locus-tag class description CP478_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix CP478_RS00005 PF00308 Bacterial dnaA protein CP478_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain CP478_RS00010 PF02767 DNA polymerase III beta subunit, central domain CP478_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain CP478_RS00015 PF02463 RecF/RecN/SMC N terminal domain CP478_RS00020 PF05258 Dna[CI] antecedent, DciA CP478_RS00025 PF01751 Toprim domain CP478_RS00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CP478_RS00025 PF00986 DNA gyrase B subunit, carboxyl terminus CP478_RS00025 PF00204 DNA gyrase B CP478_RS00030 PF03989 DNA gyrase C-terminal domain, beta-propeller CP478_RS00030 PF00521 DNA gyrase/topoisomerase IV, subunit A CP478_RS00035 PF12089 Transmembrane domain of unknown function (DUF3566) CP478_RS00055 PF10814 Cell wall synthesis protein CwsA CP478_RS00060 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CP478_RS00065 PF10756 Bacterial PH domain CP478_RS00070 PF06781 Cell division protein CrgA CP478_RS00080 PF00117 Glutamine amidotransferase class-I CP478_RS00085 PF00069 Protein kinase domain CP478_RS00085 PF03793 PASTA domain CP478_RS00090 PF00069 Protein kinase domain CP478_RS00095 PF00905 Penicillin binding protein transpeptidase domain CP478_RS00100 PF01098 Cell cycle protein CP478_RS00110 PF16697 Inner membrane component of T3SS, cytoplasmic domain CP478_RS00115 PF12401 Protein of unknown function (DUF2662) CP478_RS00115 PF00498 FHA domain CP478_RS00125 PF03060 Nitronate monooxygenase CP478_RS00130 PF02467 Transcription factor WhiB CP478_RS00135 PF01381 Helix-turn-helix CP478_RS00140 PF00877 NlpC/P60 family CP478_RS00145 PF10774 Domain of unknown function (DUF4226) CP478_RS00150 PF10774 Domain of unknown function (DUF4226) CP478_RS00155 PF10824 Excreted virulence factor EspC, type VII ESX diderm CP478_RS00160 PF10904 Protein of unknown function (DUF2694) CP478_RS00165 PF18646 Family of unknown function (DUF5632) CP478_RS00165 PF18645 Family of unknown function (DUF5631) CP478_RS00190 PF00550 Phosphopantetheine attachment site CP478_RS00195 PF12680 SnoaL-like domain CP478_RS00200 PF00501 AMP-binding enzyme CP478_RS00205 PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain CP478_RS00205 PF08608 Wyosine base formation CP478_RS00210 PF07690 Major Facilitator Superfamily CP478_RS00215 PF02622 Uncharacterized ACR, COG1678 CP478_RS00225 PF10738 Probable lipoprotein LpqN CP478_RS00230 PF08264 Anticodon-binding domain of tRNA CP478_RS00230 PF13603 Leucyl-tRNA synthetase, Domain 2 CP478_RS00230 PF09334 tRNA synthetases class I (M) CP478_RS00240 PF00392 Bacterial regulatory proteins, gntR family CP478_RS00245 PF00296 Luciferase-like monooxygenase CP478_RS00250 PF12697 Alpha/beta hydrolase family CP478_RS00255 PF01658 Myo-inositol-1-phosphate synthase CP478_RS00265 PF08044 Domain of unknown function (DUF1707) CP478_RS00270 PF17249 Family of unknown function (DUF5318) CP478_RS00275 PF00905 Penicillin binding protein transpeptidase domain CP478_RS00275 PF00912 Transglycosylase CP478_RS00285 PF01965 DJ-1/PfpI family CP478_RS00290 PF01250 Ribosomal protein S6 CP478_RS00295 PF00436 Single-strand binding protein family CP478_RS00300 PF01084 Ribosomal protein S18 CP478_RS00305 PF01281 Ribosomal protein L9, N-terminal domain CP478_RS00305 PF03948 Ribosomal protein L9, C-terminal domain CP478_RS00315 PF14528 LAGLIDADG-like domain CP478_RS00315 PF03796 DnaB-like helicase C terminal domain CP478_RS00315 PF00772 DnaB-like helicase N terminal domain CP478_RS00340 PF00553 Cellulose binding domain CP478_RS00340 PF01341 Glycosyl hydrolases family 6 CP478_RS00345 PF01565 FAD binding domain CP478_RS00345 PF08031 Berberine and berberine like CP478_RS00355 PF03699 Uncharacterised protein family (UPF0182) CP478_RS00365 PF01850 PIN domain CP478_RS00370 PF03971 Monomeric isocitrate dehydrogenase CP478_RS00375 PF00440 Bacterial regulatory proteins, tetR family CP478_RS00385 PF03315 Serine dehydratase beta chain CP478_RS00385 PF03313 Serine dehydratase alpha chain CP478_RS00390 PF00464 Serine hydroxymethyltransferase CP478_RS00395 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CP478_RS00405 PF00005 ABC transporter CP478_RS00405 PF00027 Cyclic nucleotide-binding domain CP478_RS00410 PF01979 Amidohydrolase family CP478_RS00415 PF00155 Aminotransferase class I and II CP478_RS00430 PF00440 Bacterial regulatory proteins, tetR family CP478_RS00445 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus CP478_RS00450 PF12900 Pyridoxamine 5'-phosphate oxidase CP478_RS00460 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CP478_RS00465 PF00361 Proton-conducting membrane transporter CP478_RS00470 PF00146 NADH dehydrogenase CP478_RS00480 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CP478_RS00480 PF00361 Proton-conducting membrane transporter CP478_RS00485 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CP478_RS00485 PF00374 Nickel-dependent hydrogenase CP478_RS00485 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CP478_RS00490 PF10604 Polyketide cyclase / dehydrase and lipid transport CP478_RS00495 PF08241 Methyltransferase domain CP478_RS00500 PF09900 Predicted membrane protein (DUF2127) CP478_RS00510 PF01048 Phosphorylase superfamily CP478_RS00515 PF00403 Heavy-metal-associated domain CP478_RS00520 PF13490 Putative zinc-finger CP478_RS00530 PF02720 Domain of unknown function (DUF222) CP478_RS00535 PF00823 PPE family CP478_RS00540 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CP478_RS00545 PF10862 FcoT-like thioesterase domain CP478_RS00550 PF00501 AMP-binding enzyme CP478_RS00550 PF13193 AMP-binding enzyme C-terminal domain CP478_RS00555 PF00550 Phosphopantetheine attachment site CP478_RS00560 PF00975 Thioesterase domain CP478_RS00560 PF00668 Condensation domain CP478_RS00560 PF13193 AMP-binding enzyme C-terminal domain CP478_RS00560 PF00501 AMP-binding enzyme CP478_RS00560 PF00550 Phosphopantetheine attachment site CP478_RS00565 PF05425 Copper resistance protein D CP478_RS00565 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) CP478_RS00570 PF00403 Heavy-metal-associated domain CP478_RS00575 PF00027 Cyclic nucleotide-binding domain CP478_RS00580 PF00830 Ribosomal L28 family CP478_RS00585 PF07683 Cobalamin synthesis protein cobW C-terminal domain CP478_RS00585 PF02492 CobW/HypB/UreG, nucleotide-binding domain CP478_RS00590 PF00689 Cation transporting ATPase, C-terminus CP478_RS00600 PF00934 PE family CP478_RS00610 PF01757 Acyltransferase family CP478_RS00615 PF16363 GDP-mannose 4,6 dehydratase CP478_RS00620 PF13580 SIS domain CP478_RS00630 PF08544 GHMP kinases C terminal CP478_RS00630 PF00288 GHMP kinases N terminal domain CP478_RS00640 PF03734 L,D-transpeptidase catalytic domain CP478_RS00640 PF17964 Bacterial Ig domain CP478_RS00645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CP478_RS00645 PF03466 LysR substrate binding domain CP478_RS00650 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CP478_RS00650 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CP478_RS00650 PF00205 Thiamine pyrophosphate enzyme, central domain CP478_RS00655 PF13193 AMP-binding enzyme C-terminal domain CP478_RS00655 PF00501 AMP-binding enzyme CP478_RS00660 PF00679 Elongation factor G C-terminus CP478_RS00660 PF03764 Elongation factor G, domain IV CP478_RS00660 PF00009 Elongation factor Tu GTP binding domain CP478_RS00660 PF14492 Elongation Factor G, domain II CP478_RS00660 PF03144 Elongation factor Tu domain 2 CP478_RS00685 PF13180 PDZ domain CP478_RS00690 PF00128 Alpha amylase, catalytic domain CP478_RS00690 PF16657 Maltogenic Amylase, C-terminal domain CP478_RS00695 PF18085 Maltokinase N-terminal cap domain CP478_RS00705 PF00756 Putative esterase CP478_RS00710 PF01575 MaoC like domain CP478_RS00715 PF02770 Acyl-CoA dehydrogenase, middle domain CP478_RS00715 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CP478_RS00715 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CP478_RS00720 PF00296 Luciferase-like monooxygenase CP478_RS00725 PF00583 Acetyltransferase (GNAT) family CP478_RS00730 PF00561 alpha/beta hydrolase fold CP478_RS00740 PF00067 Cytochrome P450 CP478_RS00745 PF01625 Peptide methionine sulfoxide reductase CP478_RS00775 PF00654 Voltage gated chloride channel CP478_RS00780 PF00440 Bacterial regulatory proteins, tetR family CP478_RS00785 PF04072 Leucine carboxyl methyltransferase CP478_RS00790 PF04072 Leucine carboxyl methyltransferase CP478_RS00795 PF00171 Aldehyde dehydrogenase family CP478_RS00800 PF00106 short chain dehydrogenase CP478_RS00805 PF02801 Beta-ketoacyl synthase, C-terminal domain CP478_RS00805 PF08659 KR domain CP478_RS00805 PF00698 Acyl transferase domain CP478_RS00805 PF16197 Ketoacyl-synthetase C-terminal extension CP478_RS00805 PF00550 Phosphopantetheine attachment site CP478_RS00805 PF14765 Polyketide synthase dehydratase CP478_RS00805 PF00107 Zinc-binding dehydrogenase CP478_RS00805 PF08240 Alcohol dehydrogenase GroES-like domain CP478_RS00805 PF00109 Beta-ketoacyl synthase, N-terminal domain CP478_RS00810 PF00823 PPE family CP478_RS00810 PF08237 PE-PPE domain CP478_RS00820 PF08237 PE-PPE domain CP478_RS00820 PF00823 PPE family CP478_RS00825 PF00823 PPE family CP478_RS00825 PF08237 PE-PPE domain CP478_RS00830 PF00934 PE family CP478_RS00835 PF13350 Tyrosine phosphatase family CP478_RS00840 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CP478_RS00840 PF02770 Acyl-CoA dehydrogenase, middle domain CP478_RS00840 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CP478_RS00850 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CP478_RS00850 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CP478_RS00855 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CP478_RS00855 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CP478_RS00855 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CP478_RS00860 PF02233 NAD(P) transhydrogenase beta subunit CP478_RS00870 PF08362 YcdC-like protein, C-terminal region CP478_RS00870 PF00440 Bacterial regulatory proteins, tetR family CP478_RS00875 PF00934 PE family CP478_RS00875 PF08237 PE-PPE domain CP478_RS00880 PF08237 PE-PPE domain CP478_RS00880 PF00934 PE family CP478_RS00885 PF01565 FAD binding domain CP478_RS00885 PF02913 FAD linked oxidases, C-terminal domain CP478_RS00890 PF08240 Alcohol dehydrogenase GroES-like domain CP478_RS00890 PF00107 Zinc-binding dehydrogenase CP478_RS00915 PF00501 AMP-binding enzyme CP478_RS00915 PF13193 AMP-binding enzyme C-terminal domain CP478_RS00920 PF02405 Permease MlaE CP478_RS00925 PF02405 Permease MlaE CP478_RS00950 PF02470 MlaD protein CP478_RS00965 PF06271 RDD family CP478_RS00990 PF02678 Pirin CP478_RS00990 PF17954 Quercetinase C-terminal cupin domain CP478_RS00995 PF04542 Sigma-70 region 2 CP478_RS00995 PF12680 SnoaL-like domain CP478_RS00995 PF08281 Sigma-70, region 4 CP478_RS01000 PF12146 Serine aminopeptidase, S33 CP478_RS01015 PF00933 Glycosyl hydrolase family 3 N terminal domain CP478_RS01015 PF14310 Fibronectin type III-like domain CP478_RS01015 PF01915 Glycosyl hydrolase family 3 C-terminal domain CP478_RS01025 PF01596 O-methyltransferase CP478_RS01035 PF00920 Dehydratase family CP478_RS01040 PF02583 Metal-sensitive transcriptional repressor CP478_RS01045 PF07690 Major Facilitator Superfamily CP478_RS01050 PF03734 L,D-transpeptidase catalytic domain CP478_RS01050 PF17964 Bacterial Ig domain CP478_RS01060 PF00005 ABC transporter CP478_RS01060 PF00664 ABC transporter transmembrane region CP478_RS01070 PF00440 Bacterial regulatory proteins, tetR family CP478_RS01075 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CP478_RS01075 PF00384 Molybdopterin oxidoreductase CP478_RS01075 PF10518 TAT (twin-arginine translocation) pathway signal sequence CP478_RS01075 PF01568 Molydopterin dinucleotide binding domain CP478_RS01080 PF05649 Peptidase family M13 CP478_RS01080 PF01431 Peptidase family M13 CP478_RS01100 PF03176 MMPL family CP478_RS01105 PF16525 Haemophore, haem-binding CP478_RS01115 PF01594 AI-2E family transporter CP478_RS01120 PF03176 MMPL family CP478_RS01130 PF02390 Putative methyltransferase CP478_RS01145 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain CP478_RS01145 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain CP478_RS01160 PF00501 AMP-binding enzyme CP478_RS01160 PF13193 AMP-binding enzyme C-terminal domain CP478_RS01175 PF07859 alpha/beta hydrolase fold CP478_RS01180 PF00174 Oxidoreductase molybdopterin binding domain CP478_RS01190 PF07859 alpha/beta hydrolase fold CP478_RS01195 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain CP478_RS01195 PF06974 Protein of unknown function (DUF1298) CP478_RS01200 PF00378 Enoyl-CoA hydratase/isomerase CP478_RS01205 PF00171 Aldehyde dehydrogenase family CP478_RS01210 PF08241 Methyltransferase domain CP478_RS01215 PF08323 Starch synthase catalytic domain CP478_RS01215 PF00534 Glycosyl transferases group 1 CP478_RS01235 PF01850 PIN domain CP478_RS01245 PF02126 Phosphotriesterase family CP478_RS01255 PF17754 MftR C-terminal domain CP478_RS01255 PF00440 Bacterial regulatory proteins, tetR family CP478_RS01260 PF00268 Ribonucleotide reductase, small chain CP478_RS01265 PF00171 Aldehyde dehydrogenase family CP478_RS01275 PF11847 Alpha-(1->3)-arabinofuranosyltransferase CP478_RS01280 PF11021 Protein of unknown function (DUF2613) CP478_RS01285 PF00933 Glycosyl hydrolase family 3 N terminal domain CP478_RS01300 PF01850 PIN domain CP478_RS01305 PF01575 MaoC like domain CP478_RS01315 PF02803 Thiolase, C-terminal domain CP478_RS01315 PF00108 Thiolase, N-terminal domain CP478_RS01320 PF02770 Acyl-CoA dehydrogenase, middle domain CP478_RS01320 PF12806 Acetyl-CoA dehydrogenase C-terminal like CP478_RS01320 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CP478_RS01320 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CP478_RS01325 PF01613 Flavin reductase like domain CP478_RS01335 PF13183 4Fe-4S dicluster domain CP478_RS01335 PF13085 2Fe-2S iron-sulfur cluster binding domain CP478_RS01340 PF00890 FAD binding domain CP478_RS01340 PF02910 Fumarate reductase flavoprotein C-term CP478_RS01360 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CP478_RS01360 PF04324 BFD-like [2Fe-2S] binding domain CP478_RS01360 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CP478_RS01360 PF13806 Rieske-like [2Fe-2S] domain CP478_RS01360 PF07992 Pyridine nucleotide-disulphide oxidoreductase CP478_RS01360 PF18267 Rubredoxin NAD+ reductase C-terminal domain CP478_RS01370 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CP478_RS01375 PF07685 CobB/CobQ-like glutamine amidotransferase domain CP478_RS01375 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CP478_RS01380 PF00823 PPE family CP478_RS01410 PF07690 Major Facilitator Superfamily CP478_RS01420 PF02626 Carboxyltransferase domain, subdomain A and B CP478_RS01435 PF05378 Hydantoinase/oxoprolinase N-terminal region CP478_RS01435 PF01968 Hydantoinase/oxoprolinase CP478_RS01440 PF07690 Major Facilitator Superfamily CP478_RS01445 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system CP478_RS01455 PF13193 AMP-binding enzyme C-terminal domain CP478_RS01455 PF00501 AMP-binding enzyme CP478_RS01460 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CP478_RS01460 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CP478_RS01460 PF02770 Acyl-CoA dehydrogenase, middle domain CP478_RS01475 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CP478_RS01485 PF09995 Uncharacterized protein conserved in bacteria (DUF2236) CP478_RS01490 PF01850 PIN domain CP478_RS01495 PF01402 Ribbon-helix-helix protein, copG family CP478_RS01505 PF00934 PE family CP478_RS01505 PF00934 PE family CP478_RS01515 PF00823 PPE family CP478_RS01520 PF04072 Leucine carboxyl methyltransferase CP478_RS01525 PF00004 ATPase family associated with various cellular activities (AAA) CP478_RS01525 PF17866 AAA lid domain CP478_RS01530 PF05108 Type VII secretion system ESX-1, transport TM domain B CP478_RS01535 PF01580 FtsK/SpoIIIE family CP478_RS01540 PF00934 PE family CP478_RS01545 PF00823 PPE family CP478_RS01550 PF06013 Proteins of 100 residues with WXG CP478_RS01555 PF06013 Proteins of 100 residues with WXG CP478_RS01560 PF14011 EspG family CP478_RS01565 PF08817 WXG100 protein secretion system (Wss), protein YukD CP478_RS01570 PF00082 Subtilase family CP478_RS01575 PF11203 Putative type VII ESX secretion system translocon, EccE CP478_RS01590 PF09037 Stf0 sulphotransferase CP478_RS01595 PF00884 Sulfatase CP478_RS01600 PF00934 PE family CP478_RS01605 PF01402 Ribbon-helix-helix protein, copG family CP478_RS01615 PF01402 Ribbon-helix-helix protein, copG family CP478_RS01620 PF01850 PIN domain CP478_RS01630 PF00106 short chain dehydrogenase CP478_RS01635 PF00823 PPE family CP478_RS01635 PF08237 PE-PPE domain CP478_RS01640 PF00881 Nitroreductase family CP478_RS01650 PF01569 PAP2 superfamily CP478_RS01660 PF13577 SnoaL-like domain CP478_RS01690 PF02426 Muconolactone delta-isomerase CP478_RS01695 PF03009 Glycerophosphoryl diester phosphodiesterase family CP478_RS01710 PF01470 Pyroglutamyl peptidase CP478_RS01720 PF00692 dUTPase CP478_RS01725 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CP478_RS01725 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CP478_RS01725 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CP478_RS01730 PF02585 GlcNAc-PI de-N-acetylase CP478_RS01735 PF01022 Bacterial regulatory protein, arsR family CP478_RS01745 PF08241 Methyltransferase domain CP478_RS01750 PF00067 Cytochrome P450 CP478_RS01760 PF01209 ubiE/COQ5 methyltransferase family CP478_RS01770 PF07992 Pyridine nucleotide-disulphide oxidoreductase CP478_RS01785 PF00483 Nucleotidyl transferase CP478_RS01790 PF00934 PE family CP478_RS01795 PF02720 Domain of unknown function (DUF222) CP478_RS01805 PF00155 Aminotransferase class I and II CP478_RS01810 PF02754 Cysteine-rich domain CP478_RS01810 PF13183 4Fe-4S dicluster domain CP478_RS01810 PF02665 Nitrate reductase gamma subunit CP478_RS01830 PF00350 Dynamin family CP478_RS01835 PF00350 Dynamin family CP478_RS01850 PF00324 Amino acid permease CP478_RS01870 PF00012 Hsp70 protein CP478_RS01875 PF01025 GrpE CP478_RS01880 PF00226 DnaJ domain CP478_RS01880 PF01556 DnaJ C terminal domain CP478_RS01880 PF00684 DnaJ central domain CP478_RS01885 PF13411 MerR HTH family regulatory protein CP478_RS01910 PF00709 Adenylosuccinate synthetase CP478_RS01935 PF01769 Divalent cation transporter CP478_RS01935 PF00571 CBS domain CP478_RS01935 PF03448 MgtE intracellular N domain CP478_RS01940 PF01116 Fructose-bisphosphate aldolase class-II CP478_RS01945 PF09335 SNARE associated Golgi protein CP478_RS01980 PF12804 MobA-like NTP transferase domain CP478_RS01990 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CP478_RS01990 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CP478_RS01995 PF01799 [2Fe-2S] binding domain CP478_RS01995 PF00111 2Fe-2S iron-sulfur cluster binding domain CP478_RS02000 PF03450 CO dehydrogenase flavoprotein C-terminal domain CP478_RS02000 PF00941 FAD binding domain in molybdopterin dehydrogenase CP478_RS02010 PF03466 LysR substrate binding domain CP478_RS02010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CP478_RS02020 