CP439_RS00005	SM00382	ATPases associated with a variety of cellular activities
CP439_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
CP439_RS00010	SM00480	DNA polymerase III beta subunit
CP439_RS00025	SM00387	Histidine kinase-like ATPases
CP439_RS00025	SM00433	TopoisomeraseII
CP439_RS00030	SM00434	DNA Topoisomerase IV
CP439_RS00085	SM00220	Serine/Threonine protein kinases, catalytic domain
CP439_RS00085	SM00740	CP439_RS00085
CP439_RS00090	SM00220	Serine/Threonine protein kinases, catalytic domain
CP439_RS00105	SM00331	Sigma factor PP2C-like phosphatases
CP439_RS00105	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CP439_RS00110	SM00240	Forkhead associated domain
CP439_RS00115	SM00240	Forkhead associated domain
CP439_RS00135	SM00530	Helix-turn-helix XRE-family like proteins 
CP439_RS00235	SM00347	helix_turn_helix multiple antibiotic resistance protein
CP439_RS00240	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CP439_RS00315	SM00305	Hint (Hedgehog/Intein) domain C-terminal region
CP439_RS00315	SM00306	Hint (Hedgehog/Intein) domain N-terminal region
CP439_RS00315	SM00382	ATPases associated with a variety of cellular activities
CP439_RS00325	SM00506	Appr-1"-p processing enzyme
CP439_RS00405	SM00100	Cyclic nucleotide-monophosphate binding domain
CP439_RS00405	SM00382	ATPases associated with a variety of cellular activities
CP439_RS00455	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CP439_RS00560	SM00823	Phosphopantetheine attachment site
CP439_RS00575	SM00100	Cyclic nucleotide-monophosphate binding domain
CP439_RS00585	SM00833	Cobalamin synthesis protein cobW C-terminal domain
CP439_RS00660	SM00838	Elongation factor G C-terminus
CP439_RS00660	SM00889	Elongation factor G, domain IV
CP439_RS00685	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CP439_RS00690	SM00642	Alpha-amylase domain
CP439_RS00800	SM00822	CP439_RS00800
CP439_RS00805	SM00829	Enoylreductase
CP439_RS00850	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CP439_RS00850	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CP439_RS00890	SM00829	Enoylreductase
CP439_RS01015	SM01217	CP439_RS01015
CP439_RS01060	SM00382	ATPases associated with a variety of cellular activities
CP439_RS01065	SM00421	helix_turn_helix, Lux Regulon
CP439_RS01075	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CP439_RS01155	SM00729	Elongator protein 3, MiaB family, Radical SAM
CP439_RS01310	SM00822	CP439_RS01310
CP439_RS01325	SM00903	Flavin reductase like domain
CP439_RS01405	SM00862	Transcriptional regulatory protein, C terminal
CP439_RS01420	SM00797	Allophanate hydrolase subunit 2
CP439_RS01425	SM00796	Allophanate hydrolase subunit 1
CP439_RS01520	SM00382	ATPases associated with a variety of cellular activities
CP439_RS01530	SM00382	ATPases associated with a variety of cellular activities
CP439_RS01625	SM00822	CP439_RS01625
CP439_RS01645	SM00014	Acid phosphatase homologues
CP439_RS01720	SM00984	UDP binding domain
CP439_RS01730	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CP439_RS01730	SM00450	Rhodanese Homology Domain
CP439_RS01790	SM00507	HNH nucleases
CP439_RS01810	SM00421	helix_turn_helix, Lux Regulon
CP439_RS01875	SM00271	DnaJ molecular chaperone homology domain
CP439_RS01880	SM00422	helix_turn_helix, mercury resistance
CP439_RS01910	SM00788	Adenylosuccinate synthetase
CP439_RS01935	SM00116	Domain in cystathionine beta-synthase and other proteins.
CP439_RS01935	SM00924	MgtE intracellular N domain
CP439_RS01965	SM00327	von Willebrand factor (vWF) type A domain
CP439_RS01975	SM00382	ATPases associated with a variety of cellular activities
CP439_RS01990	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CP439_RS02000	SM01092	CO dehydrogenase flavoprotein C-terminal domain
CP439_RS02045	SM00382	ATPases associated with a variety of cellular activities
CP439_RS02045	SM01086	C-terminal, D2-small domain, of ClpB protein
CP439_RS02055	SM00421	helix_turn_helix, Lux Regulon
CP439_RS02075	SM00450	Rhodanese Homology Domain
CP439_RS02090	SM00507	HNH nucleases
CP439_RS02160	SM00823	Phosphopantetheine attachment site
CP439_RS02160	SM00824	Thioesterase
CP439_RS02160	SM00825	Beta-ketoacyl synthase
CP439_RS02160	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CP439_RS02165	SM00849	Metallo-beta-lactamase superfamily
CP439_RS02185	SM00220	Serine/Threonine protein kinases, catalytic domain
CP439_RS02190	SM00062	Bacterial periplasmic substrate-binding proteins
CP439_RS02310	SM00464	Found in ATP-dependent protease La (LON)
CP439_RS02315	SM00382	ATPases associated with a variety of cellular activities
CP439_RS02315	SM01073	Cell division protein 48 (CDC48) N-terminal domain
CP439_RS02330	SM00852	Probable molybdopterin binding domain
CP439_RS02480	SM00530	Helix-turn-helix XRE-family like proteins 
CP439_RS02530	SM00530	Helix-turn-helix XRE-family like proteins 
CP439_RS02550	SM01133	CP439_RS02550
CP439_RS02605	SM00855	Phosphoglycerate mutase family
CP439_RS02610	SM00387	Histidine kinase-like ATPases
CP439_RS02610	SM00388	His Kinase A (phosphoacceptor) domain
CP439_RS02620	SM00448	cheY-homologous receiver domain
CP439_RS02620	SM00862	Transcriptional regulatory protein, C terminal
CP439_RS02640	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CP439_RS02640	SM00895	CP439_RS02640
CP439_RS02665	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CP439_RS02680	SM01155	CP439_RS02680
CP439_RS02690	SM00563	Phosphate acyltransferases
CP439_RS02740	SM01004	Delta-aminolevulinic acid dehydratase
CP439_RS02755	SM00507	HNH nucleases
CP439_RS02810	SM00855	Phosphoglycerate mutase family
CP439_RS02960	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CP439_RS03075	SM00854	Bacterial capsule synthesis protein PGA_cap
CP439_RS03085	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CP439_RS03140	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CP439_RS03140	SM00895	CP439_RS03140
CP439_RS03205	SM00966	SpoVT / AbrB like domain 
CP439_RS03210	SM00387	Histidine kinase-like ATPases
