Cobalamin adenosyltransferase CP439_RS07195 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CP439_RS07215 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CP439_RS07215 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CP439_RS07220 PF02805 Metal binding domain of Ada CP439_RS07220 PF06029 AlkA N-terminal domain CP439_RS07220 PF00730 HhH-GPD superfamily base excision DNA repair protein CP439_RS07220 PF12833 Helix-turn-helix domain CP439_RS07225 PF00211 Adenylate and Guanylate cyclase catalytic domain CP439_RS07225 PF00672 HAMP domain CP439_RS07230 PF00211 Adenylate and Guanylate cyclase catalytic domain CP439_RS07230 PF00672 HAMP domain CP439_RS07235 PF00672 HAMP domain CP439_RS07235 PF00211 Adenylate and Guanylate cyclase catalytic domain CP439_RS07240 PF01939 Endonuclease NucS CP439_RS07255 PF02803 Thiolase, C-terminal domain CP439_RS07255 PF00108 Thiolase, N-terminal domain CP439_RS07260 PF00085 Thioredoxin CP439_RS07265 PF00934 PE family CP439_RS07270 PF02806 Alpha amylase, C-terminal all-beta domain CP439_RS07270 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CP439_RS07270 PF00128 Alpha amylase, catalytic domain CP439_RS07275 PF11896 Domain of unknown function (DUF3416) CP439_RS07275 PF00128 Alpha amylase, catalytic domain CP439_RS07280 PF00343 Carbohydrate phosphorylase CP439_RS07280 PF11897 Protein of unknown function (DUF3417) CP439_RS07285 PF13307 Helicase C-terminal domain CP439_RS07290 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CP439_RS07290 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CP439_RS07295 PF02617 ATP-dependent Clp protease adaptor protein ClpS CP439_RS07300 PF09438 Domain of unknown function (DUF2017) CP439_RS07305 PF03576 Peptidase family S58 CP439_RS07310 PF14464 Prokaryotic homologs of the JAB domain CP439_RS07315 PF02597 ThiS family CP439_RS07320 PF00291 Pyridoxal-phosphate dependent enzyme CP439_RS07325 PF01694 Rhomboid family CP439_RS07330 PF01177 Asp/Glu/Hydantoin racemase CP439_RS07335 PF12706 Beta-lactamase superfamily domain CP439_RS07340 PF03725 3' exoribonuclease family, domain 2 CP439_RS07340 PF01138 3' exoribonuclease family, domain 1 CP439_RS07345 PF01725 Ham1 family CP439_RS07350 PF12823 Domain of unknown function (DUF3817) CP439_RS07360 PF00550 Phosphopantetheine attachment site CP439_RS07365 PF00501 AMP-binding enzyme CP439_RS07370 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CP439_RS07370 PF02770 Acyl-CoA dehydrogenase, middle domain CP439_RS07370 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CP439_RS07385 PF00664 ABC transporter transmembrane region CP439_RS07385 PF08021 Siderophore-interacting FAD-binding domain CP439_RS07385 PF00005 ABC transporter CP439_RS07385 PF04954 Siderophore-interacting protein CP439_RS07390 PF00005 ABC transporter CP439_RS07420 PF02909 Tetracyclin repressor-like, C-terminal domain CP439_RS07420 PF00440 Bacterial regulatory proteins, tetR family CP439_RS07425 PF00563 EAL domain CP439_RS07425 PF00990 Diguanylate cyclase, GGDEF domain CP439_RS07425 PF13185 GAF domain CP439_RS07430 PF00899 ThiF family CP439_RS07440 PF00563 EAL domain CP439_RS07445 PF00196 Bacterial regulatory proteins, luxR family CP439_RS07460 PF00296 Luciferase-like monooxygenase CP439_RS07465 PF00823 PPE family CP439_RS07465 PF12484 Polymorphic PE/PPE proteins C terminal CP439_RS07480 PF13466 STAS domain CP439_RS07480 PF13581 Histidine kinase-like ATPase domain CP439_RS07480 PF08448 PAS fold CP439_RS07480 PF07228 Stage II sporulation protein E (SpoIIE) CP439_RS07485 PF01740 STAS domain CP439_RS07490 PF04607 Region found in RelA / SpoT proteins CP439_RS07500 PF00144 Beta-lactamase CP439_RS07505 PF07161 LppX_LprAFG lipoprotein CP439_RS07520 PF00195 Chalcone and stilbene synthases, N-terminal domain CP439_RS07520 PF02797 Chalcone and stilbene synthases, C-terminal domain CP439_RS07525 PF00685 Sulfotransferase domain CP439_RS07535 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding CP439_RS07545 PF13649 Methyltransferase domain CP439_RS07555 PF00156 Phosphoribosyl transferase domain CP439_RS07560 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CP439_RS07560 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CP439_RS07565 PF01979 Amidohydrolase family CP439_RS07575 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CP439_RS07575 PF00117 Glutamine amidotransferase class-I CP439_RS07580 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CP439_RS07580 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CP439_RS07580 PF02142 MGS-like domain CP439_RS07585 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CP439_RS07590 PF00934 PE family CP439_RS07595 PF00823 PPE family CP439_RS07610 PF00625 Guanylate kinase CP439_RS07615 PF01192 RNA polymerase Rpb6 CP439_RS07620 PF04127 DNA / pantothenate metabolism flavoprotein CP439_RS07620 PF02441 Flavoprotein CP439_RS07625 PF02773 S-adenosylmethionine synthetase, C-terminal domain CP439_RS07625 PF00438 S-adenosylmethionine synthetase, N-terminal domain CP439_RS07625 PF02772 S-adenosylmethionine synthetase, central domain CP439_RS07630 PF00743 Flavin-binding monooxygenase-like CP439_RS07635 PF00067 Cytochrome P450 CP439_RS07640 PF12833 Helix-turn-helix domain CP439_RS07640 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term CP439_RS07645 PF00934 PE family CP439_RS07650 PF01850 PIN domain CP439_RS07655 PF01402 Ribbon-helix-helix protein, copG family CP439_RS07660 PF07859 alpha/beta hydrolase fold CP439_RS07665 PF07859 alpha/beta hydrolase fold CP439_RS07670 PF07947 YhhN family CP439_RS07675 PF17764 3′ DNA-binding domain (3′BD) CP439_RS07680 PF13649 Methyltransferase domain CP439_RS07690 PF08241 Methyltransferase domain CP439_RS07695 PF02911 Formyl transferase, C-terminal domain CP439_RS07695 PF00551 Formyl transferase CP439_RS07700 PF01029 NusB family CP439_RS07700 PF01189 16S rRNA methyltransferase RsmB/F CP439_RS07705 PF00834 Ribulose-phosphate 3 epimerase family CP439_RS07710 PF01872 RibD C-terminal domain CP439_RS07710 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CP439_RS07715 PF07690 Major Facilitator Superfamily CP439_RS07720 PF07161 LppX_LprAFG lipoprotein CP439_RS07725 PF00677 Lumazine binding domain CP439_RS07730 PF01168 Alanine racemase, N-terminal domain CP439_RS07735 PF14031 Putative serine dehydratase domain CP439_RS07740 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CP439_RS07740 PF00925 GTP cyclohydrolase II CP439_RS07745 PF00885 6,7-dimethyl-8-ribityllumazine synthase CP439_RS07750 PF10756 Bacterial PH domain CP439_RS07760 PF00652 Ricin-type beta-trefoil lectin domain CP439_RS07765 PF01541 GIY-YIG catalytic domain CP439_RS07765 PF02151 UvrB/uvrC motif CP439_RS07765 PF08459 UvrC Helix-hairpin-helix N-terminal CP439_RS07770 PF03668 P-loop ATPase protein family CP439_RS07775 PF01933 Uncharacterised protein family UPF0052 CP439_RS07780 PF10298 WhiA N-terminal LAGLIDADG-like domain CP439_RS07780 PF02650 WhiA C-terminal HTH domain CP439_RS07780 PF14527 WhiA LAGLIDADG-like domain CP439_RS07790 PF06974 Protein of unknown function (DUF1298) CP439_RS07790 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain CP439_RS07795 PF07859 alpha/beta hydrolase fold CP439_RS07800 PF00501 AMP-binding enzyme CP439_RS07800 PF13193 AMP-binding enzyme C-terminal domain CP439_RS07815 PF08237 PE-PPE domain CP439_RS07815 PF00934 PE family CP439_RS07830 PF03734 L,D-transpeptidase catalytic domain CP439_RS07830 PF17964 Bacterial Ig domain CP439_RS07850 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CP439_RS07850 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CP439_RS07855 PF00162 Phosphoglycerate kinase CP439_RS07860 PF00121 Triosephosphate isomerase CP439_RS07880 PF03840 Preprotein translocase SecG subunit CP439_RS07890 PF00934 PE family CP439_RS07895 PF18364 Molybdopterin oxidoreductase N-terminal domain CP439_RS07895 PF01568 Molydopterin dinucleotide binding domain CP439_RS07895 PF00384 Molybdopterin oxidoreductase CP439_RS07920 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CP439_RS07930 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CP439_RS07930 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CP439_RS07935 PF00923 Transaldolase/Fructose-6-phosphate aldolase CP439_RS07940 PF02780 Transketolase, C-terminal domain CP439_RS07940 PF02779 Transketolase, pyrimidine binding domain CP439_RS07940 PF00456 Transketolase, thiamine diphosphate binding domain CP439_RS07950 PF00934 PE family CP439_RS07955 PF01040 UbiA prenyltransferase family CP439_RS07960 PF00934 PE family CP439_RS07970 PF08240 Alcohol dehydrogenase GroES-like domain CP439_RS07970 PF00107 Zinc-binding dehydrogenase CP439_RS07990 PF00005 ABC transporter CP439_RS08005 PF01458 Uncharacterized protein family (UPF0051) CP439_RS08010 PF01458 Uncharacterized protein family (UPF0051) CP439_RS08015 PF00005 ABC transporter CP439_RS08020 PF00266 Aminotransferase class-V CP439_RS08025 PF01592 NifU-like N terminal domain CP439_RS08030 PF01883 Iron-sulfur cluster assembly protein CP439_RS08035 PF02770 Acyl-CoA dehydrogenase, middle domain CP439_RS08035 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CP439_RS08035 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CP439_RS08040 PF00934 PE family CP439_RS08055 PF00085 Thioredoxin CP439_RS08060 PF00378 Enoyl-CoA hydratase/isomerase CP439_RS08065 PF00005 ABC transporter CP439_RS08065 PF12848 ABC transporter CP439_RS08075 PF00440 Bacterial regulatory proteins, tetR family CP439_RS08080 PF00694 Aconitase C-terminal domain CP439_RS08080 PF00330 Aconitase family (aconitate hydratase) CP439_RS08090 PF00877 NlpC/P60 family CP439_RS08095 PF00877 NlpC/P60 family CP439_RS08100 PF17863 AAA lid domain CP439_RS08100 PF07726 ATPase family associated with various cellular activities (AAA) CP439_RS08105 PF01882 Protein of unknown function DUF58 CP439_RS08110 PF13519 von Willebrand factor type A domain CP439_RS08130 PF00762 Ferrochelatase CP439_RS08145 PF01145 SPFH domain / Band 7 family CP439_RS08155 PF02310 B12 binding domain CP439_RS08155 PF01642 Methylmalonyl-CoA mutase CP439_RS08170 PF09335 SNARE associated Golgi protein CP439_RS08175 PF01642 Methylmalonyl-CoA mutase CP439_RS08180 PF01642 Methylmalonyl-CoA mutase CP439_RS08180 PF02310 B12 binding domain CP439_RS08190 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system CP439_RS08200 PF00144 Beta-lactamase CP439_RS08205 PF08241 Methyltransferase domain CP439_RS08210 PF07311 Dodecin CP439_RS08220 PF00535 Glycosyl transferase family 2 CP439_RS08225 PF05721 Phytanoyl-CoA dioxygenase (PhyH) CP439_RS08245 PF13649 Methyltransferase domain CP439_RS08250 PF08889 WbqC-like protein family CP439_RS08265 PF16363 GDP-mannose 4,6 dehydratase CP439_RS08285 PF16363 GDP-mannose 4,6 dehydratase CP439_RS08290 PF01370 NAD dependent epimerase/dehydratase family CP439_RS08300 PF00535 Glycosyl transferase family 2 CP439_RS08310 PF00535 Glycosyl transferase family 2 CP439_RS08315 PF11139 Sap, sulfolipid-1-addressing protein CP439_RS08320 PF00535 Glycosyl transferase family 2 CP439_RS08325 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CP439_RS08330 PF00535 Glycosyl transferase family 2 CP439_RS08340 PF00501 AMP-binding enzyme CP439_RS08345 PF03176 MMPL family CP439_RS08350 PF08241 Methyltransferase domain CP439_RS08355 PF03033 Glycosyltransferase family 28 N-terminal domain CP439_RS08365 PF03033 Glycosyltransferase family 28 N-terminal domain CP439_RS08370 PF02801 Beta-ketoacyl synthase, C-terminal domain CP439_RS08370 PF00550 Phosphopantetheine attachment site CP439_RS08370 PF08240 Alcohol dehydrogenase GroES-like domain CP439_RS08370 PF00109 Beta-ketoacyl synthase, N-terminal domain CP439_RS08370 PF16197 Ketoacyl-synthetase C-terminal extension CP439_RS08370 PF00698 Acyl transferase domain CP439_RS08370 PF00107 Zinc-binding dehydrogenase CP439_RS08370 PF08659 KR domain CP439_RS08370 PF14765 Polyketide synthase dehydratase CP439_RS08380 PF00501 AMP-binding enzyme CP439_RS08385 PF08240 Alcohol dehydrogenase GroES-like domain CP439_RS08385 PF00107 Zinc-binding dehydrogenase CP439_RS08400 PF03060 Nitronate monooxygenase CP439_RS08405 PF16295 Tetracyclin repressor-like, C-terminal domain CP439_RS08405 PF00440 Bacterial regulatory proteins, tetR family CP439_RS08415 PF00133 tRNA synthetases class I (I, L, M and V) CP439_RS08415 PF08264 Anticodon-binding domain of tRNA CP439_RS08420 PF11798 IMS family HHH motif CP439_RS08420 PF11799 impB/mucB/samB family C-terminal domain CP439_RS08420 PF00817 impB/mucB/samB family CP439_RS08425 PF17763 Glutaminase/Asparaginase C-terminal domain CP439_RS08425 PF00710 Asparaginase, N-terminal CP439_RS08430 PF01252 Signal peptidase (SPase) II CP439_RS08435 PF00849 RNA pseudouridylate synthase CP439_RS08440 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme CP439_RS08440 PF07007 Lysozyme inhibitor LprI CP439_RS08445 PF01152 Bacterial-like globin CP439_RS08450 PF00106 short chain dehydrogenase CP439_RS08455 PF00106 short chain dehydrogenase CP439_RS08465 PF10604 Polyketide cyclase / dehydrase and lipid transport CP439_RS08470 PF07733 Bacterial DNA polymerase III alpha NTPase domain CP439_RS08470 PF14579 Helix-hairpin-helix motif CP439_RS08470 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CP439_RS08470 PF02811 PHP domain CP439_RS08475 PF01469 Pentapeptide repeats (8 copies) CP439_RS08475 PF00823 PPE family CP439_RS08480 PF00501 AMP-binding enzyme CP439_RS08485 PF00501 AMP-binding enzyme CP439_RS08490 PF01553 Acyltransferase CP439_RS08500 PF02910 Fumarate reductase flavoprotein C-term CP439_RS08500 PF00890 FAD binding domain CP439_RS08505 PF13183 4Fe-4S dicluster domain CP439_RS08505 PF13085 2Fe-2S iron-sulfur cluster binding domain CP439_RS08510 PF02313 Fumarate reductase subunit D CP439_RS08515 PF00440 Bacterial regulatory proteins, tetR family CP439_RS08515 PF16859 Tetracyclin repressor-like, C-terminal domain CP439_RS08520 PF03176 MMPL family CP439_RS08525 PF04075 F420H(2)-dependent quinone reductase CP439_RS08530 PF00291 Pyridoxal-phosphate dependent enzyme CP439_RS08530 PF00585 C-terminal regulatory domain of Threonine dehydratase CP439_RS08535 PF09957 Bacterial antitoxin of type II TA system, VapB CP439_RS08540 PF01850 PIN domain CP439_RS08545 PF00128 Alpha amylase, catalytic domain CP439_RS08545 PF11941 Domain of unknown function (DUF3459) CP439_RS08550 PF00128 Alpha amylase, catalytic domain CP439_RS08555 PF00128 Alpha amylase, catalytic domain CP439_RS08555 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CP439_RS08560 PF01757 Acyltransferase family CP439_RS08565 PF00877 NlpC/P60 family CP439_RS08575 PF00202 Aminotransferase class-III CP439_RS08580 PF00155 Aminotransferase class I and II CP439_RS08655 PF10888 Protein of unknown function (DUF2742) CP439_RS08685 PF02720 Domain of unknown function (DUF222) CP439_RS08690 PF04055 Radical SAM superfamily CP439_RS08690 PF06968 Biotin and Thiamin Synthesis associated domain CP439_RS08700 PF10821 Protein of unknown function (DUF2567) CP439_RS08705 PF03583 Secretory lipase CP439_RS08715 PF02445 Quinolinate synthetase A protein CP439_RS08720 PF00890 FAD binding domain CP439_RS08720 PF02910 Fumarate reductase flavoprotein C-term CP439_RS08725 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CP439_RS08725 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CP439_RS08740 PF00815 Histidinol dehydrogenase CP439_RS08745 PF00155 Aminotransferase class I and II CP439_RS08750 PF00475 Imidazoleglycerol-phosphate dehydratase CP439_RS08755 PF00117 Glutamine amidotransferase class-I CP439_RS08760 PF00977 Histidine biosynthesis protein CP439_RS08765 PF00459 Inositol monophosphatase family CP439_RS08770 PF00977 Histidine biosynthesis protein CP439_RS08775 PF01502 Phosphoribosyl-AMP cyclohydrolase CP439_RS08780 PF01699 Sodium/calcium exchanger protein CP439_RS08785 PF00578 AhpC/TSA family CP439_RS08790 PF00425 chorismate binding enzyme CP439_RS08790 PF04715 Anthranilate synthase component I, N terminal region CP439_RS08800 PF00218 Indole-3-glycerol phosphate synthase CP439_RS08805 PF00291 Pyridoxal-phosphate dependent enzyme CP439_RS08810 PF00290 Tryptophan synthase alpha chain CP439_RS08815 PF01790 Prolipoprotein diacylglyceryl transferase CP439_RS08835 PF02887 Pyruvate kinase, alpha/beta domain CP439_RS08835 PF00224 Pyruvate kinase, barrel domain CP439_RS08845 PF00583 Acetyltransferase (GNAT) family CP439_RS08850 PF00005 ABC transporter CP439_RS08855 PF00005 ABC transporter CP439_RS08855 PF00664 ABC transporter transmembrane region CP439_RS08860 PF02322 Cytochrome bd terminal oxidase subunit II CP439_RS08865 PF01654 Cytochrome bd terminal oxidase subunit I CP439_RS08875 PF00211 Adenylate and Guanylate cyclase catalytic domain CP439_RS08885 PF03861 ANTAR domain CP439_RS08885 PF00072 Response regulator receiver domain CP439_RS08900 PF01367 5'-3' exonuclease, C-terminal SAM fold CP439_RS08900 PF00476 DNA polymerase family A CP439_RS08900 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CP439_RS08905 PF00575 S1 RNA binding domain CP439_RS08910 PF04229 GrpB protein CP439_RS08910 PF01121 Dephospho-CoA kinase CP439_RS08925 PF04851 Type III restriction enzyme, res subunit CP439_RS08925 PF00271 Helicase conserved C-terminal domain CP439_RS08925 PF02151 UvrB/uvrC motif CP439_RS08925 PF12344 Ultra-violet resistance protein B CP439_RS08925 PF17757 UvrB interaction domain CP439_RS08930 PF07690 Major Facilitator Superfamily CP439_RS08945 PF00582 Universal stress protein family CP439_RS08950 PF00753 Metallo-beta-lactamase superfamily CP439_RS08955 PF17755 