PF07311 Dodecin CP478_RS02035 PF00156 Phosphoribosyl transferase domain CP478_RS02045 PF02861 Clp amino terminal domain, pathogenicity island component CP478_RS02045 PF10431 C-terminal, D2-small domain, of ClpB protein CP478_RS02045 PF07724 AAA domain (Cdc48 subfamily) CP478_RS02045 PF00004 ATPase family associated with various cellular activities (AAA) CP478_RS02045 PF17871 AAA lid domain CP478_RS02050 PF00111 2Fe-2S iron-sulfur cluster binding domain CP478_RS02050 PF00175 Oxidoreductase NAD-binding domain CP478_RS02050 PF00970 Oxidoreductase FAD-binding domain CP478_RS02055 PF00196 Bacterial regulatory proteins, luxR family CP478_RS02060 PF00823 PPE family CP478_RS02060 PF12484 Polymorphic PE/PPE proteins C terminal CP478_RS02070 PF01370 NAD dependent epimerase/dehydratase family CP478_RS02070 PF02222 ATP-grasp domain CP478_RS02080 PF01053 Cys/Met metabolism PLP-dependent enzyme CP478_RS02085 PF07992 Pyridine nucleotide-disulphide oxidoreductase CP478_RS02090 PF02720 Domain of unknown function (DUF222) CP478_RS02135 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CP478_RS02135 PF02770 Acyl-CoA dehydrogenase, middle domain CP478_RS02135 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CP478_RS02145 PF03176 MMPL family CP478_RS02150 PF05423 Mycobacterium membrane protein CP478_RS02155 PF00501 AMP-binding enzyme CP478_RS02160 PF16197 Ketoacyl-synthetase C-terminal extension CP478_RS02160 PF00698 Acyl transferase domain CP478_RS02160 PF08659 KR domain CP478_RS02160 PF02801 Beta-ketoacyl synthase, C-terminal domain CP478_RS02160 PF00109 Beta-ketoacyl synthase, N-terminal domain CP478_RS02160 PF08240 Alcohol dehydrogenase GroES-like domain CP478_RS02160 PF14765 Polyketide synthase dehydratase CP478_RS02160 PF00550 Phosphopantetheine attachment site CP478_RS02160 PF08659 KR domain CP478_RS02160 PF02801 Beta-ketoacyl synthase, C-terminal domain CP478_RS02160 PF00550 Phosphopantetheine attachment site CP478_RS02160 PF00109 Beta-ketoacyl synthase, N-terminal domain CP478_RS02160 PF08240 Alcohol dehydrogenase GroES-like domain CP478_RS02160 PF00698 Acyl transferase domain CP478_RS02160 PF16197 Ketoacyl-synthetase C-terminal extension CP478_RS02160 PF14765 Polyketide synthase dehydratase CP478_RS02165 PF00753 Metallo-beta-lactamase superfamily CP478_RS02170 PF00296 Luciferase-like monooxygenase CP478_RS02175 PF01515 Phosphate acetyl/butaryl transferase CP478_RS02175 PF07085 DRTGG domain CP478_RS02180 PF00871 Acetokinase family CP478_RS02185 PF00069 Protein kinase domain CP478_RS02185 PF16919 Protein kinase G rubredoxin domain CP478_RS02185 PF16918 Protein kinase G tetratricopeptide repeat CP478_RS02190 PF00497 Bacterial extracellular solute-binding proteins, family 3 CP478_RS02200 PF00293 NUDIX domain CP478_RS02205 PF02581 Thiamine monophosphate synthase CP478_RS02210 PF01266 FAD dependent oxidoreductase CP478_RS02220 PF05690 Thiazole biosynthesis protein ThiG CP478_RS02230 PF04389 Peptidase family M28 CP478_RS02230 PF02225 PA domain CP478_RS02250 PF08543 Phosphomethylpyrimidine kinase CP478_RS02255 PF13667 ThiC-associated domain CP478_RS02255 PF01964 Radical SAM ThiC family CP478_RS02265 PF00689 Cation transporting ATPase, C-terminus CP478_RS02285 PF01327 Polypeptide deformylase CP478_RS02300 PF00080 Copper/zinc superoxide dismutase (SODC) CP478_RS02305 PF04107 Glutamate-cysteine ligase family 2(GCS2) CP478_RS02315 PF17862 AAA+ lid domain CP478_RS02315 PF01434 Peptidase family M41 CP478_RS02315 PF00004 ATPase family associated with various cellular activities (AAA) CP478_RS02320 PF01066 CDP-alcohol phosphatidyltransferase CP478_RS02325 PF02666 Phosphatidylserine decarboxylase CP478_RS02330 PF00994 Probable molybdopterin binding domain CP478_RS02330 PF03454 MoeA C-terminal region (domain IV) CP478_RS02330 PF03453 MoeA N-terminal region (domain I and II) CP478_RS02335 PF00106 short chain dehydrogenase CP478_RS02340 PF00118 TCP-1/cpn60 chaperonin family CP478_RS02350 PF00823 PPE family CP478_RS02350 PF01469 Pentapeptide repeats (8 copies) CP478_RS02360 PF10099 Anti-sigma-K factor rskA CP478_RS02365 PF04542 Sigma-70 region 2 CP478_RS02365 PF04545 Sigma-70, region 4 CP478_RS02390 PF03176 MMPL family CP478_RS02395 PF05423 Mycobacterium membrane protein CP478_RS02410 PF00823 PPE family CP478_RS02425 PF00378 Enoyl-CoA hydratase/isomerase CP478_RS02430 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system CP478_RS02440 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CP478_RS02440 PF00326 Prolyl oligopeptidase family CP478_RS02445 PF00171 Aldehyde dehydrogenase family CP478_RS02465 PF07992 Pyridine nucleotide-disulphide oxidoreductase CP478_RS02465 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CP478_RS02480 PF01381 Helix-turn-helix CP478_RS02480 PF06114 IrrE N-terminal-like domain CP478_RS02480 PF09856 Predicted transcriptional regulator (DUF2083) CP478_RS02485 PF01643 Acyl-ACP thioesterase CP478_RS02490 PF00463 Isocitrate lyase family CP478_RS02495 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CP478_RS02495 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CP478_RS02520 PF00440 Bacterial regulatory proteins, tetR family CP478_RS02525 PF04286 Protein of unknown function (DUF445) CP478_RS02530 PF01381 Helix-turn-helix CP478_RS02540 PF10724 Protein of unknown function (DUF2516) CP478_RS02545 PF10783 Protein of unknown function (DUF2599) CP478_RS02550 PF01791 DeoC/LacD family aldolase CP478_RS02555 PF11209 Protein of unknown function (DUF2993) CP478_RS02560 PF00795 Carbon-nitrogen hydrolase CP478_RS02565 PF10698 Protein of unknown function (DUF2505) CP478_RS02570 PF01565 FAD binding domain CP478_RS02570 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CP478_RS02575 PF17964 Bacterial Ig domain CP478_RS02575 PF03734 L,D-transpeptidase catalytic domain CP478_RS02580 PF00106 short chain dehydrogenase CP478_RS02585 PF00480 ROK family CP478_RS02590 PF00534 Glycosyl transferases group 1 CP478_RS02590 PF13439 Glycosyltransferase Family 4 CP478_RS02595 PF10722 Putative bacterial sensory transduction regulator CP478_RS02600 PF01810 LysE type translocator CP478_RS02605 PF00300 Histidine phosphatase superfamily (branch 1) CP478_RS02610 PF00512 His Kinase A (phospho-acceptor) domain CP478_RS02610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CP478_RS02620 PF00072 Response regulator receiver domain CP478_RS02620 PF00486 Transcriptional regulatory protein, C terminal CP478_RS02625 PF00732 GMC oxidoreductase CP478_RS02625 PF05199 GMC oxidoreductase CP478_RS02640 PF07729 FCD domain CP478_RS02640 PF00392 Bacterial regulatory proteins, gntR family CP478_RS02650 PF02541 Ppx/GppA phosphatase family CP478_RS02660 PF01261 Xylose isomerase-like TIM barrel CP478_RS02670 PF03807 NADP oxidoreductase coenzyme F420-dependent CP478_RS02670 PF14748 Pyrroline-5-carboxylate reductase dimerisation CP478_RS02675 PF12728 Helix-turn-helix domain CP478_RS02680 PF08213 Mitochondrial domain of unknown function (DUF1713) CP478_RS02685 PF01370 NAD dependent epimerase/dehydratase family CP478_RS02690 PF01553 Acyltransferase CP478_RS02700 PF13452 N-terminal half of MaoC dehydratase CP478_RS02710 PF05423 Mycobacterium membrane protein CP478_RS02715 PF03176 MMPL family CP478_RS02720 PF05768 Glutaredoxin-like domain (DUF836) CP478_RS02725 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CP478_RS02725 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CP478_RS02725 PF01488 Shikimate / quinate 5-dehydrogenase CP478_RS02730 PF03900 Porphobilinogen deaminase, C-terminal domain CP478_RS02730 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CP478_RS02735 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CP478_RS02735 PF10414 Sirohaem synthase dimerisation region CP478_RS02735 PF14824 Sirohaem biosynthesis protein central CP478_RS02740 PF00490 Delta-aminolevulinic acid dehydratase CP478_RS02755 PF02720 Domain of unknown function (DUF222) CP478_RS02760 PF01740 STAS domain CP478_RS02765 PF01757 Acyltransferase family CP478_RS02770 PF13472 GDSL-like Lipase/Acylhydrolase family CP478_RS02785 PF08241 Methyltransferase domain CP478_RS02790 PF08241 Methyltransferase domain CP478_RS02795 PF00324 Amino acid permease CP478_RS02805 PF00202 Aminotransferase class-III CP478_RS02810 PF00300 Histidine phosphatase superfamily (branch 1) CP478_RS02820 PF02683 Cytochrome C biogenesis protein transmembrane region CP478_RS02830 PF01578 Cytochrome C assembly protein CP478_RS02835 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CP478_RS02855 PF00934 PE family CP478_RS02860 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CP478_RS02860 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CP478_RS02865 PF01040 UbiA prenyltransferase family CP478_RS02870 PF01048 Phosphorylase superfamily CP478_RS02875 PF01370 NAD dependent epimerase/dehydratase family CP478_RS02890 PF00535 Glycosyl transferase family 2 CP478_RS02905 PF13193 AMP-binding enzyme C-terminal domain CP478_RS02905 PF00501 AMP-binding enzyme CP478_RS02920 PF01384 Phosphate transporter family CP478_RS02930 PF00106 short chain dehydrogenase CP478_RS02935 PF00378 Enoyl-CoA hydratase/isomerase CP478_RS02940 PF01850 PIN domain CP478_RS02945 PF07362 Post-segregation antitoxin CcdA CP478_RS02950 PF13193 AMP-binding enzyme C-terminal domain CP478_RS02950 PF00501 AMP-binding enzyme CP478_RS02955 PF01979 Amidohydrolase family CP478_RS02960 PF18374 Enolase N-terminal domain-like CP478_RS02960 PF13378 Enolase C-terminal domain-like CP478_RS02965 PF12697 Alpha/beta hydrolase family CP478_RS02970 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CP478_RS02980 PF13439 Glycosyltransferase Family 4 CP478_RS02980 PF00534 Glycosyl transferases group 1 CP478_RS02985 PF01209 ubiE/COQ5 methyltransferase family CP478_RS02990 PF05305 Protein of unknown function (DUF732) CP478_RS02995 PF13847 Methyltransferase domain CP478_RS03000 PF01494 FAD binding domain CP478_RS03005 PF00348 Polyprenyl synthetase CP478_RS03010 PF01435 Peptidase family M48 CP478_RS03015 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CP478_RS03015 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CP478_RS03020 PF00743 Flavin-binding monooxygenase-like CP478_RS03025 PF04461 Protein of unknown function (DUF520) CP478_RS03035 PF16864 Dimerisation domain CP478_RS03035 PF00891 O-methyltransferase domain CP478_RS03040 PF00067 Cytochrome P450 CP478_RS03045 PF08940 Domain of unknown function (DUF1918) CP478_RS03050 PF03477 ATP cone domain CP478_RS03050 PF02867 Ribonucleotide reductase, barrel domain CP478_RS03050 PF00317 Ribonucleotide reductase, all-alpha domain CP478_RS03060 PF01738 Dienelactone hydrolase family CP478_RS03060 PF00156 Phosphoribosyl transferase domain CP478_RS03070 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CP478_RS03070 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CP478_RS03075 PF09587 Bacterial capsule synthesis protein PGA_cap CP478_RS03080 PF01494 FAD binding domain CP478_RS03085 PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain CP478_RS03090 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CP478_RS03090 PF18029 Glyoxalase-like domain CP478_RS03095 PF00934 PE family CP478_RS03115 PF01402 Ribbon-helix-helix protein, copG family CP478_RS03120 PF01850 PIN domain CP478_RS03125 PF10738 Probable lipoprotein LpqN CP478_RS03130 PF07971 Glycosyl hydrolase family 92 CP478_RS03130 PF17678 Glycosyl hydrolase family 92 N-terminal domain CP478_RS03140 PF07729 FCD domain CP478_RS03140 PF00392 Bacterial regulatory proteins, gntR family CP478_RS03150 PF02405 Permease MlaE CP478_RS03175 PF02470 MlaD protein CP478_RS03185 PF01850 PIN domain CP478_RS03190 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system CP478_RS03200 PF01850 PIN domain CP478_RS03205 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CP478_RS03210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CP478_RS03215 PF00672 HAMP domain CP478_RS03220 PF00072 Response regulator receiver domain CP478_RS03220 PF00486 Transcriptional regulatory protein, C terminal CP478_RS03235 PF00239 Resolvase, N terminal domain CP478_RS03240 PF07282 Putative transposase DNA-binding domain CP478_RS03240 PF01385 Probable transposase CP478_RS03240 PF12323 Helix-turn-helix domain CP478_RS03250 PF07704 Rv0623-like transcription factor CP478_RS03255 PF01850 PIN domain CP478_RS03290 PF01043 SecA preprotein cross-linking domain CP478_RS03290 PF07516 SecA Wing and Scaffold domain CP478_RS03290 PF02810 SEC-C motif CP478_RS03290 PF07517 SecA DEAD-like domain CP478_RS03315 PF01850 PIN domain CP478_RS03320 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain CP478_RS03320 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain CP478_RS03325 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain CP478_RS03325 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain CP478_RS03330 PF00288 GHMP kinases N terminal domain CP478_RS03330 PF08544 GHMP kinases C terminal CP478_RS03330 PF10509 Galactokinase galactose-binding signature CP478_RS03350 PF07704 Rv0623-like transcription factor CP478_RS03355 PF01850 PIN domain CP478_RS03360 PF09335 SNARE associated Golgi protein CP478_RS03365 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system CP478_RS03370 PF01850 PIN domain CP478_RS03375 PF10442 FIST C domain CP478_RS03375 PF08495 FIST N domain CP478_RS03380 PF13538 UvrD-like helicase C-terminal domain CP478_RS03385 PF13361 UvrD-like helicase C-terminal domain CP478_RS03385 PF12705 PD-(D/E)XK nuclease superfamily CP478_RS03385 PF00580 UvrD/REP helicase N-terminal domain CP478_RS03390 PF17946 RecC C-terminal domain CP478_RS03395 PF00378 Enoyl-CoA hydratase/isomerase CP478_RS03405 PF00753 Metallo-beta-lactamase superfamily CP478_RS03410 PF09957 Bacterial antitoxin of type II TA system, VapB CP478_RS03425 PF00471 Ribosomal protein L33 CP478_RS03430 PF13452 N-terminal half of MaoC dehydratase CP478_RS03435 PF01575 MaoC like domain CP478_RS03440 PF13452 N-terminal half of MaoC dehydratase CP478_RS03450 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CP478_RS03455 PF02357 Transcription termination factor nusG CP478_RS03460 PF00298 Ribosomal protein L11, RNA binding domain CP478_RS03460 PF03946 Ribosomal protein L11, N-terminal domain CP478_RS03465 PF00687 Ribosomal protein L1p/L10e family CP478_RS03490 PF00561 alpha/beta hydrolase fold CP478_RS03495 PF03109 ABC1 family CP478_RS03510 PF00480 ROK family CP478_RS03515 PF00466 Ribosomal protein L10 CP478_RS03520 PF16320 Ribosomal protein L7/L12 dimerisation domain CP478_RS03520 PF00542 Ribosomal protein L7/L12 C-terminal domain CP478_RS03525 PF13305 Tetracyclin repressor-like, C-terminal domain CP478_RS03525 PF00440 Bacterial regulatory proteins, tetR family CP478_RS03530 PF03055 Retinal pigment epithelial membrane protein CP478_RS03535 PF00005 ABC transporter CP478_RS03545 PF09957 Bacterial antitoxin of type II TA system, VapB CP478_RS03555 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system CP478_RS03560 PF01402 Ribbon-helix-helix protein, copG family CP478_RS03565 PF01850 PIN domain CP478_RS03575 PF00884 Sulfatase CP478_RS03585 PF01850 PIN domain CP478_RS03600 PF10385 RNA polymerase beta subunit external 1 domain CP478_RS03600 PF04565 RNA polymerase Rpb2, domain 3 CP478_RS03600 PF04563 RNA polymerase beta subunit CP478_RS03600 PF04561 RNA polymerase Rpb2, domain 2 CP478_RS03600 PF00562 RNA polymerase Rpb2, domain 6 CP478_RS03600 PF04560 RNA polymerase Rpb2, domain 7 CP478_RS03605 PF05000 RNA polymerase Rpb1, domain 4 CP478_RS03605 PF04998 RNA polymerase Rpb1, domain 5 CP478_RS03605 PF00623 RNA polymerase Rpb1, domain 2 CP478_RS03605 PF04997 RNA polymerase Rpb1, domain 1 CP478_RS03605 PF04983 RNA polymerase Rpb1, domain 3 CP478_RS03615 PF04734 Neutral/alkaline non-lysosomal ceramidase, N-terminal CP478_RS03615 PF17048 Neutral/alkaline non-lysosomal ceramidase, C-terminal CP478_RS03620 PF01261 Xylose isomerase-like TIM barrel CP478_RS03625 PF01261 Xylose isomerase-like TIM barrel CP478_RS03630 PF10503 Esterase PHB depolymerase CP478_RS03635 PF02770 Acyl-CoA dehydrogenase, middle domain CP478_RS03635 PF18158 Adaptive response protein AidB N-terminal domain CP478_RS03635 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CP478_RS03640 PF00378 Enoyl-CoA hydratase/isomerase CP478_RS03650 PF00378 Enoyl-CoA hydratase/isomerase CP478_RS03655 PF03176 MMPL family CP478_RS03660 PF05423 Mycobacterium membrane protein CP478_RS03680 PF00440 Bacterial regulatory proteins, tetR family CP478_RS03680 PF13305 Tetracyclin repressor-like, C-terminal domain CP478_RS03685 PF00164 Ribosomal protein S12/S23 CP478_RS03690 PF00177 Ribosomal protein S7p/S5e CP478_RS03695 PF00009 Elongation factor Tu GTP binding domain CP478_RS03695 PF03144 Elongation factor Tu domain 2 CP478_RS03695 PF00679 Elongation factor G C-terminus CP478_RS03695 PF14492 Elongation Factor G, domain II CP478_RS03695 PF03764 Elongation factor G, domain IV CP478_RS03700 PF00009 Elongation factor Tu GTP binding domain CP478_RS03700 PF03144 Elongation factor Tu domain 2 CP478_RS03700 PF03143 Elongation factor Tu C-terminal domain CP478_RS03715 PF14759 Reductase C-terminal CP478_RS03715 PF07992 Pyridine nucleotide-disulphide oxidoreductase CP478_RS03735 PF17754 MftR C-terminal domain CP478_RS03735 PF00440 Bacterial regulatory proteins, tetR family CP478_RS03750 PF04055 Radical SAM superfamily CP478_RS03750 PF13186 Iron-sulfur cluster-binding domain CP478_RS03755 PF01070 FMN-dependent dehydrogenase CP478_RS03760 PF02633 Creatinine amidohydrolase CP478_RS03765 PF00535 Glycosyl transferase family 2 CP478_RS03770 PF00732 GMC oxidoreductase CP478_RS03770 PF05199 GMC oxidoreductase CP478_RS03780 PF01610 Transposase CP478_RS03780 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 CP478_RS03780 PF13542 Helix-turn-helix domain of transposase family ISL3 CP478_RS03800 PF00338 Ribosomal protein S10p/S20e CP478_RS03805 PF00297 Ribosomal protein L3 CP478_RS03810 PF00573 Ribosomal protein L4/L1 family CP478_RS03815 PF00276 Ribosomal protein L23 CP478_RS03820 PF03947 Ribosomal Proteins L2, C-terminal domain CP478_RS03820 PF00181 Ribosomal Proteins L2, RNA binding domain CP478_RS03825 PF00203 Ribosomal protein S19 CP478_RS03830 PF00237 Ribosomal protein L22p/L17e CP478_RS03835 PF07650 KH domain CP478_RS03835 PF00189 Ribosomal protein S3, C-terminal domain CP478_RS03840 PF00252 Ribosomal protein L16p/L10e CP478_RS03845 PF00831 Ribosomal L29 protein CP478_RS03850 PF00366 Ribosomal protein S17 CP478_RS03855 PF00884 Sulfatase CP478_RS03860 PF03781 Sulfatase-modifying factor enzyme 1 CP478_RS03870 PF00238 Ribosomal protein L14p/L23e CP478_RS03875 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CP478_RS03875 PF00467 KOW motif CP478_RS03880 PF00673 ribosomal L5P family C-terminus CP478_RS03880 PF00281 Ribosomal protein L5 CP478_RS03885 PF00253 Ribosomal protein S14p/S29e CP478_RS03890 PF00410 Ribosomal protein S8 CP478_RS03895 PF00347 Ribosomal protein L6 CP478_RS03900 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CP478_RS03905 PF00333 Ribosomal protein S5, N-terminal domain CP478_RS03905 PF03719 Ribosomal protein S5, C-terminal domain CP478_RS03910 PF00327 Ribosomal protein L30p/L7e CP478_RS03915 