CP439_RS03215	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CP439_RS03220	SM00448	cheY-homologous receiver domain
CP439_RS03220	SM00862	Transcriptional regulatory protein, C terminal
CP439_RS03235	SM00857	Resolvase, N terminal domain
CP439_RS03375	SM00897	FIST N domain
CP439_RS03375	SM01204	CP439_RS03375
CP439_RS03405	SM00849	Metallo-beta-lactamase superfamily
CP439_RS03455	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CP439_RS03460	SM00649	Ribosomal protein L11/L12
CP439_RS03500	SM00872	Alpha mannosidase, middle domain
CP439_RS03535	SM00382	ATPases associated with a variety of cellular activities
CP439_RS03605	SM00663	RNA polymerase I subunit A N-terminus
CP439_RS03620	SM00518	AP endonuclease family 2
CP439_RS03690	SM00838	Elongation factor G C-terminus
CP439_RS03690	SM00889	Elongation factor G, domain IV
CP439_RS03705	SM00822	CP439_RS03705
CP439_RS03745	SM00729	Elongator protein 3, MiaB family, Radical SAM
CP439_RS03795	SM01403	CP439_RS03795
CP439_RS03815	SM01382	CP439_RS03815
CP439_RS03815	SM01383	CP439_RS03815
CP439_RS03830	SM00322	K homology RNA-binding domain
CP439_RS03865	SM01374	CP439_RS03865
CP439_RS03870	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CP439_RS03930	SM01007	Class II Aldolase and Adducin N-terminal domain
CP439_RS03985	SM00347	helix_turn_helix multiple antibiotic resistance protein
CP439_RS04095	SM00855	Phosphoglycerate mutase family
CP439_RS04120	SM00448	cheY-homologous receiver domain
CP439_RS04120	SM00862	Transcriptional regulatory protein, C terminal
CP439_RS04125	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CP439_RS04125	SM00387	Histidine kinase-like ATPases
CP439_RS04125	SM00388	His Kinase A (phosphoacceptor) domain
CP439_RS04140	SM00829	Enoylreductase
CP439_RS04195	SM01209	CP439_RS04195
CP439_RS04195	SM01210	CP439_RS04195
CP439_RS04220	SM00998	Adenylosuccinate lyase C-terminus
CP439_RS04265	SM00849	Metallo-beta-lactamase superfamily
CP439_RS04280	SM01211	CP439_RS04280
CP439_RS04290	SM00460	Transglutaminase/protease-like homologues
CP439_RS04300	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CP439_RS04300	SM00866	CP439_RS04300
CP439_RS04420	SM00450	Rhodanese Homology Domain
CP439_RS04435	SM00862	Transcriptional regulatory protein, C terminal
CP439_RS04445	SM00382	ATPases associated with a variety of cellular activities
CP439_RS04480	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CP439_RS04605	SM00421	helix_turn_helix, Lux Regulon
CP439_RS04605	SM00448	cheY-homologous receiver domain
CP439_RS04610	SM00387	Histidine kinase-like ATPases
CP439_RS04695	SM00487	DEAD-like helicases superfamily
CP439_RS04695	SM00490	helicase superfamily c-terminal domain
CP439_RS04715	SM00852	Probable molybdopterin binding domain
CP439_RS04735	SM00729	Elongator protein 3, MiaB family, Radical SAM
CP439_RS04745	SM00357	Cold shock protein domain
CP439_RS04765	SM00897	FIST N domain
CP439_RS04765	SM01204	CP439_RS04765
CP439_RS04795	SM00347	helix_turn_helix multiple antibiotic resistance protein
CP439_RS04850	SM00421	helix_turn_helix, Lux Regulon
CP439_RS04855	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
CP439_RS04915	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CP439_RS04915	SM00387	Histidine kinase-like ATPases
CP439_RS04915	SM00388	His Kinase A (phosphoacceptor) domain
CP439_RS04920	SM00448	cheY-homologous receiver domain
CP439_RS04920	SM00862	Transcriptional regulatory protein, C terminal
CP439_RS05025	SM00857	Resolvase, N terminal domain
CP439_RS05075	SM00220	Serine/Threonine protein kinases, catalytic domain
CP439_RS05085	SM00382	ATPases associated with a variety of cellular activities
CP439_RS05105	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
CP439_RS05115	SM00849	Metallo-beta-lactamase superfamily
CP439_RS05140	SM01232	CP439_RS05140
CP439_RS05170	SM00830	Chorismate mutase type II
CP439_RS05190	SM00881	CoA binding domain
CP439_RS05220	SM00798	AICARFT/IMPCHase bienzyme
CP439_RS05220	SM00851	MGS-like domain
CP439_RS05230	SM00327	von Willebrand factor (vWF) type A domain
CP439_RS05305	SM00878	Biotin carboxylase C-terminal domain
CP439_RS05355	SM00448	cheY-homologous receiver domain
CP439_RS05355	SM00862	Transcriptional regulatory protein, C terminal
CP439_RS05360	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CP439_RS05360	SM00387	Histidine kinase-like ATPases
CP439_RS05360	SM00388	His Kinase A (phosphoacceptor) domain
CP439_RS05365	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CP439_RS05370	SM00852	Probable molybdopterin binding domain
CP439_RS05380	SM00382	ATPases associated with a variety of cellular activities
CP439_RS05400	SM00858	CP439_RS05400
CP439_RS05405	SM00834	Putative regulatory protein
CP439_RS05420	SM00852	Probable molybdopterin binding domain
CP439_RS05460	SM00100	Cyclic nucleotide-monophosphate binding domain
CP439_RS05515	SM01208	CP439_RS05515
CP439_RS05520	SM00650	Ribosomal RNA adenine dimethylases
CP439_RS05560	SM01400	CP439_RS05560
CP439_RS05580	SM00487	DEAD-like helicases superfamily
CP439_RS05580	SM00490	helicase superfamily c-terminal domain
CP439_RS05580	SM00982	CP439_RS05580
CP439_RS05580	SM01058	CarD-like/TRCF domain
CP439_RS05595	SM01192	CP439_RS05595
CP439_RS05595	SM01193	CP439_RS05595
CP439_RS05620	SM00448	cheY-homologous receiver domain
CP439_RS05620	SM00862	Transcriptional regulatory protein, C terminal
CP439_RS05625	SM00387	Histidine kinase-like ATPases
CP439_RS05625	SM00388	His Kinase A (phosphoacceptor) domain
CP439_RS05655	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CP439_RS05655	SM00387	Histidine kinase-like ATPases
CP439_RS05655	SM00388	His Kinase A (phosphoacceptor) domain
CP439_RS05660	SM00448	cheY-homologous receiver domain
CP439_RS05660	SM00862	Transcriptional regulatory protein, C terminal
CP439_RS05745	SM00347	helix_turn_helix multiple antibiotic resistance protein
CP439_RS05750	SM00822	CP439_RS05750
CP439_RS05845	SM00450	Rhodanese Homology Domain
CP439_RS05900	SM00116	Domain in cystathionine beta-synthase and other proteins.