UvrA DNA-binding domain CP439_RS08955 PF17760 UvrA interaction domain CP439_RS08955 PF00005 ABC transporter CP439_RS08970 PF16995 Transmembrane region of lysyl-tRNA synthetase CP439_RS08970 PF01336 OB-fold nucleic acid binding domain CP439_RS08970 PF09924 Uncharacterised conserved protein (DUF2156) CP439_RS08970 PF00152 tRNA synthetases class II (D, K and N) CP439_RS08975 PF00707 Translation initiation factor IF-3, C-terminal domain CP439_RS08975 PF05198 Translation initiation factor IF-3, N-terminal domain CP439_RS08980 PF01632 Ribosomal protein L35 CP439_RS08985 PF00453 Ribosomal protein L20 CP439_RS08990 PF00588 SpoU rRNA Methylase family CP439_RS09000 PF00934 PE family CP439_RS09015 PF01409 tRNA synthetases class II core domain (F) CP439_RS09015 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CP439_RS09020 PF03484 tRNA synthetase B5 domain CP439_RS09020 PF01588 Putative tRNA binding domain CP439_RS09020 PF03483 B3/4 domain CP439_RS09020 PF03147 Ferredoxin-fold anticodon binding domain CP439_RS09020 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CP439_RS09025 PF00934 PE family CP439_RS09030 PF01118 Semialdehyde dehydrogenase, NAD binding domain CP439_RS09030 PF02774 Semialdehyde dehydrogenase, dimerisation domain CP439_RS09035 PF01960 ArgJ family CP439_RS09040 PF00696 Amino acid kinase family CP439_RS09045 PF00202 Aminotransferase class-III CP439_RS09050 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CP439_RS09050 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CP439_RS09055 PF01316 Arginine repressor, DNA binding domain CP439_RS09055 PF02863 Arginine repressor, C-terminal domain CP439_RS09060 PF00764 Arginosuccinate synthase CP439_RS09065 PF00206 Lyase CP439_RS09065 PF14698 Argininosuccinate lyase C-terminal CP439_RS09070 PF02797 Chalcone and stilbene synthases, C-terminal domain CP439_RS09070 PF00195 Chalcone and stilbene synthases, N-terminal domain CP439_RS09075 PF00698 Acyl transferase domain CP439_RS09075 PF08240 Alcohol dehydrogenase GroES-like domain CP439_RS09075 PF16197 Ketoacyl-synthetase C-terminal extension CP439_RS09075 PF00109 Beta-ketoacyl synthase, N-terminal domain CP439_RS09075 PF02801 Beta-ketoacyl synthase, C-terminal domain CP439_RS09075 PF08659 KR domain CP439_RS09075 PF00550 Phosphopantetheine attachment site CP439_RS09075 PF14765 Polyketide synthase dehydratase CP439_RS09080 PF00109 Beta-ketoacyl synthase, N-terminal domain CP439_RS09080 PF16197 Ketoacyl-synthetase C-terminal extension CP439_RS09080 PF14765 Polyketide synthase dehydratase CP439_RS09080 PF08240 Alcohol dehydrogenase GroES-like domain CP439_RS09080 PF00550 Phosphopantetheine attachment site CP439_RS09080 PF02801 Beta-ketoacyl synthase, C-terminal domain CP439_RS09080 PF00698 Acyl transferase domain CP439_RS09080 PF08659 KR domain CP439_RS09085 PF00698 Acyl transferase domain CP439_RS09085 PF08240 Alcohol dehydrogenase GroES-like domain CP439_RS09085 PF14765 Polyketide synthase dehydratase CP439_RS09085 PF08659 KR domain CP439_RS09085 PF00550 Phosphopantetheine attachment site CP439_RS09090 PF08659 KR domain CP439_RS09090 PF00698 Acyl transferase domain CP439_RS09090 PF02801 Beta-ketoacyl synthase, C-terminal domain CP439_RS09090 PF00550 Phosphopantetheine attachment site CP439_RS09090 PF14765 Polyketide synthase dehydratase CP439_RS09090 PF16197 Ketoacyl-synthetase C-terminal extension CP439_RS09090 PF02801 Beta-ketoacyl synthase, C-terminal domain CP439_RS09090 PF08240 Alcohol dehydrogenase GroES-like domain CP439_RS09090 PF16197 Ketoacyl-synthetase C-terminal extension CP439_RS09090 PF00109 Beta-ketoacyl synthase, N-terminal domain CP439_RS09090 PF08240 Alcohol dehydrogenase GroES-like domain CP439_RS09090 PF08659 KR domain CP439_RS09090 PF00109 Beta-ketoacyl synthase, N-terminal domain CP439_RS09090 PF14765 Polyketide synthase dehydratase CP439_RS09090 PF00698 Acyl transferase domain CP439_RS09090 PF00550 Phosphopantetheine attachment site CP439_RS09095 PF00195 Chalcone and stilbene synthases, N-terminal domain CP439_RS09095 PF02797 Chalcone and stilbene synthases, C-terminal domain CP439_RS09100 PF00067 Cytochrome P450 CP439_RS09105 PF16326 ABC transporter C-terminal domain CP439_RS09105 PF00005 ABC transporter CP439_RS09105 PF12848 ABC transporter CP439_RS09125 PF07690 Major Facilitator Superfamily CP439_RS09135 PF00581 Rhodanese-like domain CP439_RS09140 PF00027 Cyclic nucleotide-binding domain CP439_RS09140 PF13545 Crp-like helix-turn-helix domain CP439_RS09150 PF00578 AhpC/TSA family CP439_RS09160 PF02770 Acyl-CoA dehydrogenase, middle domain CP439_RS09160 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CP439_RS09160 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CP439_RS09185 PF03966 Trm112p-like protein CP439_RS09200 PF00005 ABC transporter CP439_RS09205 PF02245 Methylpurine-DNA glycosylase (MPG) CP439_RS09210 PF00579 tRNA synthetases class I (W and Y) CP439_RS09215 PF05305 Protein of unknown function (DUF732) CP439_RS09225 PF18407 GCN5-related N-acetyltransferase like domain CP439_RS09225 PF13344 Haloacid dehalogenase-like hydrolase CP439_RS09235 PF01728 FtsJ-like methyltransferase CP439_RS09235 PF01479 S4 domain CP439_RS09240 PF01513 ATP-NAD kinase CP439_RS09245 PF02463 RecF/RecN/SMC N terminal domain CP439_RS09255 PF11382 Copper transport outer membrane protein, MctB CP439_RS09260 PF00117 Glutamine amidotransferase class-I CP439_RS09260 PF06418 CTP synthase N-terminus CP439_RS09265 PF00293 NUDIX domain CP439_RS09270 PF02899 Phage integrase, N-terminal SAM-like domain CP439_RS09270 PF00589 Phage integrase family CP439_RS09275 PF02720 Domain of unknown function (DUF222) CP439_RS09280 PF01596 O-methyltransferase CP439_RS09285 PF00324 Amino acid permease CP439_RS09290 PF00823 PPE family CP439_RS09290 PF12484 Polymorphic PE/PPE proteins C terminal CP439_RS09295 PF00823 PPE family CP439_RS09295 PF12484 Polymorphic PE/PPE proteins C terminal CP439_RS09305 PF00916 Sulfate permease family CP439_RS09305 PF01740 STAS domain CP439_RS09310 PF13614 AAA domain CP439_RS09315 PF02616 Segregation and condensation protein ScpA CP439_RS09320 PF04079 Segregation and condensation complex subunit ScpB CP439_RS09325 PF01479 S4 domain CP439_RS09325 PF00849 RNA pseudouridylate synthase CP439_RS09330 PF02224 Cytidylate kinase CP439_RS09335 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CP439_RS09335 PF01926 50S ribosome-binding GTPase CP439_RS09345 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CP439_RS09345 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CP439_RS09360 PF05853 beta-keto acid cleavage enzyme CP439_RS09365 PF09339 IclR helix-turn-helix domain CP439_RS09365 PF01614 Bacterial transcriptional regulator CP439_RS09375 PF01850 PIN domain CP439_RS09400 PF01638 HxlR-like helix-turn-helix CP439_RS09420 PF04072 Leucine carboxyl methyltransferase CP439_RS09425 PF00144 Beta-lactamase CP439_RS09430 PF00171 Aldehyde dehydrogenase family CP439_RS09445 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CP439_RS09455 PF03595 Voltage-dependent anion channel CP439_RS09465 PF02613 Nitrate reductase delta subunit CP439_RS09465 PF02665 Nitrate reductase gamma subunit CP439_RS09465 PF00384 Molybdopterin oxidoreductase CP439_RS09470 PF07690 Major Facilitator Superfamily CP439_RS09475 PF08962 Domain of unknown function (DUF1876) CP439_RS09480 PF01740 STAS domain CP439_RS09480 PF00916 Sulfate permease family CP439_RS09485 PF07704 Rv0623-like transcription factor CP439_RS09500 PF13462 Thioredoxin CP439_RS09500 PF00069 Protein kinase domain CP439_RS09510 PF00293 NUDIX domain CP439_RS09515 PF00069 Protein kinase domain CP439_RS09520 PF00498 FHA domain CP439_RS09520 PF00005 ABC transporter CP439_RS09520 PF01061 ABC-2 type transporter CP439_RS09535 PF00501 AMP-binding enzyme CP439_RS09535 PF13193 AMP-binding enzyme C-terminal domain CP439_RS09540 PF01494 FAD binding domain CP439_RS09550 PF00823 PPE family CP439_RS09550 PF01469 Pentapeptide repeats (8 copies) CP439_RS09560 PF04185 Phosphoesterase family CP439_RS09570 PF01083 Cutinase CP439_RS09575 PF00934 PE family CP439_RS09580 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain CP439_RS09580 PF06974 Protein of unknown function (DUF1298) CP439_RS09605 PF13276 HTH-like domain CP439_RS09605 PF00665 Integrase core domain CP439_RS09620 PF02583 Metal-sensitive transcriptional repressor CP439_RS09625 PF02627 Carboxymuconolactone decarboxylase family CP439_RS09630 PF00934 PE family CP439_RS09645 PF04030 D-arabinono-1,4-lactone oxidase CP439_RS09645 PF01565 FAD binding domain CP439_RS09670 PF00440 Bacterial regulatory proteins, tetR family CP439_RS09675 PF00067 Cytochrome P450 CP439_RS09695 PF02446 4-alpha-glucanotransferase CP439_RS09700 PF05108 Type VII secretion system ESX-1, transport TM domain B CP439_RS09705 PF01580 FtsK/SpoIIIE family CP439_RS09710 PF00067 Cytochrome P450 CP439_RS09720 PF12484 Polymorphic PE/PPE proteins C terminal CP439_RS09720 PF00823 PPE family CP439_RS09725 PF00934 PE family CP439_RS09730 PF12484 Polymorphic PE/PPE proteins C terminal CP439_RS09730 PF00823 PPE family CP439_RS09740 PF12484 Polymorphic PE/PPE proteins C terminal CP439_RS09740 PF00823 PPE family CP439_RS09745 PF00934 PE family CP439_RS09755 PF06013 Proteins of 100 residues with WXG CP439_RS09760 PF14011 EspG family CP439_RS09765 PF08817 WXG100 protein secretion system (Wss), protein YukD CP439_RS09770 PF00082 Subtilase family CP439_RS09775 PF11203 Putative type VII ESX secretion system translocon, EccE CP439_RS09780 PF17866 AAA lid domain CP439_RS09780 PF00004 ATPase family associated with various cellular activities (AAA) CP439_RS09790 PF08237 PE-PPE domain CP439_RS09790 PF00823 PPE family CP439_RS09800 PF00823 PPE family CP439_RS09800 PF12484 Polymorphic PE/PPE proteins C terminal CP439_RS09805 PF12484 Polymorphic PE/PPE proteins C terminal CP439_RS09805 PF00823 PPE family CP439_RS09810 PF00934 PE family CP439_RS09825 PF00934 PE family CP439_RS09830 PF12484 Polymorphic PE/PPE proteins C terminal CP439_RS09830 PF00823 PPE family CP439_RS09835 PF12484 Polymorphic PE/PPE proteins C terminal CP439_RS09835 PF00823 PPE family CP439_RS09840 PF00823 PPE family CP439_RS09840 PF12484 Polymorphic PE/PPE proteins C terminal CP439_RS09850 PF02308 MgtC family CP439_RS09855 PF07992 Pyridine nucleotide-disulphide oxidoreductase CP439_RS09860 PF13827 Domain of unknown function (DUF4189) CP439_RS09865 PF04116 Fatty acid hydroxylase superfamily CP439_RS09875 PF00440 Bacterial regulatory proteins, tetR family CP439_RS09875 PF13305 Tetracyclin repressor-like, C-terminal domain CP439_RS09890 PF00934 PE family CP439_RS09895 PF00005 ABC transporter CP439_RS09895 PF06472 ABC transporter transmembrane region 2 CP439_RS09900 PF00205 Thiamine pyrophosphate enzyme, central domain CP439_RS09900 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CP439_RS09900 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CP439_RS09905 PF07517 SecA DEAD-like domain CP439_RS09905 PF07516 SecA Wing and Scaffold domain CP439_RS09905 PF01043 SecA preprotein cross-linking domain CP439_RS09910 PF01066 CDP-alcohol phosphatidyltransferase CP439_RS09915 PF05949 Bacterial protein of unknown function (DUF881) CP439_RS09920 PF06947 Protein of unknown function (DUF1290) CP439_RS09925 PF05949 Bacterial protein of unknown function (DUF881) CP439_RS09930 PF01597 Glycine cleavage H-protein CP439_RS09935 PF00498 FHA domain CP439_RS09940 PF00376 MerR family regulatory protein CP439_RS09945 PF02577 Bifunctional nuclease CP439_RS09950 PF13411 MerR HTH family regulatory protein CP439_RS09955 PF02347 Glycine cleavage system P-protein CP439_RS09960 PF00561 alpha/beta hydrolase fold CP439_RS09965 PF12697 Alpha/beta hydrolase family CP439_RS09970 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CP439_RS09970 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CP439_RS09985 PF01274 Malate synthase CP439_RS09990 PF01850 PIN domain CP439_RS10000 PF00934 PE family CP439_RS10005 PF01595 Cyclin M transmembrane N-terminal domain CP439_RS10005 PF00571 CBS domain CP439_RS10010 PF03471 Transporter associated domain CP439_RS10010 PF00571 CBS domain CP439_RS10010 PF01595 Cyclin M transmembrane N-terminal domain CP439_RS10015 PF00478 IMP dehydrogenase / GMP reductase domain CP439_RS10015 PF00571 CBS domain CP439_RS10020 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CP439_RS10020 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CP439_RS10030 PF03965 Penicillinase repressor CP439_RS10035 PF03061 Thioesterase superfamily CP439_RS10040 PF00547 Urease, gamma subunit CP439_RS10045 PF00699 Urease beta subunit CP439_RS10050 PF01979 Amidohydrolase family CP439_RS10050 PF00449 Urease alpha-subunit, N-terminal domain CP439_RS10055 PF01730 UreF CP439_RS10060 PF02492 CobW/HypB/UreG, nucleotide-binding domain CP439_RS10075 PF00296 Luciferase-like monooxygenase CP439_RS10090 PF00528 Binding-protein-dependent transport system inner membrane component CP439_RS10095 PF00005 ABC transporter CP439_RS10095 PF03459 TOBE domain CP439_RS10100 PF07174 Fibronectin-attachment protein (FAP) CP439_RS10110 PF08240 Alcohol dehydrogenase GroES-like domain CP439_RS10125 PF00106 short chain dehydrogenase CP439_RS10130 PF02515 CoA-transferase family III CP439_RS10140 PF02803 Thiolase, C-terminal domain CP439_RS10140 PF00108 Thiolase, N-terminal domain CP439_RS10150 PF14759 Reductase C-terminal CP439_RS10150 PF07992 Pyridine nucleotide-disulphide oxidoreductase CP439_RS10160 PF04075 F420H(2)-dependent quinone reductase CP439_RS10165 PF01070 FMN-dependent dehydrogenase CP439_RS10195 PF00210 Ferritin-like domain CP439_RS10200 PF07690 Major Facilitator Superfamily CP439_RS10205 PF03951 Glutamine synthetase, beta-Grasp domain CP439_RS10205 PF00120 Glutamine synthetase, catalytic domain CP439_RS10215 PF00067 Cytochrome P450 CP439_RS10220 PF05481 Mycobacterium 19 kDa lipoprotein antigen CP439_RS10225 PF00106 short chain dehydrogenase CP439_RS10235 PF06737 Transglycosylase-like domain CP439_RS10240 PF01817 Chorismate mutase type II CP439_RS10245 PF00756 Putative esterase CP439_RS10270 PF04072 Leucine carboxyl methyltransferase CP439_RS10275 PF04072 Leucine carboxyl methyltransferase CP439_RS10300 PF03060 Nitronate monooxygenase CP439_RS10315 PF04072 Leucine carboxyl methyltransferase CP439_RS10320 PF02580 D-Tyr-tRNA(Tyr) deacylase CP439_RS10325 PF01910 Thiamine-binding protein CP439_RS10330 PF01661 Macro domain CP439_RS10335 PF00211 Adenylate and Guanylate cyclase catalytic domain CP439_RS10335 PF00072 Response regulator receiver domain CP439_RS10340 PF00994 Probable molybdopterin binding domain CP439_RS10340 PF02464 Competence-damaged protein CP439_RS10345 PF07690 Major Facilitator Superfamily CP439_RS10350 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV CP439_RS10355 PF01740 STAS domain CP439_RS10360 PF01266 FAD dependent oxidoreductase CP439_RS10375 PF00141 Peroxidase CP439_RS10380 PF01475 Ferric uptake regulator family CP439_RS10385 PF01161 Phosphatidylethanolamine-binding protein CP439_RS10390 PF01161 Phosphatidylethanolamine-binding protein CP439_RS10395 PF08990 Erythronolide synthase docking CP439_RS10395 PF00109 Beta-ketoacyl synthase, N-terminal domain CP439_RS10395 PF14765 Polyketide synthase dehydratase CP439_RS10395 PF00550 Phosphopantetheine attachment site CP439_RS10395 PF08240 Alcohol dehydrogenase GroES-like domain CP439_RS10395 PF02801 Beta-ketoacyl synthase, C-terminal domain CP439_RS10395 PF00698 Acyl transferase domain CP439_RS10395 PF08659 KR domain CP439_RS10395 PF16197 Ketoacyl-synthetase C-terminal extension CP439_RS10410 PF00463 Isocitrate lyase family CP439_RS10415 PF00463 Isocitrate lyase family CP439_RS10420 PF01469 Pentapeptide repeats (8 copies) CP439_RS10420 PF00823 PPE family CP439_RS10430 PF00823 PPE family CP439_RS10430 PF01469 Pentapeptide repeats (8 copies) CP439_RS10450 PF00144 Beta-lactamase CP439_RS10450 PF11954 Domain of unknown function (DUF3471) CP439_RS10455 PF00144 Beta-lactamase CP439_RS10465 PF00501 AMP-binding enzyme CP439_RS10470 PF09167 Domain of unknown function (DUF1942) CP439_RS10495 PF01965 DJ-1/PfpI family CP439_RS10495 PF12833 Helix-turn-helix domain CP439_RS10500 PF08534 Redoxin CP439_RS10505 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CP439_RS10505 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CP439_RS10505 PF02770 Acyl-CoA dehydrogenase, middle domain CP439_RS10510 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CP439_RS10510 PF02770 Acyl-CoA dehydrogenase, middle domain CP439_RS10510 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CP439_RS10515 PF00378 Enoyl-CoA hydratase/isomerase CP439_RS10525 PF00296 Luciferase-like monooxygenase CP439_RS10530 PF00970 Oxidoreductase FAD-binding domain CP439_RS10530 PF00111 2Fe-2S iron-sulfur cluster binding domain CP439_RS10530 PF00175 Oxidoreductase NAD-binding domain CP439_RS10535 PF00561 alpha/beta hydrolase fold CP439_RS10540 PF01613 Flavin reductase like domain CP439_RS10545 PF00925 GTP cyclohydrolase II CP439_RS10545 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CP439_RS10555 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system CP439_RS10565 PF02810 SEC-C motif CP439_RS10565 PF07516 SecA Wing and Scaffold domain CP439_RS10565 PF01043 SecA preprotein cross-linking domain CP439_RS10565 PF07517 SecA DEAD-like domain CP439_RS10570 PF02720 Domain of unknown function (DUF222) CP439_RS10570 PF01844 HNH endonuclease CP439_RS10625 PF05973 Phage derived protein Gp49-like (DUF891) CP439_RS10630 PF01381 Helix-turn-helix