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CP478_RS03920 PF01343 Peptidase family S49 CP478_RS03925 PF04072 Leucine carboxyl methyltransferase CP478_RS03930 PF04072 Leucine carboxyl methyltransferase CP478_RS03935 PF00596 Class II Aldolase and Adducin N-terminal domain CP478_RS03940 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CP478_RS03940 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CP478_RS03945 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CP478_RS03945 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CP478_RS03955 PF04072 Leucine carboxyl methyltransferase CP478_RS03960 PF00344 SecY translocase CP478_RS03970 PF00557 Metallopeptidase family M24 CP478_RS03975 PF04545 Sigma-70, region 4 CP478_RS03975 PF04542 Sigma-70 region 2 CP478_RS03980 PF13490 Putative zinc-finger CP478_RS04000 PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain CP478_RS04010 PF10774 Domain of unknown function (DUF4226) CP478_RS04025 PF00934 PE family CP478_RS04040 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CP478_RS04040 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CP478_RS04050 PF00934 PE family CP478_RS04050 PF00934 PE family CP478_RS04060 PF00934 PE family CP478_RS04065 PF01402 Ribbon-helix-helix protein, copG family CP478_RS04070 PF01850 PIN domain CP478_RS04085 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CP478_RS04085 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CP478_RS04090 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CP478_RS04090 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CP478_RS04090 PF02770 Acyl-CoA dehydrogenase, middle domain CP478_RS04095 PF00171 Aldehyde dehydrogenase family CP478_RS04100 PF00300 Histidine phosphatase superfamily (branch 1) CP478_RS04100 PF00934 PE family CP478_RS04105 PF00823 PPE family CP478_RS04105 PF01469 Pentapeptide repeats (8 copies) CP478_RS04125 PF00486 Transcriptional regulatory protein, C terminal CP478_RS04125 PF00072 Response regulator receiver domain CP478_RS04130 PF00512 His Kinase A (phospho-acceptor) domain CP478_RS04130 PF00672 HAMP domain CP478_RS04130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CP478_RS04135 PF01230 HIT domain CP478_RS04145 PF08240 Alcohol dehydrogenase GroES-like domain CP478_RS04145 PF00107 Zinc-binding dehydrogenase CP478_RS04160 PF00067 Cytochrome P450 CP478_RS04175 PF00440 Bacterial regulatory proteins, tetR family CP478_RS04180 PF00171 Aldehyde dehydrogenase family CP478_RS04190 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CP478_RS04190 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CP478_RS04200 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CP478_RS04200 PF02843 Phosphoribosylglycinamide synthetase, C domain CP478_RS04200 PF02844 Phosphoribosylglycinamide synthetase, N domain CP478_RS04225 PF10397 Adenylosuccinate lyase C-terminus CP478_RS04225 PF00206 Lyase CP478_RS04230 PF00067 Cytochrome P450 CP478_RS04240 PF01259 SAICAR synthetase CP478_RS04245 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CP478_RS04245 PF00326 Prolyl oligopeptidase family CP478_RS04255 PF07690 Major Facilitator Superfamily CP478_RS04265 PF00890 FAD binding domain CP478_RS04280 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase CP478_RS04300 PF00296 Luciferase-like monooxygenase CP478_RS04305 PF07702 UTRA domain CP478_RS04305 PF00392 Bacterial regulatory proteins, gntR family CP478_RS04310 PF03992 Antibiotic biosynthesis monooxygenase CP478_RS04315 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CP478_RS04315 PF07992 Pyridine nucleotide-disulphide oxidoreductase CP478_RS04335 PF04454 Encapsulating protein for peroxidase CP478_RS04340 PF04261 Dyp-type peroxidase family CP478_RS04345 PF02127 Aminopeptidase I zinc metalloprotease (M18) CP478_RS04355 PF13302 Acetyltransferase (GNAT) domain CP478_RS04360 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CP478_RS04360 PF02769 AIR synthase related protein, C-terminal domain CP478_RS04360 PF00586 AIR synthase related protein, N-terminal domain CP478_RS04370 PF00149 Calcineurin-like phosphoesterase CP478_RS04375 PF17103 Stealth protein CR4, conserved region 4 CP478_RS04375 PF17102 Stealth protein CR3, conserved region 3 CP478_RS04375 PF17101 Stealth protein CR1, conserved region 1 CP478_RS04375 PF11380 Stealth protein CR2, conserved region 2 CP478_RS04385 PF00156 Phosphoribosyl transferase domain CP478_RS04390 PF02769 AIR synthase related protein, C-terminal domain CP478_RS04390 PF00586 AIR synthase related protein, N-terminal domain CP478_RS04410 PF08768 Domain of unknown function (DUF1794) CP478_RS04420 PF07210 Protein of unknown function (DUF1416) CP478_RS04425 PF00581 Rhodanese-like domain CP478_RS04430 PF00085 Thioredoxin CP478_RS04440 PF00486 Transcriptional regulatory protein, C terminal CP478_RS04445 PF00583 Acetyltransferase (GNAT) family CP478_RS04450 PF00005 ABC transporter CP478_RS04455 PF01895 PhoU domain CP478_RS04465 PF01207 Dihydrouridine synthase (Dus) CP478_RS04470 PF03405 Fatty acid desaturase CP478_RS04485 PF01022 Bacterial regulatory protein, arsR family CP478_RS04490 PF14437 MafB19-like deaminase CP478_RS04495 PF12323 Helix-turn-helix domain CP478_RS04495 PF01385 Probable transposase CP478_RS04495 PF07282 Putative transposase DNA-binding domain CP478_RS04500 PF04072 Leucine carboxyl methyltransferase CP478_RS04530 PF00934 PE family CP478_RS04535 PF00934 PE family CP478_RS04545 PF00934 PE family CP478_RS04585 PF00561 alpha/beta hydrolase fold CP478_RS04605 PF00676 Dehydrogenase E1 component CP478_RS04610 PF00196 Bacterial regulatory proteins, luxR family CP478_RS04610 PF00072 Response regulator receiver domain CP478_RS04620 PF07732 Multicopper oxidase CP478_RS04620 PF07731 Multicopper oxidase CP478_RS04620 PF00394 Multicopper oxidase CP478_RS04630 PF00291 Pyridoxal-phosphate dependent enzyme CP478_RS04635 PF07690 Major Facilitator Superfamily CP478_RS04645 PF00106 short chain dehydrogenase CP478_RS04660 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CP478_RS04660 PF00205 Thiamine pyrophosphate enzyme, central domain CP478_RS04660 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CP478_RS04670 PF02515 CoA-transferase family III CP478_RS04685 PF00155 Aminotransferase class I and II CP478_RS04690 PF02803 Thiolase, C-terminal domain CP478_RS04690 PF00108 Thiolase, N-terminal domain CP478_RS04695 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CP478_RS04695 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CP478_RS04695 PF00378 Enoyl-CoA hydratase/isomerase CP478_RS04715 PF01967 MoaC family CP478_RS04720 PF00994 Probable molybdopterin binding domain CP478_RS04725 PF02391 MoaE protein CP478_RS04730 PF06737 Transglycosylase-like domain CP478_RS04740 PF06463 Molybdenum Cofactor Synthesis C CP478_RS04740 PF04055 Radical SAM superfamily CP478_RS04745 PF03733 Inner membrane component domain CP478_RS04750 PF00313 'Cold-shock' DNA-binding domain CP478_RS04755 PF00934 PE family CP478_RS04765 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CP478_RS04765 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CP478_RS04765 PF02770 Acyl-CoA dehydrogenase, middle domain CP478_RS04770 PF10442 FIST C domain CP478_RS04770 PF08495 FIST N domain CP478_RS04775 PF10969 Protein of unknown function (DUF2771) CP478_RS04780 PF07690 Major Facilitator Superfamily CP478_RS04785 PF11228 Protein of unknown function (DUF3027) CP478_RS04790 PF00823 PPE family CP478_RS04790 PF01469 Pentapeptide repeats (8 copies) CP478_RS04795 PF10745 Protein of unknown function (DUF2530) CP478_RS04800 PF01047 MarR family CP478_RS04805 PF00588 SpoU rRNA Methylase family CP478_RS04810 PF10801 Protein of unknown function (DUF2537) CP478_RS04815 PF11268 Protein of unknown function (DUF3071) CP478_RS04820 PF00266 Aminotransferase class-V CP478_RS04825 PF11583 P-aminobenzoate N-oxygenase AurF CP478_RS04830 PF00037 4Fe-4S binding domain CP478_RS04830 PF07992 Pyridine nucleotide-disulphide oxidoreductase CP478_RS04835 PF18029 Glyoxalase-like domain CP478_RS04845 PF03372 Endonuclease/Exonuclease/phosphatase family CP478_RS04850 PF00285 Citrate synthase, C-terminal domain CP478_RS04855 PF00196 Bacterial regulatory proteins, luxR family CP478_RS04860 PF00211 Adenylate and Guanylate cyclase catalytic domain CP478_RS04870 PF00743 Flavin-binding monooxygenase-like CP478_RS04875 PF04072 Leucine carboxyl methyltransferase CP478_RS04885 PF06974 Protein of unknown function (DUF1298) CP478_RS04885 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain CP478_RS04890 PF00285 Citrate synthase, C-terminal domain CP478_RS04900 PF10944 Protein of unknown function (DUF2630) CP478_RS04905 PF00691 OmpA family CP478_RS04905 PF04972 BON domain CP478_RS04920 PF00672 HAMP domain CP478_RS04920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CP478_RS04920 PF00512 His Kinase A (phospho-acceptor) domain CP478_RS04925 PF00486 Transcriptional regulatory protein, C terminal CP478_RS04925 PF00072 Response regulator receiver domain CP478_RS04930 PF01039 Carboxyl transferase domain CP478_RS04935 PF00378 Enoyl-CoA hydratase/isomerase CP478_RS04940 PF12706 Beta-lactamase superfamily domain CP478_RS04955 PF14013 MT0933-like antitoxin protein CP478_RS04960 PF10604 Polyketide cyclase / dehydrase and lipid transport CP478_RS04980 PF03055 Retinal pigment epithelial membrane protein CP478_RS04985 PF00108 Thiolase, N-terminal domain CP478_RS04985 PF02803 Thiolase, C-terminal domain CP478_RS04990 PF12484 Polymorphic PE/PPE proteins C terminal CP478_RS04990 PF00823 PPE family CP478_RS05000 PF02028 BCCT, betaine/carnitine/choline family transporter CP478_RS05025 PF00872 Transposase, Mutator family CP478_RS05030 PF00239 Resolvase, N terminal domain CP478_RS05035 PF12323 Helix-turn-helix domain CP478_RS05035 PF07282 Putative transposase DNA-binding domain CP478_RS05035 PF01385 Probable transposase CP478_RS05045 PF01566 Natural resistance-associated macrophage protein CP478_RS05045 PF03358 NADPH-dependent FMN reductase CP478_RS05050 PF01566 Natural resistance-associated macrophage protein CP478_RS05050 PF03358 NADPH-dependent FMN reductase CP478_RS05065 PF12849 PBP superfamily domain CP478_RS05070 PF00528 Binding-protein-dependent transport system inner membrane component CP478_RS05075 PF00528 Binding-protein-dependent transport system inner membrane component CP478_RS05080 PF00069 Protein kinase domain CP478_RS05080 PF01436 NHL repeat CP478_RS05080 PF08450 SMP-30/Gluconolactonase/LRE-like region CP478_RS05085 PF12849 PBP superfamily domain CP478_RS05090 PF00005 ABC transporter CP478_RS05095 PF12849 PBP superfamily domain CP478_RS05100 PF00528 Binding-protein-dependent transport system inner membrane component CP478_RS05105 PF00528 Binding-protein-dependent transport system inner membrane component CP478_RS05110 PF02735 Ku70/Ku80 beta-barrel domain CP478_RS05115 PF13298 DNA polymerase Ligase (LigD) CP478_RS05115 PF01068 ATP dependent DNA ligase domain CP478_RS05115 PF04679 ATP dependent DNA ligase C terminal region CP478_RS05125 PF00296 Luciferase-like monooxygenase CP478_RS05140 PF16170 Domain of unknown function (DUF4873) CP478_RS05145 PF06827 Zinc finger found in FPG and IleRS CP478_RS05145 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CP478_RS05150 PF00106 short chain dehydrogenase CP478_RS05155 PF00342 Phosphoglucose isomerase CP478_RS05160 PF00756 Putative esterase CP478_RS05165 PF00756 Putative esterase CP478_RS05175 PF01817 Chorismate mutase type II CP478_RS05180 PF13361 UvrD-like helicase C-terminal domain CP478_RS05180 PF00580 UvrD/REP helicase N-terminal domain CP478_RS05185 PF01551 Peptidase family M23 CP478_RS05190 PF00549 CoA-ligase CP478_RS05190 PF08442 ATP-grasp domain CP478_RS05195 PF00549 CoA-ligase CP478_RS05195 PF02629 CoA binding domain CP478_RS05200 PF00296 Luciferase-like monooxygenase CP478_RS05210 PF17270 Family of unknown function (DUF5336) CP478_RS05220 PF00551 Formyl transferase CP478_RS05225 PF02142 MGS-like domain CP478_RS05225 PF01808 AICARFT/IMPCHase bienzyme CP478_RS05230 PF13335 Magnesium chelatase, subunit ChlI C-terminal CP478_RS05230 PF01078 Magnesium chelatase, subunit ChlI CP478_RS05245 PF01850 PIN domain CP478_RS05255 PF16708 Lipoprotein confined to pathogenic Mycobacterium CP478_RS05260 PF06259 Alpha/beta hydrolase CP478_RS05275 PF08044 Domain of unknown function (DUF1707) CP478_RS05280 PF02583 Metal-sensitive transcriptional repressor CP478_RS05285 PF07371 Protein of unknown function (DUF1490) CP478_RS05295 PF17197 Domain of unknown function (DUF5134) CP478_RS05300 PF00378 Enoyl-CoA hydratase/isomerase CP478_RS05305 PF02770 Acyl-CoA dehydrogenase, middle domain CP478_RS05305 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CP478_RS05305 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CP478_RS05310 PF00364 Biotin-requiring enzyme CP478_RS05310 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CP478_RS05310 PF00289 Biotin carboxylase, N-terminal domain CP478_RS05310 PF02785 Biotin carboxylase C-terminal domain CP478_RS05315 PF01039 Carboxyl transferase domain CP478_RS05320 PF02770 Acyl-CoA dehydrogenase, middle domain CP478_RS05320 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CP478_RS05320 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CP478_RS05330 PF00934 PE family CP478_RS05340 PF00934 PE family CP478_RS05340 PF01436 NHL repeat CP478_RS05350 PF01783 Ribosomal L32p protein family CP478_RS05355 PF01436 NHL repeat CP478_RS05355 PF00934 PE family CP478_RS05360 PF00072 Response regulator receiver domain CP478_RS05360 PF00486 Transcriptional regulatory protein, C terminal CP478_RS05365 PF00512 His Kinase A (phospho-acceptor) domain CP478_RS05365 PF00672 HAMP domain CP478_RS05365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CP478_RS05370 PF13180 PDZ domain CP478_RS05375 PF00994 Probable molybdopterin binding domain CP478_RS05375 PF01967 MoaC family CP478_RS05380 PF01741 Large-conductance mechanosensitive channel, MscL CP478_RS05385 PF00005 ABC transporter CP478_RS05390 PF02687 FtsX-like permease family CP478_RS05390 PF12704 MacB-like periplasmic core domain CP478_RS05400 PF00348 Polyprenyl synthetase CP478_RS05415 PF01812 5-formyltetrahydrofolate cyclo-ligase family CP478_RS05420 PF00483 Nucleotidyl transferase CP478_RS05425 PF00994 Probable molybdopterin binding domain CP478_RS05425 PF03454 MoeA C-terminal region (domain IV) CP478_RS05425 PF03453 MoeA N-terminal region (domain I and II) CP478_RS05465 PF13302 Acetyltransferase (GNAT) domain CP478_RS05465 PF00027 Cyclic nucleotide-binding domain CP478_RS05485 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase CP478_RS05485 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase CP478_RS05490 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CP478_RS05500 PF00425 chorismate binding enzyme CP478_RS05500 PF04715 Anthranilate synthase component I, N terminal region CP478_RS05510 PF09334 tRNA synthetases class I (M) CP478_RS05515 PF01026 TatD related DNase CP478_RS05520 PF07501 G5 domain CP478_RS05520 PF06737 Transglycosylase-like domain CP478_RS05520 PF03990 G5-linked-Ubiquitin-like domain CP478_RS05525 PF00398 Ribosomal RNA adenine dimethylase CP478_RS05530 PF00288 GHMP kinases N terminal domain CP478_RS05530 PF08544 GHMP kinases C terminal CP478_RS05545 PF14535 AMP-binding enzyme C-terminal domain CP478_RS05545 PF00501 AMP-binding enzyme CP478_RS05550 PF01195 Peptidyl-tRNA hydrolase CP478_RS05555 PF01386 Ribosomal L25p family CP478_RS05555 PF14693 Ribosomal protein TL5, C-terminal domain CP478_RS05560 PF10738 Probable lipoprotein LpqN CP478_RS05565 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CP478_RS05565 PF14572 Phosphoribosyl synthetase-associated domain CP478_RS05570 PF12804 MobA-like NTP transferase domain CP478_RS05570 PF00132 Bacterial transferase hexapeptide (six repeats) CP478_RS05580 PF00440 Bacterial regulatory proteins, tetR family CP478_RS05580 PF18665 Tetracyclin repressor-like, C-terminal domain CP478_RS05585 PF00270 DEAD/DEAH box helicase CP478_RS05585 PF17757 UvrB interaction domain CP478_RS05585 PF00271 Helicase conserved C-terminal domain CP478_RS05585 PF02559 CarD-like/TRCF domain CP478_RS05585 PF03461 TRCF domain CP478_RS05590 PF03819 MazG nucleotide pyrophosphohydrolase domain CP478_RS05600 PF03952 Enolase, N-terminal domain CP478_RS05600 PF00113 Enolase, C-terminal TIM barrel domain CP478_RS05615 PF02541 Ppx/GppA phosphatase family CP478_RS05625 PF00072 Response regulator receiver domain CP478_RS05625 PF00486 Transcriptional regulatory protein, C terminal CP478_RS05630 PF13493 Domain of unknown function (DUF4118) CP478_RS05630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CP478_RS05630 PF00512 His Kinase A (phospho-acceptor) domain CP478_RS05630 PF00582 Universal stress protein family CP478_RS05630 PF02702 Osmosensitive K+ channel His kinase sensor domain CP478_RS05645 PF03814 Potassium-transporting ATPase A subunit CP478_RS05655 PF02669 K+-transporting ATPase, c chain CP478_RS05660 PF00512 His Kinase A (phospho-acceptor) domain CP478_RS05660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CP478_RS05660 PF00672 HAMP domain CP478_RS05665 PF00486 Transcriptional regulatory protein, C terminal CP478_RS05665 PF00072 Response regulator receiver domain CP478_RS05675 PF06013 Proteins of 100 residues with WXG CP478_RS05680 PF06013 Proteins of 100 residues with WXG CP478_RS05685 PF00823 PPE family CP478_RS05685 PF12484 Polymorphic PE/PPE proteins C terminal CP478_RS05690 PF00934 PE family CP478_RS05715 PF18509 Magnetochrome domain CP478_RS05715 PF17820 PDZ domain CP478_RS05735 PF00872 Transposase, Mutator family CP478_RS05810 PF00501 AMP-binding enzyme CP478_RS05810 PF13193 AMP-binding enzyme C-terminal domain CP478_RS05835 PF01734 Patatin-like phospholipase CP478_RS05840 PF17301 Putative lipoprotein LpqV CP478_RS05855 PF00934 PE family CP478_RS05860 PF00934 PE family CP478_RS05870 PF00378 Enoyl-CoA hydratase/isomerase CP478_RS05890 PF00108 Thiolase, N-terminal domain CP478_RS05890 PF02803 Thiolase, C-terminal domain CP478_RS05895 PF13472 GDSL-like Lipase/Acylhydrolase family CP478_RS05900 PF07859 alpha/beta hydrolase fold CP478_RS05905 PF00571 CBS domain CP478_RS05905 PF00291 Pyridoxal-phosphate dependent enzyme CP478_RS05910 PF06271 RDD family CP478_RS05915 PF01053 Cys/Met metabolism PLP-dependent enzyme CP478_RS05920 PF03449 Transcription elongation factor, N-terminal CP478_RS05920 PF01272 Transcription elongation factor, GreA/GreB, C-term CP478_RS05930 PF02585 GlcNAc-PI de-N-acetylase CP478_RS05940 PF03190 Protein of unknown function, DUF255 CP478_RS05945 PF03006 Haemolysin-III related CP478_RS05950 PF01255 Putative undecaprenyl diphosphate synthase CP478_RS05960 PF00934 PE family CP478_RS05965 PF01255 Putative undecaprenyl diphosphate synthase CP478_RS05970 PF00934 PE family CP478_RS05995 PF00934 PE family CP478_RS06000 PF00485 Phosphoribulokinase / Uridine kinase family CP478_RS06005 PF00464 Serine hydroxymethyltransferase CP478_RS06010 PF03405 Fatty acid desaturase CP478_RS06015 PF02562 PhoH-like protein CP478_RS06015 PF13638 PIN domain CP478_RS06020 PF01522 Polysaccharide deacetylase CP478_RS06030 PF00206 Lyase CP478_RS06030 PF10415 Fumarase