CP439_RS06010	SM00670	Large family of predicted nucleotide-binding domains
CP439_RS06140	SM01350	CP439_RS06140
CP439_RS06170	SM00507	HNH nucleases
CP439_RS06175	SM00530	Helix-turn-helix XRE-family like proteins 
CP439_RS06300	SM00507	HNH nucleases
CP439_RS06315	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CP439_RS06375	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CP439_RS06395	SM00838	Elongation factor G C-terminus
CP439_RS06435	SM00729	Elongator protein 3, MiaB family, Radical SAM
CP439_RS06465	SM00487	DEAD-like helicases superfamily
CP439_RS06470	SM00822	CP439_RS06470
CP439_RS06470	SM00823	Phosphopantetheine attachment site
CP439_RS06470	SM00825	Beta-ketoacyl synthase
CP439_RS06470	SM00826	CP439_RS06470
CP439_RS06470	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CP439_RS06470	SM00829	Enoylreductase
CP439_RS06595	SM00382	ATPases associated with a variety of cellular activities
CP439_RS06650	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
CP439_RS06665	SM00382	ATPases associated with a variety of cellular activities
CP439_RS06695	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CP439_RS06745	SM00116	Domain in cystathionine beta-synthase and other proteins.
CP439_RS06745	SM00924	MgtE intracellular N domain
CP439_RS06775	SM00382	ATPases associated with a variety of cellular activities
CP439_RS06815	SM00822	CP439_RS06815
CP439_RS06830	SM00861	Transketolase, pyrimidine binding domain
CP439_RS06855	SM00487	DEAD-like helicases superfamily
CP439_RS06855	SM00490	helicase superfamily c-terminal domain
CP439_RS06885	SM00986	Uracil DNA glycosylase superfamily
CP439_RS06885	SM00987	UreE urease accessory protein, C-terminal domain 
CP439_RS06910	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
CP439_RS06920	SM00220	Serine/Threonine protein kinases, catalytic domain
CP439_RS06925	SM00240	Forkhead associated domain
CP439_RS06925	SM00862	Transcriptional regulatory protein, C terminal
CP439_RS06925	SM01043	Bacterial transcriptional activator domain
CP439_RS06955	SM00382	ATPases associated with a variety of cellular activities
CP439_RS06960	SM00382	ATPases associated with a variety of cellular activities
CP439_RS06975	SM00855	Phosphoglycerate mutase family
CP439_RS07000	SM00382	ATPases associated with a variety of cellular activities
CP439_RS07015	SM00947	Carbonic anhydrase
CP439_RS07035	SM00257	Lysin motif
CP439_RS07065	SM00836	DALR anticodon binding domain
CP439_RS07065	SM01016	Arginyl tRNA synthetase N terminal dom
CP439_RS07100	SM00357	Cold shock protein domain
CP439_RS07100	SM00382	ATPases associated with a variety of cellular activities
CP439_RS07100	SM00959	Rho termination factor, N-terminal domain
CP439_RS07115	SM00937	CP439_RS07115
CP439_RS07170	SM00382	ATPases associated with a variety of cellular activities
CP439_RS07220	SM00342	helix_turn_helix, arabinose operon control protein
CP439_RS07220	SM00478	endonuclease III
CP439_RS07220	SM01009	AlkA N-terminal domain
CP439_RS07225	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
CP439_RS07225	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CP439_RS07230	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
CP439_RS07230	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CP439_RS07235	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
CP439_RS07235	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CP439_RS07270	SM00642	Alpha-amylase domain
CP439_RS07275	SM00642	Alpha-amylase domain
CP439_RS07285	SM00487	DEAD-like helicases superfamily
CP439_RS07285	SM00491	CP439_RS07285
CP439_RS07310	SM00232	JAB/MPN domain
CP439_RS07375	SM01006	Siderophore biosynthesis protein domain
CP439_RS07385	SM00382	ATPases associated with a variety of cellular activities
CP439_RS07390	SM00382	ATPases associated with a variety of cellular activities
CP439_RS07400	SM00822	CP439_RS07400
CP439_RS07425	SM00052	Putative diguanylate phosphodiesterase
CP439_RS07425	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CP439_RS07425	SM00267	diguanylate cyclase
CP439_RS07440	SM00052	Putative diguanylate phosphodiesterase
CP439_RS07445	SM00421	helix_turn_helix, Lux Regulon
CP439_RS07480	SM00331	Sigma factor PP2C-like phosphatases
CP439_RS07490	SM00954	Region found in RelA / SpoT proteins
CP439_RS07550	SM00507	HNH nucleases
CP439_RS07575	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
CP439_RS07580	SM00851	MGS-like domain
CP439_RS07580	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CP439_RS07585	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CP439_RS07610	SM00072	Guanylate kinase homologues.