CP439_RS10645 PF05016 ParE toxin of type II toxin-antitoxin system, parDE CP439_RS10650 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH CP439_RS10660 PF01850 PIN domain CP439_RS10670 PF00440 Bacterial regulatory proteins, tetR family CP439_RS10715 PF02470 MlaD protein CP439_RS10760 PF13520 Amino acid permease CP439_RS10765 PF11738 Protein of unknown function (DUF3298) CP439_RS10770 PF00268 Ribonucleotide reductase, small chain CP439_RS10775 PF01850 PIN domain CP439_RS10780 PF07704 Rv0623-like transcription factor CP439_RS10785 PF00934 PE family CP439_RS10790 PF01083 Cutinase CP439_RS10795 PF02594 Uncharacterised ACR, YggU family COG1872 CP439_RS10800 PF03466 LysR substrate binding domain CP439_RS10800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CP439_RS10805 PF01810 LysE type translocator CP439_RS10810 PF00553 Cellulose binding domain CP439_RS10815 PF00398 Ribosomal RNA adenine dimethylase CP439_RS10825 PF08808 RES domain CP439_RS10830 PF09722 Protein of unknown function (DUF2384) CP439_RS10845 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system CP439_RS10850 PF01402 Ribbon-helix-helix protein, copG family CP439_RS10860 PF07371 Protein of unknown function (DUF1490) CP439_RS10865 PF01022 Bacterial regulatory protein, arsR family CP439_RS10870 PF01814 Hemerythrin HHE cation binding domain CP439_RS10875 PF00582 Universal stress protein family CP439_RS10880 PF00690 Cation transporter/ATPase, N-terminus CP439_RS10880 PF00689 Cation transporting ATPase, C-terminus CP439_RS10890 PF13520 Amino acid permease CP439_RS10900 PF01643 Acyl-ACP thioesterase CP439_RS10910 PF08241 Methyltransferase domain CP439_RS10920 PF00582 Universal stress protein family CP439_RS10925 PF03633 Glycosyl hydrolase family 65, C-terminal domain CP439_RS10925 PF03632 Glycosyl hydrolase family 65 central catalytic domain CP439_RS10925 PF03636 Glycosyl hydrolase family 65, N-terminal domain CP439_RS10925 PF02358 Trehalose-phosphatase CP439_RS10930 PF00037 4Fe-4S binding domain CP439_RS10935 PF13173 AAA domain CP439_RS10935 PF13635 Domain of unknown function (DUF4143) CP439_RS10940 PF09957 Bacterial antitoxin of type II TA system, VapB CP439_RS10945 PF01850 PIN domain CP439_RS10950 PF12802 MarR family CP439_RS10955 PF07166 Protein of unknown function (DUF1398) CP439_RS11005 PF04255 Protein of unknown function (DUF433) CP439_RS11010 PF18478 PIN like domain CP439_RS11020 PF13744 Helix-turn-helix domain CP439_RS11025 PF05973 Phage derived protein Gp49-like (DUF891) CP439_RS11040 PF08463 EcoEI R protein C-terminal CP439_RS11040 PF04851 Type III restriction enzyme, res subunit CP439_RS11040 PF00271 Helicase conserved C-terminal domain CP439_RS11040 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) CP439_RS11045 PF16916 Dimerisation domain of Zinc Transporter CP439_RS11045 PF01545 Cation efflux family CP439_RS11050 PF00582 Universal stress protein family CP439_RS11055 PF07730 Histidine kinase CP439_RS11055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CP439_RS11055 PF13185 GAF domain CP439_RS11055 PF13492 GAF domain CP439_RS11060 PF00582 Universal stress protein family CP439_RS11065 PF00294 pfkB family carbohydrate kinase CP439_RS11070 PF00156 Phosphoribosyl transferase domain CP439_RS11070 PF05139 Erythromycin esterase CP439_RS11075 PF00011 Hsp20/alpha crystallin family CP439_RS11090 PF01022 Bacterial regulatory protein, arsR family CP439_RS11105 PF01734 Patatin-like phospholipase CP439_RS11110 PF17912 MalK OB fold domain CP439_RS11110 PF00005 ABC transporter CP439_RS11115 PF00528 Binding-protein-dependent transport system inner membrane component CP439_RS11120 PF00528 Binding-protein-dependent transport system inner membrane component CP439_RS11125 PF01547 Bacterial extracellular solute-binding protein CP439_RS11135 PF00857 Isochorismatase family CP439_RS11145 PF00135 Carboxylesterase family CP439_RS11155 PF01370 NAD dependent epimerase/dehydratase family CP439_RS11155 PF00391 PEP-utilising enzyme, mobile domain CP439_RS11160 PF02801 Beta-ketoacyl synthase, C-terminal domain CP439_RS11160 PF00109 Beta-ketoacyl synthase, N-terminal domain CP439_RS11160 PF16197 Ketoacyl-synthetase C-terminal extension CP439_RS11160 PF00698 Acyl transferase domain CP439_RS11160 PF08240 Alcohol dehydrogenase GroES-like domain CP439_RS11160 PF14765 Polyketide synthase dehydratase CP439_RS11160 PF08659 KR domain CP439_RS11160 PF00550 Phosphopantetheine attachment site CP439_RS11170 PF13397 RNA polymerase-binding protein CP439_RS11175 PF00795 Carbon-nitrogen hydrolase CP439_RS11175 PF00535 Glycosyl transferase family 2 CP439_RS11180 PF07969 Amidohydrolase family CP439_RS11190 PF01738 Dienelactone hydrolase family CP439_RS11195 PF01084 Ribosomal protein S18 CP439_RS11200 PF00253 Ribosomal protein S14p/S29e CP439_RS11205 PF00471 Ribosomal protein L33 CP439_RS11210 PF00830 Ribosomal L28 family CP439_RS11230 PF02514 CobN/Magnesium Chelatase CP439_RS11240 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system CP439_RS11245 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CP439_RS11250 PF02570 Precorrin-8X methylmutase CP439_RS11255 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CP439_RS11260 PF13847 Methyltransferase domain CP439_RS11270 PF08281 Sigma-70, region 4 CP439_RS11270 PF04542 Sigma-70 region 2 CP439_RS11275 PF02571 Precorrin-6x reductase CbiJ/CobK CP439_RS11280 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CP439_RS11285 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CP439_RS11290 PF00106 short chain dehydrogenase CP439_RS11295 PF01243 Pyridoxamine 5'-phosphate oxidase CP439_RS11320 PF10817 Protein of unknown function (DUF2563) CP439_RS11325 PF06259 Alpha/beta hydrolase CP439_RS11345 PF18646 Family of unknown function (DUF5632) CP439_RS11345 PF18645 Family of unknown function (DUF5631) CP439_RS11360 PF13276 HTH-like domain CP439_RS11365 PF14032 PknH-like extracellular domain CP439_RS11365 PF00069 Protein kinase domain CP439_RS11370 PF01321 Creatinase/Prolidase N-terminal domain CP439_RS11370 PF00557 Metallopeptidase family M24 CP439_RS11375 PF01367 5'-3' exonuclease, C-terminal SAM fold CP439_RS11375 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CP439_RS11380 PF14230 Domain of unknown function (DUF4333) CP439_RS11385 PF00271 Helicase conserved C-terminal domain CP439_RS11385 PF08148 DSHCT (NUC185) domain CP439_RS11385 PF00270 DEAD/DEAH box helicase CP439_RS11390 PF00902 Sec-independent protein translocase protein (TatC) CP439_RS11395 PF02416 mttA/Hcf106 family CP439_RS11400 PF13280 WYL domain CP439_RS11405 PF13280 WYL domain CP439_RS11410 PF03136 Pup-ligase protein CP439_RS11420 PF02720 Domain of unknown function (DUF222) CP439_RS11425 PF00271 Helicase conserved C-terminal domain CP439_RS11425 PF12419 SNF2 Helicase protein CP439_RS11425 PF00176 SNF2 family N-terminal domain CP439_RS11430 PF04434 SWIM zinc finger CP439_RS11435 PF01850 PIN domain CP439_RS11445 PF00227 Proteasome subunit CP439_RS11465 PF00823 PPE family CP439_RS11470 PF00227 Proteasome subunit CP439_RS11475 PF00227 Proteasome subunit CP439_RS11480 PF05639 Pup-like protein CP439_RS11485 PF03136 Pup-ligase protein CP439_RS11500 PF00004 ATPase family associated with various cellular activities (AAA) CP439_RS11500 PF16450 Proteasomal ATPase OB C-terminal domain CP439_RS11500 PF17758 Proteasomal ATPase OB N-terminal domain CP439_RS11515 PF08704 tRNA methyltransferase complex GCD14 subunit CP439_RS11530 PF08029 HisG, C-terminal domain CP439_RS11530 PF01634 ATP phosphoribosyltransferase CP439_RS11535 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CP439_RS11540 PF00823 PPE family CP439_RS11545 PF00809 Pterin binding enzyme CP439_RS11545 PF02965 Vitamin B12 dependent methionine synthase, activation domain CP439_RS11545 PF02607 B12 binding domain CP439_RS11545 PF02310 B12 binding domain CP439_RS11545 PF02574 Homocysteine S-methyltransferase CP439_RS11560 PF00324 Amino acid permease CP439_RS11575 PF01406 tRNA synthetases class I (C) catalytic domain CP439_RS11580 PF00459 Inositol monophosphatase family CP439_RS11605 PF02673 Bacitracin resistance protein BacA CP439_RS11625 PF01180 Dihydroorotate dehydrogenase CP439_RS11630 PF01161 Phosphatidylethanolamine-binding protein CP439_RS11635 PF01546 Peptidase family M20/M25/M40 CP439_RS11635 PF07687 Peptidase dimerisation domain CP439_RS11645 PF05016 ParE toxin of type II toxin-antitoxin system, parDE CP439_RS11655 PF00156 Phosphoribosyl transferase domain CP439_RS11655 PF05139 Erythromycin esterase CP439_RS11665 PF05103 DivIVA protein CP439_RS11675 PF04472 Cell division protein SepF CP439_RS11680 PF01168 Alanine racemase, N-terminal domain CP439_RS11685 PF02578 Multi-copper polyphenol oxidoreductase laccase CP439_RS11690 PF00091 Tubulin/FtsZ family, GTPase domain CP439_RS11690 PF12327 FtsZ family, C-terminal domain CP439_RS11695 PF03799 Cell division protein FtsQ CP439_RS11695 PF08478 POTRA domain, FtsQ-type CP439_RS11700 PF08245 Mur ligase middle domain CP439_RS11700 PF02875 Mur ligase family, glutamate ligase domain CP439_RS11700 PF01225 Mur ligase family, catalytic domain CP439_RS11705 PF04101 Glycosyltransferase family 28 C-terminal domain CP439_RS11705 PF03033 Glycosyltransferase family 28 N-terminal domain CP439_RS11710 PF01098 Cell cycle protein CP439_RS11715 PF08245 Mur ligase middle domain CP439_RS11715 PF02875 Mur ligase family, glutamate ligase domain CP439_RS11720 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CP439_RS11720 PF00953 Glycosyl transferase family 4 CP439_RS11725 PF02875 Mur ligase family, glutamate ligase domain CP439_RS11725 PF08245 Mur ligase middle domain CP439_RS11725 PF01225 Mur ligase family, catalytic domain CP439_RS11730 PF01225 Mur ligase family, catalytic domain CP439_RS11730 PF08245 Mur ligase middle domain CP439_RS11730 PF02875 Mur ligase family, glutamate ligase domain CP439_RS11745 PF00296 Luciferase-like monooxygenase CP439_RS11750 PF00934 PE family CP439_RS11755 PF00905 Penicillin binding protein transpeptidase domain CP439_RS11755 PF03717 Penicillin-binding Protein dimerisation domain CP439_RS11765 PF01795 MraW methylase family CP439_RS11770 PF02381 MraZ protein, putative antitoxin-like CP439_RS11805 PF00348 Polyprenyl synthetase CP439_RS11815 PF18367 Rv2175c C-terminal domain of unknown function CP439_RS11820 PF00069 Protein kinase domain CP439_RS11835 PF01474 Class-II DAHP synthetase family CP439_RS11840 PF16473 3' exoribonuclease, RNase T-like CP439_RS11850 PF09594 Glycosyltransferase family 87 CP439_RS11865 PF02374 Anion-transporting ATPase CP439_RS11880 PF00501 AMP-binding enzyme CP439_RS11885 PF00534 Glycosyl transferases group 1 CP439_RS11885 PF13439 Glycosyltransferase Family 4 CP439_RS11895 PF00877 NlpC/P60 family CP439_RS11905 PF00929 Exonuclease CP439_RS11905 PF01541 GIY-YIG catalytic domain CP439_RS11910 PF00591 Glycosyl transferase family, a/b domain CP439_RS11910 PF02885 Glycosyl transferase family, helical bundle domain CP439_RS11915 PF00510 Cytochrome c oxidase subunit III CP439_RS11920 PF00034 Cytochrome c CP439_RS11920 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CP439_RS11925 PF00355 Rieske [2Fe-2S] domain CP439_RS11930 PF13631 Cytochrome b(N-terminal)/b6/petB CP439_RS11935 PF10812 Protein of unknown function (DUF2561) CP439_RS11940 PF05423 Mycobacterium membrane protein CP439_RS11945 PF12270 Cytochrome c oxidase subunit IV CP439_RS11950 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CP439_RS11955 PF13537 Glutamine amidotransferase domain CP439_RS11955 PF00733 Asparagine synthase CP439_RS11960 PF00294 pfkB family carbohydrate kinase CP439_RS11970 PF01521 Iron-sulphur cluster biosynthesis CP439_RS11980 PF11241 Protein of unknown function (DUF3043) CP439_RS11985 PF02277 Phosphoribosyltransferase CP439_RS11990 PF02654 Cobalamin-5-phosphate synthase CP439_RS12000 PF01063 Amino-transferase class IV CP439_RS12005 PF08669 Glycine cleavage T-protein C-terminal barrel domain CP439_RS12005 PF01571 Aminomethyltransferase folate-binding domain CP439_RS12010 PF00211 Adenylate and Guanylate cyclase catalytic domain CP439_RS12010 PF16701 Adenylate cyclase regulatory domain CP439_RS12015 PF02789 Cytosol aminopeptidase family, N-terminal domain CP439_RS12015 PF00883 Cytosol aminopeptidase family, catalytic domain CP439_RS12020 PF00561 alpha/beta hydrolase fold CP439_RS12020 PF00106 short chain dehydrogenase CP439_RS12025 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CP439_RS12025 PF00364 Biotin-requiring enzyme CP439_RS12025 PF02817 e3 binding domain CP439_RS12030 PF01370 NAD dependent epimerase/dehydratase family CP439_RS12030 PF08338 Domain of unknown function (DUF1731) CP439_RS12035 PF03099 Biotin/lipoate A/B protein ligase family CP439_RS12040 PF04055 Radical SAM superfamily CP439_RS12040 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CP439_RS12045 PF13829 Domain of unknown function (DUF4191) CP439_RS12055 PF00120 Glutamine synthetase, catalytic domain CP439_RS12055 PF03951 Glutamine synthetase, beta-Grasp domain CP439_RS12060 PF08335 GlnD PII-uridylyltransferase CP439_RS12060 PF03710 Glutamate-ammonia ligase adenylyltransferase CP439_RS12065 PF00120 Glutamine synthetase, catalytic domain CP439_RS12065 PF03951 Glutamine synthetase, beta-Grasp domain CP439_RS12070 PF00561 alpha/beta hydrolase fold CP439_RS12070 PF08386 TAP-like protein CP439_RS12075 PF00561 alpha/beta hydrolase fold CP439_RS12080 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain CP439_RS12080 PF06974 Protein of unknown function (DUF1298) CP439_RS12085 PF02548 Ketopantoate hydroxymethyltransferase CP439_RS12090 PF05235 CHAD domain CP439_RS12090 PF01928 CYTH domain CP439_RS12100 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA CP439_RS12105 PF13456 Reverse transcriptase-like CP439_RS12105 PF00300 Histidine phosphatase superfamily (branch 1) CP439_RS12110 PF02591 C4-type zinc ribbon domain CP439_RS12115 PF01784 NIF3 (NGG1p interacting factor 3) CP439_RS12120 PF00155 Aminotransferase class I and II CP439_RS12135 PF13419 Haloacid dehalogenase-like hydrolase CP439_RS12140 PF01451 Low molecular weight phosphotyrosine protein phosphatase CP439_RS12145 PF02104 SURF1 family CP439_RS12150 PF03186 CobD/Cbib protein CP439_RS12155 PF09995 Uncharacterized protein conserved in bacteria (DUF2236) CP439_RS12170 PF00578 AhpC/TSA family CP439_RS12175 PF11253 Protein of unknown function (DUF3052) CP439_RS12185 PF00456 Transketolase, thiamine diphosphate binding domain CP439_RS12185 PF17831 Pyruvate dehydrogenase E1 component middle domain CP439_RS12190 PF13556 PucR C-terminal helix-turn-helix domain CP439_RS12190 PF17853 GGDEF-like domain CP439_RS12195 PF00698 Acyl transferase domain CP439_RS12200 PF00550 Phosphopantetheine attachment site CP439_RS12205 PF00109 Beta-ketoacyl synthase, N-terminal domain CP439_RS12205 PF02801 Beta-ketoacyl synthase, C-terminal domain CP439_RS12210 PF02801 Beta-ketoacyl synthase, C-terminal domain CP439_RS12210 PF00109 Beta-ketoacyl synthase, N-terminal domain CP439_RS12215 PF01039 Carboxyl transferase domain CP439_RS12225 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CP439_RS12225 PF01266 FAD dependent oxidoreductase CP439_RS12230 PF00440 Bacterial regulatory proteins, tetR family CP439_RS12235 PF01565 FAD binding domain CP439_RS12235 PF02913 FAD linked oxidases, C-terminal domain CP439_RS12240 PF00781 Diacylglycerol kinase catalytic domain CP439_RS12275 PF13847 Methyltransferase domain CP439_RS12285 PF00107 Zinc-binding dehydrogenase CP439_RS12285 PF08240 Alcohol dehydrogenase GroES-like domain CP439_RS12295 PF00795 Carbon-nitrogen hydrolase CP439_RS12300 PF00106 short chain dehydrogenase CP439_RS12310 PF07690 Major Facilitator Superfamily CP439_RS12315 PF00067 Cytochrome P450 CP439_RS12325 PF00067 Cytochrome P450 CP439_RS12340 PF10905 Protein of unknown function (DUF2695) CP439_RS12345 PF02656 Domain of unknown function (DUF202) CP439_RS12350 PF02656 Domain of unknown function (DUF202) CP439_RS12360 PF16715 Cyclodipeptide synthase CP439_RS12365 PF00067 Cytochrome P450 CP439_RS12370 PF03009 Glycerophosphoryl diester phosphodiesterase family CP439_RS12380 PF02913 FAD linked oxidases, C-terminal domain CP439_RS12380 PF01565 FAD binding domain CP439_RS12385 PF01384 Phosphate transporter family CP439_RS12390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CP439_RS12390 PF03466 LysR substrate binding domain CP439_RS12405 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain CP439_RS12405 PF06974 Protein of unknown function (DUF1298) CP439_RS12410 PF01323 DSBA-like thioredoxin domain CP439_RS12415 PF00999 Sodium/hydrogen exchanger family CP439_RS12425 PF02611 CDP-diacylglycerol pyrophosphatase CP439_RS12430 PF05481 Mycobacterium 19 kDa lipoprotein antigen CP439_RS12435 PF00581 Rhodanese-like domain CP439_RS12440 PF01048 Phosphorylase superfamily CP439_RS12445 PF01048 Phosphorylase superfamily CP439_RS12455 PF00155 Aminotransferase class I and II CP439_RS12460 PF03691 Uncharacterised protein family (UPF0167) CP439_RS12465 PF00561 alpha/beta hydrolase fold CP439_RS12475 PF00248 Aldo/keto reductase family CP439_RS12480 PF00183 Hsp90 protein CP439_RS12485 PF00753 Metallo-beta-lactamase superfamily CP439_RS12490 PF01083 Cutinase CP439_RS12495 PF08940 Domain of unknown function (DUF1918) CP439_RS12525 PF09335 SNARE associated Golgi protein CP439_RS12530 PF12146 Serine aminopeptidase, S33 CP439_RS12555 PF04255 Protein of unknown function (DUF433) CP439_RS12570 PF02899 Phage integrase, N-terminal SAM-like domain CP439_RS12570 PF00589 