C C-terminus CP478_RS06035 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CP478_RS06045 PF01594 AI-2E family transporter CP478_RS06050 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system CP478_RS06070 PF02609 Exonuclease VII small subunit CP478_RS06075 PF02601 Exonuclease VII, large subunit CP478_RS06075 PF13742 OB-fold nucleic acid binding domain CP478_RS06085 PF02401 LytB protein CP478_RS06095 PF01926 50S ribosome-binding GTPase CP478_RS06095 PF06071 Protein of unknown function (DUF933) CP478_RS06100 PF09957 Bacterial antitoxin of type II TA system, VapB CP478_RS06105 PF01850 PIN domain CP478_RS06140 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CP478_RS06140 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CP478_RS06145 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CP478_RS06145 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CP478_RS06155 PF00561 alpha/beta hydrolase fold CP478_RS06170 PF00391 PEP-utilising enzyme, mobile domain CP478_RS06170 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CP478_RS06170 PF02896 PEP-utilising enzyme, TIM barrel domain CP478_RS06175 PF02720 Domain of unknown function (DUF222) CP478_RS06180 PF09856 Predicted transcriptional regulator (DUF2083) CP478_RS06180 PF01381 Helix-turn-helix CP478_RS06180 PF06114 IrrE N-terminal-like domain CP478_RS06185 PF03972 MmgE/PrpD family CP478_RS06190 PF00285 Citrate synthase, C-terminal domain CP478_RS06200 PF01717 Cobalamin-independent synthase, Catalytic domain CP478_RS06200 PF08267 Cobalamin-independent synthase, N-terminal domain CP478_RS06210 PF00823 PPE family CP478_RS06210 PF01469 Pentapeptide repeats (8 copies) CP478_RS06215 PF00108 Thiolase, N-terminal domain CP478_RS06215 PF02803 Thiolase, C-terminal domain CP478_RS06230 PF01494 FAD binding domain CP478_RS06235 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family CP478_RS06250 PF00378 Enoyl-CoA hydratase/isomerase CP478_RS06255 PF00378 Enoyl-CoA hydratase/isomerase CP478_RS06260 PF02515 CoA-transferase family III CP478_RS06265 PF00106 short chain dehydrogenase CP478_RS06275 PF03176 MMPL family CP478_RS06280 PF03176 MMPL family CP478_RS06305 PF02720 Domain of unknown function (DUF222) CP478_RS06305 PF01844 HNH endonuclease CP478_RS06315 PF02146 Sir2 family CP478_RS06325 PF04072 Leucine carboxyl methyltransferase CP478_RS06335 PF01243 Pyridoxamine 5'-phosphate oxidase CP478_RS06340 PF17227 Family of unknown function (DUF5302) CP478_RS06365 PF09594 Glycosyltransferase family 87 CP478_RS06370 PF01329 Pterin 4 alpha carbinolamine dehydratase CP478_RS06375 PF00293 NUDIX domain CP478_RS06380 PF01568 Molydopterin dinucleotide binding domain CP478_RS06380 PF00384 Molybdopterin oxidoreductase CP478_RS06385 PF14711 Respiratory nitrate reductase beta C-terminal CP478_RS06385 PF13247 4Fe-4S dicluster domain CP478_RS06390 PF02613 Nitrate reductase delta subunit CP478_RS06390 PF02665 Nitrate reductase gamma subunit CP478_RS06390 PF00384 Molybdopterin oxidoreductase CP478_RS06395 PF02613 Nitrate reductase delta subunit CP478_RS06395 PF00384 Molybdopterin oxidoreductase CP478_RS06395 PF02665 Nitrate reductase gamma subunit CP478_RS06400 PF03144 Elongation factor Tu domain 2 CP478_RS06400 PF14492 Elongation Factor G, domain II CP478_RS06400 PF00009 Elongation factor Tu GTP binding domain CP478_RS06400 PF00679 Elongation factor G C-terminus CP478_RS06405 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CP478_RS06415 PF12484 Polymorphic PE/PPE proteins C terminal CP478_RS06415 PF00823 PPE family CP478_RS06420 PF00934 PE family CP478_RS06425 PF02585 GlcNAc-PI de-N-acetylase CP478_RS06435 PF00934 PE family CP478_RS06440 PF04055 Radical SAM superfamily CP478_RS06450 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CP478_RS06450 PF07992 Pyridine nucleotide-disulphide oxidoreductase CP478_RS06460 PF00037 4Fe-4S binding domain CP478_RS06465 PF00155 Aminotransferase class I and II CP478_RS06475 PF14765 Polyketide synthase dehydratase CP478_RS06475 PF08659 KR domain CP478_RS06475 PF02801 Beta-ketoacyl synthase, C-terminal domain CP478_RS06475 PF00550 Phosphopantetheine attachment site CP478_RS06475 PF00109 Beta-ketoacyl synthase, N-terminal domain CP478_RS06475 PF00698 Acyl transferase domain CP478_RS06475 PF16197 Ketoacyl-synthetase C-terminal extension CP478_RS06475 PF08240 Alcohol dehydrogenase GroES-like domain CP478_RS06475 PF00107 Zinc-binding dehydrogenase CP478_RS06480 PF00668 Condensation domain CP478_RS06485 PF03176 MMPL family CP478_RS06490 PF08237 PE-PPE domain CP478_RS06495 PF00501 AMP-binding enzyme CP478_RS06500 PF17853 GGDEF-like domain CP478_RS06500 PF13556 PucR C-terminal helix-turn-helix domain CP478_RS06500 PF06018 CodY GAF-like domain CP478_RS06505 PF00171 Aldehyde dehydrogenase family CP478_RS06510 PF01619 Proline dehydrogenase CP478_RS06515 PF08281 Sigma-70, region 4 CP478_RS06515 PF04542 Sigma-70 region 2 CP478_RS06520 PF00561 alpha/beta hydrolase fold CP478_RS06535 PF13193 AMP-binding enzyme C-terminal domain CP478_RS06535 PF00501 AMP-binding enzyme CP478_RS06550 PF00934 PE family CP478_RS06555 PF00823 PPE family CP478_RS06555 PF12484 Polymorphic PE/PPE proteins C terminal CP478_RS06560 PF06013 Proteins of 100 residues with WXG CP478_RS06565 PF06013 Proteins of 100 residues with WXG CP478_RS06570 PF00872 Transposase, Mutator family CP478_RS06580 PF00083 Sugar (and other) transporter CP478_RS06580 PF07690 Major Facilitator Superfamily CP478_RS06585 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle CP478_RS06585 PF14602 Hexapeptide repeat of succinyl-transferase CP478_RS06590 PF07687 Peptidase dimerisation domain CP478_RS06590 PF01546 Peptidase family M20/M25/M40 CP478_RS06605 PF03641 Possible lysine decarboxylase CP478_RS06610 PF13193 AMP-binding enzyme C-terminal domain CP478_RS06610 PF00501 AMP-binding enzyme CP478_RS06615 PF00809 Pterin binding enzyme CP478_RS06620 PF00535 Glycosyl transferase family 2 CP478_RS06630 PF13673 Acetyltransferase (GNAT) domain CP478_RS06630 PF03352 Methyladenine glycosylase CP478_RS06630 PF00117 Glutamine amidotransferase class-I CP478_RS06630 PF00958 GMP synthase C terminal domain CP478_RS06630 PF13302 Acetyltransferase (GNAT) domain CP478_RS06640 PF13439 Glycosyltransferase Family 4 CP478_RS06640 PF00534 Glycosyl transferases group 1 CP478_RS06645 PF00483 Nucleotidyl transferase CP478_RS06650 PF00934 PE family CP478_RS06670 PF13732 Domain of unknown function (DUF4162) CP478_RS06670 PF00005 ABC transporter CP478_RS06675 PF17933 Tetracyclin repressor-like, C-terminal domain CP478_RS06675 PF00440 Bacterial regulatory proteins, tetR family CP478_RS06680 PF01596 O-methyltransferase CP478_RS06685 PF04542 Sigma-70 region 2 CP478_RS06685 PF08281 Sigma-70, region 4 CP478_RS06700 PF13180 PDZ domain CP478_RS06705 PF02416 mttA/Hcf106 family CP478_RS06710 PF13419 Haloacid dehalogenase-like hydrolase CP478_RS06735 PF01883 Iron-sulfur cluster assembly protein CP478_RS06735 PF10609 NUBPL iron-transfer P-loop NTPase CP478_RS06750 PF01769 Divalent cation transporter CP478_RS06750 PF03448 MgtE intracellular N domain CP478_RS06750 PF00571 CBS domain CP478_RS06765 PF01547 Bacterial extracellular solute-binding protein CP478_RS06770 PF00528 Binding-protein-dependent transport system inner membrane component CP478_RS06775 PF00528 Binding-protein-dependent transport system inner membrane component CP478_RS06780 PF00005 ABC transporter CP478_RS06780 PF17912 MalK OB fold domain CP478_RS06785 PF01544 CorA-like Mg2+ transporter protein CP478_RS06790 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CP478_RS06790 PF00056 lactate/malate dehydrogenase, NAD binding domain CP478_RS06800 PF01850 PIN domain CP478_RS06805 PF00934 PE family CP478_RS06820 PF00106 short chain dehydrogenase CP478_RS06825 PF05016 ParE toxin of type II toxin-antitoxin system, parDE CP478_RS06830 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system CP478_RS06835 PF02779 Transketolase, pyrimidine binding domain CP478_RS06835 PF16870 2-oxoglutarate dehydrogenase C-terminal CP478_RS06835 PF00676 Dehydrogenase E1 component CP478_RS06835 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CP478_RS06835 PF16078 2-oxoglutarate dehydrogenase N-terminus CP478_RS06845 PF07690 Major Facilitator Superfamily CP478_RS06855 PF14041 LppP/LprE lipoprotein CP478_RS06860 PF03880 DbpA RNA binding domain CP478_RS06860 PF00271 Helicase conserved C-terminal domain CP478_RS06860 PF00270 DEAD/DEAH box helicase CP478_RS06870 PF00440 Bacterial regulatory proteins, tetR family CP478_RS06875 PF00067 Cytochrome P450 CP478_RS06880 PF01565 FAD binding domain CP478_RS06880 PF02913 FAD linked oxidases, C-terminal domain CP478_RS06885 PF07690 Major Facilitator Superfamily CP478_RS06890 PF03167 Uracil DNA glycosylase superfamily CP478_RS06895 PF01494 FAD binding domain CP478_RS06900 PF04075 F420H(2)-dependent quinone reductase CP478_RS06905 PF01230 HIT domain CP478_RS06910 PF01425 Amidase CP478_RS06915 PF00211 Adenylate and Guanylate cyclase catalytic domain CP478_RS06915 PF16701 Adenylate cyclase regulatory domain CP478_RS06925 PF00069 Protein kinase domain CP478_RS06925 PF14032 PknH-like extracellular domain CP478_RS06930 PF00486 Transcriptional regulatory protein, C terminal CP478_RS06930 PF03704 Bacterial transcriptional activator domain CP478_RS06930 PF00498 FHA domain CP478_RS06940 PF13529 Peptidase_C39 like family CP478_RS06945 PF13827 Domain of unknown function (DUF4189) CP478_RS06950 PF07161 LppX_LprAFG lipoprotein CP478_RS06955 PF05305 Protein of unknown function (DUF732) CP478_RS06960 PF00664 ABC transporter transmembrane region CP478_RS06960 PF00005 ABC transporter CP478_RS06965 PF00664 ABC transporter transmembrane region CP478_RS06965 PF00005 ABC transporter CP478_RS06970 PF12079 Protein of unknown function (DUF3558) CP478_RS06980 PF00300 Histidine phosphatase superfamily (branch 1) CP478_RS06990 PF13175 AAA ATPase domain CP478_RS06995 PF00732 GMC oxidoreductase CP478_RS06995 PF05199 GMC oxidoreductase CP478_RS07000 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CP478_RS07005 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CP478_RS07005 PF00005 ABC transporter CP478_RS07010 PF12911 N-terminal TM domain of oligopeptide transport permease C CP478_RS07010 PF00528 Binding-protein-dependent transport system inner membrane component CP478_RS07015 PF00528 Binding-protein-dependent transport system inner membrane component CP478_RS07020 PF00484 Carbonic anhydrase CP478_RS07025 PF01507 Phosphoadenosine phosphosulfate reductase family CP478_RS07030 PF00009 Elongation factor Tu GTP binding domain CP478_RS07035 PF02082 Transcriptional regulator CP478_RS07040 PF01476 LysM domain CP478_RS07040 PF00756 Putative esterase CP478_RS07050 PF10011 Predicted membrane protein (DUF2254) CP478_RS07060 PF05305 Protein of unknown function (DUF732) CP478_RS07070 PF05746 DALR anticodon binding domain CP478_RS07070 PF00750 tRNA synthetases class I (R) CP478_RS07070 PF03485 Arginyl tRNA synthetase N terminal domain CP478_RS07075 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CP478_RS07075 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CP478_RS07080 PF03447 Homoserine dehydrogenase, NAD binding domain CP478_RS07080 PF00742 Homoserine dehydrogenase CP478_RS07080 PF01842 ACT domain CP478_RS07085 PF00291 Pyridoxal-phosphate dependent enzyme CP478_RS07095 PF00288 GHMP kinases N terminal domain CP478_RS07105 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CP478_RS07105 PF07497 Rho termination factor, RNA-binding domain CP478_RS07105 PF07498 Rho termination factor, N-terminal domain CP478_RS07115 PF01197 Ribosomal protein L31 CP478_RS07120 PF00472 RF-1 domain CP478_RS07120 PF03462 PCRF domain CP478_RS07125 PF17827 PrmC N-terminal domain CP478_RS07125 PF13649 Methyltransferase domain CP478_RS07130 PF01300 Telomere recombination CP478_RS07135 PF00953 Glycosyl transferase family 4 CP478_RS07140 PF03899 ATP synthase I chain CP478_RS07145 PF00119 ATP synthase A chain CP478_RS07150 PF00137 ATP synthase subunit C CP478_RS07155 PF00430 ATP synthase B/B' CF(0) CP478_RS07160 PF00213 ATP synthase delta (OSCP) subunit CP478_RS07160 PF00430 ATP synthase B/B' CF(0) CP478_RS07165 PF00306 ATP synthase alpha/beta chain, C terminal domain CP478_RS07165 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CP478_RS07165 PF02874 ATP synthase alpha/beta family, beta-barrel domain CP478_RS07170 PF00231 ATP synthase CP478_RS07175 PF02874 ATP synthase alpha/beta family, beta-barrel domain CP478_RS07175 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CP478_RS07180 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CP478_RS07185 PF10739 Protein of unknown function (DUF2550) CP478_RS07190 PF01610 Transposase CP478_RS07190 PF13542 Helix-turn-helix domain of transposase family ISL3 CP478_RS07190 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 CP478_RS07195 PF01923 Cobalamin adenosyltransferase CP478_RS07200 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CP478_RS07220 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CP478_RS07220 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CP478_RS07225 PF06029 AlkA N-terminal domain CP478_RS07225 PF02805 Metal binding domain of Ada CP478_RS07225 PF00730 HhH-GPD superfamily base excision DNA repair protein CP478_RS07225 PF12833 Helix-turn-helix domain CP478_RS07230 PF00211 Adenylate and Guanylate cyclase catalytic domain CP478_RS07230 PF00672 HAMP domain CP478_RS07235 PF00672 HAMP domain CP478_RS07235 PF00211 Adenylate and Guanylate cyclase catalytic domain CP478_RS07240 PF00672 HAMP domain CP478_RS07240 PF00211 Adenylate and Guanylate cyclase catalytic domain CP478_RS07245 PF01939 Endonuclease NucS CP478_RS07260 PF02803 Thiolase, C-terminal domain CP478_RS07260 PF00108 Thiolase, N-terminal domain CP478_RS07265 PF00085 Thioredoxin CP478_RS07270 PF00934 PE family CP478_RS07275 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CP478_RS07275 PF02806 Alpha amylase, C-terminal all-beta domain CP478_RS07275 PF00128 Alpha amylase, catalytic domain CP478_RS07280 PF11896 Domain of unknown function (DUF3416) CP478_RS07280 PF00128 Alpha amylase, catalytic domain CP478_RS07285 PF11897 Protein of unknown function (DUF3417) CP478_RS07285 PF00343 Carbohydrate phosphorylase CP478_RS07290 PF13307 Helicase C-terminal domain CP478_RS07295 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CP478_RS07295 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CP478_RS07300 PF02617 ATP-dependent Clp protease adaptor protein ClpS CP478_RS07305 PF09438 Domain of unknown function (DUF2017) CP478_RS07310 PF03576 Peptidase family S58 CP478_RS07315 PF14464 Prokaryotic homologs of the JAB domain CP478_RS07320 PF02597 ThiS family CP478_RS07325 PF00291 Pyridoxal-phosphate dependent enzyme CP478_RS07330 PF01694 Rhomboid family CP478_RS07335 PF01177 Asp/Glu/Hydantoin racemase CP478_RS07340 PF12706 Beta-lactamase superfamily domain CP478_RS07345 PF01138 3' exoribonuclease family, domain 1 CP478_RS07345 PF03725 3' exoribonuclease family, domain 2 CP478_RS07350 PF01725 Ham1 family CP478_RS07355 PF12823 Domain of unknown function (DUF3817) CP478_RS07365 PF00550 Phosphopantetheine attachment site CP478_RS07370 PF00501 AMP-binding enzyme CP478_RS07375 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CP478_RS07375 PF02770 Acyl-CoA dehydrogenase, middle domain CP478_RS07375 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CP478_RS07390 PF04954 Siderophore-interacting protein CP478_RS07390 PF08021 Siderophore-interacting FAD-binding domain CP478_RS07390 PF00005 ABC transporter CP478_RS07390 PF00664 ABC transporter transmembrane region CP478_RS07395 PF00005 ABC transporter CP478_RS07425 PF00440 Bacterial regulatory proteins, tetR family CP478_RS07425 PF02909 Tetracyclin repressor-like, C-terminal domain CP478_RS07430 PF13185 GAF domain CP478_RS07430 PF00990 Diguanylate cyclase, GGDEF domain CP478_RS07430 PF00563 EAL domain CP478_RS07445 PF00563 EAL domain CP478_RS07465 PF00296 Luciferase-like monooxygenase CP478_RS07470 PF00823 PPE family CP478_RS07470 PF12484 Polymorphic PE/PPE proteins C terminal CP478_RS07485 PF07228 Stage II sporulation protein E (SpoIIE) CP478_RS07485 PF08448 PAS fold CP478_RS07485 PF13581 Histidine kinase-like ATPase domain CP478_RS07485 PF13466 STAS domain CP478_RS07490 PF01740 STAS domain CP478_RS07495 PF04607 Region found in RelA / SpoT proteins CP478_RS07505 PF00144 Beta-lactamase CP478_RS07510 PF07161 LppX_LprAFG lipoprotein CP478_RS07525 PF00195 Chalcone and stilbene synthases, N-terminal domain CP478_RS07525 PF02797 Chalcone and stilbene synthases, C-terminal domain CP478_RS07530 PF00685 Sulfotransferase domain CP478_RS07540 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding CP478_RS07550 PF13649 Methyltransferase domain CP478_RS07560 PF00156 Phosphoribosyl transferase domain CP478_RS07565 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CP478_RS07565 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CP478_RS07570 PF01979 Amidohydrolase family CP478_RS07580 PF00117 Glutamine amidotransferase class-I CP478_RS07580 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CP478_RS07585 PF02142 MGS-like domain CP478_RS07585 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CP478_RS07585 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CP478_RS07590 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CP478_RS07595 PF00934 PE family CP478_RS07600 PF00823 PPE family CP478_RS07615 PF00625 Guanylate kinase CP478_RS07620 PF01192 RNA polymerase Rpb6 CP478_RS07625 PF04127 DNA / pantothenate metabolism flavoprotein CP478_RS07625 PF02441 Flavoprotein CP478_RS07630 PF02773 S-adenosylmethionine synthetase, C-terminal domain CP478_RS07630 PF00438 S-adenosylmethionine synthetase, N-terminal domain CP478_RS07630 PF02772 S-adenosylmethionine synthetase, central domain CP478_RS07635 PF00743 Flavin-binding monooxygenase-like CP478_RS07640 PF00067 Cytochrome P450 CP478_RS07645 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term CP478_RS07645 PF12833 Helix-turn-helix domain CP478_RS07655 PF01850 PIN domain CP478_RS07660 PF01402 Ribbon-helix-helix protein, copG family CP478_RS07665 PF07859 alpha/beta hydrolase fold CP478_RS07670 PF07859 alpha/beta hydrolase fold CP478_RS07675 PF07947 YhhN family CP478_RS07680 PF17764 3′ DNA-binding domain (3′BD) CP478_RS07685 PF13649 Methyltransferase domain CP478_RS07695 PF08241 Methyltransferase domain CP478_RS07700 PF02911 Formyl transferase, C-terminal domain CP478_RS07700 PF00551 Formyl transferase CP478_RS07705 PF01029 NusB family CP478_RS07705 PF01189 16S rRNA methyltransferase RsmB/F CP478_RS07710 PF00834 Ribulose-phosphate 3 epimerase family CP478_RS07715 PF01872 RibD C-terminal domain CP478_RS07715 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CP478_RS07720 PF07690 Major Facilitator Superfamily CP478_RS07725 PF07161 LppX_LprAFG lipoprotein CP478_RS07730 PF00677 Lumazine binding domain CP478_RS07735 PF01168 Alanine racemase, N-terminal domain CP478_RS07740 PF14031 Putative serine dehydratase domain CP478_RS07745 PF00925 GTP cyclohydrolase II CP478_RS07745 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CP478_RS07750 PF00885 