CP439_RS07615	SM01409	CP439_RS07615
CP439_RS07640	SM00342	helix_turn_helix, arabinose operon control protein
CP439_RS07685	SM00347	helix_turn_helix multiple antibiotic resistance protein
CP439_RS07735	SM01119	CP439_RS07735
CP439_RS07760	SM00458	Ricin-type beta-trefoil
CP439_RS07765	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CP439_RS07765	SM00465	GIY-YIG type nucleases (URI domain)
CP439_RS07805	SM00563	Phosphate acyltransferases
CP439_RS07850	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CP439_RS07940	SM00861	Transketolase, pyrimidine binding domain
CP439_RS07970	SM00829	Enoylreductase
CP439_RS07990	SM00382	ATPases associated with a variety of cellular activities
CP439_RS08005	SM00305	Hint (Hedgehog/Intein) domain C-terminal region
CP439_RS08005	SM00306	Hint (Hedgehog/Intein) domain N-terminal region
CP439_RS08015	SM00382	ATPases associated with a variety of cellular activities
CP439_RS08065	SM00382	ATPases associated with a variety of cellular activities
CP439_RS08110	SM00327	von Willebrand factor (vWF) type A domain
CP439_RS08120	SM00822	CP439_RS08120
CP439_RS08145	SM00244	prohibitin homologues
CP439_RS08370	SM00822	CP439_RS08370
CP439_RS08370	SM00823	Phosphopantetheine attachment site
CP439_RS08370	SM00825	Beta-ketoacyl synthase
CP439_RS08370	SM00826	CP439_RS08370
CP439_RS08370	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CP439_RS08370	SM00829	Enoylreductase
CP439_RS08425	SM00870	CP439_RS08425
CP439_RS08435	SM00363	S4 RNA-binding domain
CP439_RS08450	SM00822	CP439_RS08450
CP439_RS08470	SM00481	DNA polymerase alpha chain like domain
CP439_RS08490	SM00563	Phosphate acyltransferases
CP439_RS08545	SM00642	Alpha-amylase domain
CP439_RS08550	SM00642	Alpha-amylase domain
CP439_RS08555	SM00642	Alpha-amylase domain
CP439_RS08650	SM00885	D5 N terminal like
CP439_RS08670	SM00857	Resolvase, N terminal domain
CP439_RS08690	SM00729	Elongator protein 3, MiaB family, Radical SAM
CP439_RS08690	SM00876	Biotin and Thiamin Synthesis associated domain
CP439_RS08850	SM00382	ATPases associated with a variety of cellular activities
CP439_RS08855	SM00382	ATPases associated with a variety of cellular activities
CP439_RS08875	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
CP439_RS08885	SM00448	cheY-homologous receiver domain
CP439_RS08885	SM01012	CP439_RS08885
CP439_RS08900	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CP439_RS08900	SM00474	3'-5' exonuclease
CP439_RS08900	SM00475	5'-3' exonuclease
CP439_RS08900	SM00482	DNA polymerase A domain
CP439_RS08905	SM00316	Ribosomal protein S1-like RNA-binding domain
CP439_RS08925	SM00487	DEAD-like helicases superfamily
CP439_RS08925	SM00490	helicase superfamily c-terminal domain
CP439_RS08950	SM00849	Metallo-beta-lactamase superfamily
CP439_RS08990	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CP439_RS09005	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
CP439_RS09020	SM00873	B3/4 domain
CP439_RS09020	SM00874	tRNA synthetase B5 domain
CP439_RS09020	SM00896	Ferredoxin-fold anticodon binding domain
CP439_RS09030	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CP439_RS09075	SM00822	CP439_RS09075
CP439_RS09075	SM00823	Phosphopantetheine attachment site
CP439_RS09075	SM00825	Beta-ketoacyl synthase
CP439_RS09075	SM00826	CP439_RS09075
CP439_RS09075	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CP439_RS09075	SM00829	Enoylreductase
CP439_RS09075	SM01294	CP439_RS09075
CP439_RS09080	SM00825	Beta-ketoacyl synthase
CP439_RS09080	SM00826	CP439_RS09080
CP439_RS09080	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CP439_RS09080	SM00829	Enoylreductase
CP439_RS09085	SM00822	CP439_RS09085
CP439_RS09085	SM00823	Phosphopantetheine attachment site
CP439_RS09085	SM01294	CP439_RS09085
CP439_RS09090	SM00823	Phosphopantetheine attachment site
CP439_RS09090	SM00825	Beta-ketoacyl synthase
CP439_RS09090	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CP439_RS09105	SM00382	ATPases associated with a variety of cellular activities
CP439_RS09130	SM00460	Transglutaminase/protease-like homologues
CP439_RS09135	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CP439_RS09135	SM00450	Rhodanese Homology Domain
CP439_RS09140	SM00100	Cyclic nucleotide-monophosphate binding domain
CP439_RS09140	SM00419	helix_turn_helix, cAMP Regulatory protein
CP439_RS09200	SM00382	ATPases associated with a variety of cellular activities
CP439_RS09210	SM00363	S4 RNA-binding domain
CP439_RS09235	SM00363	S4 RNA-binding domain
CP439_RS09275	SM00507	HNH nucleases
CP439_RS09325	SM00363	S4 RNA-binding domain
CP439_RS09335	SM00382	ATPases associated with a variety of cellular activities
CP439_RS09340	SM00822	CP439_RS09340
CP439_RS09365	SM00346	helix_turn_helix isocitrate lyase regulation
CP439_RS09365	SM00419	helix_turn_helix, cAMP Regulatory protein
CP439_RS09465	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CP439_RS09500	SM00220	Serine/Threonine protein kinases, catalytic domain
CP439_RS09515	SM00220	Serine/Threonine protein kinases, catalytic domain
CP439_RS09520	SM00240	Forkhead associated domain
CP439_RS09520	SM00382	ATPases associated with a variety of cellular activities
CP439_RS09570	SM01110	CP439_RS09570
CP439_RS09600	SM00507	HNH nucleases
CP439_RS09650	SM01012	CP439_RS09650
CP439_RS09655	SM00346	helix_turn_helix isocitrate lyase regulation
CP439_RS09705	SM00382	ATPases associated with a variety of cellular activities
CP439_RS09780	SM00382	ATPases associated with a variety of cellular activities
CP439_RS09895	SM00382	ATPases associated with a variety of cellular activities
CP439_RS09905	SM00957	SecA DEAD-like domain
CP439_RS09905	SM00958	SecA preprotein cross-linking domain
CP439_RS09935	SM00240	Forkhead associated domain
CP439_RS09940	SM00422	helix_turn_helix, mercury resistance
CP439_RS09950	SM00422	helix_turn_helix, mercury resistance
CP439_RS09970	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
CP439_RS09975	SM00327	von Willebrand factor (vWF) type A domain
CP439_RS10005	SM00116	Domain in cystathionine beta-synthase and other proteins.