Phage integrase family CP439_RS12590 PF12728 Helix-turn-helix domain CP439_RS12620 PF00528 Binding-protein-dependent transport system inner membrane component CP439_RS12625 PF00528 Binding-protein-dependent transport system inner membrane component CP439_RS12635 PF00582 Universal stress protein family CP439_RS12640 PF13520 Amino acid permease CP439_RS12645 PF00202 Aminotransferase class-III CP439_RS12650 PF00202 Aminotransferase class-III CP439_RS12660 PF01037 Lrp/AsnC ligand binding domain CP439_RS12660 PF13404 AsnC-type helix-turn-helix domain CP439_RS12665 PF02361 Cobalt transport protein CP439_RS12670 PF00005 ABC transporter CP439_RS12685 PF00934 PE family CP439_RS12690 PF07690 Major Facilitator Superfamily CP439_RS12695 PF14041 LppP/LprE lipoprotein CP439_RS12710 PF00390 Malic enzyme, N-terminal domain CP439_RS12710 PF03949 Malic enzyme, NAD binding domain CP439_RS12715 PF07690 Major Facilitator Superfamily CP439_RS12720 PF00291 Pyridoxal-phosphate dependent enzyme CP439_RS12725 PF00132 Bacterial transferase hexapeptide (six repeats) CP439_RS12740 PF00899 ThiF family CP439_RS12750 PF03176 MMPL family CP439_RS12755 PF00934 PE family CP439_RS12775 PF01807 CHC2 zinc finger CP439_RS12775 PF13662 Toprim domain CP439_RS12775 PF08278 DNA primase DnaG DnaB-binding CP439_RS12775 PF10410 DnaB-helicase binding domain of primase CP439_RS12775 PF08275 DNA primase catalytic core, N-terminal domain CP439_RS12780 PF13286 Phosphohydrolase-associated domain CP439_RS12780 PF01966 HD domain CP439_RS12785 PF04536 TPM domain CP439_RS12790 PF06013 Proteins of 100 residues with WXG CP439_RS12795 PF06013 Proteins of 100 residues with WXG CP439_RS12805 PF04185 Phosphoesterase family CP439_RS12810 PF04185 Phosphoesterase family CP439_RS12815 PF04185 Phosphoesterase family CP439_RS12820 PF12484 Polymorphic PE/PPE proteins C terminal CP439_RS12820 PF00823 PPE family CP439_RS12845 PF01469 Pentapeptide repeats (8 copies) CP439_RS12845 PF00823 PPE family CP439_RS12850 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CP439_RS12850 PF03129 Anticodon binding domain CP439_RS12855 PF01022 Bacterial regulatory protein, arsR family CP439_RS12860 PF01475 Ferric uptake regulator family CP439_RS12870 PF01255 Putative undecaprenyl diphosphate synthase CP439_RS12875 PF11967 Recombination protein O N terminal CP439_RS12875 PF02565 Recombination protein O C terminal CP439_RS12880 PF01425 Amidase CP439_RS12885 PF07650 KH domain CP439_RS12885 PF01926 50S ribosome-binding GTPase CP439_RS12895 PF01595 Cyclin M transmembrane N-terminal domain CP439_RS12895 PF00571 CBS domain CP439_RS12895 PF03471 Transporter associated domain CP439_RS12900 PF02130 Uncharacterized protein family UPF0054 CP439_RS12905 PF02562 PhoH-like protein CP439_RS12920 PF00934 PE family CP439_RS12925 PF04452 RNA methyltransferase CP439_RS12930 PF01556 DnaJ C terminal domain CP439_RS12930 PF00226 DnaJ domain CP439_RS12930 PF00684 DnaJ central domain CP439_RS12935 PF01628 HrcA protein C terminal domain CP439_RS12950 PF03621 MbtH-like protein CP439_RS12955 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) CP439_RS12960 PF13193 AMP-binding enzyme C-terminal domain CP439_RS12960 PF07993 Male sterility protein CP439_RS12960 PF00550 Phosphopantetheine attachment site CP439_RS12960 PF00668 Condensation domain CP439_RS12960 PF00501 AMP-binding enzyme CP439_RS12965 PF00975 Thioesterase domain CP439_RS12965 PF00550 Phosphopantetheine attachment site CP439_RS12965 PF00668 Condensation domain CP439_RS12965 PF13193 AMP-binding enzyme C-terminal domain CP439_RS12965 PF00501 AMP-binding enzyme CP439_RS12970 PF00109 Beta-ketoacyl synthase, N-terminal domain CP439_RS12970 PF00975 Thioesterase domain CP439_RS12970 PF16197 Ketoacyl-synthetase C-terminal extension CP439_RS12970 PF08659 KR domain CP439_RS12970 PF00550 Phosphopantetheine attachment site CP439_RS12970 PF08990 Erythronolide synthase docking CP439_RS12970 PF00698 Acyl transferase domain CP439_RS12970 PF02801 Beta-ketoacyl synthase, C-terminal domain CP439_RS12975 PF00698 Acyl transferase domain CP439_RS12975 PF16197 Ketoacyl-synthetase C-terminal extension CP439_RS12975 PF00109 Beta-ketoacyl synthase, N-terminal domain CP439_RS12975 PF02801 Beta-ketoacyl synthase, C-terminal domain CP439_RS12975 PF08659 KR domain CP439_RS12975 PF00550 Phosphopantetheine attachment site CP439_RS12975 PF14765 Polyketide synthase dehydratase CP439_RS12980 PF00975 Thioesterase domain CP439_RS12980 PF00668 Condensation domain CP439_RS12980 PF13193 AMP-binding enzyme C-terminal domain CP439_RS12980 PF00550 Phosphopantetheine attachment site CP439_RS12980 PF00501 AMP-binding enzyme CP439_RS12985 PF00501 AMP-binding enzyme CP439_RS12985 PF13193 AMP-binding enzyme C-terminal domain CP439_RS12995 PF00425 chorismate binding enzyme CP439_RS13010 PF04055 Radical SAM superfamily CP439_RS13015 PF06737 Transglycosylase-like domain CP439_RS13030 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CP439_RS13030 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CP439_RS13035 PF01507 Phosphoadenosine phosphosulfate reductase family CP439_RS13050 PF03169 OPT oligopeptide transporter protein CP439_RS13065 PF00934 PE family CP439_RS13070 PF12857 TOBE-like domain CP439_RS13070 PF00005 ABC transporter CP439_RS13075 PF00528 Binding-protein-dependent transport system inner membrane component CP439_RS13080 PF00528 Binding-protein-dependent transport system inner membrane component CP439_RS13100 PF00723 Glycosyl hydrolases family 15 CP439_RS13110 PF00679 Elongation factor G C-terminus CP439_RS13110 PF00009 Elongation factor Tu GTP binding domain CP439_RS13110 PF06421 GTP-binding protein LepA C-terminus CP439_RS13125 PF12706 Beta-lactamase superfamily domain CP439_RS13145 PF01841 Transglutaminase-like superfamily CP439_RS13145 PF08379 Bacterial transglutaminase-like N-terminal region CP439_RS13155 PF04174 A circularly permuted ATPgrasp CP439_RS13160 PF01649 Ribosomal protein S20 CP439_RS13175 PF10531 SLBB domain CP439_RS13180 PF17668 Acetyltransferase (GNAT) domain CP439_RS13180 PF13530 Sterol carrier protein domain CP439_RS13185 PF02645 Uncharacterised protein, DegV family COG1307 CP439_RS13195 PF00300 Histidine phosphatase superfamily (branch 1) CP439_RS13205 PF01467 Cytidylyltransferase-like CP439_RS13235 PF00004 ATPase family associated with various cellular activities (AAA) CP439_RS13235 PF07724 AAA domain (Cdc48 subfamily) CP439_RS13235 PF02861 Clp amino terminal domain, pathogenicity island component CP439_RS13235 PF10431 C-terminal, D2-small domain, of ClpB protein CP439_RS13235 PF17871 AAA lid domain CP439_RS13240 PF00171 Aldehyde dehydrogenase family CP439_RS13245 PF03466 LysR substrate binding domain CP439_RS13245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CP439_RS13250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CP439_RS13250 PF03466 LysR substrate binding domain CP439_RS13255 PF00578 AhpC/TSA family CP439_RS13260 PF02627 Carboxymuconolactone decarboxylase family CP439_RS13265 PF00823 PPE family CP439_RS13270 PF00934 PE family CP439_RS13285 PF00924 Mechanosensitive ion channel CP439_RS13290 PF00672 HAMP domain CP439_RS13290 PF18698 Histidine kinase sensor domain CP439_RS13290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CP439_RS13290 PF00512 His Kinase A (phospho-acceptor) domain CP439_RS13300 PF00294 pfkB family carbohydrate kinase CP439_RS13315 PF00795 Carbon-nitrogen hydrolase CP439_RS13315 PF02540 NAD synthase CP439_RS13320 PF01472 PUA domain CP439_RS13320 PF00696 Amino acid kinase family CP439_RS13325 PF01018 GTP1/OBG CP439_RS13325 PF01926 50S ribosome-binding GTPase CP439_RS13325 PF09269 Domain of unknown function (DUF1967) CP439_RS13330 PF01016 Ribosomal L27 protein CP439_RS13335 PF00829 Ribosomal prokaryotic L21 protein CP439_RS13345 PF00375 Sodium:dicarboxylate symporter family CP439_RS13350 PF10150 Ribonuclease E/G family CP439_RS13355 PF00334 Nucleoside diphosphate kinase CP439_RS13365 PF02875 Mur ligase family, glutamate ligase domain CP439_RS13365 PF08245 Mur ligase middle domain CP439_RS13370 PF10458 Valyl tRNA synthetase tRNA binding arm CP439_RS13370 PF08264 Anticodon-binding domain of tRNA CP439_RS13370 PF00133 tRNA synthetases class I (I, L, M and V) CP439_RS13375 PF03435 Saccharopine dehydrogenase NADP binding domain CP439_RS13380 PF06737 Transglycosylase-like domain CP439_RS13395 PF12804 MobA-like NTP transferase domain CP439_RS13400 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CP439_RS13405 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CP439_RS13405 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CP439_RS13405 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CP439_RS13410 PF07690 Major Facilitator Superfamily CP439_RS13415 PF06689 ClpX C4-type zinc finger CP439_RS13415 PF10431 C-terminal, D2-small domain, of ClpB protein CP439_RS13415 PF07724 AAA domain (Cdc48 subfamily) CP439_RS13420 PF02574 Homocysteine S-methyltransferase CP439_RS13425 PF07690 Major Facilitator Superfamily CP439_RS13430 PF00574 Clp protease CP439_RS13435 PF00574 Clp protease CP439_RS13440 PF05698 Bacterial trigger factor protein (TF) C-terminus CP439_RS13440 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CP439_RS13440 PF05697 Bacterial trigger factor protein (TF) CP439_RS13455 PF00144 Beta-lactamase CP439_RS13460 PF06827 Zinc finger found in FPG and IleRS CP439_RS13460 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CP439_RS13460 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CP439_RS13465 PF02502 Ribose/Galactose Isomerase CP439_RS13470 PF01323 DSBA-like thioredoxin domain CP439_RS13475 PF11838 ERAP1-like C-terminal domain CP439_RS13475 PF01433 Peptidase family M1 domain CP439_RS13480 PF17174 Domain of unknown function (DUF5130) CP439_RS13495 PF01152 Bacterial-like globin CP439_RS13500 PF00128 Alpha amylase, catalytic domain CP439_RS13520 PF03061 Thioesterase superfamily CP439_RS13525 PF05088 Bacterial NAD-glutamate dehydrogenase CP439_RS13530 PF00005 ABC transporter CP439_RS13530 PF12848 ABC transporter CP439_RS13560 PF01553 Acyltransferase CP439_RS13570 PF06974 Protein of unknown function (DUF1298) CP439_RS13570 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain CP439_RS13575 PF07859 alpha/beta hydrolase fold CP439_RS13585 PF00378 Enoyl-CoA hydratase/isomerase CP439_RS13590 PF00934 PE family CP439_RS13595 PF00196 Bacterial regulatory proteins, luxR family CP439_RS13605 PF00934 PE family CP439_RS13630 PF01850 PIN domain CP439_RS13635 PF02817 e3 binding domain CP439_RS13635 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CP439_RS13635 PF00364 Biotin-requiring enzyme CP439_RS13640 PF02779 Transketolase, pyrimidine binding domain CP439_RS13640 PF02780 Transketolase, C-terminal domain CP439_RS13645 PF00676 Dehydrogenase E1 component CP439_RS13650 PF03328 HpcH/HpaI aldolase/citrate lyase family CP439_RS13655 PF01575 MaoC like domain CP439_RS13660 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CP439_RS13660 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CP439_RS13660 PF02770 Acyl-CoA dehydrogenase, middle domain CP439_RS13665 PF02785 Biotin carboxylase C-terminal domain CP439_RS13665 PF00289 Biotin carboxylase, N-terminal domain CP439_RS13665 PF00364 Biotin-requiring enzyme CP439_RS13665 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CP439_RS13670 PF01039 Carboxyl transferase domain CP439_RS13675 PF01144 Coenzyme A transferase CP439_RS13680 PF01144 Coenzyme A transferase CP439_RS13685 PF00501 AMP-binding enzyme CP439_RS13685 PF13193 AMP-binding enzyme C-terminal domain CP439_RS13705 PF00106 short chain dehydrogenase CP439_RS13710 PF05872 Bacterial protein of unknown function (DUF853) CP439_RS13715 PF00929 Exonuclease CP439_RS13730 PF00872 Transposase, Mutator family CP439_RS13780 PF17964 Bacterial Ig domain CP439_RS13780 PF03734 L,D-transpeptidase catalytic domain CP439_RS13790 PF00934 PE family CP439_RS13800 PF00578 AhpC/TSA family CP439_RS13805 PF07687 Peptidase dimerisation domain CP439_RS13805 PF01546 Peptidase family M20/M25/M40 CP439_RS13810 PF01648 4'-phosphopantetheinyl transferase superfamily CP439_RS13815 PF02801 Beta-ketoacyl synthase, C-terminal domain CP439_RS13815 PF00109 Beta-ketoacyl synthase, N-terminal domain CP439_RS13825 PF08924 Domain of unknown function (DUF1906) CP439_RS13835 PF09957 Bacterial antitoxin of type II TA system, VapB CP439_RS13840 PF01850 PIN domain CP439_RS13845 PF04471 Restriction endonuclease CP439_RS13845 PF14338 Mrr N-terminal domain CP439_RS13850 PF07669 Eco57I restriction-modification methylase CP439_RS13855 PF01850 PIN domain CP439_RS13865 PF01276 Orn/Lys/Arg decarboxylase, major domain CP439_RS13865 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CP439_RS13865 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CP439_RS13875 PF01029 NusB family CP439_RS13880 PF09285 Elongation factor P, C-terminal CP439_RS13880 PF01132 Elongation factor P (EF-P) OB domain CP439_RS13880 PF08207 Elongation factor P (EF-P) KOW-like domain CP439_RS13885 PF00557 Metallopeptidase family M24 CP439_RS13885 PF01321 Creatinase/Prolidase N-terminal domain CP439_RS13895 PF01220 Dehydroquinase class II CP439_RS13900 PF01761 3-dehydroquinate synthase CP439_RS13905 PF01202 Shikimate kinase CP439_RS13910 PF01264 Chorismate synthase CP439_RS13920 PF06259 Alpha/beta hydrolase CP439_RS13930 PF16708 Lipoprotein confined to pathogenic Mycobacterium CP439_RS13935 PF16708 Lipoprotein confined to pathogenic Mycobacterium CP439_RS13940 PF09957 Bacterial antitoxin of type II TA system, VapB CP439_RS13945 PF01850 PIN domain CP439_RS13950 PF01402 Ribbon-helix-helix protein, copG family CP439_RS13955 PF01850 PIN domain CP439_RS13965 PF01850 PIN domain CP439_RS13970 PF01402 Ribbon-helix-helix protein, copG family CP439_RS13985 PF08501 Shikimate dehydrogenase substrate binding domain CP439_RS13985 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CP439_RS13990 PF02618 YceG-like family CP439_RS13995 PF03652 Holliday junction resolvase CP439_RS14000 PF01411 tRNA synthetases class II (A) CP439_RS14000 PF02272 DHHA1 domain CP439_RS14000 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CP439_RS14005 PF01894 Uncharacterised protein family UPF0047 CP439_RS14020 PF12002 MgsA AAA+ ATPase C terminal CP439_RS14020 PF16193 AAA C-terminal domain CP439_RS14020 PF00004 ATPase family associated with various cellular activities (AAA) CP439_RS14040 PF10851 Protein of unknown function (DUF2652) CP439_RS14050 PF00005 ABC transporter CP439_RS14050 PF00027 Cyclic nucleotide-binding domain CP439_RS14055 PF01734 Patatin-like phospholipase CP439_RS14055 PF00027 Cyclic nucleotide-binding domain CP439_RS14065 PF04168 A predicted alpha-helical domain with a conserved ER motif. CP439_RS14065 PF14403 Circularly permuted ATP-grasp type 2 CP439_RS14070 PF10005 zinc-ribbon domain CP439_RS14070 PF15887 Putative zinc-binding metallo-peptidase CP439_RS14075 PF01841 Transglutaminase-like superfamily CP439_RS14075 PF08379 Bacterial transglutaminase-like N-terminal region CP439_RS14090 PF01336 OB-fold nucleic acid binding domain CP439_RS14090 PF02938 GAD domain CP439_RS14090 PF00152 tRNA synthetases class II (D, K and N) CP439_RS14095 PF02558 Ketopantoate reductase PanE/ApbA CP439_RS14095 PF08546 Ketopantoate reductase PanE/ApbA C terminal CP439_RS14100 PF10604 Polyketide cyclase / dehydrase and lipid transport CP439_RS14105 PF04228 Putative neutral zinc metallopeptidase CP439_RS14115 PF16656 Purple acid Phosphatase, N-terminal domain CP439_RS14115 PF00149 Calcineurin-like phosphoesterase CP439_RS14120 PF04055 Radical SAM superfamily CP439_RS14125 PF00561 alpha/beta hydrolase fold CP439_RS14130 PF13393 Histidyl-tRNA synthetase CP439_RS14130 PF03129 Anticodon binding domain CP439_RS14135 PF00753 Metallo-beta-lactamase superfamily CP439_RS14140 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CP439_RS14145 PF13291 ACT domain CP439_RS14145 PF04607 Region found in RelA / SpoT proteins CP439_RS14145 PF02824 TGS domain CP439_RS14150 PF00156 Phosphoribosyl transferase domain CP439_RS14155 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CP439_RS14160 PF02355 Protein export membrane protein CP439_RS14160 PF07549 SecD/SecF GG Motif CP439_RS14165 PF02355 Protein export membrane protein CP439_RS14165 PF07549 SecD/SecF GG Motif CP439_RS14170 PF02699 Preprotein translocase subunit CP439_RS14180 PF00202 Aminotransferase class-III CP439_RS14185 PF07993 Male sterility protein CP439_RS14185 PF00501 AMP-binding enzyme CP439_RS14185 PF00550 Phosphopantetheine attachment site CP439_RS14190 PF00934 PE family CP439_RS14195 PF05496 Holliday junction DNA helicase RuvB P-loop domain CP439_RS14195 PF17864 RuvB AAA lid domain CP439_RS14195 PF05491 RuvB C-terminal winged helix domain CP439_RS14200 PF07499 RuvA, C-terminal domain CP439_RS14200 PF01330 RuvA N terminal domain CP439_RS14205 PF02075 Crossover junction endodeoxyribonuclease RuvC CP439_RS14210 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CP439_RS14215 PF01850 PIN domain CP439_RS14220 PF13785 Domain of unknown function (DUF4178) CP439_RS14225 PF10936 Protein of unknown function DUF2617 CP439_RS14230 PF14042 Domain of unknown function (DUF4247) CP439_RS14235 PF03994 Domain of Unknown Function (DUF350) CP439_RS14250 PF01850 PIN domain CP439_RS14255 PF01709 Transcriptional regulator CP439_RS14260 PF01174 SNO glutamine amidotransferase family CP439_RS14270 PF01680 SOR/SNZ family CP439_RS14275 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CP439_RS14275 PF01243 Pyridoxamine 