6,7-dimethyl-8-ribityllumazine synthase CP478_RS07755 PF10756 Bacterial PH domain CP478_RS07765 PF00652 Ricin-type beta-trefoil lectin domain CP478_RS07770 PF01541 GIY-YIG catalytic domain CP478_RS07770 PF02151 UvrB/uvrC motif CP478_RS07770 PF08459 UvrC Helix-hairpin-helix N-terminal CP478_RS07775 PF03668 P-loop ATPase protein family CP478_RS07780 PF01933 Uncharacterised protein family UPF0052 CP478_RS07785 PF14527 WhiA LAGLIDADG-like domain CP478_RS07785 PF10298 WhiA N-terminal LAGLIDADG-like domain CP478_RS07785 PF02650 WhiA C-terminal HTH domain CP478_RS07795 PF06974 Protein of unknown function (DUF1298) CP478_RS07795 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain CP478_RS07800 PF07859 alpha/beta hydrolase fold CP478_RS07805 PF00501 AMP-binding enzyme CP478_RS07805 PF13193 AMP-binding enzyme C-terminal domain CP478_RS07820 PF08237 PE-PPE domain CP478_RS07820 PF00934 PE family CP478_RS07835 PF03734 L,D-transpeptidase catalytic domain CP478_RS07835 PF17964 Bacterial Ig domain CP478_RS07855 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CP478_RS07855 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CP478_RS07860 PF00162 Phosphoglycerate kinase CP478_RS07865 PF00121 Triosephosphate isomerase CP478_RS07885 PF03840 Preprotein translocase SecG subunit CP478_RS07895 PF00934 PE family CP478_RS07900 PF18364 Molybdopterin oxidoreductase N-terminal domain CP478_RS07900 PF00384 Molybdopterin oxidoreductase CP478_RS07900 PF01568 Molydopterin dinucleotide binding domain CP478_RS07925 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CP478_RS07935 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CP478_RS07935 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CP478_RS07940 PF00923 Transaldolase/Fructose-6-phosphate aldolase CP478_RS07945 PF02779 Transketolase, pyrimidine binding domain CP478_RS07945 PF02780 Transketolase, C-terminal domain CP478_RS07945 PF00456 Transketolase, thiamine diphosphate binding domain CP478_RS07955 PF00934 PE family CP478_RS07960 PF01040 UbiA prenyltransferase family CP478_RS07965 PF00934 PE family CP478_RS07975 PF00107 Zinc-binding dehydrogenase CP478_RS07975 PF08240 Alcohol dehydrogenase GroES-like domain CP478_RS07995 PF00005 ABC transporter CP478_RS08010 PF01458 Uncharacterized protein family (UPF0051) CP478_RS08015 PF01458 Uncharacterized protein family (UPF0051) CP478_RS08020 PF00005 ABC transporter CP478_RS08025 PF00266 Aminotransferase class-V CP478_RS08030 PF01592 NifU-like N terminal domain CP478_RS08035 PF01883 Iron-sulfur cluster assembly protein CP478_RS08040 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CP478_RS08040 PF02770 Acyl-CoA dehydrogenase, middle domain CP478_RS08040 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CP478_RS08045 PF00934 PE family CP478_RS08060 PF00085 Thioredoxin CP478_RS08065 PF00378 Enoyl-CoA hydratase/isomerase CP478_RS08070 PF00005 ABC transporter CP478_RS08070 PF12848 ABC transporter CP478_RS08080 PF00440 Bacterial regulatory proteins, tetR family CP478_RS08085 PF00330 Aconitase family (aconitate hydratase) CP478_RS08085 PF00694 Aconitase C-terminal domain CP478_RS08095 PF00877 NlpC/P60 family CP478_RS08100 PF00877 NlpC/P60 family CP478_RS08105 PF07726 ATPase family associated with various cellular activities (AAA) CP478_RS08105 PF17863 AAA lid domain CP478_RS08110 PF01882 Protein of unknown function DUF58 CP478_RS08115 PF13519 von Willebrand factor type A domain CP478_RS08135 PF00762 Ferrochelatase CP478_RS08150 PF01145 SPFH domain / Band 7 family CP478_RS08160 PF01642 Methylmalonyl-CoA mutase CP478_RS08160 PF02310 B12 binding domain CP478_RS08175 PF09335 SNARE associated Golgi protein CP478_RS08180 PF01642 Methylmalonyl-CoA mutase CP478_RS08185 PF02310 B12 binding domain CP478_RS08185 PF01642 Methylmalonyl-CoA mutase CP478_RS08195 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system CP478_RS08205 PF00144 Beta-lactamase CP478_RS08210 PF08241 Methyltransferase domain CP478_RS08215 PF07311 Dodecin CP478_RS08225 PF00535 Glycosyl transferase family 2 CP478_RS08230 PF05721 Phytanoyl-CoA dioxygenase (PhyH) CP478_RS08250 PF13649 Methyltransferase domain CP478_RS08255 PF08889 WbqC-like protein family CP478_RS08270 PF16363 GDP-mannose 4,6 dehydratase CP478_RS08290 PF16363 GDP-mannose 4,6 dehydratase CP478_RS08295 PF01370 NAD dependent epimerase/dehydratase family CP478_RS08305 PF00535 Glycosyl transferase family 2 CP478_RS08315 PF00535 Glycosyl transferase family 2 CP478_RS08320 PF11139 Sap, sulfolipid-1-addressing protein CP478_RS08325 PF00535 Glycosyl transferase family 2 CP478_RS08330 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CP478_RS08335 PF00535 Glycosyl transferase family 2 CP478_RS08345 PF00501 AMP-binding enzyme CP478_RS08350 PF03176 MMPL family CP478_RS08355 PF08241 Methyltransferase domain CP478_RS08360 PF03033 Glycosyltransferase family 28 N-terminal domain CP478_RS08370 PF03033 Glycosyltransferase family 28 N-terminal domain CP478_RS08375 PF14765 Polyketide synthase dehydratase CP478_RS08375 PF00109 Beta-ketoacyl synthase, N-terminal domain CP478_RS08375 PF08659 KR domain CP478_RS08375 PF00698 Acyl transferase domain CP478_RS08375 PF02801 Beta-ketoacyl synthase, C-terminal domain CP478_RS08375 PF00107 Zinc-binding dehydrogenase CP478_RS08375 PF00550 Phosphopantetheine attachment site CP478_RS08375 PF16197 Ketoacyl-synthetase C-terminal extension CP478_RS08375 PF08240 Alcohol dehydrogenase GroES-like domain CP478_RS08385 PF00501 AMP-binding enzyme CP478_RS08390 PF08240 Alcohol dehydrogenase GroES-like domain CP478_RS08390 PF00107 Zinc-binding dehydrogenase CP478_RS08405 PF03060 Nitronate monooxygenase CP478_RS08410 PF16295 Tetracyclin repressor-like, C-terminal domain CP478_RS08410 PF00440 Bacterial regulatory proteins, tetR family CP478_RS08420 PF08264 Anticodon-binding domain of tRNA CP478_RS08420 PF00133 tRNA synthetases class I (I, L, M and V) CP478_RS08425 PF00817 impB/mucB/samB family CP478_RS08425 PF11799 impB/mucB/samB family C-terminal domain CP478_RS08425 PF11798 IMS family HHH motif CP478_RS08430 PF17763 Glutaminase/Asparaginase C-terminal domain CP478_RS08430 PF00710 Asparaginase, N-terminal CP478_RS08435 PF01252 Signal peptidase (SPase) II CP478_RS08440 PF00849 RNA pseudouridylate synthase CP478_RS08445 PF07007 Lysozyme inhibitor LprI CP478_RS08445 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme CP478_RS08450 PF01152 Bacterial-like globin CP478_RS08455 PF00106 short chain dehydrogenase CP478_RS08460 PF00106 short chain dehydrogenase CP478_RS08470 PF10604 Polyketide cyclase / dehydrase and lipid transport CP478_RS08475 PF14579 Helix-hairpin-helix motif CP478_RS08475 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CP478_RS08475 PF02811 PHP domain CP478_RS08475 PF07733 Bacterial DNA polymerase III alpha NTPase domain CP478_RS08480 PF01469 Pentapeptide repeats (8 copies) CP478_RS08480 PF00823 PPE family CP478_RS08485 PF00501 AMP-binding enzyme CP478_RS08490 PF00501 AMP-binding enzyme CP478_RS08495 PF01553 Acyltransferase CP478_RS08505 PF02910 Fumarate reductase flavoprotein C-term CP478_RS08505 PF00890 FAD binding domain CP478_RS08510 PF13183 4Fe-4S dicluster domain CP478_RS08510 PF13085 2Fe-2S iron-sulfur cluster binding domain CP478_RS08515 PF02300 Fumarate reductase subunit C CP478_RS08520 PF02313 Fumarate reductase subunit D CP478_RS08525 PF00440 Bacterial regulatory proteins, tetR family CP478_RS08525 PF16859 Tetracyclin repressor-like, C-terminal domain CP478_RS08530 PF03176 MMPL family CP478_RS08535 PF04075 F420H(2)-dependent quinone reductase CP478_RS08540 PF00291 Pyridoxal-phosphate dependent enzyme CP478_RS08540 PF00585 C-terminal regulatory domain of Threonine dehydratase CP478_RS08545 PF09957 Bacterial antitoxin of type II TA system, VapB CP478_RS08550 PF01850 PIN domain CP478_RS08555 PF00128 Alpha amylase, catalytic domain CP478_RS08555 PF11941 Domain of unknown function (DUF3459) CP478_RS08560 PF00128 Alpha amylase, catalytic domain CP478_RS08565 PF00128 Alpha amylase, catalytic domain CP478_RS08565 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CP478_RS08570 PF01757 Acyltransferase family CP478_RS08575 PF00877 NlpC/P60 family CP478_RS08585 PF00202 Aminotransferase class-III CP478_RS08590 PF00155 Aminotransferase class I and II CP478_RS08610 PF02720 Domain of unknown function (DUF222) CP478_RS08665 PF10888 Protein of unknown function (DUF2742) CP478_RS08695 PF02720 Domain of unknown function (DUF222) CP478_RS08700 PF06968 Biotin and Thiamin Synthesis associated domain CP478_RS08700 PF04055 Radical SAM superfamily CP478_RS08710 PF10821 Protein of unknown function (DUF2567) CP478_RS08715 PF03583 Secretory lipase CP478_RS08725 PF02445 Quinolinate synthetase A protein CP478_RS08730 PF00890 FAD binding domain CP478_RS08730 PF02910 Fumarate reductase flavoprotein C-term CP478_RS08735 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CP478_RS08735 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CP478_RS08750 PF00815 Histidinol dehydrogenase CP478_RS08755 PF00155 Aminotransferase class I and II CP478_RS08760 PF00475 Imidazoleglycerol-phosphate dehydratase CP478_RS08765 PF00117 Glutamine amidotransferase class-I CP478_RS08770 PF00977 Histidine biosynthesis protein CP478_RS08775 PF00459 Inositol monophosphatase family CP478_RS08780 PF00977 Histidine biosynthesis protein CP478_RS08785 PF01502 Phosphoribosyl-AMP cyclohydrolase CP478_RS08790 PF01699 Sodium/calcium exchanger protein CP478_RS08795 PF00578 AhpC/TSA family CP478_RS08800 PF00425 chorismate binding enzyme CP478_RS08800 PF04715 Anthranilate synthase component I, N terminal region CP478_RS08810 PF00218 Indole-3-glycerol phosphate synthase CP478_RS08815 PF00291 Pyridoxal-phosphate dependent enzyme CP478_RS08820 PF00290 Tryptophan synthase alpha chain CP478_RS08825 PF01790 Prolipoprotein diacylglyceryl transferase CP478_RS08845 PF02887 Pyruvate kinase, alpha/beta domain CP478_RS08845 PF00224 Pyruvate kinase, barrel domain CP478_RS08855 PF00583 Acetyltransferase (GNAT) family CP478_RS08860 PF00005 ABC transporter CP478_RS08865 PF00664 ABC transporter transmembrane region CP478_RS08865 PF00005 ABC transporter CP478_RS08870 PF02322 Cytochrome bd terminal oxidase subunit II CP478_RS08875 PF01654 Cytochrome bd terminal oxidase subunit I CP478_RS08885 PF00211 Adenylate and Guanylate cyclase catalytic domain CP478_RS08895 PF00072 Response regulator receiver domain CP478_RS08895 PF03861 ANTAR domain CP478_RS08910 PF00476 DNA polymerase family A CP478_RS08910 PF01367 5'-3' exonuclease, C-terminal SAM fold CP478_RS08910 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CP478_RS08915 PF00575 S1 RNA binding domain CP478_RS08920 PF04229 GrpB protein CP478_RS08920 PF01121 Dephospho-CoA kinase CP478_RS08935 PF00271 Helicase conserved C-terminal domain CP478_RS08935 PF02151 UvrB/uvrC motif CP478_RS08935 PF12344 Ultra-violet resistance protein B CP478_RS08935 PF17757 UvrB interaction domain CP478_RS08935 PF04851 Type III restriction enzyme, res subunit CP478_RS08940 PF07690 Major Facilitator Superfamily CP478_RS08955 PF00582 Universal stress protein family CP478_RS08960 PF00753 Metallo-beta-lactamase superfamily CP478_RS08965 PF17760 UvrA interaction domain CP478_RS08965 PF00005 ABC transporter CP478_RS08965 PF17755 UvrA DNA-binding domain CP478_RS08980 PF01336 OB-fold nucleic acid binding domain CP478_RS08980 PF00152 tRNA synthetases class II (D, K and N) CP478_RS08980 PF09924 Uncharacterised conserved protein (DUF2156) CP478_RS08980 PF16995 Transmembrane region of lysyl-tRNA synthetase CP478_RS08985 PF05198 Translation initiation factor IF-3, N-terminal domain CP478_RS08985 PF00707 Translation initiation factor IF-3, C-terminal domain CP478_RS08990 PF01632 Ribosomal protein L35 CP478_RS08995 PF00453 Ribosomal protein L20 CP478_RS09000 PF00588 SpoU rRNA Methylase family CP478_RS09010 PF00934 PE family CP478_RS09025 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CP478_RS09025 PF01409 tRNA synthetases class II core domain (F) CP478_RS09030 PF03483 B3/4 domain CP478_RS09030 PF03484 tRNA synthetase B5 domain CP478_RS09030 PF03147 Ferredoxin-fold anticodon binding domain CP478_RS09030 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CP478_RS09030 PF01588 Putative tRNA binding domain CP478_RS09035 PF00934 PE family CP478_RS09040 PF01118 Semialdehyde dehydrogenase, NAD binding domain CP478_RS09040 PF02774 Semialdehyde dehydrogenase, dimerisation domain CP478_RS09045 PF01960 ArgJ family CP478_RS09050 PF00696 Amino acid kinase family CP478_RS09055 PF00202 Aminotransferase class-III CP478_RS09060 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CP478_RS09060 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CP478_RS09065 PF01316 Arginine repressor, DNA binding domain CP478_RS09065 PF02863 Arginine repressor, C-terminal domain CP478_RS09070 PF00764 Arginosuccinate synthase CP478_RS09075 PF14698 Argininosuccinate lyase C-terminal CP478_RS09075 PF00206 Lyase CP478_RS09080 PF02797 Chalcone and stilbene synthases, C-terminal domain CP478_RS09080 PF00195 Chalcone and stilbene synthases, N-terminal domain CP478_RS09085 PF08240 Alcohol dehydrogenase GroES-like domain CP478_RS09085 PF16197 Ketoacyl-synthetase C-terminal extension CP478_RS09085 PF00109 Beta-ketoacyl synthase, N-terminal domain CP478_RS09085 PF02801 Beta-ketoacyl synthase, C-terminal domain CP478_RS09085 PF08659 KR domain CP478_RS09085 PF00550 Phosphopantetheine attachment site CP478_RS09085 PF00698 Acyl transferase domain CP478_RS09085 PF14765 Polyketide synthase dehydratase CP478_RS09090 PF14765 Polyketide synthase dehydratase CP478_RS09090 PF16197 Ketoacyl-synthetase C-terminal extension CP478_RS09090 PF00550 Phosphopantetheine attachment site CP478_RS09090 PF00698 Acyl transferase domain CP478_RS09090 PF00109 Beta-ketoacyl synthase, N-terminal domain CP478_RS09090 PF08659 KR domain CP478_RS09090 PF02801 Beta-ketoacyl synthase, C-terminal domain CP478_RS09090 PF08240 Alcohol dehydrogenase GroES-like domain CP478_RS09095 PF00698 Acyl transferase domain CP478_RS09095 PF08659 KR domain CP478_RS09095 PF14765 Polyketide synthase dehydratase CP478_RS09095 PF00550 Phosphopantetheine attachment site CP478_RS09095 PF08240 Alcohol dehydrogenase GroES-like domain CP478_RS09100 PF14765 Polyketide synthase dehydratase CP478_RS09100 PF08240 Alcohol dehydrogenase GroES-like domain CP478_RS09100 PF00550 Phosphopantetheine attachment site CP478_RS09100 PF00698 Acyl transferase domain CP478_RS09100 PF08659 KR domain CP478_RS09100 PF02801 Beta-ketoacyl synthase, C-terminal domain CP478_RS09100 PF14765 Polyketide synthase dehydratase CP478_RS09100 PF16197 Ketoacyl-synthetase C-terminal extension CP478_RS09100 PF00109 Beta-ketoacyl synthase, N-terminal domain CP478_RS09100 PF16197 Ketoacyl-synthetase C-terminal extension CP478_RS09100 PF00550 Phosphopantetheine attachment site CP478_RS09100 PF08659 KR domain CP478_RS09100 PF00109 Beta-ketoacyl synthase, N-terminal domain CP478_RS09100 PF02801 Beta-ketoacyl synthase, C-terminal domain CP478_RS09100 PF00698 Acyl transferase domain CP478_RS09100 PF08240 Alcohol dehydrogenase GroES-like domain CP478_RS09105 PF00195 Chalcone and stilbene synthases, N-terminal domain CP478_RS09105 PF02797 Chalcone and stilbene synthases, C-terminal domain CP478_RS09110 PF00067 Cytochrome P450 CP478_RS09115 PF00005 ABC transporter CP478_RS09115 PF16326 ABC transporter C-terminal domain CP478_RS09115 PF12848 ABC transporter CP478_RS09135 PF07690 Major Facilitator Superfamily CP478_RS09145 PF00581 Rhodanese-like domain CP478_RS09150 PF13545 Crp-like helix-turn-helix domain CP478_RS09150 PF00027 Cyclic nucleotide-binding domain CP478_RS09160 PF00578 AhpC/TSA family CP478_RS09170 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CP478_RS09170 PF02770 Acyl-CoA dehydrogenase, middle domain CP478_RS09170 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CP478_RS09195 PF03966 Trm112p-like protein CP478_RS09210 PF00005 ABC transporter CP478_RS09215 PF02245 Methylpurine-DNA glycosylase (MPG) CP478_RS09220 PF00579 tRNA synthetases class I (W and Y) CP478_RS09225 PF05305 Protein of unknown function (DUF732) CP478_RS09235 PF13344 Haloacid dehalogenase-like hydrolase CP478_RS09235 PF18407 GCN5-related N-acetyltransferase like domain CP478_RS09245 PF01479 S4 domain CP478_RS09245 PF01728 FtsJ-like methyltransferase CP478_RS09250 PF01513 ATP-NAD kinase CP478_RS09255 PF02463 RecF/RecN/SMC N terminal domain CP478_RS09265 PF11382 Copper transport outer membrane protein, MctB CP478_RS09270 PF06418 CTP synthase N-terminus CP478_RS09270 PF00117 Glutamine amidotransferase class-I CP478_RS09275 PF00293 NUDIX domain CP478_RS09280 PF02899 Phage integrase, N-terminal SAM-like domain CP478_RS09280 PF00589 Phage integrase family CP478_RS09285 PF02720 Domain of unknown function (DUF222) CP478_RS09290 PF01596 O-methyltransferase CP478_RS09295 PF00324 Amino acid permease CP478_RS09300 PF12484 Polymorphic PE/PPE proteins C terminal CP478_RS09300 PF00823 PPE family CP478_RS09305 PF00823 PPE family CP478_RS09305 PF12484 Polymorphic PE/PPE proteins C terminal CP478_RS09315 PF01740 STAS domain CP478_RS09315 PF00916 Sulfate permease family CP478_RS09320 PF13614 AAA domain CP478_RS09325 PF02616 Segregation and condensation protein ScpA CP478_RS09330 PF04079 Segregation and condensation complex subunit ScpB CP478_RS09335 PF00849 RNA pseudouridylate synthase CP478_RS09335 PF01479 S4 domain CP478_RS09340 PF02224 Cytidylate kinase CP478_RS09345 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CP478_RS09345 PF01926 50S ribosome-binding GTPase CP478_RS09355 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CP478_RS09355 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CP478_RS09370 PF05853 beta-keto acid cleavage enzyme CP478_RS09375 PF01614 Bacterial transcriptional regulator CP478_RS09375 PF09339 IclR helix-turn-helix domain CP478_RS09385 PF01850 PIN domain CP478_RS09410 PF01638 HxlR-like helix-turn-helix CP478_RS09430 PF04072 Leucine carboxyl methyltransferase CP478_RS09435 PF00144 Beta-lactamase CP478_RS09440 PF00171 Aldehyde dehydrogenase family CP478_RS09455 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CP478_RS09465 PF03595 Voltage-dependent anion channel CP478_RS09475 PF02613 Nitrate reductase delta subunit CP478_RS09475 PF00384 Molybdopterin oxidoreductase CP478_RS09475 PF02665 Nitrate reductase gamma subunit CP478_RS09480 PF07690 Major Facilitator Superfamily CP478_RS09485 PF08962 Domain of unknown function (DUF1876) CP478_RS09490 PF01740 STAS domain CP478_RS09490 PF00916 Sulfate permease family CP478_RS09495 PF07704 Rv0623-like transcription factor CP478_RS09510 PF13462 Thioredoxin CP478_RS09510 PF00069 Protein kinase domain CP478_RS09520 PF00293 NUDIX domain CP478_RS09525 PF00069 Protein kinase domain CP478_RS09530 PF00498 FHA domain CP478_RS09530 PF00005 ABC transporter CP478_RS09530 PF01061 ABC-2 type transporter CP478_RS09545 PF00501 AMP-binding enzyme CP478_RS09545 PF13193 AMP-binding enzyme C-terminal domain CP478_RS09550 PF01494 FAD binding domain CP478_RS09560 PF00823 PPE family CP478_RS09560 PF01469 Pentapeptide repeats (8 copies) CP478_RS09570 PF04185 Phosphoesterase family CP478_RS09580 PF01083 Cutinase