CP439_RS10010	SM01091	Transporter associated domain
CP439_RS10015	SM01240	CP439_RS10015
CP439_RS10020	SM01350	CP439_RS10020
CP439_RS10095	SM00382	ATPases associated with a variety of cellular activities
CP439_RS10205	SM01230	CP439_RS10205
CP439_RS10240	SM00830	Chorismate mutase type II
CP439_RS10280	SM00867	YceI-like domain 
CP439_RS10330	SM00506	Appr-1"-p processing enzyme
CP439_RS10335	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
CP439_RS10340	SM00852	Probable molybdopterin binding domain
CP439_RS10395	SM00829	Enoylreductase
CP439_RS10400	SM00849	Metallo-beta-lactamase superfamily
CP439_RS10440	SM00563	Phosphate acyltransferases
CP439_RS10495	SM00342	helix_turn_helix, arabinose operon control protein
CP439_RS10540	SM00903	Flavin reductase like domain
CP439_RS10570	SM00507	HNH nucleases
CP439_RS10630	SM00530	Helix-turn-helix XRE-family like proteins 
CP439_RS10790	SM01110	CP439_RS10790
CP439_RS10795	SM01152	CP439_RS10795
CP439_RS10810	SM00637	CP439_RS10810
CP439_RS10815	SM00650	Ribosomal RNA adenine dimethylases
CP439_RS10825	SM00953	CP439_RS10825
CP439_RS10865	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CP439_RS10880	SM00831	Cation transporter/ATPase, N-terminus
CP439_RS10985	SM00507	HNH nucleases
CP439_RS11000	SM00530	Helix-turn-helix XRE-family like proteins 
CP439_RS11020	SM00530	Helix-turn-helix XRE-family like proteins 
CP439_RS11040	SM00487	DEAD-like helicases superfamily
CP439_RS11055	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CP439_RS11055	SM00387	Histidine kinase-like ATPases
CP439_RS11090	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CP439_RS11110	SM00382	ATPases associated with a variety of cellular activities
CP439_RS11160	SM00822	CP439_RS11160
CP439_RS11160	SM00823	Phosphopantetheine attachment site
CP439_RS11160	SM00825	Beta-ketoacyl synthase
CP439_RS11160	SM00826	CP439_RS11160
CP439_RS11160	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CP439_RS11160	SM00829	Enoylreductase
CP439_RS11160	SM01294	CP439_RS11160
CP439_RS11365	SM00220	Serine/Threonine protein kinases, catalytic domain
CP439_RS11375	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CP439_RS11375	SM00475	5'-3' exonuclease
CP439_RS11385	SM00487	DEAD-like helicases superfamily
CP439_RS11385	SM00490	helicase superfamily c-terminal domain
CP439_RS11385	SM01142	CP439_RS11385
CP439_RS11420	SM00507	HNH nucleases
CP439_RS11425	SM00487	DEAD-like helicases superfamily
CP439_RS11425	SM00490	helicase superfamily c-terminal domain
CP439_RS11500	SM00382	ATPases associated with a variety of cellular activities
CP439_RS11545	SM01018	B12 binding domain
CP439_RS11570	SM00822	CP439_RS11570
CP439_RS11600	SM00855	Phosphoglycerate mutase family
CP439_RS11690	SM00864	Tubulin/FtsZ family, GTPase domain
CP439_RS11690	SM00865	Tubulin/FtsZ family, C-terminal domain
CP439_RS11820	SM00220	Serine/Threonine protein kinases, catalytic domain
CP439_RS11855	SM00563	Phosphate acyltransferases
CP439_RS11905	SM00465	GIY-YIG type nucleases (URI domain)
CP439_RS11905	SM00479	CP439_RS11905
CP439_RS12010	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
CP439_RS12020	SM00822	CP439_RS12020
CP439_RS12040	SM00729	Elongator protein 3, MiaB family, Radical SAM
CP439_RS12055	SM01230	CP439_RS12055
CP439_RS12065	SM01230	CP439_RS12065
CP439_RS12090	SM00880	CP439_RS12090
CP439_RS12090	SM01118	CP439_RS12090
CP439_RS12105	SM00855	Phosphoglycerate mutase family
CP439_RS12140	SM00226	Low molecular weight phosphatase family
CP439_RS12195	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CP439_RS12205	SM00825	Beta-ketoacyl synthase
CP439_RS12210	SM00825	Beta-ketoacyl synthase
CP439_RS12240	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CP439_RS12285	SM00829	Enoylreductase
CP439_RS12290	SM00849	Metallo-beta-lactamase superfamily
CP439_RS12435	SM00450	Rhodanese Homology Domain
CP439_RS12480	SM00387	Histidine kinase-like ATPases
CP439_RS12485	SM00849	Metallo-beta-lactamase superfamily
CP439_RS12490	SM01110	CP439_RS12490
CP439_RS12660	SM00344	helix_turn_helix ASNC type
CP439_RS12670	SM00382	ATPases associated with a variety of cellular activities
CP439_RS12675	SM00347	helix_turn_helix multiple antibiotic resistance protein
CP439_RS12710	SM00919	Malic enzyme, NAD binding domain
CP439_RS12710	SM01274	CP439_RS12710
CP439_RS12775	SM00400	zinc finger
CP439_RS12775	SM00493	CP439_RS12775
CP439_RS12775	SM00766	DNA primase DnaG DnaB-binding
CP439_RS12780	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CP439_RS12855	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CP439_RS12895	SM00116	Domain in cystathionine beta-synthase and other proteins.
CP439_RS12895	SM01091	Transporter associated domain
CP439_RS12905	SM00322	K homology RNA-binding domain
CP439_RS12930	SM00271	DnaJ molecular chaperone homology domain
CP439_RS12950	SM00923	MbtH-like protein
CP439_RS12960	SM00823	Phosphopantetheine attachment site
CP439_RS12965	SM00823	Phosphopantetheine attachment site
CP439_RS12965	SM01294	CP439_RS12965
CP439_RS12970	SM00822	CP439_RS12970
CP439_RS12970	SM00823	Phosphopantetheine attachment site
CP439_RS12970	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CP439_RS12975	SM00825	Beta-ketoacyl synthase
CP439_RS12980	SM00823	Phosphopantetheine attachment site
CP439_RS13010	SM00729	Elongator protein 3, MiaB family, Radical SAM
CP439_RS13070	SM00382	ATPases associated with a variety of cellular activities
CP439_RS13110	SM00838	Elongation factor G C-terminus
CP439_RS13120	SM00116	Domain in cystathionine beta-synthase and other proteins.
CP439_RS13125	SM00849	Metallo-beta-lactamase superfamily
CP439_RS13145	SM00460	Transglutaminase/protease-like homologues
CP439_RS13175	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CP439_RS13195	SM00855	Phosphoglycerate mutase family
CP439_RS13235	SM00382	ATPases associated with a variety of cellular activities
CP439_RS13285	SM00100	Cyclic nucleotide-monophosphate binding domain
CP439_RS13290	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
CP439_RS13290	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CP439_RS13320	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CP439_RS13350	SM00316	Ribosomal protein S1-like RNA-binding domain
CP439_RS13355	SM00562	CP439_RS13355
CP439_RS13415	SM00382	ATPases associated with a variety of cellular activities
CP439_RS13415	SM00994	ClpX C4-type zinc finger
CP439_RS13415	SM01086	C-terminal, D2-small domain, of ClpB protein
CP439_RS13460	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CP439_RS13460	SM01232	CP439_RS13460
CP439_RS13490	SM00507	HNH nucleases
CP439_RS13500	SM00642	Alpha-amylase domain
CP439_RS13530	SM00382	ATPases associated with a variety of cellular activities
CP439_RS13560	SM00563	Phosphate acyltransferases
CP439_RS13565	SM00563	Phosphate acyltransferases
CP439_RS13595	SM00421	helix_turn_helix, Lux Regulon
CP439_RS13640	SM00861	Transketolase, pyrimidine binding domain
CP439_RS13665	SM00878	Biotin carboxylase C-terminal domain
CP439_RS13675	SM00882	Coenzyme A transferase
CP439_RS13680	SM00882	Coenzyme A transferase
CP439_RS13715	SM00479	CP439_RS13715
CP439_RS13760	SM00530	Helix-turn-helix XRE-family like proteins 
CP439_RS13815	SM00825	Beta-ketoacyl synthase
CP439_RS13815	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CP439_RS13850	SM00891	ERCC4 domain
CP439_RS13880	SM00841	Elongation factor P, C-terminal
CP439_RS13880	SM01185	CP439_RS13880
CP439_RS13995	SM00732	Likely ribonuclease with RNase H fold.