5'-phosphate oxidase CP439_RS14280 PF00823 PPE family CP439_RS14280 PF08237 PE-PPE domain CP439_RS14285 PF03099 Biotin/lipoate A/B protein ligase family CP439_RS14285 PF00293 NUDIX domain CP439_RS14290 PF13439 Glycosyltransferase Family 4 CP439_RS14295 PF03279 Bacterial lipid A biosynthesis acyltransferase CP439_RS14300 PF01066 CDP-alcohol phosphatidyltransferase CP439_RS14305 PF01230 HIT domain CP439_RS14310 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CP439_RS14310 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CP439_RS14310 PF03129 Anticodon binding domain CP439_RS14320 PF01436 NHL repeat CP439_RS14320 PF00934 PE family CP439_RS14325 PF09348 Domain of unknown function (DUF1990) CP439_RS14360 PF00582 Universal stress protein family CP439_RS14365 PF00582 Universal stress protein family CP439_RS14370 PF00571 CBS domain CP439_RS14370 PF02163 Peptidase family M50 CP439_RS14375 PF00571 CBS domain CP439_RS14390 PF18844 Bacterial archaeo-eukaryotic release factor family 2 CP439_RS14395 PF01951 Archease protein family (MTH1598/TM1083) CP439_RS14400 PF01139 tRNA-splicing ligase RtcB CP439_RS14405 PF08962 Domain of unknown function (DUF1876) CP439_RS14410 PF01814 Hemerythrin HHE cation binding domain CP439_RS14420 PF00934 PE family CP439_RS14435 PF09335 SNARE associated Golgi protein CP439_RS14440 PF01740 STAS domain CP439_RS14445 PF02694 Uncharacterised BCR, YnfA/UPF0060 family CP439_RS14455 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CP439_RS14465 PF01758 Sodium Bile acid symporter family CP439_RS14470 PF11455 Protein of unknown function (DUF3018) CP439_RS14475 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system CP439_RS14505 PF00589 Phage integrase family CP439_RS14505 PF02899 Phage integrase, N-terminal SAM-like domain CP439_RS14515 PF05423 Mycobacterium membrane protein CP439_RS14555 PF10888 Protein of unknown function (DUF2742) CP439_RS14570 PF00589 Phage integrase family CP439_RS14570 PF14659 Phage integrase, N-terminal SAM-like domain CP439_RS14615 PF02861 Clp amino terminal domain, pathogenicity island component CP439_RS14625 PF00583 Acetyltransferase (GNAT) family CP439_RS14645 PF09594 Glycosyltransferase family 87 CP439_RS14655 PF01641 SelR domain CP439_RS14660 PF13847 Methyltransferase domain CP439_RS14665 PF06778 Chlorite dismutase CP439_RS14670 PF01593 Flavin containing amine oxidoreductase CP439_RS14675 PF01208 Uroporphyrinogen decarboxylase (URO-D) CP439_RS14680 PF00378 Enoyl-CoA hydratase/isomerase CP439_RS14695 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CP439_RS14695 PF02780 Transketolase, C-terminal domain CP439_RS14695 PF02779 Transketolase, pyrimidine binding domain CP439_RS14710 PF03600 Citrate transporter CP439_RS14715 PF03600 Citrate transporter CP439_RS14730 PF00005 ABC transporter CP439_RS14735 PF01938 TRAM domain CP439_RS14735 PF05958 tRNA (Uracil-5-)-methyltransferase CP439_RS14745 PF13520 Amino acid permease CP439_RS14750 PF02080 TrkA-C domain CP439_RS14750 PF02254 TrkA-N domain CP439_RS14755 PF02254 TrkA-N domain CP439_RS14755 PF02080 TrkA-C domain CP439_RS14780 PF00692 dUTPase CP439_RS14800 PF00459 Inositol monophosphatase family CP439_RS14805 PF00480 ROK family CP439_RS14810 PF04539 Sigma-70 region 3 CP439_RS14810 PF04542 Sigma-70 region 2 CP439_RS14810 PF00140 Sigma-70 factor, region 1.2 CP439_RS14810 PF04545 Sigma-70, region 4 CP439_RS14845 PF04542 Sigma-70 region 2 CP439_RS14845 PF04539 Sigma-70 region 3 CP439_RS14845 PF04545 Sigma-70, region 4 CP439_RS14845 PF00140 Sigma-70 factor, region 1.2 CP439_RS14850 PF18357 Diphteria toxin repressor SH3 domain CP439_RS14850 PF02742 Iron dependent repressor, metal binding and dimerisation domain CP439_RS14850 PF01325 Iron dependent repressor, N-terminal DNA binding domain CP439_RS14860 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CP439_RS14860 PF07992 Pyridine nucleotide-disulphide oxidoreductase CP439_RS14870 PF12697 Alpha/beta hydrolase family CP439_RS14875 PF02567 Phenazine biosynthesis-like protein CP439_RS14880 PF08768 Domain of unknown function (DUF1794) CP439_RS14885 PF03477 ATP cone domain CP439_RS14890 PF01476 LysM domain CP439_RS14895 PF00717 Peptidase S24-like CP439_RS14895 PF01726 LexA DNA binding domain CP439_RS14910 PF03741 Integral membrane protein TerC family CP439_RS14915 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CP439_RS14915 PF02770 Acyl-CoA dehydrogenase, middle domain CP439_RS14915 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CP439_RS14920 PF16360 GTP-binding GTPase Middle Region CP439_RS14920 PF13167 GTP-binding GTPase N-terminal CP439_RS14920 PF01926 50S ribosome-binding GTPase CP439_RS14925 PF01678 Diaminopimelate epimerase CP439_RS14950 PF03993 Domain of Unknown Function (DUF349) CP439_RS14955 PF04055 Radical SAM superfamily CP439_RS14955 PF00919 Uncharacterized protein family UPF0004 CP439_RS14960 PF04055 Radical SAM superfamily CP439_RS14960 PF00919 Uncharacterized protein family UPF0004 CP439_RS14980 PF02631 RecX family CP439_RS14985 PF00154 recA bacterial DNA recombination protein CP439_RS14985 PF14528 LAGLIDADG-like domain CP439_RS14995 PF11248 Protein of unknown function (DUF3046) CP439_RS15005 PF07858 Limonene-1,2-epoxide hydrolase catalytic domain CP439_RS15015 PF00934 PE family CP439_RS15020 PF11248 Protein of unknown function (DUF3046) CP439_RS15030 PF04012 PspA/IM30 family CP439_RS15040 PF01066 CDP-alcohol phosphatidyltransferase CP439_RS15045 PF00583 Acetyltransferase (GNAT) family CP439_RS15050 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CP439_RS15050 PF01580 FtsK/SpoIIIE family CP439_RS15050 PF17854 FtsK alpha domain CP439_RS15050 PF09397 Ftsk gamma domain CP439_RS15065 PF04072 Leucine carboxyl methyltransferase CP439_RS15070 PF12706 Beta-lactamase superfamily domain CP439_RS15070 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CP439_RS15070 PF17770 Ribonuclease J C-terminal domain CP439_RS15075 PF00701 Dihydrodipicolinate synthetase family CP439_RS15080 PF02511 Thymidylate synthase complementing protein CP439_RS15090 PF02384 N-6 DNA Methylase CP439_RS15095 PF01850 PIN domain CP439_RS15100 PF09957 Bacterial antitoxin of type II TA system, VapB CP439_RS15105 PF01850 PIN domain CP439_RS15110 PF07704 Rv0623-like transcription factor CP439_RS15125 PF00186 Dihydrofolate reductase CP439_RS15130 PF00303 Thymidylate synthase CP439_RS15155 PF12484 Polymorphic PE/PPE proteins C terminal CP439_RS15155 PF00823 PPE family CP439_RS15160 PF00934 PE family CP439_RS15165 PF00823 PPE family CP439_RS15165 PF12484 Polymorphic PE/PPE proteins C terminal CP439_RS15180 PF05173 Dihydrodipicolinate reductase, C-terminus CP439_RS15180 PF01113 Dihydrodipicolinate reductase, N-terminus CP439_RS15195 PF00175 Oxidoreductase NAD-binding domain CP439_RS15195 PF00970 Oxidoreductase FAD-binding domain CP439_RS15195 PF00111 2Fe-2S iron-sulfur cluster binding domain CP439_RS15210 PF01037 Lrp/AsnC ligand binding domain CP439_RS15215 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CP439_RS15215 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CP439_RS15220 PF03060 Nitronate monooxygenase CP439_RS15225 PF05193 Peptidase M16 inactive domain CP439_RS15225 PF00675 Insulinase (Peptidase family M16) CP439_RS15230 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CP439_RS15230 PF00575 S1 RNA binding domain CP439_RS15230 PF01138 3' exoribonuclease family, domain 1 CP439_RS15230 PF00013 KH domain CP439_RS15240 PF00312 Ribosomal protein S15 CP439_RS15245 PF06574 FAD synthetase CP439_RS15245 PF01687 Riboflavin kinase CP439_RS15260 PF02770 Acyl-CoA dehydrogenase, middle domain CP439_RS15260 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CP439_RS15260 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CP439_RS15265 PF00108 Thiolase, N-terminal domain CP439_RS15265 PF02803 Thiolase, C-terminal domain CP439_RS15270 PF01385 Probable transposase CP439_RS15270 PF12323 Helix-turn-helix domain CP439_RS15270 PF07282 Putative transposase DNA-binding domain CP439_RS15275 PF00239 Resolvase, N terminal domain CP439_RS15280 PF01509 TruB family pseudouridylate synthase (N terminal domain) CP439_RS15280 PF09142 tRNA Pseudouridine synthase II, C terminal CP439_RS15280 PF16198 tRNA pseudouridylate synthase B C-terminal domain CP439_RS15285 PF01648 4'-phosphopantetheinyl transferase superfamily CP439_RS15285 PF17837 4'-phosphopantetheinyl transferase N-terminal domain CP439_RS15290 PF00149 Calcineurin-like phosphoesterase CP439_RS15320 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system CP439_RS15325 PF01402 Ribbon-helix-helix protein, copG family CP439_RS15395 PF09827 CRISPR associated protein Cas2 CP439_RS15400 PF01867 CRISPR associated protein Cas1 CP439_RS15405 PF09659 CRISPR-associated protein (Cas_Csm6) CP439_RS15410 PF03787 RAMP superfamily CP439_RS15415 PF17953 CRISPR Csm4 C-terminal domain CP439_RS15420 PF03787 RAMP superfamily CP439_RS15425 PF03750 Csm2 Type III-A CP439_RS15430 PF18211 Csm1 subunit domain B CP439_RS15435 PF10040 CRISPR-associated endoribonuclease Cas6 CP439_RS15465 PF01850 PIN domain CP439_RS15470 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system CP439_RS15475 PF00378 Enoyl-CoA hydratase/isomerase CP439_RS15480 PF00005 ABC transporter CP439_RS15480 PF17912 MalK OB fold domain CP439_RS15485 PF13416 Bacterial extracellular solute-binding protein CP439_RS15490 PF00528 Binding-protein-dependent transport system inner membrane component CP439_RS15495 PF00528 Binding-protein-dependent transport system inner membrane component CP439_RS15505 PF02272 DHHA1 domain CP439_RS15505 PF01368 DHH family CP439_RS15510 PF02033 Ribosome-binding factor A CP439_RS15515 PF04760 Translation initiation factor IF-2, N-terminal region CP439_RS15515 PF11987 Translation-initiation factor 2 CP439_RS15515 PF00009 Elongation factor Tu GTP binding domain CP439_RS15525 PF13184 NusA-like KH domain CP439_RS15525 PF08529 NusA N-terminal domain CP439_RS15530 PF17384 RimP C-terminal SH3 domain CP439_RS15530 PF02576 RimP N-terminal domain CP439_RS15545 PF04073 Aminoacyl-tRNA editing domain CP439_RS15545 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CP439_RS15545 PF03129 Anticodon binding domain CP439_RS15550 PF07690 Major Facilitator Superfamily CP439_RS15555 PF10414 Sirohaem synthase dimerisation region CP439_RS15555 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CP439_RS15560 PF07685 CobB/CobQ-like glutamine amidotransferase domain CP439_RS15560 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CP439_RS15565 PF12557 Cob(I)alamin adenosyltransferase N terminal CP439_RS15565 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CP439_RS15570 PF13519 von Willebrand factor type A domain CP439_RS15570 PF17863 AAA lid domain CP439_RS15570 PF07728 AAA domain (dynein-related subfamily) CP439_RS15575 PF13673 Acetyltransferase (GNAT) domain CP439_RS15580 PF06039 Malate:quinone oxidoreductase (Mqo) CP439_RS15585 PF00934 PE family CP439_RS15595 PF07992 Pyridine nucleotide-disulphide oxidoreductase CP439_RS15595 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CP439_RS15600 PF03824 High-affinity nickel-transport protein CP439_RS15615 PF00171 Aldehyde dehydrogenase family CP439_RS15620 PF07722 Peptidase C26 CP439_RS15625 PF00120 Glutamine synthetase, catalytic domain CP439_RS15630 PF00557 Metallopeptidase family M24 CP439_RS15645 PF01850 PIN domain CP439_RS15655 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system CP439_RS15660 PF05016 ParE toxin of type II toxin-antitoxin system, parDE CP439_RS15670 PF04551 GcpE protein CP439_RS15675 PF17820 PDZ domain CP439_RS15675 PF02163 Peptidase family M50 CP439_RS15680 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CP439_RS15680 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CP439_RS15680 PF13288 DXP reductoisomerase C-terminal domain CP439_RS15685 PF01402 Ribbon-helix-helix protein, copG family CP439_RS15690 PF01850 PIN domain CP439_RS15695 PF02469 Fasciclin domain CP439_RS15700 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system CP439_RS15705 PF02683 Cytochrome C biogenesis protein transmembrane region CP439_RS15705 PF00578 AhpC/TSA family CP439_RS15705 PF17991 Thioredoxin like C-terminal domain CP439_RS15710 PF02469 Fasciclin domain CP439_RS15715 PF10939 Protein of unknown function (DUF2631) CP439_RS15720 PF02683 Cytochrome C biogenesis protein transmembrane region CP439_RS15725 PF00578 AhpC/TSA family CP439_RS15730 PF04055 Radical SAM superfamily CP439_RS15740 PF01765 Ribosome recycling factor CP439_RS15750 PF00696 Amino acid kinase family CP439_RS15755 PF00486 Transcriptional regulatory protein, C terminal CP439_RS15760 PF12323 Helix-turn-helix domain CP439_RS15760 PF07282 Putative transposase DNA-binding domain CP439_RS15760 PF01385 Probable transposase CP439_RS15765 PF00239 Resolvase, N terminal domain CP439_RS15770 PF01047 MarR family CP439_RS15775 PF01425 Amidase CP439_RS15780 PF00889 Elongation factor TS CP439_RS15785 PF00318 Ribosomal protein S2 CP439_RS15790 PF01551 Peptidase family M23 CP439_RS15795 PF12484 Polymorphic PE/PPE proteins C terminal CP439_RS15795 PF00823 PPE family CP439_RS15805 PF02899 Phage integrase, N-terminal SAM-like domain CP439_RS15805 PF00589 Phage integrase family CP439_RS15810 PF08021 Siderophore-interacting FAD-binding domain CP439_RS15810 PF04954 Siderophore-interacting protein CP439_RS15815 PF17782 DprA winged helix domain CP439_RS15815 PF02481 DNA recombination-mediator protein A CP439_RS15820 PF01078 Magnesium chelatase, subunit ChlI CP439_RS15820 PF13335 Magnesium chelatase, subunit ChlI C-terminal CP439_RS15825 PF02021 Uncharacterised protein family UPF0102 CP439_RS15830 PF02634 FdhD/NarQ family CP439_RS15835 PF01568 Molydopterin dinucleotide binding domain CP439_RS15835 PF00384 Molybdopterin oxidoreductase CP439_RS15840 PF10611 Protein of unknown function (DUF2469) CP439_RS15845 PF01351 Ribonuclease HII CP439_RS15850 PF10502 Signal peptidase, peptidase S26 CP439_RS15855 PF01245 Ribosomal protein L19 CP439_RS15865 PF01746 tRNA (Guanine-1)-methyltransferase CP439_RS15870 PF01782 RimM N-terminal domain CP439_RS15870 PF05239 PRC-barrel domain CP439_RS15880 PF00886 Ribosomal protein S16 CP439_RS15885 PF13577 SnoaL-like domain CP439_RS15890 PF00768 D-alanyl-D-alanine carboxypeptidase CP439_RS15895 PF00440 Bacterial regulatory proteins, tetR family CP439_RS15900 PF07969 Amidohydrolase family CP439_RS15905 PF00069 Protein kinase domain CP439_RS15910 PF01979 Amidohydrolase family CP439_RS15915 PF02978 Signal peptide binding domain CP439_RS15915 PF00448 SRP54-type protein, GTPase domain CP439_RS15915 PF02881 SRP54-type protein, helical bundle domain CP439_RS15920 PF04851 Type III restriction enzyme, res subunit CP439_RS15925 PF01966 HD domain CP439_RS15925 PF08335 GlnD PII-uridylyltransferase CP439_RS15930 PF00543 Nitrogen regulatory protein P-II CP439_RS15935 PF00909 Ammonium Transporter Family CP439_RS15945 PF00448 SRP54-type protein, GTPase domain CP439_RS15945 PF02881 SRP54-type protein, helical bundle domain CP439_RS15950 PF02463 RecF/RecN/SMC N terminal domain CP439_RS15950 PF06470 SMC proteins Flexible Hinge Domain CP439_RS15955 PF00708 Acylphosphatase CP439_RS15960 PF02566 OsmC-like protein CP439_RS15965 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CP439_RS15965 PF06827 Zinc finger found in FPG and IleRS CP439_RS15965 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CP439_RS15975 PF00035 Double-stranded RNA binding motif CP439_RS15975 PF14622 Ribonuclease-III-like CP439_RS15980 PF02620 Large ribosomal RNA subunit accumulation protein YceD CP439_RS15990 PF00975 Thioesterase domain CP439_RS16000 PF00501 AMP-binding enzyme CP439_RS16005 PF14765 Polyketide synthase dehydratase CP439_RS16005 PF02801 Beta-ketoacyl synthase, C-terminal domain CP439_RS16005 PF08659 KR domain CP439_RS16005 PF00109 Beta-ketoacyl synthase, N-terminal domain CP439_RS16005 PF16197 Ketoacyl-synthetase C-terminal extension CP439_RS16005 PF00550 Phosphopantetheine attachment site CP439_RS16005 PF00698 Acyl transferase domain CP439_RS16010 PF08659 KR domain CP439_RS16010 PF00109 Beta-ketoacyl synthase, N-terminal domain CP439_RS16010 PF16197 Ketoacyl-synthetase C-terminal extension CP439_RS16010 PF00698 Acyl transferase domain CP439_RS16010 PF00550 Phosphopantetheine attachment site CP439_RS16010 PF02801 Beta-ketoacyl synthase, C-terminal domain CP439_RS16015 PF14765 Polyketide synthase dehydratase CP439_RS16015 PF08659 KR domain CP439_RS16015 PF02801 Beta-ketoacyl synthase, C-terminal domain CP439_RS16015 PF00109 Beta-ketoacyl synthase, N-terminal domain CP439_RS16015 PF16197 Ketoacyl-synthetase C-terminal extension CP439_RS16015 PF00550 Phosphopantetheine attachment site CP439_RS16015 PF08240 Alcohol dehydrogenase GroES-like domain CP439_RS16015 PF00698 Acyl transferase domain CP439_RS16020 PF00109 Beta-ketoacyl synthase, N-terminal domain CP439_RS16020 PF14765 Polyketide synthase dehydratase CP439_RS16020 PF00550 Phosphopantetheine attachment site CP439_RS16020 PF02801 Beta-ketoacyl synthase, C-terminal domain CP439_RS16020 PF16197 Ketoacyl-synthetase C-terminal extension CP439_RS16020 PF00698 Acyl transferase domain CP439_RS16020 PF08659 KR domain CP439_RS16025 PF02801 Beta-ketoacyl synthase, C-terminal domain CP439_RS16025 PF00109 Beta-ketoacyl synthase, N-terminal domain CP439_RS16025 PF16197 Ketoacyl-synthetase C-terminal extension CP439_RS16025 PF00550 Phosphopantetheine attachment site CP439_RS16025 PF00698 Acyl transferase domain CP439_RS16025 PF00668 Condensation