CP478_RS09585 PF00934 PE family CP478_RS09590 PF06974 Protein of unknown function (DUF1298) CP478_RS09590 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain CP478_RS09615 PF00665 Integrase core domain CP478_RS09615 PF13276 HTH-like domain CP478_RS09630 PF02583 Metal-sensitive transcriptional repressor CP478_RS09635 PF02627 Carboxymuconolactone decarboxylase family CP478_RS09655 PF01565 FAD binding domain CP478_RS09655 PF04030 D-arabinono-1,4-lactone oxidase CP478_RS09680 PF00440 Bacterial regulatory proteins, tetR family CP478_RS09685 PF00067 Cytochrome P450 CP478_RS09705 PF02446 4-alpha-glucanotransferase CP478_RS09710 PF05108 Type VII secretion system ESX-1, transport TM domain B CP478_RS09715 PF01580 FtsK/SpoIIIE family CP478_RS09720 PF00067 Cytochrome P450 CP478_RS09730 PF00823 PPE family CP478_RS09730 PF12484 Polymorphic PE/PPE proteins C terminal CP478_RS09735 PF00934 PE family CP478_RS09740 PF00823 PPE family CP478_RS09740 PF12484 Polymorphic PE/PPE proteins C terminal CP478_RS09750 PF12484 Polymorphic PE/PPE proteins C terminal CP478_RS09750 PF00823 PPE family CP478_RS09755 PF00934 PE family CP478_RS09765 PF06013 Proteins of 100 residues with WXG CP478_RS09770 PF14011 EspG family CP478_RS09775 PF08817 WXG100 protein secretion system (Wss), protein YukD CP478_RS09780 PF00082 Subtilase family CP478_RS09785 PF11203 Putative type VII ESX secretion system translocon, EccE CP478_RS09790 PF17866 AAA lid domain CP478_RS09790 PF00004 ATPase family associated with various cellular activities (AAA) CP478_RS09800 PF00823 PPE family CP478_RS09800 PF08237 PE-PPE domain CP478_RS09810 PF12484 Polymorphic PE/PPE proteins C terminal CP478_RS09810 PF00823 PPE family CP478_RS09815 PF12484 Polymorphic PE/PPE proteins C terminal CP478_RS09815 PF00823 PPE family CP478_RS09820 PF00934 PE family CP478_RS09835 PF00934 PE family CP478_RS09840 PF00823 PPE family CP478_RS09840 PF12484 Polymorphic PE/PPE proteins C terminal CP478_RS09845 PF00823 PPE family CP478_RS09845 PF12484 Polymorphic PE/PPE proteins C terminal CP478_RS09850 PF12484 Polymorphic PE/PPE proteins C terminal CP478_RS09850 PF00823 PPE family CP478_RS09860 PF02308 MgtC family CP478_RS09865 PF07992 Pyridine nucleotide-disulphide oxidoreductase CP478_RS09870 PF13827 Domain of unknown function (DUF4189) CP478_RS09875 PF04116 Fatty acid hydroxylase superfamily CP478_RS09885 PF13305 Tetracyclin repressor-like, C-terminal domain CP478_RS09885 PF00440 Bacterial regulatory proteins, tetR family CP478_RS09900 PF00934 PE family CP478_RS09905 PF00005 ABC transporter CP478_RS09905 PF06472 ABC transporter transmembrane region 2 CP478_RS09910 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CP478_RS09910 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CP478_RS09910 PF00205 Thiamine pyrophosphate enzyme, central domain CP478_RS09915 PF07517 SecA DEAD-like domain CP478_RS09915 PF01043 SecA preprotein cross-linking domain CP478_RS09915 PF07516 SecA Wing and Scaffold domain CP478_RS09920 PF01066 CDP-alcohol phosphatidyltransferase CP478_RS09925 PF05949 Bacterial protein of unknown function (DUF881) CP478_RS09930 PF06947 Protein of unknown function (DUF1290) CP478_RS09935 PF05949 Bacterial protein of unknown function (DUF881) CP478_RS09940 PF01597 Glycine cleavage H-protein CP478_RS09945 PF00498 FHA domain CP478_RS09950 PF00376 MerR family regulatory protein CP478_RS09955 PF02577 Bifunctional nuclease CP478_RS09960 PF13411 MerR HTH family regulatory protein CP478_RS09965 PF02347 Glycine cleavage system P-protein CP478_RS09970 PF00561 alpha/beta hydrolase fold CP478_RS09975 PF12697 Alpha/beta hydrolase family CP478_RS09980 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CP478_RS09980 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CP478_RS09995 PF01274 Malate synthase CP478_RS10000 PF01850 PIN domain CP478_RS10010 PF00934 PE family CP478_RS10015 PF00571 CBS domain CP478_RS10015 PF01595 Cyclin M transmembrane N-terminal domain CP478_RS10020 PF03471 Transporter associated domain CP478_RS10020 PF00571 CBS domain CP478_RS10020 PF01595 Cyclin M transmembrane N-terminal domain CP478_RS10025 PF00571 CBS domain CP478_RS10025 PF00478 IMP dehydrogenase / GMP reductase domain CP478_RS10030 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CP478_RS10030 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CP478_RS10040 PF03965 Penicillinase repressor CP478_RS10045 PF03061 Thioesterase superfamily CP478_RS10050 PF00547 Urease, gamma subunit CP478_RS10055 PF00699 Urease beta subunit CP478_RS10060 PF01979 Amidohydrolase family CP478_RS10060 PF00449 Urease alpha-subunit, N-terminal domain CP478_RS10065 PF01730 UreF CP478_RS10070 PF02492 CobW/HypB/UreG, nucleotide-binding domain CP478_RS10085 PF00296 Luciferase-like monooxygenase CP478_RS10100 PF00528 Binding-protein-dependent transport system inner membrane component CP478_RS10105 PF03459 TOBE domain CP478_RS10105 PF00005 ABC transporter CP478_RS10110 PF07174 Fibronectin-attachment protein (FAP) CP478_RS10120 PF08240 Alcohol dehydrogenase GroES-like domain CP478_RS10135 PF00106 short chain dehydrogenase CP478_RS10140 PF02515 CoA-transferase family III CP478_RS10150 PF02803 Thiolase, C-terminal domain CP478_RS10150 PF00108 Thiolase, N-terminal domain CP478_RS10160 PF07992 Pyridine nucleotide-disulphide oxidoreductase CP478_RS10160 PF14759 Reductase C-terminal CP478_RS10170 PF04075 F420H(2)-dependent quinone reductase CP478_RS10175 PF01070 FMN-dependent dehydrogenase CP478_RS10205 PF00210 Ferritin-like domain CP478_RS10210 PF07690 Major Facilitator Superfamily CP478_RS10215 PF03951 Glutamine synthetase, beta-Grasp domain CP478_RS10215 PF00120 Glutamine synthetase, catalytic domain CP478_RS10225 PF00067 Cytochrome P450 CP478_RS10230 PF05481 Mycobacterium 19 kDa lipoprotein antigen CP478_RS10235 PF00106 short chain dehydrogenase CP478_RS10245 PF06737 Transglycosylase-like domain CP478_RS10250 PF01817 Chorismate mutase type II CP478_RS10255 PF00756 Putative esterase CP478_RS10280 PF04072 Leucine carboxyl methyltransferase CP478_RS10285 PF04072 Leucine carboxyl methyltransferase CP478_RS10310 PF03060 Nitronate monooxygenase CP478_RS10325 PF04072 Leucine carboxyl methyltransferase CP478_RS10330 PF02580 D-Tyr-tRNA(Tyr) deacylase CP478_RS10335 PF01910 Thiamine-binding protein CP478_RS10340 PF01661 Macro domain CP478_RS10345 PF00211 Adenylate and Guanylate cyclase catalytic domain CP478_RS10345 PF00072 Response regulator receiver domain CP478_RS10350 PF02464 Competence-damaged protein CP478_RS10350 PF00994 Probable molybdopterin binding domain CP478_RS10355 PF07690 Major Facilitator Superfamily CP478_RS10360 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV CP478_RS10365 PF01740 STAS domain CP478_RS10370 PF01266 FAD dependent oxidoreductase CP478_RS10385 PF00141 Peroxidase CP478_RS10390 PF01475 Ferric uptake regulator family CP478_RS10395 PF01161 Phosphatidylethanolamine-binding protein CP478_RS10400 PF01161 Phosphatidylethanolamine-binding protein CP478_RS10405 PF08659 KR domain CP478_RS10405 PF02801 Beta-ketoacyl synthase, C-terminal domain CP478_RS10405 PF00109 Beta-ketoacyl synthase, N-terminal domain CP478_RS10405 PF16197 Ketoacyl-synthetase C-terminal extension CP478_RS10405 PF08240 Alcohol dehydrogenase GroES-like domain CP478_RS10405 PF08990 Erythronolide synthase docking CP478_RS10405 PF14765 Polyketide synthase dehydratase CP478_RS10405 PF00698 Acyl transferase domain CP478_RS10405 PF00550 Phosphopantetheine attachment site CP478_RS10420 PF00463 Isocitrate lyase family CP478_RS10425 PF00463 Isocitrate lyase family CP478_RS10430 PF01469 Pentapeptide repeats (8 copies) CP478_RS10430 PF00823 PPE family CP478_RS10440 PF00823 PPE family CP478_RS10440 PF01469 Pentapeptide repeats (8 copies) CP478_RS10460 PF11954 Domain of unknown function (DUF3471) CP478_RS10460 PF00144 Beta-lactamase CP478_RS10465 PF00144 Beta-lactamase CP478_RS10475 PF00501 AMP-binding enzyme CP478_RS10480 PF09167 Domain of unknown function (DUF1942) CP478_RS10505 PF12833 Helix-turn-helix domain CP478_RS10505 PF01965 DJ-1/PfpI family CP478_RS10510 PF08534 Redoxin CP478_RS10515 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CP478_RS10515 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CP478_RS10515 PF02770 Acyl-CoA dehydrogenase, middle domain CP478_RS10520 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CP478_RS10520 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CP478_RS10520 PF02770 Acyl-CoA dehydrogenase, middle domain CP478_RS10525 PF00378 Enoyl-CoA hydratase/isomerase CP478_RS10535 PF00296 Luciferase-like monooxygenase CP478_RS10540 PF00111 2Fe-2S iron-sulfur cluster binding domain CP478_RS10540 PF00175 Oxidoreductase NAD-binding domain CP478_RS10540 PF00970 Oxidoreductase FAD-binding domain CP478_RS10545 PF00561 alpha/beta hydrolase fold CP478_RS10550 PF01613 Flavin reductase like domain CP478_RS10555 PF00925 GTP cyclohydrolase II CP478_RS10555 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CP478_RS10565 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system CP478_RS10575 PF07517 SecA DEAD-like domain CP478_RS10575 PF07516 SecA Wing and Scaffold domain CP478_RS10575 PF01043 SecA preprotein cross-linking domain CP478_RS10575 PF02810 SEC-C motif CP478_RS10580 PF02720 Domain of unknown function (DUF222) CP478_RS10580 PF01844 HNH endonuclease CP478_RS10635 PF05973 Phage derived protein Gp49-like (DUF891) CP478_RS10640 PF01381 Helix-turn-helix CP478_RS10655 PF05016 ParE toxin of type II toxin-antitoxin system, parDE CP478_RS10660 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH CP478_RS10670 PF01850 PIN domain CP478_RS10680 PF00440 Bacterial regulatory proteins, tetR family CP478_RS10725 PF02470 MlaD protein CP478_RS10770 PF13520 Amino acid permease CP478_RS10775 PF11738 Protein of unknown function (DUF3298) CP478_RS10780 PF00268 Ribonucleotide reductase, small chain CP478_RS10785 PF01850 PIN domain CP478_RS10790 PF07704 Rv0623-like transcription factor CP478_RS10795 PF00934 PE family CP478_RS10800 PF01083 Cutinase CP478_RS10805 PF02594 Uncharacterised ACR, YggU family COG1872 CP478_RS10810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CP478_RS10810 PF03466 LysR substrate binding domain CP478_RS10815 PF01810 LysE type translocator CP478_RS10820 PF00553 Cellulose binding domain CP478_RS10825 PF00398 Ribosomal RNA adenine dimethylase CP478_RS10835 PF08808 RES domain CP478_RS10840 PF09722 Protein of unknown function (DUF2384) CP478_RS10855 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system CP478_RS10860 PF01402 Ribbon-helix-helix protein, copG family CP478_RS10870 PF07371 Protein of unknown function (DUF1490) CP478_RS10875 PF01022 Bacterial regulatory protein, arsR family CP478_RS10880 PF01814 Hemerythrin HHE cation binding domain CP478_RS10885 PF00582 Universal stress protein family CP478_RS10890 PF00690 Cation transporter/ATPase, N-terminus CP478_RS10890 PF00689 Cation transporting ATPase, C-terminus CP478_RS10900 PF13520 Amino acid permease CP478_RS10910 PF01643 Acyl-ACP thioesterase CP478_RS10920 PF08241 Methyltransferase domain CP478_RS10930 PF00582 Universal stress protein family CP478_RS10935 PF03633 Glycosyl hydrolase family 65, C-terminal domain CP478_RS10935 PF03632 Glycosyl hydrolase family 65 central catalytic domain CP478_RS10935 PF03636 Glycosyl hydrolase family 65, N-terminal domain CP478_RS10935 PF02358 Trehalose-phosphatase CP478_RS10940 PF00037 4Fe-4S binding domain CP478_RS10945 PF13635 Domain of unknown function (DUF4143) CP478_RS10945 PF13173 AAA domain CP478_RS10950 PF09957 Bacterial antitoxin of type II TA system, VapB CP478_RS10955 PF01850 PIN domain CP478_RS10960 PF12802 MarR family CP478_RS10965 PF07166 Protein of unknown function (DUF1398) CP478_RS11015 PF04255 Protein of unknown function (DUF433) CP478_RS11020 PF18478 PIN like domain CP478_RS11030 PF13744 Helix-turn-helix domain CP478_RS11035 PF05973 Phage derived protein Gp49-like (DUF891) CP478_RS11050 PF08463 EcoEI R protein C-terminal CP478_RS11050 PF00271 Helicase conserved C-terminal domain CP478_RS11050 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) CP478_RS11050 PF04851 Type III restriction enzyme, res subunit CP478_RS11055 PF16916 Dimerisation domain of Zinc Transporter CP478_RS11055 PF01545 Cation efflux family CP478_RS11060 PF00582 Universal stress protein family CP478_RS11065 PF13185 GAF domain CP478_RS11065 PF07730 Histidine kinase CP478_RS11065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CP478_RS11065 PF13492 GAF domain CP478_RS11070 PF00582 Universal stress protein family CP478_RS11075 PF00294 pfkB family carbohydrate kinase CP478_RS11080 PF00156 Phosphoribosyl transferase domain CP478_RS11080 PF05139 Erythromycin esterase CP478_RS11085 PF00011 Hsp20/alpha crystallin family CP478_RS11100 PF01022 Bacterial regulatory protein, arsR family CP478_RS11115 PF01734 Patatin-like phospholipase CP478_RS11120 PF17912 MalK OB fold domain CP478_RS11120 PF00005 ABC transporter CP478_RS11125 PF00528 Binding-protein-dependent transport system inner membrane component CP478_RS11130 PF00528 Binding-protein-dependent transport system inner membrane component CP478_RS11135 PF01547 Bacterial extracellular solute-binding protein CP478_RS11145 PF00857 Isochorismatase family CP478_RS11155 PF00135 Carboxylesterase family CP478_RS11165 PF00391 PEP-utilising enzyme, mobile domain CP478_RS11165 PF01370 NAD dependent epimerase/dehydratase family CP478_RS11170 PF08240 Alcohol dehydrogenase GroES-like domain CP478_RS11170 PF14765 Polyketide synthase dehydratase CP478_RS11170 PF00698 Acyl transferase domain CP478_RS11170 PF00550 Phosphopantetheine attachment site CP478_RS11170 PF02801 Beta-ketoacyl synthase, C-terminal domain CP478_RS11170 PF08659 KR domain CP478_RS11170 PF16197 Ketoacyl-synthetase C-terminal extension CP478_RS11170 PF00109 Beta-ketoacyl synthase, N-terminal domain CP478_RS11180 PF13397 RNA polymerase-binding protein CP478_RS11185 PF00795 Carbon-nitrogen hydrolase CP478_RS11185 PF00535 Glycosyl transferase family 2 CP478_RS11190 PF07969 Amidohydrolase family CP478_RS11200 PF01738 Dienelactone hydrolase family CP478_RS11205 PF01084 Ribosomal protein S18 CP478_RS11210 PF00253 Ribosomal protein S14p/S29e CP478_RS11215 PF00471 Ribosomal protein L33 CP478_RS11220 PF00830 Ribosomal L28 family CP478_RS11240 PF02514 CobN/Magnesium Chelatase CP478_RS11250 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system CP478_RS11255 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CP478_RS11260 PF02570 Precorrin-8X methylmutase CP478_RS11265 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CP478_RS11270 PF13847 Methyltransferase domain CP478_RS11280 PF04542 Sigma-70 region 2 CP478_RS11280 PF08281 Sigma-70, region 4 CP478_RS11285 PF02571 Precorrin-6x reductase CbiJ/CobK CP478_RS11290 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CP478_RS11295 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CP478_RS11300 PF00106 short chain dehydrogenase CP478_RS11305 PF01243 Pyridoxamine 5'-phosphate oxidase CP478_RS11330 PF10817 Protein of unknown function (DUF2563) CP478_RS11335 PF06259 Alpha/beta hydrolase CP478_RS11355 PF18645 Family of unknown function (DUF5631) CP478_RS11355 PF18646 Family of unknown function (DUF5632) CP478_RS11370 PF13276 HTH-like domain CP478_RS11375 PF14032 PknH-like extracellular domain CP478_RS11375 PF00069 Protein kinase domain CP478_RS11380 PF01321 Creatinase/Prolidase N-terminal domain CP478_RS11380 PF00557 Metallopeptidase family M24 CP478_RS11385 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CP478_RS11385 PF01367 5'-3' exonuclease, C-terminal SAM fold CP478_RS11390 PF14230 Domain of unknown function (DUF4333) CP478_RS11395 PF00270 DEAD/DEAH box helicase CP478_RS11395 PF08148 DSHCT (NUC185) domain CP478_RS11395 PF00271 Helicase conserved C-terminal domain CP478_RS11400 PF00902 Sec-independent protein translocase protein (TatC) CP478_RS11405 PF02416 mttA/Hcf106 family CP478_RS11410 PF13280 WYL domain CP478_RS11415 PF13280 WYL domain CP478_RS11420 PF03136 Pup-ligase protein CP478_RS11430 PF02720 Domain of unknown function (DUF222) CP478_RS11435 PF00176 SNF2 family N-terminal domain CP478_RS11435 PF00271 Helicase conserved C-terminal domain CP478_RS11435 PF12419 SNF2 Helicase protein CP478_RS11440 PF04434 SWIM zinc finger CP478_RS11445 PF01850 PIN domain CP478_RS11455 PF00227 Proteasome subunit CP478_RS11475 PF00823 PPE family CP478_RS11480 PF00227 Proteasome subunit CP478_RS11485 PF00227 Proteasome subunit CP478_RS11490 PF05639 Pup-like protein CP478_RS11495 PF03136 Pup-ligase protein CP478_RS11510 PF00004 ATPase family associated with various cellular activities (AAA) CP478_RS11510 PF16450 Proteasomal ATPase OB C-terminal domain CP478_RS11510 PF17758 Proteasomal ATPase OB N-terminal domain CP478_RS11525 PF08704 tRNA methyltransferase complex GCD14 subunit CP478_RS11540 PF08029 HisG, C-terminal domain CP478_RS11540 PF01634 ATP phosphoribosyltransferase CP478_RS11545 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CP478_RS11555 PF02574 Homocysteine S-methyltransferase CP478_RS11555 PF00809 Pterin binding enzyme CP478_RS11555 PF02965 Vitamin B12 dependent methionine synthase, activation domain CP478_RS11555 PF02607 B12 binding domain CP478_RS11555 PF02310 B12 binding domain CP478_RS11570 PF00324 Amino acid permease CP478_RS11585 PF01406 tRNA synthetases class I (C) catalytic domain CP478_RS11590 PF00459 Inositol monophosphatase family CP478_RS11615 PF02673 Bacitracin resistance protein BacA CP478_RS11635 PF01180 Dihydroorotate dehydrogenase CP478_RS11640 PF01161 Phosphatidylethanolamine-binding protein CP478_RS11645 PF01546 Peptidase family M20/M25/M40 CP478_RS11645 PF07687 Peptidase dimerisation domain CP478_RS11655 PF05016 ParE toxin of type II toxin-antitoxin system, parDE CP478_RS11665 PF00156 Phosphoribosyl transferase domain CP478_RS11665 PF05139 Erythromycin esterase CP478_RS11675 PF05103 DivIVA protein CP478_RS11685 PF04472 Cell division protein SepF CP478_RS11690 PF01168 Alanine racemase, N-terminal domain CP478_RS11695 PF02578 Multi-copper polyphenol oxidoreductase laccase CP478_RS11700 PF00091 Tubulin/FtsZ family, GTPase domain CP478_RS11700 PF12327 FtsZ family, C-terminal domain CP478_RS11705 PF03799 Cell division protein FtsQ CP478_RS11705 PF08478 POTRA domain, FtsQ-type CP478_RS11710 PF01225 Mur ligase family, catalytic domain CP478_RS11710 PF08245 Mur ligase middle domain CP478_RS11710 PF02875 Mur ligase family, glutamate ligase domain CP478_RS11715 PF04101 Glycosyltransferase family 28 C-terminal domain CP478_RS11715 PF03033 Glycosyltransferase family 28 N-terminal domain CP478_RS11720 PF01098 Cell cycle protein CP478_RS11725 PF02875 Mur ligase family, glutamate ligase domain CP478_RS11725 PF08245 Mur ligase middle domain CP478_RS11730 PF00953 Glycosyl transferase family 4 CP478_RS11730 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CP478_RS11735 PF02875 Mur ligase family, glutamate ligase domain CP478_RS11735 PF01225 Mur ligase family, catalytic domain CP478_RS11735 PF08245 Mur ligase middle domain CP478_RS11740 PF08245 Mur ligase middle domain CP478_RS11740 PF01225 Mur ligase family, catalytic domain