CP439_RS14000	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CP439_RS14020	SM00382	ATPases associated with a variety of cellular activities
CP439_RS14050	SM00100	Cyclic nucleotide-monophosphate binding domain
CP439_RS14050	SM00382	ATPases associated with a variety of cellular activities
CP439_RS14055	SM00100	Cyclic nucleotide-monophosphate binding domain
CP439_RS14060	SM00460	Transglutaminase/protease-like homologues
CP439_RS14075	SM00460	Transglutaminase/protease-like homologues
CP439_RS14120	SM00729	Elongator protein 3, MiaB family, Radical SAM
CP439_RS14135	SM00849	Metallo-beta-lactamase superfamily
CP439_RS14145	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CP439_RS14145	SM00954	Region found in RelA / SpoT proteins
CP439_RS14170	SM01323	CP439_RS14170
CP439_RS14185	SM00823	Phosphopantetheine attachment site
CP439_RS14185	SM01294	CP439_RS14185
CP439_RS14195	SM00382	ATPases associated with a variety of cellular activities
CP439_RS14200	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CP439_RS14210	SM00966	SpoVT / AbrB like domain 
CP439_RS14310	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CP439_RS14375	SM00116	Domain in cystathionine beta-synthase and other proteins.
CP439_RS14450	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CP439_RS14460	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CP439_RS14465	SM00226	Low molecular weight phosphatase family
CP439_RS14690	SM00341	Helicase and RNase D C-terminal
CP439_RS14690	SM00474	3'-5' exonuclease
CP439_RS14695	SM00861	Transketolase, pyrimidine binding domain
CP439_RS14705	SM00116	Domain in cystathionine beta-synthase and other proteins.
CP439_RS14730	SM00382	ATPases associated with a variety of cellular activities
CP439_RS14850	SM00529	Helix-turn-helix diphteria tox regulatory element
CP439_RS14850	SM00899	CP439_RS14850
CP439_RS14960	SM00729	Elongator protein 3, MiaB family, Radical SAM
CP439_RS14985	SM00305	Hint (Hedgehog/Intein) domain C-terminal region
CP439_RS14985	SM00306	Hint (Hedgehog/Intein) domain N-terminal region
CP439_RS14985	SM00382	ATPases associated with a variety of cellular activities
CP439_RS15035	SM00530	Helix-turn-helix XRE-family like proteins 
CP439_RS15050	SM00843	CP439_RS15050
CP439_RS15070	SM00849	Metallo-beta-lactamase superfamily
CP439_RS15075	SM01130	CP439_RS15075
CP439_RS15210	SM00344	helix_turn_helix ASNC type
CP439_RS15215	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CP439_RS15215	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CP439_RS15230	SM00316	Ribosomal protein S1-like RNA-binding domain
CP439_RS15230	SM00322	K homology RNA-binding domain
CP439_RS15240	SM01387	CP439_RS15240
CP439_RS15245	SM00904	Riboflavin kinase
CP439_RS15255	SM00529	Helix-turn-helix diphteria tox regulatory element
CP439_RS15255	SM00899	CP439_RS15255
CP439_RS15275	SM00857	Resolvase, N terminal domain
CP439_RS15315	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
CP439_RS15480	SM00382	ATPases associated with a variety of cellular activities
CP439_RS15525	SM00316	Ribosomal protein S1-like RNA-binding domain
CP439_RS15570	SM00327	von Willebrand factor (vWF) type A domain
CP439_RS15570	SM00382	ATPases associated with a variety of cellular activities
CP439_RS15625	SM01230	CP439_RS15625
CP439_RS15675	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CP439_RS15695	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
CP439_RS15710	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
CP439_RS15755	SM00862	Transcriptional regulatory protein, C terminal
CP439_RS15765	SM00857	Resolvase, N terminal domain
CP439_RS15770	SM00347	helix_turn_helix multiple antibiotic resistance protein
CP439_RS15820	SM00382	ATPases associated with a variety of cellular activities
CP439_RS15915	SM00382	ATPases associated with a variety of cellular activities
CP439_RS15915	SM00962	SRP54-type protein, GTPase domain
CP439_RS15915	SM00963	SRP54-type protein, helical bundle domain
CP439_RS15920	SM00487	DEAD-like helicases superfamily
CP439_RS15925	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CP439_RS15930	SM00938	Nitrogen regulatory protein P-II
CP439_RS15945	SM00382	ATPases associated with a variety of cellular activities
CP439_RS15945	SM00962	SRP54-type protein, GTPase domain
CP439_RS15945	SM00963	SRP54-type protein, helical bundle domain
CP439_RS15950	SM00968	SMC proteins Flexible Hinge Domain
CP439_RS15965	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CP439_RS15965	SM01232	CP439_RS15965
CP439_RS15975	SM00358	Double-stranded RNA binding motif
CP439_RS15975	SM00535	Ribonuclease III family
CP439_RS15990	SM00824	Thioesterase
CP439_RS16005	SM00822	CP439_RS16005
CP439_RS16005	SM00823	Phosphopantetheine attachment site
CP439_RS16005	SM00825	Beta-ketoacyl synthase
CP439_RS16005	SM00826	CP439_RS16005
CP439_RS16005	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CP439_RS16005	SM01294	CP439_RS16005
CP439_RS16010	SM00822	CP439_RS16010
CP439_RS16010	SM00823	Phosphopantetheine attachment site
CP439_RS16010	SM00825	Beta-ketoacyl synthase
CP439_RS16010	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CP439_RS16010	SM01294	CP439_RS16010
CP439_RS16015	SM00822	CP439_RS16015
CP439_RS16015	SM00823	Phosphopantetheine attachment site
CP439_RS16015	SM00825	Beta-ketoacyl synthase
CP439_RS16015	SM00826	CP439_RS16015
CP439_RS16015	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CP439_RS16015	SM00829	Enoylreductase
CP439_RS16020	SM00822	CP439_RS16020
CP439_RS16020	SM00823	Phosphopantetheine attachment site
CP439_RS16020	SM00825	Beta-ketoacyl synthase
CP439_RS16020	SM00826	CP439_RS16020
CP439_RS16020	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CP439_RS16025	SM00823	Phosphopantetheine attachment site
CP439_RS16025	SM00825	Beta-ketoacyl synthase