domain CP439_RS16030 PF00005 ABC transporter CP439_RS16045 PF16911 Phthiocerol/phthiodiolone dimycocerosyl transferase C-terminus CP439_RS16050 PF00107 Zinc-binding dehydrogenase CP439_RS16050 PF02801 Beta-ketoacyl synthase, C-terminal domain CP439_RS16050 PF08659 KR domain CP439_RS16050 PF00550 Phosphopantetheine attachment site CP439_RS16050 PF16197 Ketoacyl-synthetase C-terminal extension CP439_RS16050 PF14765 Polyketide synthase dehydratase CP439_RS16050 PF00698 Acyl transferase domain CP439_RS16050 PF00109 Beta-ketoacyl synthase, N-terminal domain CP439_RS16050 PF08240 Alcohol dehydrogenase GroES-like domain CP439_RS16055 PF00501 AMP-binding enzyme CP439_RS16060 PF03176 MMPL family CP439_RS16080 PF07161 LppX_LprAFG lipoprotein CP439_RS16085 PF08240 Alcohol dehydrogenase GroES-like domain CP439_RS16085 PF00550 Phosphopantetheine attachment site CP439_RS16085 PF00698 Acyl transferase domain CP439_RS16085 PF14765 Polyketide synthase dehydratase CP439_RS16085 PF08659 KR domain CP439_RS16090 PF16197 Ketoacyl-synthetase C-terminal extension CP439_RS16090 PF00109 Beta-ketoacyl synthase, N-terminal domain CP439_RS16090 PF02801 Beta-ketoacyl synthase, C-terminal domain CP439_RS16095 PF13193 AMP-binding enzyme C-terminal domain CP439_RS16095 PF00501 AMP-binding enzyme CP439_RS16095 PF00550 Phosphopantetheine attachment site CP439_RS16100 PF01947 p-hydroxybenzoic acid synthase CP439_RS16105 PF00501 AMP-binding enzyme CP439_RS16115 PF00296 Luciferase-like monooxygenase CP439_RS16120 PF08241 Methyltransferase domain CP439_RS16125 PF03435 Saccharopine dehydrogenase NADP binding domain CP439_RS16145 PF00535 Glycosyl transferase family 2 CP439_RS16155 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase CP439_RS16160 PF04989 Cephalosporin hydroxylase CP439_RS16175 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase CP439_RS16180 PF03773 Predicted permease CP439_RS16185 PF00551 Formyl transferase CP439_RS16185 PF01842 ACT domain CP439_RS16200 PF01467 Cytidylyltransferase-like CP439_RS16210 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CP439_RS16210 PF02436 Conserved carboxylase domain CP439_RS16210 PF00364 Biotin-requiring enzyme CP439_RS16210 PF00289 Biotin carboxylase, N-terminal domain CP439_RS16210 PF02785 Biotin carboxylase C-terminal domain CP439_RS16210 PF00682 HMGL-like CP439_RS16225 PF07859 alpha/beta hydrolase fold CP439_RS16230 PF00248 Aldo/keto reductase family CP439_RS16235 PF00248 Aldo/keto reductase family CP439_RS16245 PF00271 Helicase conserved C-terminal domain CP439_RS16245 PF00270 DEAD/DEAH box helicase CP439_RS16245 PF17191 RecG wedge domain CP439_RS16250 PF13684 Dihydroxyacetone kinase family CP439_RS16250 PF02734 DAK2 domain CP439_RS16260 PF00830 Ribosomal L28 family CP439_RS16265 PF03167 Uracil DNA glycosylase superfamily CP439_RS16270 PF02769 AIR synthase related protein, C-terminal domain CP439_RS16270 PF00586 AIR synthase related protein, N-terminal domain CP439_RS16275 PF12323 Helix-turn-helix domain CP439_RS16275 PF07282 Putative transposase DNA-binding domain CP439_RS16275 PF01385 Probable transposase CP439_RS16280 PF00239 Resolvase, N terminal domain CP439_RS16290 PF07478 D-ala D-ala ligase C-terminus CP439_RS16290 PF01820 D-ala D-ala ligase N-terminus CP439_RS16295 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CP439_RS16295 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CP439_RS16300 PF01983 Guanylyl transferase CofC like CP439_RS16305 PF02503 Polyphosphate kinase middle domain CP439_RS16305 PF13090 Polyphosphate kinase C-terminal domain 2 CP439_RS16305 PF13089 Polyphosphate kinase N-terminal domain CP439_RS16305 PF17941 Polyphosphate kinase C-terminal domain 1 CP439_RS16310 PF00293 NUDIX domain CP439_RS16310 PF00300 Histidine phosphatase superfamily (branch 1) CP439_RS16315 PF00216 Bacterial DNA-binding protein CP439_RS16320 PF00694 Aconitase C-terminal domain CP439_RS16325 PF00330 Aconitase family (aconitate hydratase) CP439_RS16355 PF00749 tRNA synthetases class I (E and Q), catalytic domain CP439_RS16360 PF01557 Fumarylacetoacetate (FAA) hydrolase family CP439_RS16370 PF00180 Isocitrate/isopropylmalate dehydrogenase CP439_RS16375 PF01842 ACT domain CP439_RS16375 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CP439_RS16375 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CP439_RS16395 PF00672 HAMP domain CP439_RS16405 PF03649 Uncharacterised protein family (UPF0014) CP439_RS16410 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CP439_RS16410 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CP439_RS16415 PF10369 Small subunit of acetolactate synthase CP439_RS16415 PF01842 ACT domain CP439_RS16420 PF00205 Thiamine pyrophosphate enzyme, central domain CP439_RS16420 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CP439_RS16420 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CP439_RS16425 PF10756 Bacterial PH domain CP439_RS16430 PF07681 DoxX CP439_RS16450 PF02934 GatB/GatE catalytic domain CP439_RS16450 PF02637 GatB domain CP439_RS16455 PF00365 Phosphofructokinase CP439_RS16460 PF01425 Amidase CP439_RS16465 PF02686 Glu-tRNAGln amidotransferase C subunit CP439_RS16475 PF00533 BRCA1 C Terminus (BRCT) domain CP439_RS16475 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CP439_RS16475 PF01653 NAD-dependent DNA ligase adenylation domain CP439_RS16475 PF03120 NAD-dependent DNA ligase OB-fold domain CP439_RS16475 PF12826 Helix-hairpin-helix motif CP439_RS16495 PF00823 PPE family CP439_RS16500 PF00934 PE family CP439_RS16505 PF06013 Proteins of 100 residues with WXG CP439_RS16510 PF06013 Proteins of 100 residues with WXG CP439_RS16515 PF00823 PPE family CP439_RS16520 PF00934 PE family CP439_RS16525 PF00872 Transposase, Mutator family CP439_RS16540 PF00266 Aminotransferase class-V CP439_RS16555 PF01012 Electron transfer flavoprotein domain CP439_RS16555 PF00766 Electron transfer flavoprotein FAD-binding domain CP439_RS16560 PF01012 Electron transfer flavoprotein domain CP439_RS16565 PF08241 Methyltransferase domain CP439_RS16570 PF03065 Glycosyl hydrolase family 57 CP439_RS16570 PF09210 Domain of unknown function (DUF1957) CP439_RS16575 PF13439 Glycosyltransferase Family 4 CP439_RS16575 PF00534 Glycosyl transferases group 1 CP439_RS16590 PF00132 Bacterial transferase hexapeptide (six repeats) CP439_RS16595 PF13360 PQQ-like domain CP439_RS16600 PF11738 Protein of unknown function (DUF3298) CP439_RS16605 PF18096 THUMP domain-like CP439_RS16610 PF08241 Methyltransferase domain CP439_RS16615 PF00378 Enoyl-CoA hydratase/isomerase CP439_RS16625 PF00005 ABC transporter CP439_RS16635 PF00115 Cytochrome C and Quinol oxidase polypeptide I CP439_RS16650 PF00107 Zinc-binding dehydrogenase CP439_RS16650 PF08240 Alcohol dehydrogenase GroES-like domain CP439_RS16665 PF00268 Ribonucleotide reductase, small chain CP439_RS16670 PF00743 Flavin-binding monooxygenase-like CP439_RS16675 PF00440 Bacterial regulatory proteins, tetR family CP439_RS16680 PF08343 Ribonucleotide reductase N-terminal CP439_RS16680 PF00317 Ribonucleotide reductase, all-alpha domain CP439_RS16680 PF02867 Ribonucleotide reductase, barrel domain CP439_RS16685 PF07972 NrdI Flavodoxin like CP439_RS16700 PF03358 NADPH-dependent FMN reductase CP439_RS16710 PF11799 impB/mucB/samB family C-terminal domain CP439_RS16710 PF00817 impB/mucB/samB family CP439_RS16715 PF00106 short chain dehydrogenase CP439_RS16725 PF00067 Cytochrome P450 CP439_RS16735 PF07729 FCD domain CP439_RS16735 PF00392 Bacterial regulatory proteins, gntR family CP439_RS16740 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CP439_RS16740 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CP439_RS16740 PF02770 Acyl-CoA dehydrogenase, middle domain CP439_RS16745 PF04675 DNA ligase N terminus CP439_RS16745 PF01068 ATP dependent DNA ligase domain CP439_RS16745 PF04679 ATP dependent DNA ligase C terminal region CP439_RS16750 PF13722 5TM C-terminal transporter carbon starvation CstA CP439_RS16750 PF02554 Carbon starvation protein CstA CP439_RS16760 PF00893 Small Multidrug Resistance protein CP439_RS16770 PF05305 Protein of unknown function (DUF732) CP439_RS16780 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CP439_RS16780 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CP439_RS16780 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CP439_RS16780 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CP439_RS16785 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CP439_RS16790 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CP439_RS16805 PF04343 Protein of unknown function, DUF488 CP439_RS16835 PF00296 Luciferase-like monooxygenase CP439_RS16840 PF13191 AAA ATPase domain CP439_RS16840 PF00069 Protein kinase domain CP439_RS16850 PF12833 Helix-turn-helix domain CP439_RS16850 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term CP439_RS16855 PF00743 Flavin-binding monooxygenase-like CP439_RS16860 PF07859 alpha/beta hydrolase fold CP439_RS16865 PF00106 short chain dehydrogenase CP439_RS16870 PF08240 Alcohol dehydrogenase GroES-like domain CP439_RS16870 PF00107 Zinc-binding dehydrogenase CP439_RS16875 PF06974 Protein of unknown function (DUF1298) CP439_RS16875 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain CP439_RS16880 PF06974 Protein of unknown function (DUF1298) CP439_RS16880 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain CP439_RS16885 PF00501 AMP-binding enzyme CP439_RS16885 PF13193 AMP-binding enzyme C-terminal domain CP439_RS16910 PF05661 Protein of unknown function (DUF808) CP439_RS16920 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CP439_RS16925 PF01638 HxlR-like helix-turn-helix CP439_RS16935 PF00934 PE family CP439_RS16935 PF07859 alpha/beta hydrolase fold CP439_RS16945 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system CP439_RS16960 PF01668 SmpB protein CP439_RS16965 PF18075 FtsX extracellular domain CP439_RS16965 PF02687 FtsX-like permease family CP439_RS16970 PF00005 ABC transporter CP439_RS16980 PF00924 Mechanosensitive ion channel CP439_RS16985 PF03462 PCRF domain CP439_RS16985 PF00472 RF-1 domain CP439_RS16990 PF07992 Pyridine nucleotide-disulphide oxidoreductase CP439_RS16995 PF01565 FAD binding domain CP439_RS16995 PF02913 FAD linked oxidases, C-terminal domain CP439_RS17005 PF04055 Radical SAM superfamily CP439_RS17005 PF06463 Molybdenum Cofactor Synthesis C CP439_RS17010 PF01329 Pterin 4 alpha carbinolamine dehydratase CP439_RS17015 PF01967 MoaC family CP439_RS17020 PF02597 ThiS family CP439_RS17040 PF00872 Transposase, Mutator family CP439_RS17050 PF00581 Rhodanese-like domain CP439_RS17055 PF07210 Protein of unknown function (DUF1416) CP439_RS17060 PF02391 MoaE protein CP439_RS17070 PF00067 Cytochrome P450 CP439_RS17090 PF00486 Transcriptional regulatory protein, C terminal CP439_RS17090 PF03704 Bacterial transcriptional activator domain CP439_RS17095 PF12484 Polymorphic PE/PPE proteins C terminal CP439_RS17095 PF00823 PPE family CP439_RS17120 PF12900 Pyridoxamine 5'-phosphate oxidase CP439_RS17125 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain CP439_RS17125 PF06974 Protein of unknown function (DUF1298) CP439_RS17135 PF07730 Histidine kinase CP439_RS17135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CP439_RS17135 PF13185 GAF domain CP439_RS17140 PF00072 Response regulator receiver domain CP439_RS17140 PF00196 Bacterial regulatory proteins, luxR family CP439_RS17145 PF00582 Universal stress protein family CP439_RS17160 PF00823 PPE family CP439_RS17165 PF12484 Polymorphic PE/PPE proteins C terminal CP439_RS17165 PF00823 PPE family CP439_RS17175 PF00459 Inositol monophosphatase family CP439_RS17190 PF02770 Acyl-CoA dehydrogenase, middle domain CP439_RS17190 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CP439_RS17190 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CP439_RS17195 PF14765 Polyketide synthase dehydratase CP439_RS17195 PF00550 Phosphopantetheine attachment site CP439_RS17195 PF08659 KR domain CP439_RS17195 PF08240 Alcohol dehydrogenase GroES-like domain CP439_RS17195 PF00698 Acyl transferase domain CP439_RS17210 PF00823 PPE family CP439_RS17210 PF01469 Pentapeptide repeats (8 copies) CP439_RS17215 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CP439_RS17220 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CP439_RS17225 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CP439_RS17230 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CP439_RS17240 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CP439_RS17240 PF10531 SLBB domain CP439_RS17240 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CP439_RS17245 PF00384 Molybdopterin oxidoreductase CP439_RS17245 PF01568 Molydopterin dinucleotide binding domain CP439_RS17245 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CP439_RS17250 PF00146 NADH dehydrogenase CP439_RS17255 PF12838 4Fe-4S dicluster domain CP439_RS17260 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CP439_RS17265 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CP439_RS17270 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CP439_RS17270 PF00361 Proton-conducting membrane transporter CP439_RS17275 PF00361 Proton-conducting membrane transporter CP439_RS17280 PF00361 Proton-conducting membrane transporter CP439_RS17285 PF00823 PPE family CP439_RS17285 PF01469 Pentapeptide repeats (8 copies) CP439_RS17295 PF00355 Rieske [2Fe-2S] domain CP439_RS17295 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CP439_RS17305 PF01882 Protein of unknown function DUF58 CP439_RS17310 PF17863 AAA lid domain CP439_RS17310 PF07726 ATPase family associated with various cellular activities (AAA) CP439_RS17330 PF01636 Phosphotransferase enzyme family CP439_RS17340 PF01593 Flavin containing amine oxidoreductase CP439_RS17355 PF00440 Bacterial regulatory proteins, tetR family CP439_RS17355 PF16859 Tetracyclin repressor-like, C-terminal domain CP439_RS17365 PF01425 Amidase CP439_RS17375 PF12697 Alpha/beta hydrolase family CP439_RS17380 PF04075 F420H(2)-dependent quinone reductase CP439_RS17395 PF13635 Domain of unknown function (DUF4143) CP439_RS17395 PF13173 AAA domain CP439_RS17400 PF01850 PIN domain CP439_RS17405 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system CP439_RS17410 PF05973 Phage derived protein Gp49-like (DUF891) CP439_RS17415 PF13744 Helix-turn-helix domain CP439_RS17430 PF09722 Protein of unknown function (DUF2384) CP439_RS17435 PF08808 RES domain CP439_RS17455 PF00665 Integrase core domain CP439_RS17455 PF13936 Helix-turn-helix domain CP439_RS17480 PF03699 Uncharacterised protein family (UPF0182) CP439_RS17505 PF03109 ABC1 family CP439_RS17510 PF02467 Transcription factor WhiB CP439_RS17510 PF02178 AT hook motif CP439_RS17515 PF00580 UvrD/REP helicase N-terminal domain CP439_RS17515 PF13361 UvrD-like helicase C-terminal domain CP439_RS17515 PF00570 HRDC domain CP439_RS17520 PF00462 Glutaredoxin CP439_RS17525 PF00293 NUDIX domain CP439_RS17525 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain CP439_RS17525 PF09297 NADH pyrophosphatase zinc ribbon domain CP439_RS17535 PF13361 UvrD-like helicase C-terminal domain CP439_RS17535 PF00580 UvrD/REP helicase N-terminal domain CP439_RS17550 PF12697 Alpha/beta hydrolase family CP439_RS17555 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CP439_RS17565 PF00899 ThiF family CP439_RS17565 PF00581 Rhodanese-like domain CP439_RS17595 PF00270 DEAD/DEAH box helicase CP439_RS17595 PF00271 Helicase conserved C-terminal domain CP439_RS17605 PF13614 AAA domain CP439_RS17610 PF00300 Histidine phosphatase superfamily (branch 1) CP439_RS17615 PF00425 chorismate binding enzyme CP439_RS17630 PF00781 Diacylglycerol kinase catalytic domain CP439_RS17635 PF02467 Transcription factor WhiB CP439_RS17640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CP439_RS17640 PF12282 Signal transduction histidine kinase CP439_RS17640 PF07568 Histidine kinase CP439_RS17645 PF00364 Biotin-requiring enzyme CP439_RS17655 PF13490 Putative zinc-finger CP439_RS17665 PF04542 Sigma-70 region 2 CP439_RS17665 PF08281 Sigma-70, region 4 CP439_RS17680 PF04073 Aminoacyl-tRNA editing domain CP439_RS17690 PF02586 SOS response associated peptidase (SRAP) CP439_RS17695 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CP439_RS17700 PF03193 RsgA GTPase CP439_RS17705 PF00487 Fatty acid desaturase CP439_RS17710 PF00111 2Fe-2S iron-sulfur cluster binding domain CP439_RS17710 PF00970 Oxidoreductase FAD-binding domain CP439_RS17710 PF00175 Oxidoreductase NAD-binding domain CP439_RS17720 PF03976 Polyphosphate kinase 2 (PPK2) CP439_RS17725 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain CP439_RS17725 PF06974 Protein of unknown function (DUF1298) CP439_RS17730 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain CP439_RS17740 PF02254 TrkA-N domain CP439_RS17740 PF00999 Sodium/hydrogen exchanger family CP439_RS17750 PF07298 NnrU protein CP439_RS17755 PF00027 Cyclic nucleotide-binding domain CP439_RS17755 PF01734 Patatin-like phospholipase CP439_RS17760 PF07516 SecA Wing and Scaffold domain CP439_RS17760 PF01043 SecA preprotein cross-linking domain CP439_RS17760 PF07517 SecA DEAD-like domain CP439_RS17765 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus CP439_RS17765 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CP439_RS17780 PF10646 Sporulation and spore germination CP439_RS17780 PF10647 Lipoprotein LpqB beta-propeller domain CP439_RS17785 PF00672 HAMP domain CP439_RS17785 PF00512 His Kinase A (phospho-acceptor) domain