CP478_RS11740 PF02875 Mur ligase family, glutamate ligase domain CP478_RS11755 PF00296 Luciferase-like monooxygenase CP478_RS11760 PF00934 PE family CP478_RS11765 PF00905 Penicillin binding protein transpeptidase domain CP478_RS11765 PF03717 Penicillin-binding Protein dimerisation domain CP478_RS11775 PF01795 MraW methylase family CP478_RS11780 PF02381 MraZ protein, putative antitoxin-like CP478_RS11815 PF00348 Polyprenyl synthetase CP478_RS11825 PF18367 Rv2175c C-terminal domain of unknown function CP478_RS11830 PF00069 Protein kinase domain CP478_RS11845 PF01474 Class-II DAHP synthetase family CP478_RS11850 PF16473 3' exoribonuclease, RNase T-like CP478_RS11860 PF09594 Glycosyltransferase family 87 CP478_RS11875 PF02374 Anion-transporting ATPase CP478_RS11890 PF00501 AMP-binding enzyme CP478_RS11895 PF00534 Glycosyl transferases group 1 CP478_RS11895 PF13439 Glycosyltransferase Family 4 CP478_RS11905 PF00877 NlpC/P60 family CP478_RS11915 PF00929 Exonuclease CP478_RS11915 PF01541 GIY-YIG catalytic domain CP478_RS11920 PF02885 Glycosyl transferase family, helical bundle domain CP478_RS11920 PF00591 Glycosyl transferase family, a/b domain CP478_RS11925 PF00510 Cytochrome c oxidase subunit III CP478_RS11930 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CP478_RS11930 PF00034 Cytochrome c CP478_RS11935 PF00355 Rieske [2Fe-2S] domain CP478_RS11940 PF13631 Cytochrome b(N-terminal)/b6/petB CP478_RS11945 PF10812 Protein of unknown function (DUF2561) CP478_RS11950 PF05423 Mycobacterium membrane protein CP478_RS11955 PF12270 Cytochrome c oxidase subunit IV CP478_RS11960 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CP478_RS11965 PF00733 Asparagine synthase CP478_RS11965 PF13537 Glutamine amidotransferase domain CP478_RS11970 PF00294 pfkB family carbohydrate kinase CP478_RS11980 PF01521 Iron-sulphur cluster biosynthesis CP478_RS11985 PF02595 Glycerate kinase family CP478_RS11990 PF11241 Protein of unknown function (DUF3043) CP478_RS11995 PF02277 Phosphoribosyltransferase CP478_RS12000 PF02654 Cobalamin-5-phosphate synthase CP478_RS12010 PF01063 Amino-transferase class IV CP478_RS12015 PF01571 Aminomethyltransferase folate-binding domain CP478_RS12015 PF08669 Glycine cleavage T-protein C-terminal barrel domain CP478_RS12020 PF00211 Adenylate and Guanylate cyclase catalytic domain CP478_RS12020 PF16701 Adenylate cyclase regulatory domain CP478_RS12025 PF00883 Cytosol aminopeptidase family, catalytic domain CP478_RS12025 PF02789 Cytosol aminopeptidase family, N-terminal domain CP478_RS12030 PF00106 short chain dehydrogenase CP478_RS12030 PF00561 alpha/beta hydrolase fold CP478_RS12035 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CP478_RS12035 PF00364 Biotin-requiring enzyme CP478_RS12035 PF02817 e3 binding domain CP478_RS12040 PF01370 NAD dependent epimerase/dehydratase family CP478_RS12040 PF08338 Domain of unknown function (DUF1731) CP478_RS12045 PF03099 Biotin/lipoate A/B protein ligase family CP478_RS12050 PF04055 Radical SAM superfamily CP478_RS12050 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CP478_RS12055 PF13829 Domain of unknown function (DUF4191) CP478_RS12065 PF00120 Glutamine synthetase, catalytic domain CP478_RS12065 PF03951 Glutamine synthetase, beta-Grasp domain CP478_RS12070 PF08335 GlnD PII-uridylyltransferase CP478_RS12070 PF03710 Glutamate-ammonia ligase adenylyltransferase CP478_RS12075 PF00120 Glutamine synthetase, catalytic domain CP478_RS12075 PF03951 Glutamine synthetase, beta-Grasp domain CP478_RS12080 PF00561 alpha/beta hydrolase fold CP478_RS12080 PF08386 TAP-like protein CP478_RS12085 PF00561 alpha/beta hydrolase fold CP478_RS12090 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain CP478_RS12090 PF06974 Protein of unknown function (DUF1298) CP478_RS12095 PF02548 Ketopantoate hydroxymethyltransferase CP478_RS12100 PF01928 CYTH domain CP478_RS12100 PF05235 CHAD domain CP478_RS12110 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA CP478_RS12115 PF13456 Reverse transcriptase-like CP478_RS12115 PF00300 Histidine phosphatase superfamily (branch 1) CP478_RS12120 PF02591 C4-type zinc ribbon domain CP478_RS12125 PF01784 NIF3 (NGG1p interacting factor 3) CP478_RS12130 PF00155 Aminotransferase class I and II CP478_RS12145 PF13419 Haloacid dehalogenase-like hydrolase CP478_RS12150 PF01451 Low molecular weight phosphotyrosine protein phosphatase CP478_RS12155 PF02104 SURF1 family CP478_RS12160 PF03186 CobD/Cbib protein CP478_RS12165 PF09995 Uncharacterized protein conserved in bacteria (DUF2236) CP478_RS12180 PF00578 AhpC/TSA family CP478_RS12185 PF11253 Protein of unknown function (DUF3052) CP478_RS12195 PF17831 Pyruvate dehydrogenase E1 component middle domain CP478_RS12195 PF00456 Transketolase, thiamine diphosphate binding domain CP478_RS12200 PF13556 PucR C-terminal helix-turn-helix domain CP478_RS12200 PF17853 GGDEF-like domain CP478_RS12205 PF00698 Acyl transferase domain CP478_RS12210 PF00550 Phosphopantetheine attachment site CP478_RS12215 PF02801 Beta-ketoacyl synthase, C-terminal domain CP478_RS12215 PF00109 Beta-ketoacyl synthase, N-terminal domain CP478_RS12220 PF00109 Beta-ketoacyl synthase, N-terminal domain CP478_RS12220 PF02801 Beta-ketoacyl synthase, C-terminal domain CP478_RS12225 PF01039 Carboxyl transferase domain CP478_RS12235 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CP478_RS12235 PF01266 FAD dependent oxidoreductase CP478_RS12240 PF00440 Bacterial regulatory proteins, tetR family CP478_RS12245 PF02913 FAD linked oxidases, C-terminal domain CP478_RS12245 PF01565 FAD binding domain CP478_RS12250 PF00781 Diacylglycerol kinase catalytic domain CP478_RS12285 PF13847 Methyltransferase domain CP478_RS12295 PF00107 Zinc-binding dehydrogenase CP478_RS12295 PF08240 Alcohol dehydrogenase GroES-like domain CP478_RS12305 PF00795 Carbon-nitrogen hydrolase CP478_RS12310 PF00106 short chain dehydrogenase CP478_RS12320 PF07690 Major Facilitator Superfamily CP478_RS12325 PF00067 Cytochrome P450 CP478_RS12335 PF00067 Cytochrome P450 CP478_RS12350 PF10905 Protein of unknown function (DUF2695) CP478_RS12355 PF02656 Domain of unknown function (DUF202) CP478_RS12360 PF02656 Domain of unknown function (DUF202) CP478_RS12370 PF16715 Cyclodipeptide synthase CP478_RS12375 PF00067 Cytochrome P450 CP478_RS12380 PF03009 Glycerophosphoryl diester phosphodiesterase family CP478_RS12390 PF01565 FAD binding domain CP478_RS12390 PF02913 FAD linked oxidases, C-terminal domain CP478_RS12395 PF01384 Phosphate transporter family CP478_RS12400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CP478_RS12400 PF03466 LysR substrate binding domain CP478_RS12410 PF07859 alpha/beta hydrolase fold CP478_RS12415 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain CP478_RS12415 PF06974 Protein of unknown function (DUF1298) CP478_RS12420 PF01323 DSBA-like thioredoxin domain CP478_RS12425 PF00999 Sodium/hydrogen exchanger family CP478_RS12435 PF02611 CDP-diacylglycerol pyrophosphatase CP478_RS12440 PF05481 Mycobacterium 19 kDa lipoprotein antigen CP478_RS12445 PF00581 Rhodanese-like domain CP478_RS12450 PF01048 Phosphorylase superfamily CP478_RS12455 PF01048 Phosphorylase superfamily CP478_RS12465 PF00155 Aminotransferase class I and II CP478_RS12470 PF03691 Uncharacterised protein family (UPF0167) CP478_RS12475 PF00561 alpha/beta hydrolase fold CP478_RS12485 PF00248 Aldo/keto reductase family CP478_RS12490 PF00183 Hsp90 protein CP478_RS12495 PF00753 Metallo-beta-lactamase superfamily CP478_RS12500 PF01083 Cutinase CP478_RS12505 PF08940 Domain of unknown function (DUF1918) CP478_RS12535 PF09335 SNARE associated Golgi protein CP478_RS12540 PF12146 Serine aminopeptidase, S33 CP478_RS12565 PF04255 Protein of unknown function (DUF433) CP478_RS12580 PF02899 Phage integrase, N-terminal SAM-like domain CP478_RS12580 PF00589 Phage integrase family CP478_RS12600 PF12728 Helix-turn-helix domain CP478_RS12630 PF00528 Binding-protein-dependent transport system inner membrane component CP478_RS12635 PF00528 Binding-protein-dependent transport system inner membrane component CP478_RS12645 PF00582 Universal stress protein family CP478_RS12650 PF13520 Amino acid permease CP478_RS12655 PF00202 Aminotransferase class-III CP478_RS12660 PF00202 Aminotransferase class-III CP478_RS12670 PF01037 Lrp/AsnC ligand binding domain CP478_RS12670 PF13404 AsnC-type helix-turn-helix domain CP478_RS12675 PF02361 Cobalt transport protein CP478_RS12680 PF00005 ABC transporter CP478_RS12695 PF00934 PE family CP478_RS12700 PF07690 Major Facilitator Superfamily CP478_RS12705 PF14041 LppP/LprE lipoprotein CP478_RS12720 PF00390 Malic enzyme, N-terminal domain CP478_RS12720 PF03949 Malic enzyme, NAD binding domain CP478_RS12725 PF07690 Major Facilitator Superfamily CP478_RS12730 PF00291 Pyridoxal-phosphate dependent enzyme CP478_RS12735 PF00132 Bacterial transferase hexapeptide (six repeats) CP478_RS12750 PF00899 ThiF family CP478_RS12760 PF03176 MMPL family CP478_RS12765 PF00934 PE family CP478_RS12785 PF01807 CHC2 zinc finger CP478_RS12785 PF10410 DnaB-helicase binding domain of primase CP478_RS12785 PF08278 DNA primase DnaG DnaB-binding CP478_RS12785 PF08275 DNA primase catalytic core, N-terminal domain CP478_RS12785 PF13662 Toprim domain CP478_RS12790 PF13286 Phosphohydrolase-associated domain CP478_RS12790 PF01966 HD domain CP478_RS12795 PF04536 TPM domain CP478_RS12800 PF06013 Proteins of 100 residues with WXG CP478_RS12805 PF06013 Proteins of 100 residues with WXG CP478_RS12815 PF04185 Phosphoesterase family CP478_RS12820 PF04185 Phosphoesterase family CP478_RS12825 PF04185 Phosphoesterase family CP478_RS12830 PF12484 Polymorphic PE/PPE proteins C terminal CP478_RS12830 PF00823 PPE family CP478_RS12855 PF01469 Pentapeptide repeats (8 copies) CP478_RS12855 PF00823 PPE family CP478_RS12860 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CP478_RS12860 PF03129 Anticodon binding domain CP478_RS12865 PF01022 Bacterial regulatory protein, arsR family CP478_RS12870 PF01475 Ferric uptake regulator family CP478_RS12880 PF01255 Putative undecaprenyl diphosphate synthase CP478_RS12885 PF11967 Recombination protein O N terminal CP478_RS12885 PF02565 Recombination protein O C terminal CP478_RS12890 PF01425 Amidase CP478_RS12895 PF07650 KH domain CP478_RS12895 PF01926 50S ribosome-binding GTPase CP478_RS12905 PF00571 CBS domain CP478_RS12905 PF03471 Transporter associated domain CP478_RS12905 PF01595 Cyclin M transmembrane N-terminal domain CP478_RS12910 PF02130 Uncharacterized protein family UPF0054 CP478_RS12915 PF02562 PhoH-like protein CP478_RS12930 PF00934 PE family CP478_RS12935 PF04452 RNA methyltransferase CP478_RS12940 PF01556 DnaJ C terminal domain CP478_RS12940 PF00226 DnaJ domain CP478_RS12940 PF00684 DnaJ central domain CP478_RS12945 PF01628 HrcA protein C terminal domain CP478_RS12960 PF03621 MbtH-like protein CP478_RS12965 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) CP478_RS12970 PF00501 AMP-binding enzyme CP478_RS12970 PF07993 Male sterility protein CP478_RS12970 PF00668 Condensation domain CP478_RS12970 PF13193 AMP-binding enzyme C-terminal domain CP478_RS12970 PF00550 Phosphopantetheine attachment site CP478_RS12975 PF00975 Thioesterase domain CP478_RS12975 PF00550 Phosphopantetheine attachment site CP478_RS12975 PF00668 Condensation domain CP478_RS12975 PF13193 AMP-binding enzyme C-terminal domain CP478_RS12975 PF00501 AMP-binding enzyme CP478_RS12980 PF00975 Thioesterase domain CP478_RS12980 PF16197 Ketoacyl-synthetase C-terminal extension CP478_RS12980 PF08659 KR domain CP478_RS12980 PF02801 Beta-ketoacyl synthase, C-terminal domain CP478_RS12980 PF00109 Beta-ketoacyl synthase, N-terminal domain CP478_RS12980 PF00550 Phosphopantetheine attachment site CP478_RS12980 PF08990 Erythronolide synthase docking CP478_RS12980 PF00698 Acyl transferase domain CP478_RS12985 PF00109 Beta-ketoacyl synthase, N-terminal domain CP478_RS12985 PF02801 Beta-ketoacyl synthase, C-terminal domain CP478_RS12985 PF08659 KR domain CP478_RS12985 PF00698 Acyl transferase domain CP478_RS12985 PF00550 Phosphopantetheine attachment site CP478_RS12985 PF14765 Polyketide synthase dehydratase CP478_RS12985 PF16197 Ketoacyl-synthetase C-terminal extension CP478_RS12990 PF13193 AMP-binding enzyme C-terminal domain CP478_RS12990 PF00501 AMP-binding enzyme CP478_RS12990 PF00550 Phosphopantetheine attachment site CP478_RS12990 PF00975 Thioesterase domain CP478_RS12990 PF00668 Condensation domain CP478_RS12995 PF13193 AMP-binding enzyme C-terminal domain CP478_RS12995 PF00501 AMP-binding enzyme CP478_RS13005 PF00425 chorismate binding enzyme CP478_RS13020 PF04055 Radical SAM superfamily CP478_RS13025 PF06737 Transglycosylase-like domain CP478_RS13040 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CP478_RS13040 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CP478_RS13045 PF01507 Phosphoadenosine phosphosulfate reductase family CP478_RS13060 PF03169 OPT oligopeptide transporter protein CP478_RS13075 PF00934 PE family CP478_RS13080 PF00005 ABC transporter CP478_RS13080 PF12857 TOBE-like domain CP478_RS13085 PF00528 Binding-protein-dependent transport system inner membrane component CP478_RS13090 PF00528 Binding-protein-dependent transport system inner membrane component CP478_RS13110 PF00723 Glycosyl hydrolases family 15 CP478_RS13120 PF00679 Elongation factor G C-terminus CP478_RS13120 PF00009 Elongation factor Tu GTP binding domain CP478_RS13120 PF06421 GTP-binding protein LepA C-terminus CP478_RS13135 PF12706 Beta-lactamase superfamily domain CP478_RS13155 PF08379 Bacterial transglutaminase-like N-terminal region CP478_RS13155 PF01841 Transglutaminase-like superfamily CP478_RS13165 PF04174 A circularly permuted ATPgrasp CP478_RS13170 PF01649 Ribosomal protein S20 CP478_RS13185 PF10531 SLBB domain CP478_RS13190 PF13530 Sterol carrier protein domain CP478_RS13190 PF17668 Acetyltransferase (GNAT) domain CP478_RS13195 PF02645 Uncharacterised protein, DegV family COG1307 CP478_RS13205 PF00300 Histidine phosphatase superfamily (branch 1) CP478_RS13215 PF01467 Cytidylyltransferase-like CP478_RS13245 PF10431 C-terminal, D2-small domain, of ClpB protein CP478_RS13245 PF17871 AAA lid domain CP478_RS13245 PF07724 AAA domain (Cdc48 subfamily) CP478_RS13245 PF00004 ATPase family associated with various cellular activities (AAA) CP478_RS13245 PF02861 Clp amino terminal domain, pathogenicity island component CP478_RS13250 PF00171 Aldehyde dehydrogenase family CP478_RS13255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CP478_RS13255 PF03466 LysR substrate binding domain CP478_RS13260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CP478_RS13260 PF03466 LysR substrate binding domain CP478_RS13265 PF00578 AhpC/TSA family CP478_RS13270 PF02627 Carboxymuconolactone decarboxylase family CP478_RS13275 PF00823 PPE family CP478_RS13280 PF00934 PE family CP478_RS13295 PF00924 Mechanosensitive ion channel CP478_RS13300 PF18698 Histidine kinase sensor domain CP478_RS13300 PF00512 His Kinase A (phospho-acceptor) domain CP478_RS13300 PF00672 HAMP domain CP478_RS13300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CP478_RS13310 PF00294 pfkB family carbohydrate kinase CP478_RS13325 PF02540 NAD synthase CP478_RS13325 PF00795 Carbon-nitrogen hydrolase CP478_RS13330 PF01472 PUA domain CP478_RS13330 PF00696 Amino acid kinase family CP478_RS13335 PF01018 GTP1/OBG CP478_RS13335 PF09269 Domain of unknown function (DUF1967) CP478_RS13335 PF01926 50S ribosome-binding GTPase CP478_RS13340 PF01016 Ribosomal L27 protein CP478_RS13345 PF00829 Ribosomal prokaryotic L21 protein CP478_RS13355 PF00375 Sodium:dicarboxylate symporter family CP478_RS13360 PF10150 Ribonuclease E/G family CP478_RS13365 PF00334 Nucleoside diphosphate kinase CP478_RS13375 PF08245 Mur ligase middle domain CP478_RS13375 PF02875 Mur ligase family, glutamate ligase domain CP478_RS13380 PF00133 tRNA synthetases class I (I, L, M and V) CP478_RS13380 PF10458 Valyl tRNA synthetase tRNA binding arm CP478_RS13380 PF08264 Anticodon-binding domain of tRNA CP478_RS13385 PF03435 Saccharopine dehydrogenase NADP binding domain CP478_RS13390 PF06737 Transglycosylase-like domain CP478_RS13405 PF12804 MobA-like NTP transferase domain CP478_RS13410 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CP478_RS13415 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CP478_RS13415 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CP478_RS13415 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CP478_RS13420 PF07690 Major Facilitator Superfamily CP478_RS13425 PF06689 ClpX C4-type zinc finger CP478_RS13425 PF10431 C-terminal, D2-small domain, of ClpB protein CP478_RS13425 PF07724 AAA domain (Cdc48 subfamily) CP478_RS13430 PF02574 Homocysteine S-methyltransferase CP478_RS13435 PF07690 Major Facilitator Superfamily CP478_RS13440 PF00574 Clp protease CP478_RS13445 PF00574 Clp protease CP478_RS13450 PF05698 Bacterial trigger factor protein (TF) C-terminus CP478_RS13450 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CP478_RS13450 PF05697 Bacterial trigger factor protein (TF) CP478_RS13465 PF00144 Beta-lactamase CP478_RS13470 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CP478_RS13470 PF06827 Zinc finger found in FPG and IleRS CP478_RS13470 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CP478_RS13475 PF02502 Ribose/Galactose Isomerase CP478_RS13480 PF01323 DSBA-like thioredoxin domain CP478_RS13485 PF01433 Peptidase family M1 domain CP478_RS13485 PF11838 ERAP1-like C-terminal domain CP478_RS13490 PF17174 Domain of unknown function (DUF5130) CP478_RS13505 PF01152 Bacterial-like globin CP478_RS13510 PF00128 Alpha amylase, catalytic domain CP478_RS13530 PF03061 Thioesterase superfamily CP478_RS13535 PF05088 Bacterial NAD-glutamate dehydrogenase CP478_RS13540 PF12848 ABC transporter CP478_RS13540 PF00005 ABC transporter CP478_RS13570 PF01553 Acyltransferase CP478_RS13580 PF06974 Protein of unknown function (DUF1298) CP478_RS13580 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain CP478_RS13585 PF07859 alpha/beta hydrolase fold CP478_RS13595 PF00378 Enoyl-CoA hydratase/isomerase CP478_RS13600 PF00934 PE family CP478_RS13605 PF00196 Bacterial regulatory proteins, luxR family CP478_RS13615 PF00934 PE family CP478_RS13640 PF01850 PIN domain CP478_RS13645 PF00364 Biotin-requiring enzyme CP478_RS13645 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CP478_RS13645 PF02817 e3 binding domain CP478_RS13650 PF02780 Transketolase, C-terminal domain CP478_RS13650 PF02779 Transketolase, pyrimidine binding domain CP478_RS13655 PF00676 Dehydrogenase E1 component CP478_RS13660 PF03328 HpcH/HpaI aldolase/citrate lyase family CP478_RS13665 PF01575 MaoC like domain CP478_RS13670 PF02770 Acyl-CoA dehydrogenase, middle domain CP478_RS13670 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CP478_RS13670 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CP478_RS13675 PF00289 Biotin carboxylase, N-terminal domain CP478_RS13675 PF00364 Biotin-requiring enzyme CP478_RS13675 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CP478_RS13675 PF02785 Biotin carboxylase C-terminal domain CP478_RS13680 PF01039 Carboxyl transferase domain CP478_RS13685 