CP439_RS16025	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CP439_RS16030	SM00382	ATPases associated with a variety of cellular activities
CP439_RS16050	SM00822	CP439_RS16050
CP439_RS16050	SM00823	Phosphopantetheine attachment site
CP439_RS16050	SM00825	Beta-ketoacyl synthase
CP439_RS16050	SM00826	CP439_RS16050
CP439_RS16050	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CP439_RS16050	SM00829	Enoylreductase
CP439_RS16085	SM00822	CP439_RS16085
CP439_RS16085	SM00823	Phosphopantetheine attachment site
CP439_RS16085	SM00826	CP439_RS16085
CP439_RS16085	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CP439_RS16085	SM00829	Enoylreductase
CP439_RS16085	SM01294	CP439_RS16085
CP439_RS16090	SM00825	Beta-ketoacyl synthase
CP439_RS16095	SM00823	Phosphopantetheine attachment site
CP439_RS16210	SM00878	Biotin carboxylase C-terminal domain
CP439_RS16215	SM00756	CP439_RS16215
CP439_RS16245	SM00487	DEAD-like helicases superfamily
CP439_RS16245	SM00490	helicase superfamily c-terminal domain
CP439_RS16250	SM01120	CP439_RS16250
CP439_RS16250	SM01121	CP439_RS16250
CP439_RS16265	SM00986	Uracil DNA glycosylase superfamily
CP439_RS16265	SM00987	UreE urease accessory protein, C-terminal domain 
CP439_RS16280	SM00857	Resolvase, N terminal domain
CP439_RS16310	SM00855	Phosphoglycerate mutase family
CP439_RS16315	SM00411	bacterial (prokaryotic) histone like domain
CP439_RS16330	SM00346	helix_turn_helix isocitrate lyase regulation
CP439_RS16370	SM01329	CP439_RS16370
CP439_RS16395	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CP439_RS16440	SM00903	Flavin reductase like domain
CP439_RS16450	SM00845	GatB domain
CP439_RS16475	SM00292	breast cancer carboxy-terminal domain
CP439_RS16475	SM00532	Ligase N family
CP439_RS16545	SM00563	Phosphate acyltransferases
CP439_RS16555	SM00893	Electron transfer flavoprotein domain
CP439_RS16560	SM00893	Electron transfer flavoprotein domain
CP439_RS16625	SM00382	ATPases associated with a variety of cellular activities
CP439_RS16650	SM00829	Enoylreductase
CP439_RS16715	SM00822	CP439_RS16715
CP439_RS16735	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CP439_RS16735	SM00895	CP439_RS16735
CP439_RS16810	SM00507	HNH nucleases
CP439_RS16840	SM00220	Serine/Threonine protein kinases, catalytic domain
CP439_RS16850	SM00342	helix_turn_helix, arabinose operon control protein
CP439_RS16865	SM00822	CP439_RS16865
CP439_RS16870	SM00829	Enoylreductase
CP439_RS16970	SM00382	ATPases associated with a variety of cellular activities
CP439_RS16985	SM00937	CP439_RS16985
CP439_RS17005	SM00729	Elongator protein 3, MiaB family, Radical SAM
CP439_RS17050	SM00450	Rhodanese Homology Domain
CP439_RS17090	SM00862	Transcriptional regulatory protein, C terminal
CP439_RS17090	SM01043	Bacterial transcriptional activator domain
CP439_RS17135	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CP439_RS17135	SM00387	Histidine kinase-like ATPases
CP439_RS17140	SM00421	helix_turn_helix, Lux Regulon
CP439_RS17140	SM00448	cheY-homologous receiver domain
CP439_RS17195	SM00829	Enoylreductase
CP439_RS17205	SM00448	cheY-homologous receiver domain
CP439_RS17240	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
CP439_RS17245	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CP439_RS17245	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
CP439_RS17415	SM00530	Helix-turn-helix XRE-family like proteins 
CP439_RS17435	SM00953	CP439_RS17435
CP439_RS17515	SM00341	Helicase and RNase D C-terminal
CP439_RS17565	SM00450	Rhodanese Homology Domain
CP439_RS17570	SM00235	Zinc-dependent metalloprotease
CP439_RS17595	SM00487	DEAD-like helicases superfamily
CP439_RS17595	SM00490	helicase superfamily c-terminal domain
CP439_RS17610	SM00855	Phosphoglycerate mutase family
CP439_RS17630	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CP439_RS17640	SM00387	Histidine kinase-like ATPases
CP439_RS17755	SM00100	Cyclic nucleotide-monophosphate binding domain
CP439_RS17760	SM00957	SecA DEAD-like domain
CP439_RS17760	SM00958	SecA preprotein cross-linking domain
CP439_RS17780	SM00909	Sporulation and spore germination
CP439_RS17785	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CP439_RS17785	SM00387	Histidine kinase-like ATPases
CP439_RS17785	SM00388	His Kinase A (phosphoacceptor) domain
CP439_RS17790	SM00448	cheY-homologous receiver domain
CP439_RS17790	SM00862	Transcriptional regulatory protein, C terminal
CP439_RS17800	SM00996	S-adenosyl-L-homocysteine hydrolase
CP439_RS17800	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
CP439_RS17935	SM00947	Carbonic anhydrase
CP439_RS17945	SM01001	AIR carboxylase
CP439_RS17950	SM01209	CP439_RS17950
CP439_RS17985	SM00450	Rhodanese Homology Domain
CP439_RS17995	SM00878	Biotin carboxylase C-terminal domain
CP439_RS18025	SM00344	helix_turn_helix ASNC type
CP439_RS18030	SM01150	CP439_RS18030
CP439_RS18050	SM00382	ATPases associated with a variety of cellular activities
CP439_RS18050	SM00487	DEAD-like helicases superfamily
CP439_RS18050	SM00490	helicase superfamily c-terminal domain
CP439_RS18055	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CP439_RS18055	SM01232	CP439_RS18055
CP439_RS18150	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
CP439_RS18255	SM00422	helix_turn_helix, mercury resistance
CP439_RS18275	SM01329	CP439_RS18275
CP439_RS18400	SM00240	Forkhead associated domain
CP439_RS18420	SM00960	Roadblock/LC7 domain
CP439_RS18425	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CP439_RS18425	SM00387	Histidine kinase-like ATPases
CP439_RS18450	SM00481	DNA polymerase alpha chain like domain
CP439_RS18500	SM00861	Transketolase, pyrimidine binding domain
CP439_RS18550	SM00855	Phosphoglycerate mutase family
CP439_RS18555	SM00822	CP439_RS18555
CP439_RS18660	SM01240	CP439_RS18660
CP439_RS18665	SM00116	Domain in cystathionine beta-synthase and other proteins.