CP439_RS17785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CP439_RS17790 PF00486 Transcriptional regulatory protein, C terminal CP439_RS17790 PF00072 Response regulator receiver domain CP439_RS17795 PF02223 Thymidylate kinase CP439_RS17800 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CP439_RS17800 PF05221 S-adenosyl-L-homocysteine hydrolase CP439_RS17810 PF00301 Rubredoxin CP439_RS17815 PF00301 Rubredoxin CP439_RS17820 PF00487 Fatty acid desaturase CP439_RS17825 PF13520 Amino acid permease CP439_RS17835 PF01238 Phosphomannose isomerase type I CP439_RS17845 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CP439_RS17845 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CP439_RS17845 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CP439_RS17845 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CP439_RS17860 PF02467 Transcription factor WhiB CP439_RS17870 PF01933 Uncharacterised protein family UPF0052 CP439_RS17875 PF00881 Nitroreductase family CP439_RS17875 PF01996 F420-0:Gamma-glutamyl ligase CP439_RS17885 PF02384 N-6 DNA Methylase CP439_RS17890 PF00483 Nucleotidyl transferase CP439_RS17900 PF04321 RmlD substrate binding domain CP439_RS17905 PF03816 Cell envelope-related transcriptional attenuator domain CP439_RS17905 PF13399 LytR cell envelope-related transcriptional attenuator CP439_RS17915 PF07371 Protein of unknown function (DUF1490) CP439_RS17930 PF02515 CoA-transferase family III CP439_RS17935 PF00916 Sulfate permease family CP439_RS17935 PF01740 STAS domain CP439_RS17940 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CP439_RS17940 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CP439_RS17940 PF02770 Acyl-CoA dehydrogenase, middle domain CP439_RS17945 PF00731 AIR carboxylase CP439_RS17950 PF02222 ATP-grasp domain CP439_RS17950 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CP439_RS17965 PF08279 HTH domain CP439_RS17965 PF02237 Biotin protein ligase C terminal domain CP439_RS17965 PF03099 Biotin/lipoate A/B protein ligase family CP439_RS17970 PF01039 Carboxyl transferase domain CP439_RS17980 PF02545 Maf-like protein CP439_RS17985 PF00581 Rhodanese-like domain CP439_RS17990 PF02657 Fe-S metabolism associated domain CP439_RS17995 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CP439_RS17995 PF00364 Biotin-requiring enzyme CP439_RS17995 PF00289 Biotin carboxylase, N-terminal domain CP439_RS17995 PF02785 Biotin carboxylase C-terminal domain CP439_RS18000 PF04542 Sigma-70 region 2 CP439_RS18000 PF04539 Sigma-70 region 3 CP439_RS18000 PF04545 Sigma-70, region 4 CP439_RS18020 PF00202 Aminotransferase class-III CP439_RS18025 PF01037 Lrp/AsnC ligand binding domain CP439_RS18030 PF07063 Domain of unknown function (DUF1338) CP439_RS18035 PF00171 Aldehyde dehydrogenase family CP439_RS18045 PF00440 Bacterial regulatory proteins, tetR family CP439_RS18050 PF00270 DEAD/DEAH box helicase CP439_RS18050 PF08494 DEAD/H associated CP439_RS18050 PF00271 Helicase conserved C-terminal domain CP439_RS18055 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CP439_RS18055 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CP439_RS18065 PF00884 Sulfatase CP439_RS18065 PF16347 Domain of unknown function (DUF4976) CP439_RS18065 PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain CP439_RS18065 PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain CP439_RS18065 PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain CP439_RS18070 PF00849 RNA pseudouridylate synthase CP439_RS18075 PF01895 PhoU domain CP439_RS18080 PF01266 FAD dependent oxidoreductase CP439_RS18080 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CP439_RS18085 PF07992 Pyridine nucleotide-disulphide oxidoreductase CP439_RS18085 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CP439_RS18095 PF01546 Peptidase family M20/M25/M40 CP439_RS18095 PF04107 Glutamate-cysteine ligase family 2(GCS2) CP439_RS18105 PF01048 Phosphorylase superfamily CP439_RS18110 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CP439_RS18110 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CP439_RS18110 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CP439_RS18110 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CP439_RS18120 PF04185 Phosphoesterase family CP439_RS18130 PF00561 alpha/beta hydrolase fold CP439_RS18145 PF00962 Adenosine/AMP deaminase CP439_RS18150 PF00591 Glycosyl transferase family, a/b domain CP439_RS18150 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CP439_RS18150 PF02885 Glycosyl transferase family, helical bundle domain CP439_RS18155 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CP439_RS18160 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CP439_RS18170 PF00890 FAD binding domain CP439_RS18170 PF02910 Fumarate reductase flavoprotein C-term CP439_RS18175 PF13085 2Fe-2S iron-sulfur cluster binding domain CP439_RS18180 PF01850 PIN domain CP439_RS18195 PF02391 MoaE protein CP439_RS18200 PF01967 MoaC family CP439_RS18215 PF01548 Transposase CP439_RS18215 PF02371 Transposase IS116/IS110/IS902 family CP439_RS18220 PF12680 SnoaL-like domain CP439_RS18220 PF08281 Sigma-70, region 4 CP439_RS18220 PF04542 Sigma-70 region 2 CP439_RS18225 PF00202 Aminotransferase class-III CP439_RS18230 PF00768 D-alanyl-D-alanine carboxypeptidase CP439_RS18235 PF00083 Sugar (and other) transporter CP439_RS18240 PF01979 Amidohydrolase family CP439_RS18255 PF13411 MerR HTH family regulatory protein CP439_RS18260 PF03631 Virulence factor BrkB CP439_RS18265 PF00579 tRNA synthetases class I (W and Y) CP439_RS18275 PF00180 Isocitrate/isopropylmalate dehydrogenase CP439_RS18280 PF01053 Cys/Met metabolism PLP-dependent enzyme CP439_RS18285 PF00561 alpha/beta hydrolase fold CP439_RS18290 PF08241 Methyltransferase domain CP439_RS18305 PF00934 PE family CP439_RS18315 PF00823 PPE family CP439_RS18315 PF01469 Pentapeptide repeats (8 copies) CP439_RS18315 PF00823 PPE family CP439_RS18315 PF01469 Pentapeptide repeats (8 copies) CP439_RS18345 PF00823 PPE family CP439_RS18345 PF00823 PPE family CP439_RS18345 PF01469 Pentapeptide repeats (8 copies) CP439_RS18345 PF00823 PPE family CP439_RS18345 PF01469 Pentapeptide repeats (8 copies) CP439_RS18345 PF01469 Pentapeptide repeats (8 copies) CP439_RS18355 PF08031 Berberine and berberine like CP439_RS18355 PF01565 FAD binding domain CP439_RS18370 PF05305 Protein of unknown function (DUF732) CP439_RS18380 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CP439_RS18380 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CP439_RS18385 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system CP439_RS18390 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system CP439_RS18395 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CP439_RS18400 PF01061 ABC-2 type transporter CP439_RS18400 PF00498 FHA domain CP439_RS18400 PF00005 ABC transporter CP439_RS18405 PF13599 Pentapeptide repeats (9 copies) CP439_RS18420 PF03259 Roadblock/LC7 domain CP439_RS18430 PF00588 SpoU rRNA Methylase family CP439_RS18435 PF00934 PE family CP439_RS18450 PF02811 PHP domain CP439_RS18450 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CP439_RS18450 PF07733 Bacterial DNA polymerase III alpha NTPase domain CP439_RS18450 PF14579 Helix-hairpin-helix motif CP439_RS18455 PF06974 Protein of unknown function (DUF1298) CP439_RS18455 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain CP439_RS18460 PF02358 Trehalose-phosphatase CP439_RS18470 PF00378 Enoyl-CoA hydratase/isomerase CP439_RS18480 PF01425 Amidase CP439_RS18490 PF13243 Squalene-hopene cyclase C-terminal domain CP439_RS18490 PF00432 Prenyltransferase and squalene oxidase repeat CP439_RS18500 PF02780 Transketolase, C-terminal domain CP439_RS18500 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CP439_RS18500 PF02779 Transketolase, pyrimidine binding domain CP439_RS18505 PF02780 Transketolase, C-terminal domain CP439_RS18505 PF02779 Transketolase, pyrimidine binding domain CP439_RS18505 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CP439_RS18515 PF02401 LytB protein CP439_RS18520 PF00348 Polyprenyl synthetase CP439_RS18525 PF01850 PIN domain CP439_RS18530 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system CP439_RS18540 PF00934 PE family CP439_RS18545 PF01575 MaoC like domain CP439_RS18550 PF00934 PE family CP439_RS18550 PF00300 Histidine phosphatase superfamily (branch 1) CP439_RS18555 PF00106 short chain dehydrogenase CP439_RS18565 PF01156 Inosine-uridine preferring nucleoside hydrolase CP439_RS18585 PF02540 NAD synthase CP439_RS18585 PF00958 GMP synthase C terminal domain CP439_RS18585 PF00117 Glutamine amidotransferase class-I CP439_RS18595 PF00348 Polyprenyl synthetase CP439_RS18600 PF04072 Leucine carboxyl methyltransferase CP439_RS18605 PF13419 Haloacid dehalogenase-like hydrolase CP439_RS18610 PF03632 Glycosyl hydrolase family 65 central catalytic domain CP439_RS18610 PF03636 Glycosyl hydrolase family 65, N-terminal domain CP439_RS18610 PF03633 Glycosyl hydrolase family 65, C-terminal domain CP439_RS18620 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CP439_RS18625 PF13454 FAD-NAD(P)-binding CP439_RS18630 PF18216 N-formyltransferase dimerization C-terminal domain CP439_RS18630 PF00551 Formyl transferase CP439_RS18635 PF00440 Bacterial regulatory proteins, tetR family CP439_RS18640 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CP439_RS18645 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system CP439_RS18650 PF01850 PIN domain CP439_RS18655 PF05199 GMC oxidoreductase CP439_RS18660 PF00478 IMP dehydrogenase / GMP reductase domain CP439_RS18665 PF00571 CBS domain CP439_RS18665 PF00478 IMP dehydrogenase / GMP reductase domain CP439_RS18670 PF17252 Family of unknown function (DUF5319) CP439_RS18675 PF16751 Anti-sigma-D factor RsdA to sigma factor binding region CP439_RS18680 PF04542 Sigma-70 region 2 CP439_RS18680 PF08281 Sigma-70, region 4 CP439_RS18690 PF02467 Transcription factor WhiB CP439_RS18695 PF00118 TCP-1/cpn60 chaperonin family CP439_RS18700 PF00166 Chaperonin 10 Kd subunit CP439_RS18705 PF00814 Glycoprotease family CP439_RS18710 PF00583 Acetyltransferase (GNAT) family CP439_RS18715 PF00814 Glycoprotease family CP439_RS18720 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CP439_RS18725 PF00842 Alanine racemase, C-terminal domain CP439_RS18725 PF01168 Alanine racemase, N-terminal domain CP439_RS18740 PF00823 PPE family CP439_RS18745 PF00823 PPE family CP439_RS18750 PF01695 IstB-like ATP binding protein CP439_RS18755 PF00665 Integrase core domain CP439_RS18770 PF00823 PPE family CP439_RS18785 PF00282 Pyridoxal-dependent decarboxylase conserved domain CP439_RS18790 PF01256 Carbohydrate kinase CP439_RS18790 PF03853 YjeF-related protein N-terminus CP439_RS18805 PF01380 SIS domain CP439_RS18830 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CP439_RS18830 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CP439_RS18830 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CP439_RS18830 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CP439_RS18835 PF00380 Ribosomal protein S9/S16 CP439_RS18840 PF00572 Ribosomal protein L13 CP439_RS18845 PF06013 Proteins of 100 residues with WXG CP439_RS18850 PF06013 Proteins of 100 residues with WXG CP439_RS18860 PF01580 FtsK/SpoIIIE family CP439_RS18865 PF08817 WXG100 protein secretion system (Wss), protein YukD CP439_RS18870 PF00082 Subtilase family CP439_RS18875 PF05108 Type VII secretion system ESX-1, transport TM domain B CP439_RS18880 PF01083 Cutinase CP439_RS18885 PF01083 Cutinase CP439_RS18905 PF01416 tRNA pseudouridine synthase CP439_RS18910 PF01196 Ribosomal protein L17 CP439_RS18915 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CP439_RS18915 PF01000 RNA polymerase Rpb3/RpoA insert domain CP439_RS18915 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CP439_RS18920 PF01479 S4 domain CP439_RS18920 PF00163 Ribosomal protein S4/S9 N-terminal domain CP439_RS18925 PF00411 Ribosomal protein S11 CP439_RS18930 PF00416 Ribosomal protein S13/S18 CP439_RS18935 PF00444 Ribosomal protein L36 CP439_RS18940 PF01176 Translation initiation factor 1A / IF-1 CP439_RS18950 PF16363 GDP-mannose 4,6 dehydratase CP439_RS18955 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CP439_RS18975 PF16363 GDP-mannose 4,6 dehydratase CP439_RS18980 PF00682 HMGL-like CP439_RS18985 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CP439_RS18985 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CP439_RS18985 PF00205 Thiamine pyrophosphate enzyme, central domain CP439_RS19010 PF00083 Sugar (and other) transporter CP439_RS19015 PF00934 PE family CP439_RS19020 PF12484 Polymorphic PE/PPE proteins C terminal CP439_RS19020 PF00823 PPE family CP439_RS19025 PF01734 Patatin-like phospholipase CP439_RS19025 PF11856 Protein of unknown function (DUF3376) CP439_RS19030 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain CP439_RS19030 PF06974 Protein of unknown function (DUF1298) CP439_RS19050 PF03816 Cell envelope-related transcriptional attenuator domain CP439_RS19050 PF13399 LytR cell envelope-related transcriptional attenuator CP439_RS19065 PF07681 DoxX CP439_RS19070 PF07859 alpha/beta hydrolase fold CP439_RS19075 PF03551 Transcriptional regulator PadR-like family CP439_RS19085 PF00982 Glycosyltransferase family 20 CP439_RS19110 PF02470 MlaD protein CP439_RS19135 PF02405 Permease MlaE CP439_RS19140 PF02405 Permease MlaE CP439_RS19155 PF02770 Acyl-CoA dehydrogenase, middle domain CP439_RS19155 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CP439_RS19155 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CP439_RS19160 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CP439_RS19160 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CP439_RS19165 PF00501 AMP-binding enzyme CP439_RS19165 PF13193 AMP-binding enzyme C-terminal domain CP439_RS19170 PF00934 PE family CP439_RS19180 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CP439_RS19180 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CP439_RS19195 PF00501 AMP-binding enzyme CP439_RS19195 PF13193 AMP-binding enzyme C-terminal domain CP439_RS19200 PF00934 PE family CP439_RS19210 PF00501 AMP-binding enzyme CP439_RS19210 PF13193 AMP-binding enzyme C-terminal domain CP439_RS19215 PF00378 Enoyl-CoA hydratase/isomerase CP439_RS19225 PF00067 Cytochrome P450 CP439_RS19235 PF00296 Luciferase-like monooxygenase CP439_RS19245 PF00108 Thiolase, N-terminal domain CP439_RS19245 PF02803 Thiolase, C-terminal domain CP439_RS19250 PF00814 Glycoprotease family CP439_RS19260 PF00132 Bacterial transferase hexapeptide (six repeats) CP439_RS19265 PF00355 Rieske [2Fe-2S] domain CP439_RS19305 PF00823 PPE family CP439_RS19305 PF12484 Polymorphic PE/PPE proteins C terminal CP439_RS19310 PF00823 PPE family CP439_RS19310 PF01469 Pentapeptide repeats (8 copies) CP439_RS19315 PF00682 HMGL-like CP439_RS19315 PF07836 DmpG-like communication domain CP439_RS19320 PF01118 Semialdehyde dehydrogenase, NAD binding domain CP439_RS19320 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation CP439_RS19325 PF01557 Fumarylacetoacetate (FAA) hydrolase family CP439_RS19330 PF00890 FAD binding domain CP439_RS19335 PF01575 MaoC like domain CP439_RS19340 PF08237 PE-PPE domain CP439_RS19340 PF00823 PPE family CP439_RS19355 PF13452 N-terminal half of MaoC dehydratase CP439_RS19360 PF02770 Acyl-CoA dehydrogenase, middle domain CP439_RS19360 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CP439_RS19360 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CP439_RS19365 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CP439_RS19365 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CP439_RS19370 PF00067 Cytochrome P450 CP439_RS19375 PF00108 Thiolase, N-terminal domain CP439_RS19375 PF02803 Thiolase, C-terminal domain CP439_RS19380 PF04075 F420H(2)-dependent quinone reductase CP439_RS19385 PF00106 short chain dehydrogenase CP439_RS19400 PF00378 Enoyl-CoA hydratase/isomerase CP439_RS19405 PF01144 Coenzyme A transferase CP439_RS19415 PF03060 Nitronate monooxygenase CP439_RS19420 PF00970 Oxidoreductase FAD-binding domain CP439_RS19420 PF00111 2Fe-2S iron-sulfur cluster binding domain CP439_RS19420 PF00175 Oxidoreductase NAD-binding domain CP439_RS19430 PF02803 Thiolase, C-terminal domain CP439_RS19430 PF00108 Thiolase, N-terminal domain CP439_RS19435 PF00440 Bacterial regulatory proteins, tetR family CP439_RS19435 PF17932 Tetracyclin repressor-like, C-terminal domain CP439_RS19440 PF00823 PPE family CP439_RS19440 PF01469 Pentapeptide repeats (8 copies) CP439_RS19450 PF02770 Acyl-CoA dehydrogenase, middle domain CP439_RS19450 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CP439_RS19450 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CP439_RS19455 PF13193 AMP-binding enzyme C-terminal domain CP439_RS19455 PF00501 AMP-binding enzyme CP439_RS19460 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CP439_RS19460 PF02770 Acyl-CoA dehydrogenase, middle domain CP439_RS19460 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CP439_RS19465 PF02770 Acyl-CoA dehydrogenase, middle domain CP439_RS19465 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CP439_RS19465 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CP439_RS19470 PF02770 Acyl-CoA dehydrogenase, middle domain CP439_RS19470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CP439_RS19470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CP439_RS19475 PF00155 Aminotransferase class I and II CP439_RS19480 PF00797 N-acetyltransferase CP439_RS19495 PF01613 Flavin reductase like domain CP439_RS19500 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CP439_RS19505 PF00561 alpha/beta hydrolase fold CP439_RS19510 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CP439_RS19515 PF00111 2Fe-2S iron-sulfur cluster binding domain CP439_RS19515 PF00970 Oxidoreductase FAD-binding domain CP439_RS19515 PF00175 Oxidoreductase NAD-binding domain CP439_RS19525 PF02770 Acyl-CoA dehydrogenase, middle domain CP439_RS19525 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CP439_RS19525 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CP439_RS19530 PF17925 Tetracyclin repressor-like, C-terminal domain CP439_RS19530 PF00440 Bacterial regulatory proteins, tetR family CP439_RS19535 PF00356 Bacterial regulatory proteins, lacI family CP439_RS19555 PF00588 SpoU rRNA Methylase family CP439_RS19555 PF08032 RNA 2'-O ribose methyltransferase substrate binding CP439_RS19560 PF09190 DALR domain CP439_RS19560 PF01406 tRNA synthetases class I (C) catalytic domain CP439_RS19565 PF02542 YgbB family CP439_RS19570 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CP439_RS19575 PF02559 CarD-like/TRCF domain CP439_RS19585 PF18073 Rubredoxin metal binding domain CP439_RS19590 PF10635 DisA bacterial checkpoint controller linker region CP439_RS19590 PF02457 DisA bacterial checkpoint controller nucleotide-binding CP439_RS19600 PF00484 Carbonic anhydrase CP439_RS19605 PF00730 HhH-GPD superfamily base excision DNA repair protein CP439_RS19605 PF00633 Helix-hairpin-helix motif CP439_RS19610 PF00934 PE family CP439_RS19620 PF03992 Antibiotic biosynthesis monooxygenase CP439_RS19640 PF00004 ATPase family associated with various cellular activities (AAA) CP439_RS19640 PF17871 AAA lid domain CP439_RS19640 PF02861 Clp amino terminal domain, pathogenicity island component CP439_RS19640 PF10431 C-terminal, D2-small domain, of ClpB protein CP439_RS19640 PF07724 AAA domain (Cdc48 subfamily) CP439_RS19645 PF11774 Lsr2 CP439_RS19650 PF00152 tRNA synthetases class II (D, K and N) CP439_RS19650 PF01336 OB-fold nucleic acid binding domain CP439_RS19655 PF03309 Type III pantothenate kinase CP439_RS19660 PF02261 Aspartate decarboxylase CP439_RS19665 PF02569 Pantoate-beta-alanine ligase CP439_RS19685 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CP439_RS19690 PF02152 Dihydroneopterin aldolase CP439_RS19695 PF00809 Pterin binding enzyme CP439_RS19700 PF01227 GTP cyclohydrolase I CP439_RS19705 PF00004 ATPase family associated with various cellular activities (AAA) CP439_RS19705 PF01434 Peptidase family M41 CP439_RS19705 PF17862 AAA+ lid domain CP439_RS19735 PF10824 Excreted virulence factor EspC, type VII ESX diderm CP439_RS19750 PF00561 alpha/beta hydrolase fold CP439_RS19755 PF00296 Luciferase-like monooxygenase CP439_RS19760 PF06013 Proteins of 100 residues with WXG CP439_RS19765 PF06013 Proteins of 100 residues with WXG CP439_RS19770 PF00823 PPE family CP439_RS19770 PF12484 Polymorphic PE/PPE proteins C terminal CP439_RS19775 PF00934 PE family CP439_RS19785 PF00156 Phosphoribosyl transferase domain CP439_RS19790 PF09179 TilS substrate binding domain CP439_RS19790 PF01171 PP-loop family CP439_RS19800 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CP439_RS19805 PF00719 Inorganic pyrophosphatase CP439_RS19830 PF05721 Phytanoyl-CoA dioxygenase (PhyH) CP439_RS19835 PF16363 GDP-mannose 4,6 dehydratase CP439_RS19850 PF01695 IstB-like ATP binding protein CP439_RS19860 PF00872 Transposase, Mutator family CP439_RS19865 PF02661 Fic/DOC family CP439_RS19885 PF09115 DNA polymerase III, delta subunit, C terminal CP439_RS19890 PF00211 Adenylate and Guanylate cyclase catalytic domain CP439_RS19890 PF00672 HAMP domain CP439_RS19895 PF01131 DNA topoisomerase CP439_RS19895 PF01751 Toprim domain CP439_RS19895 PF13368 Topoisomerase C-terminal repeat CP439_RS19905 PF00313 'Cold-shock' DNA-binding domain CP439_RS19910 PF09369 Domain of unknown function (DUF1998) CP439_RS19910 PF00271 Helicase conserved C-terminal domain CP439_RS19910 PF00270 DEAD/DEAH box helicase CP439_RS19915 PF00934 PE family CP439_RS19930 PF00934 PE family CP439_RS19965 PF00437 Type II/IV secretion system protein CP439_RS19995 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CP439_RS19995 PF00005 ABC transporter CP439_RS20000 PF12911 N-terminal TM domain of oligopeptide transport permease C CP439_RS20000 PF00528 Binding-protein-dependent transport system inner membrane component CP439_RS20005 PF00528 Binding-protein-dependent transport system inner membrane component CP439_RS20020 PF00501 AMP-binding enzyme CP439_RS20020 PF16177 Acetyl-coenzyme A synthetase N-terminus CP439_RS20020 PF13193 AMP-binding enzyme C-terminal domain CP439_RS20040 PF02674 Colicin V production protein CP439_RS20055 PF10576 Iron-sulfur binding domain of endonuclease III CP439_RS20055 PF00730 HhH-GPD superfamily base excision DNA repair protein CP439_RS20055 PF00633 Helix-hairpin-helix motif CP439_RS20065 PF00027 Cyclic nucleotide-binding domain CP439_RS20065 PF13545 Crp-like helix-turn-helix domain CP439_RS20070 PF00753 Metallo-beta-lactamase superfamily CP439_RS20070 PF16123 Hydroxyacylglutathione hydrolase C-terminus CP439_RS20085 PF02374 Anion-transporting ATPase CP439_RS20090 PF02374 Anion-transporting ATPase CP439_RS20095 PF02467 Transcription factor WhiB CP439_RS20100 PF00912 Transglycosylase CP439_RS20100 PF00905 Penicillin binding protein transpeptidase domain CP439_RS20105 PF00149 Calcineurin-like phosphoesterase CP439_RS20110 PF00291 Pyridoxal-phosphate dependent enzyme CP439_RS20125 PF00067 Cytochrome P450 CP439_RS20135 PF01740 STAS domain CP439_RS20155 PF14258 Domain of unknown function (DUF4350) CP439_RS20160 PF07726 ATPase family associated with various cellular activities (AAA) CP439_RS20160 PF17863 AAA lid domain CP439_RS20185 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CP439_RS20185 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CP439_RS20190 PF01850 PIN domain CP439_RS20205 PF13847 Methyltransferase domain CP439_RS20210 PF00266 Aminotransferase class-V CP439_RS20215 PF10017 Histidine-specific methyltransferase, SAM-dependent CP439_RS20225 PF12867 DinB superfamily CP439_RS20225 PF03781 Sulfatase-modifying factor enzyme 1 CP439_RS20230 PF04107 Glutamate-cysteine ligase family 2(GCS2) CP439_RS20250 PF13810 Domain of unknown function (DUF4185) CP439_RS20255 PF01118 Semialdehyde dehydrogenase, NAD binding domain CP439_RS20255 PF02774 Semialdehyde dehydrogenase, dimerisation domain CP439_RS20260 PF00696 Amino acid kinase family CP439_RS20260 PF01842 ACT domain CP439_RS20260 PF13840 ACT domain CP439_RS20265 PF00682 HMGL-like CP439_RS20265 PF08502 LeuA allosteric (dimerisation) domain CP439_RS20275 PF08245 Mur ligase middle domain CP439_RS20290 PF13662 Toprim domain CP439_RS20290 PF02132 RecR protein CP439_RS20295 PF02575 YbaB/EbfC DNA-binding family CP439_RS20300 PF01520 N-acetylmuramoyl-L-alanine amidase CP439_RS20320 PF12169 DNA polymerase III subunits gamma and tau domain III CP439_RS20325 PF12897 Alanine-glyoxylate amino-transferase CP439_RS20355 PF00107 Zinc-binding dehydrogenase CP439_RS20355 PF08240 Alcohol dehydrogenase GroES-like domain CP439_RS20360 PF01593 Flavin containing amine oxidoreductase CP439_RS20365 PF07690 Major Facilitator Superfamily CP439_RS20370 PF13649 Methyltransferase domain CP439_RS20375 PF04679 ATP dependent DNA ligase C terminal region CP439_RS20375 PF01068 ATP dependent DNA ligase domain CP439_RS20375 PF13298 DNA polymerase Ligase (LigD) CP439_RS20380 PF04679 ATP dependent DNA ligase C terminal region CP439_RS20380 PF01068 ATP dependent DNA ligase domain CP439_RS20395 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain CP439_RS20395 PF06974 Protein of unknown function (DUF1298) CP439_RS20420 PF06974 Protein of unknown function (DUF1298) CP439_RS20420 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain CP439_RS20425 PF00743 Flavin-binding monooxygenase-like CP439_RS20430 PF00743 Flavin-binding monooxygenase-like CP439_RS20440 PF01022 Bacterial regulatory protein, arsR family CP439_RS20450 PF00934 PE family CP439_RS20470 PF12728 Helix-turn-helix domain CP439_RS20480 PF00589 Phage integrase family CP439_RS20480 PF02899 Phage integrase, N-terminal SAM-like domain CP439_RS20490 PF14437 MafB19-like deaminase CP439_RS20500 PF02153 Prephenate dehydrogenase CP439_RS20510 PF00528 Binding-protein-dependent transport system inner membrane component CP439_RS20515 PF00528 Binding-protein-dependent transport system inner membrane component CP439_RS20520 PF00571 CBS domain CP439_RS20520 PF00005 ABC transporter CP439_RS20530 PF06305 Lipopolysaccharide assembly protein A domain CP439_RS20540 PF00753 Metallo-beta-lactamase superfamily CP439_RS20540 PF14864 Alkyl sulfatase C-terminal CP439_RS20540 PF14863 Alkyl sulfatase dimerisation CP439_RS20545 PF05481 Mycobacterium 19 kDa lipoprotein antigen CP439_RS20550 PF00672 HAMP domain CP439_RS20550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CP439_RS20550 PF00512 His Kinase A (phospho-acceptor) domain CP439_RS20555 PF00072 Response regulator receiver domain CP439_RS20555 PF00486 Transcriptional regulatory protein, C terminal CP439_RS20565 PF04072 Leucine carboxyl methyltransferase CP439_RS20605 PF00155 Aminotransferase class I and II CP439_RS20615 PF00378 Enoyl-CoA hydratase/isomerase CP439_RS20620 PF00144 Beta-lactamase CP439_RS20635 PF08240 Alcohol dehydrogenase GroES-like domain CP439_RS20635 PF00107 Zinc-binding dehydrogenase CP439_RS20640 PF00266 Aminotransferase class-V CP439_RS20650 PF10759 Protein of unknown function (DUF2587) CP439_RS20655 PF00005 ABC transporter CP439_RS20665 PF01061 ABC-2 type transporter CP439_RS20670 PF16363 GDP-mannose 4,6 dehydratase CP439_RS20680 PF01551 Peptidase family M23 CP439_RS20685 PF04072 Leucine carboxyl methyltransferase CP439_RS20690 PF01272 Transcription elongation factor, GreA/GreB, C-term CP439_RS20695 PF04138 GtrA-like protein CP439_RS20700 PF04030 D-arabinono-1,4-lactone oxidase CP439_RS20700 PF01565 FAD binding domain CP439_RS20705 PF00106 short chain dehydrogenase CP439_RS20710 PF12250 Arabinofuranosyltransferase N terminal CP439_RS20710 PF12249 Arabinofuranosyltransferase A C terminal CP439_RS20715 PF04602 Mycobacterial cell wall arabinan synthesis protein CP439_RS20715 PF14896 EmbC C-terminal domain CP439_RS20715 PF17689 Arabinosyltransferase concanavalin like domain CP439_RS20720 PF04602 Mycobacterial cell wall arabinan synthesis protein CP439_RS20720 PF17689 Arabinosyltransferase concanavalin like domain CP439_RS20720 PF14896 EmbC C-terminal domain CP439_RS20725 PF14896 EmbC C-terminal domain CP439_RS20725 PF17689 Arabinosyltransferase concanavalin like domain CP439_RS20725 PF04602 Mycobacterial cell wall arabinan synthesis protein CP439_RS20730 PF12706 Beta-lactamase superfamily domain CP439_RS20735 PF02770 Acyl-CoA dehydrogenase, middle domain CP439_RS20735 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CP439_RS20735 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CP439_RS20740 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 CP439_RS20740 PF13542 Helix-turn-helix domain of transposase family ISL3 CP439_RS20740 PF01610 Transposase CP439_RS20745 PF01039 Carboxyl transferase domain CP439_RS20750 PF00698 Acyl transferase domain CP439_RS20750 PF00109 Beta-ketoacyl synthase, N-terminal domain CP439_RS20750 PF00975 Thioesterase domain CP439_RS20750 PF02801 Beta-ketoacyl synthase, C-terminal domain CP439_RS20750 PF00550 Phosphopantetheine attachment site CP439_RS20750 PF16197 Ketoacyl-synthetase C-terminal extension CP439_RS20755 PF00501 AMP-binding enzyme CP439_RS20760 PF01083 Cutinase CP439_RS20765 PF00756 Putative esterase CP439_RS20770 PF00756 Putative esterase CP439_RS20780 PF01040 UbiA prenyltransferase family CP439_RS20785 PF01569 PAP2 superfamily CP439_RS20790 PF17994 Galactofuranosyltransferase 2 N-terminal CP439_RS20795 PF03275 UDP-galactopyranose mutase CP439_RS20800 PF01744 GLTT repeat (6 copies) CP439_RS20810 PF00934 PE family CP439_RS20840 PF01553 Acyltransferase CP439_RS20845 PF01636 Phosphotransferase enzyme family CP439_RS20850 PF00355 Rieske [2Fe-2S] domain CP439_RS20860 PF00668 Condensation domain CP439_RS20865 PF11139 Sap, sulfolipid-1-addressing protein CP439_RS20870 PF08237 PE-PPE domain CP439_RS20875 PF03176 MMPL family CP439_RS20880 PF00668 Condensation domain CP439_RS20885 PF08659 KR domain CP439_RS20885 PF00550 Phosphopantetheine attachment site CP439_RS20885 PF14765 Polyketide synthase dehydratase CP439_RS20885 PF00698 Acyl transferase domain CP439_RS20885 PF00109 Beta-ketoacyl synthase, N-terminal domain CP439_RS20885 PF16197 Ketoacyl-synthetase C-terminal extension CP439_RS20885 PF08240 Alcohol dehydrogenase GroES-like domain CP439_RS20885 PF00107 Zinc-binding dehydrogenase CP439_RS20885 PF02801 Beta-ketoacyl synthase, C-terminal domain CP439_RS20895 PF00501 AMP-binding enzyme CP439_RS20905 PF00239 Resolvase, N terminal domain CP439_RS20910 PF01593 Flavin containing amine oxidoreductase CP439_RS20925 PF00398 Ribosomal RNA adenine dimethylase CP439_RS20930 PF12833 Helix-turn-helix domain CP439_RS20935 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CP439_RS20935 PF02403 Seryl-tRNA synthetase N-terminal domain CP439_RS20940 PF13845 Septum formation CP439_RS20960 PF01842 ACT domain CP439_RS20960 PF00800 Prephenate dehydratase CP439_RS20970 PF03816 Cell envelope-related transcriptional attenuator domain CP439_RS20975 PF00210 Ferritin-like domain CP439_RS20980 PF03009 Glycerophosphoryl diester phosphodiesterase family CP439_RS21020 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CP439_RS21020 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CP439_RS21035 PF01169 Uncharacterized protein family UPF0016 CP439_RS21060 PF03737 Aldolase/RraA CP439_RS21065 PF00743 Flavin-binding monooxygenase-like CP439_RS21070 PF00440 Bacterial regulatory proteins, tetR family CP439_RS21075 PF14791 DNA polymerase beta thumb CP439_RS21075 PF02811 PHP domain CP439_RS21075 PF14716 Helix-hairpin-helix domain CP439_RS21085 PF07992 Pyridine nucleotide-disulphide oxidoreductase CP439_RS21085 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CP439_RS21090 PF00310 Glutamine amidotransferases class-II CP439_RS21090 PF01645 Conserved region in glutamate synthase CP439_RS21090 PF01493 GXGXG motif CP439_RS21090 PF04898 Glutamate synthase central domain CP439_RS21100 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CP439_RS21110 PF02467 Transcription factor WhiB CP439_RS21125 PF10824 Excreted virulence factor EspC, type VII ESX diderm CP439_RS21130 PF14011 EspG family CP439_RS21140 PF17866 AAA lid domain CP439_RS21140 PF00004 ATPase family associated with various cellular activities (AAA) CP439_RS21145 PF05108 Type VII secretion system ESX-1, transport TM domain B CP439_RS21150 PF01580 FtsK/SpoIIIE family CP439_RS21160 PF01580 FtsK/SpoIIIE family CP439_RS21165 PF00934 PE family CP439_RS21170 PF00823 PPE family CP439_RS21175 PF06013 Proteins of 100 residues with WXG CP439_RS21180 PF06013 Proteins of 100 residues with WXG CP439_RS21185 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CP439_RS21190 PF08817 WXG100 protein secretion system (Wss), protein YukD CP439_RS21205 PF02575 YbaB/EbfC DNA-binding family CP439_RS21210 PF18625 ESX-1 secreted protein B PE domain CP439_RS21215 PF11203 Putative type VII ESX secretion system translocon, EccE CP439_RS21220 PF00082 Subtilase family CP439_RS21225 PF17866 AAA lid domain CP439_RS21225 PF00004 ATPase family associated with various cellular activities (AAA) CP439_RS21230 PF11203 Putative type VII ESX secretion system translocon, EccE CP439_RS21235 PF00082 Subtilase family CP439_RS21240 PF08817 WXG100 protein secretion system (Wss), protein YukD CP439_RS21245 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CP439_RS21250 PF14011 EspG family CP439_RS21255 PF06013 Proteins of 100 residues with WXG CP439_RS21260 PF06013 Proteins of 100 residues with WXG CP439_RS21265 PF00823 PPE family CP439_RS21275 PF01580 FtsK/SpoIIIE family CP439_RS21280 PF05108 Type VII secretion system ESX-1, transport TM domain B CP439_RS21300 PF18645 Family of unknown function (DUF5631) CP439_RS21300 PF18646 Family of unknown function (DUF5632) CP439_RS21305 PF18645 Family of unknown function (DUF5631) CP439_RS21305 PF18646 Family of unknown function (DUF5632) CP439_RS21315 PF15598 Immunity protein 61 CP439_RS21320 PF14021 Tuberculosis necrotizing toxin CP439_RS21325 PF06013 Proteins of 100 residues with WXG CP439_RS21330 PF06013 Proteins of 100 residues with WXG CP439_RS21340 PF12627 Probable RNA and SrmB- binding site of polymerase A CP439_RS21340 PF13735 tRNA nucleotidyltransferase domain 2 putative CP439_RS21340 PF01743 Poly A polymerase head domain CP439_RS21350 PF00293 NUDIX domain CP439_RS21360 PF03023 Lipid II flippase MurJ CP439_RS21365 PF08281 Sigma-70, region 4 CP439_RS21365 PF04542 Sigma-70 region 2 CP439_RS21375 PF07992 Pyridine nucleotide-disulphide oxidoreductase CP439_RS21380 PF00085 Thioredoxin CP439_RS21385 PF01471 Putative peptidoglycan binding domain CP439_RS21385 PF01520 N-acetylmuramoyl-L-alanine amidase CP439_RS21400 PF17762 HTH domain found in ParB protein CP439_RS21400 PF02195 ParB-like nuclease domain CP439_RS21405 PF13614 AAA domain CP439_RS21410 PF02527 rRNA small subunit methyltransferase G CP439_RS21420 PF02096 60Kd inner membrane protein CP439_RS21425 PF01809 Putative membrane protein insertion efficiency factor CP439_RS21430 PF00825 Ribonuclease P CP439_RS21435 PF00468 Ribosomal protein L34