CP439_RS18665	SM01240	CP439_RS18665
CP439_RS18700	SM00883	Chaperonin 10 Kd subunit
CP439_RS18725	SM01005	Alanine racemase, C-terminal domain
CP439_RS18750	SM00382	ATPases associated with a variety of cellular activities
CP439_RS18860	SM00382	ATPases associated with a variety of cellular activities
CP439_RS18880	SM01110	CP439_RS18880
CP439_RS18885	SM01110	CP439_RS18885
CP439_RS18915	SM00662	RNA polymerases D
CP439_RS18920	SM00363	S4 RNA-binding domain
CP439_RS18920	SM01390	CP439_RS18920
CP439_RS18990	SM00835	Cupin
CP439_RS19055	SM00822	CP439_RS19055
CP439_RS19145	SM00822	CP439_RS19145
CP439_RS19320	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CP439_RS19385	SM00822	CP439_RS19385
CP439_RS19405	SM00882	Coenzyme A transferase
CP439_RS19410	SM00882	Coenzyme A transferase
CP439_RS19415	SM01240	CP439_RS19415
CP439_RS19495	SM00903	Flavin reductase like domain
CP439_RS19535	SM00354	helix_turn _helix lactose operon repressor
CP439_RS19555	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CP439_RS19560	SM00840	CP439_RS19560
CP439_RS19575	SM01058	CarD-like/TRCF domain
CP439_RS19585	SM00382	ATPases associated with a variety of cellular activities
CP439_RS19600	SM00947	Carbonic anhydrase
CP439_RS19605	SM00478	endonuclease III
CP439_RS19605	SM00525	CP439_RS19605
CP439_RS19630	SM00644	CP439_RS19630
CP439_RS19640	SM00382	ATPases associated with a variety of cellular activities
CP439_RS19640	SM01086	C-terminal, D2-small domain, of ClpB protein
CP439_RS19690	SM00905	Dihydroneopterin aldolase
CP439_RS19705	SM00382	ATPases associated with a variety of cellular activities
CP439_RS19885	SM00382	ATPases associated with a variety of cellular activities
CP439_RS19890	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
CP439_RS19890	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CP439_RS19895	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CP439_RS19895	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CP439_RS19895	SM00493	CP439_RS19895
CP439_RS19905	SM00357	Cold shock protein domain
CP439_RS19910	SM00487	DEAD-like helicases superfamily
CP439_RS19910	SM00490	helicase superfamily c-terminal domain
CP439_RS19995	SM00382	ATPases associated with a variety of cellular activities
CP439_RS20055	SM00478	endonuclease III
CP439_RS20055	SM00525	CP439_RS20055
CP439_RS20065	SM00100	Cyclic nucleotide-monophosphate binding domain
CP439_RS20065	SM00419	helix_turn_helix, cAMP Regulatory protein
CP439_RS20070	SM00849	Metallo-beta-lactamase superfamily
CP439_RS20100	SM00740	CP439_RS20100
CP439_RS20255	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CP439_RS20265	SM00917	LeuA allosteric (dimerisation) domain
CP439_RS20270	SM00479	CP439_RS20270
CP439_RS20290	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CP439_RS20290	SM00493	CP439_RS20290
CP439_RS20300	SM00646	CP439_RS20300
CP439_RS20320	SM00382	ATPases associated with a variety of cellular activities
CP439_RS20365	SM00100	Cyclic nucleotide-monophosphate binding domain
CP439_RS20405	SM00342	helix_turn_helix, arabinose operon control protein
CP439_RS20440	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CP439_RS20520	SM00382	ATPases associated with a variety of cellular activities
CP439_RS20540	SM00849	Metallo-beta-lactamase superfamily
CP439_RS20550	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CP439_RS20550	SM00387	Histidine kinase-like ATPases
CP439_RS20550	SM00388	His Kinase A (phosphoacceptor) domain
CP439_RS20555	SM00448	cheY-homologous receiver domain
CP439_RS20555	SM00862	Transcriptional regulatory protein, C terminal
CP439_RS20635	SM00829	Enoylreductase
CP439_RS20655	SM00382	ATPases associated with a variety of cellular activities
CP439_RS20750	SM00823	Phosphopantetheine attachment site
CP439_RS20750	SM00825	Beta-ketoacyl synthase
CP439_RS20750	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CP439_RS20760	SM01110	CP439_RS20760
CP439_RS20785	SM00014	Acid phosphatase homologues
CP439_RS20805	SM00701	Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme.
CP439_RS20830	SM00563	Phosphate acyltransferases
CP439_RS20835	SM00563	Phosphate acyltransferases
CP439_RS20840	SM00563	Phosphate acyltransferases
CP439_RS20885	SM00822	CP439_RS20885
CP439_RS20885	SM00823	Phosphopantetheine attachment site
CP439_RS20885	SM00825	Beta-ketoacyl synthase
CP439_RS20885	SM00826	CP439_RS20885
CP439_RS20885	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CP439_RS20885	SM00829	Enoylreductase
CP439_RS20905	SM00857	Resolvase, N terminal domain
CP439_RS20930	SM00342	helix_turn_helix, arabinose operon control protein
CP439_RS20955	SM00855	Phosphoglycerate mutase family
CP439_RS21075	SM00481	DNA polymerase alpha chain like domain
CP439_RS21140	SM00382	ATPases associated with a variety of cellular activities
CP439_RS21160	SM00382	ATPases associated with a variety of cellular activities
CP439_RS21225	SM00382	ATPases associated with a variety of cellular activities
CP439_RS21340	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CP439_RS21385	SM00646	CP439_RS21385
CP439_RS21400	SM00470	ParB-like nuclease domain
CP439_RS21415	SM00393	Putative single-stranded nucleic acids-binding domain
CP439_RS21425	SM01234	CP439_RS21425