PF01144 Coenzyme A transferase CP478_RS13690 PF01144 Coenzyme A transferase CP478_RS13695 PF00501 AMP-binding enzyme CP478_RS13695 PF13193 AMP-binding enzyme C-terminal domain CP478_RS13715 PF00106 short chain dehydrogenase CP478_RS13720 PF05872 Bacterial protein of unknown function (DUF853) CP478_RS13725 PF00929 Exonuclease CP478_RS13740 PF00872 Transposase, Mutator family CP478_RS13790 PF03734 L,D-transpeptidase catalytic domain CP478_RS13790 PF17964 Bacterial Ig domain CP478_RS13800 PF00934 PE family CP478_RS13810 PF00578 AhpC/TSA family CP478_RS13815 PF07687 Peptidase dimerisation domain CP478_RS13815 PF01546 Peptidase family M20/M25/M40 CP478_RS13820 PF01648 4'-phosphopantetheinyl transferase superfamily CP478_RS13825 PF02801 Beta-ketoacyl synthase, C-terminal domain CP478_RS13825 PF00109 Beta-ketoacyl synthase, N-terminal domain CP478_RS13835 PF08924 Domain of unknown function (DUF1906) CP478_RS13845 PF09957 Bacterial antitoxin of type II TA system, VapB CP478_RS13850 PF01850 PIN domain CP478_RS13855 PF14338 Mrr N-terminal domain CP478_RS13855 PF04471 Restriction endonuclease CP478_RS13860 PF07669 Eco57I restriction-modification methylase CP478_RS13865 PF01850 PIN domain CP478_RS13875 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CP478_RS13875 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CP478_RS13875 PF01276 Orn/Lys/Arg decarboxylase, major domain CP478_RS13885 PF01029 NusB family CP478_RS13890 PF09285 Elongation factor P, C-terminal CP478_RS13890 PF08207 Elongation factor P (EF-P) KOW-like domain CP478_RS13890 PF01132 Elongation factor P (EF-P) OB domain CP478_RS13895 PF01321 Creatinase/Prolidase N-terminal domain CP478_RS13895 PF00557 Metallopeptidase family M24 CP478_RS13905 PF01220 Dehydroquinase class II CP478_RS13910 PF01761 3-dehydroquinate synthase CP478_RS13915 PF01202 Shikimate kinase CP478_RS13920 PF01264 Chorismate synthase CP478_RS13930 PF06259 Alpha/beta hydrolase CP478_RS13940 PF16708 Lipoprotein confined to pathogenic Mycobacterium CP478_RS13945 PF16708 Lipoprotein confined to pathogenic Mycobacterium CP478_RS13950 PF09957 Bacterial antitoxin of type II TA system, VapB CP478_RS13955 PF01850 PIN domain CP478_RS13960 PF01402 Ribbon-helix-helix protein, copG family CP478_RS13965 PF01850 PIN domain CP478_RS13975 PF01850 PIN domain CP478_RS13980 PF01402 Ribbon-helix-helix protein, copG family CP478_RS13995 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CP478_RS13995 PF08501 Shikimate dehydrogenase substrate binding domain CP478_RS14000 PF02618 YceG-like family CP478_RS14005 PF03652 Holliday junction resolvase CP478_RS14010 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CP478_RS14010 PF02272 DHHA1 domain CP478_RS14010 PF01411 tRNA synthetases class II (A) CP478_RS14015 PF01894 Uncharacterised protein family UPF0047 CP478_RS14030 PF16193 AAA C-terminal domain CP478_RS14030 PF12002 MgsA AAA+ ATPase C terminal CP478_RS14030 PF00004 ATPase family associated with various cellular activities (AAA) CP478_RS14050 PF10851 Protein of unknown function (DUF2652) CP478_RS14060 PF00027 Cyclic nucleotide-binding domain CP478_RS14060 PF00005 ABC transporter CP478_RS14065 PF00027 Cyclic nucleotide-binding domain CP478_RS14065 PF01734 Patatin-like phospholipase CP478_RS14075 PF04168 A predicted alpha-helical domain with a conserved ER motif. CP478_RS14075 PF14403 Circularly permuted ATP-grasp type 2 CP478_RS14080 PF15887 Putative zinc-binding metallo-peptidase CP478_RS14080 PF10005 zinc-ribbon domain CP478_RS14085 PF01841 Transglutaminase-like superfamily CP478_RS14085 PF08379 Bacterial transglutaminase-like N-terminal region CP478_RS14100 PF02938 GAD domain CP478_RS14100 PF00152 tRNA synthetases class II (D, K and N) CP478_RS14100 PF01336 OB-fold nucleic acid binding domain CP478_RS14105 PF08546 Ketopantoate reductase PanE/ApbA C terminal CP478_RS14105 PF02558 Ketopantoate reductase PanE/ApbA CP478_RS14110 PF10604 Polyketide cyclase / dehydrase and lipid transport CP478_RS14115 PF04228 Putative neutral zinc metallopeptidase CP478_RS14125 PF00149 Calcineurin-like phosphoesterase CP478_RS14125 PF16656 Purple acid Phosphatase, N-terminal domain CP478_RS14130 PF04055 Radical SAM superfamily CP478_RS14135 PF00561 alpha/beta hydrolase fold CP478_RS14140 PF13393 Histidyl-tRNA synthetase CP478_RS14140 PF03129 Anticodon binding domain CP478_RS14145 PF00753 Metallo-beta-lactamase superfamily CP478_RS14150 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CP478_RS14155 PF02824 TGS domain CP478_RS14155 PF13291 ACT domain CP478_RS14155 PF04607 Region found in RelA / SpoT proteins CP478_RS14160 PF00156 Phosphoribosyl transferase domain CP478_RS14165 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CP478_RS14170 PF02355 Protein export membrane protein CP478_RS14170 PF07549 SecD/SecF GG Motif CP478_RS14175 PF02355 Protein export membrane protein CP478_RS14175 PF07549 SecD/SecF GG Motif CP478_RS14180 PF02699 Preprotein translocase subunit CP478_RS14190 PF00202 Aminotransferase class-III CP478_RS14195 PF00501 AMP-binding enzyme CP478_RS14195 PF07993 Male sterility protein CP478_RS14195 PF00550 Phosphopantetheine attachment site CP478_RS14200 PF00934 PE family CP478_RS14205 PF05496 Holliday junction DNA helicase RuvB P-loop domain CP478_RS14205 PF05491 RuvB C-terminal winged helix domain CP478_RS14205 PF17864 RuvB AAA lid domain CP478_RS14210 PF07499 RuvA, C-terminal domain CP478_RS14210 PF01330 RuvA N terminal domain CP478_RS14215 PF02075 Crossover junction endodeoxyribonuclease RuvC CP478_RS14220 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CP478_RS14225 PF01850 PIN domain CP478_RS14230 PF13785 Domain of unknown function (DUF4178) CP478_RS14235 PF10936 Protein of unknown function DUF2617 CP478_RS14240 PF14042 Domain of unknown function (DUF4247) CP478_RS14245 PF03994 Domain of Unknown Function (DUF350) CP478_RS14260 PF01850 PIN domain CP478_RS14265 PF01709 Transcriptional regulator CP478_RS14270 PF01174 SNO glutamine amidotransferase family CP478_RS14280 PF01680 SOR/SNZ family CP478_RS14285 PF01243 Pyridoxamine 5'-phosphate oxidase CP478_RS14285 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CP478_RS14290 PF00823 PPE family CP478_RS14290 PF08237 PE-PPE domain CP478_RS14295 PF03099 Biotin/lipoate A/B protein ligase family CP478_RS14295 PF00293 NUDIX domain CP478_RS14300 PF13439 Glycosyltransferase Family 4 CP478_RS14305 PF03279 Bacterial lipid A biosynthesis acyltransferase CP478_RS14310 PF01066 CDP-alcohol phosphatidyltransferase CP478_RS14315 PF01230 HIT domain CP478_RS14320 PF03129 Anticodon binding domain CP478_RS14320 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CP478_RS14320 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CP478_RS14330 PF00934 PE family CP478_RS14330 PF01436 NHL repeat CP478_RS14335 PF09348 Domain of unknown function (DUF1990) CP478_RS14370 PF00582 Universal stress protein family CP478_RS14375 PF00582 Universal stress protein family CP478_RS14380 PF02163 Peptidase family M50 CP478_RS14380 PF00571 CBS domain CP478_RS14385 PF00571 CBS domain CP478_RS14400 PF18844 Bacterial archaeo-eukaryotic release factor family 2 CP478_RS14405 PF01951 Archease protein family (MTH1598/TM1083) CP478_RS14410 PF01139 tRNA-splicing ligase RtcB CP478_RS14415 PF08962 Domain of unknown function (DUF1876) CP478_RS14420 PF01814 Hemerythrin HHE cation binding domain CP478_RS14430 PF00934 PE family CP478_RS14445 PF09335 SNARE associated Golgi protein CP478_RS14450 PF01740 STAS domain CP478_RS14455 PF02694 Uncharacterised BCR, YnfA/UPF0060 family CP478_RS14465 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CP478_RS14475 PF01758 Sodium Bile acid symporter family CP478_RS14480 PF11455 Protein of unknown function (DUF3018) CP478_RS14485 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system CP478_RS14515 PF02899 Phage integrase, N-terminal SAM-like domain CP478_RS14515 PF00589 Phage integrase family CP478_RS14525 PF05423 Mycobacterium membrane protein CP478_RS14565 PF10888 Protein of unknown function (DUF2742) CP478_RS14580 PF14659 Phage integrase, N-terminal SAM-like domain CP478_RS14580 PF00589 Phage integrase family CP478_RS14625 PF02861 Clp amino terminal domain, pathogenicity island component CP478_RS14635 PF00583 Acetyltransferase (GNAT) family CP478_RS14655 PF09594 Glycosyltransferase family 87 CP478_RS14665 PF01641 SelR domain CP478_RS14670 PF13847 Methyltransferase domain CP478_RS14675 PF06778 Chlorite dismutase CP478_RS14680 PF01593 Flavin containing amine oxidoreductase CP478_RS14685 PF01208 Uroporphyrinogen decarboxylase (URO-D) CP478_RS14690 PF00378 Enoyl-CoA hydratase/isomerase CP478_RS14705 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CP478_RS14705 PF02779 Transketolase, pyrimidine binding domain CP478_RS14705 PF02780 Transketolase, C-terminal domain CP478_RS14720 PF03600 Citrate transporter CP478_RS14725 PF03600 Citrate transporter CP478_RS14740 PF00005 ABC transporter CP478_RS14745 PF01938 TRAM domain CP478_RS14745 PF05958 tRNA (Uracil-5-)-methyltransferase CP478_RS14755 PF13520 Amino acid permease CP478_RS14760 PF02080 TrkA-C domain CP478_RS14760 PF02254 TrkA-N domain CP478_RS14765 PF02080 TrkA-C domain CP478_RS14765 PF02254 TrkA-N domain CP478_RS14790 PF00692 dUTPase CP478_RS14810 PF00459 Inositol monophosphatase family CP478_RS14815 PF00480 ROK family CP478_RS14820 PF04542 Sigma-70 region 2 CP478_RS14820 PF00140 Sigma-70 factor, region 1.2 CP478_RS14820 PF04539 Sigma-70 region 3 CP478_RS14820 PF04545 Sigma-70, region 4 CP478_RS14855 PF04545 Sigma-70, region 4 CP478_RS14855 PF04542 Sigma-70 region 2 CP478_RS14855 PF00140 Sigma-70 factor, region 1.2 CP478_RS14855 PF04539 Sigma-70 region 3 CP478_RS14860 PF01325 Iron dependent repressor, N-terminal DNA binding domain CP478_RS14860 PF02742 Iron dependent repressor, metal binding and dimerisation domain CP478_RS14860 PF18357 Diphteria toxin repressor SH3 domain CP478_RS14870 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CP478_RS14870 PF07992 Pyridine nucleotide-disulphide oxidoreductase CP478_RS14880 PF12697 Alpha/beta hydrolase family CP478_RS14885 PF02567 Phenazine biosynthesis-like protein CP478_RS14890 PF08768 Domain of unknown function (DUF1794) CP478_RS14895 PF03477 ATP cone domain CP478_RS14900 PF01476 LysM domain CP478_RS14905 PF01726 LexA DNA binding domain CP478_RS14905 PF00717 Peptidase S24-like CP478_RS14920 PF03741 Integral membrane protein TerC family CP478_RS14925 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CP478_RS14925 PF02770 Acyl-CoA dehydrogenase, middle domain CP478_RS14925 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CP478_RS14930 PF13167 GTP-binding GTPase N-terminal CP478_RS14930 PF01926 50S ribosome-binding GTPase CP478_RS14930 PF16360 GTP-binding GTPase Middle Region CP478_RS14935 PF01678 Diaminopimelate epimerase CP478_RS14960 PF03993 Domain of Unknown Function (DUF349) CP478_RS14965 PF04055 Radical SAM superfamily CP478_RS14965 PF00919 Uncharacterized protein family UPF0004 CP478_RS14970 PF04055 Radical SAM superfamily CP478_RS14970 PF00919 Uncharacterized protein family UPF0004 CP478_RS14990 PF02631 RecX family CP478_RS14995 PF14528 LAGLIDADG-like domain CP478_RS14995 PF00154 recA bacterial DNA recombination protein CP478_RS15005 PF11248 Protein of unknown function (DUF3046) CP478_RS15015 PF07858 Limonene-1,2-epoxide hydrolase catalytic domain CP478_RS15025 PF00934 PE family CP478_RS15030 PF11248 Protein of unknown function (DUF3046) CP478_RS15040 PF04012 PspA/IM30 family CP478_RS15050 PF01066 CDP-alcohol phosphatidyltransferase CP478_RS15055 PF00583 Acetyltransferase (GNAT) family CP478_RS15060 PF17854 FtsK alpha domain CP478_RS15060 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CP478_RS15060 PF09397 Ftsk gamma domain CP478_RS15060 PF01580 FtsK/SpoIIIE family CP478_RS15075 PF04072 Leucine carboxyl methyltransferase CP478_RS15080 PF17770 Ribonuclease J C-terminal domain CP478_RS15080 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CP478_RS15080 PF12706 Beta-lactamase superfamily domain CP478_RS15085 PF00701 Dihydrodipicolinate synthetase family CP478_RS15090 PF02511 Thymidylate synthase complementing protein CP478_RS15100 PF02384 N-6 DNA Methylase CP478_RS15105 PF01850 PIN domain CP478_RS15110 PF09957 Bacterial antitoxin of type II TA system, VapB CP478_RS15115 PF01850 PIN domain CP478_RS15120 PF07704 Rv0623-like transcription factor CP478_RS15135 PF00186 Dihydrofolate reductase CP478_RS15140 PF00303 Thymidylate synthase CP478_RS15165 PF00823 PPE family CP478_RS15165 PF12484 Polymorphic PE/PPE proteins C terminal CP478_RS15170 PF00934 PE family CP478_RS15175 PF00823 PPE family CP478_RS15175 PF12484 Polymorphic PE/PPE proteins C terminal CP478_RS15190 PF05173 Dihydrodipicolinate reductase, C-terminus CP478_RS15190 PF01113 Dihydrodipicolinate reductase, N-terminus CP478_RS15205 PF00970 Oxidoreductase FAD-binding domain CP478_RS15205 PF00111 2Fe-2S iron-sulfur cluster binding domain CP478_RS15205 PF00175 Oxidoreductase NAD-binding domain CP478_RS15220 PF01037 Lrp/AsnC ligand binding domain CP478_RS15225 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CP478_RS15225 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CP478_RS15230 PF03060 Nitronate monooxygenase CP478_RS15235 PF05193 Peptidase M16 inactive domain CP478_RS15235 PF00675 Insulinase (Peptidase family M16) CP478_RS15240 PF00575 S1 RNA binding domain CP478_RS15240 PF00013 KH domain CP478_RS15240 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CP478_RS15240 PF01138 3' exoribonuclease family, domain 1 CP478_RS15250 PF00312 Ribosomal protein S15 CP478_RS15255 PF01687 Riboflavin kinase CP478_RS15255 PF06574 FAD synthetase CP478_RS15270 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CP478_RS15270 PF02770 Acyl-CoA dehydrogenase, middle domain CP478_RS15270 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CP478_RS15275 PF00108 Thiolase, N-terminal domain CP478_RS15275 PF02803 Thiolase, C-terminal domain CP478_RS15280 PF12323 Helix-turn-helix domain CP478_RS15280 PF07282 Putative transposase DNA-binding domain CP478_RS15280 PF01385 Probable transposase CP478_RS15285 PF00239 Resolvase, N terminal domain CP478_RS15290 PF09142 tRNA Pseudouridine synthase II, C terminal CP478_RS15290 PF16198 tRNA pseudouridylate synthase B C-terminal domain CP478_RS15290 PF01509 TruB family pseudouridylate synthase (N terminal domain) CP478_RS15295 PF17837 4'-phosphopantetheinyl transferase N-terminal domain CP478_RS15295 PF01648 4'-phosphopantetheinyl transferase superfamily CP478_RS15300 PF00149 Calcineurin-like phosphoesterase CP478_RS15330 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system CP478_RS15335 PF01402 Ribbon-helix-helix protein, copG family CP478_RS15405 PF09827 CRISPR associated protein Cas2 CP478_RS15410 PF01867 CRISPR associated protein Cas1 CP478_RS15415 PF09659 CRISPR-associated protein (Cas_Csm6) CP478_RS15420 PF03787 RAMP superfamily CP478_RS15425 PF17953 CRISPR Csm4 C-terminal domain CP478_RS15430 PF03787 RAMP superfamily CP478_RS15435 PF03750 Csm2 Type III-A CP478_RS15440 PF18211 Csm1 subunit domain B CP478_RS15445 PF10040 CRISPR-associated endoribonuclease Cas6 CP478_RS15475 PF01850 PIN domain CP478_RS15480 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system CP478_RS15485 PF00378 Enoyl-CoA hydratase/isomerase CP478_RS15490 PF00005 ABC transporter CP478_RS15490 PF17912 MalK OB fold domain CP478_RS15495 PF13416 Bacterial extracellular solute-binding protein CP478_RS15500 PF00528 Binding-protein-dependent transport system inner membrane component CP478_RS15505 PF00528 Binding-protein-dependent transport system inner membrane component CP478_RS15515 PF02272 DHHA1 domain CP478_RS15515 PF01368 DHH family CP478_RS15520 PF02033 Ribosome-binding factor A CP478_RS15525 PF04760 Translation initiation factor IF-2, N-terminal region CP478_RS15525 PF11987 Translation-initiation factor 2 CP478_RS15525 PF00009 Elongation factor Tu GTP binding domain CP478_RS15535 PF13184 NusA-like KH domain CP478_RS15535 PF08529 NusA N-terminal domain CP478_RS15540 PF02576 RimP N-terminal domain CP478_RS15540 PF17384 RimP C-terminal SH3 domain CP478_RS15555 PF04073 Aminoacyl-tRNA editing domain CP478_RS15555 PF03129 Anticodon binding domain CP478_RS15555 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CP478_RS15560 PF07690 Major Facilitator Superfamily CP478_RS15565 PF10414 Sirohaem synthase dimerisation region CP478_RS15565 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CP478_RS15570 PF07685 CobB/CobQ-like glutamine amidotransferase domain CP478_RS15570 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CP478_RS15575 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CP478_RS15575 PF12557 Cob(I)alamin adenosyltransferase N terminal CP478_RS15580 PF07728 AAA domain (dynein-related subfamily) CP478_RS15580 PF17863 AAA lid domain CP478_RS15580 PF13519 von Willebrand factor type A domain CP478_RS15585 PF13673 Acetyltransferase (GNAT) domain CP478_RS15590 PF06039 Malate:quinone oxidoreductase (Mqo) CP478_RS15595 PF00934 PE family CP478_RS15605 PF07992 Pyridine nucleotide-disulphide oxidoreductase CP478_RS15605 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CP478_RS15610 PF03824 High-affinity nickel-transport protein CP478_RS15625 PF00171 Aldehyde dehydrogenase family CP478_RS15630 PF07722 Peptidase C26 CP478_RS15635 PF00120 Glutamine synthetase, catalytic domain CP478_RS15640 PF00557 Metallopeptidase family M24 CP478_RS15655 PF01850 PIN domain CP478_RS15665 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system CP478_RS15670 PF05016 ParE toxin of type II toxin-antitoxin system, parDE CP478_RS15680 PF04551 GcpE protein CP478_RS15685 PF17820 PDZ domain CP478_RS15685 PF02163 Peptidase family M50 CP478_RS15690 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CP478_RS15690 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CP478_RS15690 PF13288 DXP reductoisomerase C-terminal domain CP478_RS15695 PF01402 Ribbon-helix-helix protein, copG family CP478_RS15700 PF01850 PIN domain CP478_RS15705 PF02469 Fasciclin domain CP478_RS15710 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system CP478_RS15715 PF17991 Thioredoxin like C-terminal domain CP478_RS15715 PF02683 Cytochrome C biogenesis protein transmembrane region CP478_RS15715 PF00578 AhpC/TSA family CP478_RS15720 PF02469 Fasciclin domain CP478_RS15725 PF10939 Protein of unknown function (DUF2631) CP478_RS15730 PF02683 Cytochrome C biogenesis protein transmembrane region CP478_RS15735 PF00578 AhpC/TSA family CP478_RS15740 PF04055 Radical SAM superfamily CP478_RS15750 PF01765 Ribosome recycling factor CP478_RS15760 PF00696 Amino acid kinase family CP478_RS15765 PF00486 Transcriptional regulatory protein, C terminal CP478_RS15770 PF07282 Putative transposase DNA-binding domain CP478_RS15770 PF12323 Helix-turn-helix domain CP478_RS15770 PF01385 Probable transposase CP478_RS15775 PF00239 Resolvase, N terminal domain CP478_RS15780 PF01047 MarR family CP478_RS15785 PF01425 Amidase CP478_RS15790 PF00889 Elongation factor TS CP478_RS15795 PF00318 Ribosomal protein S2 CP478_RS15800 PF01551 Peptidase family M23 CP478_RS15805 PF00823 PPE family CP478_RS15805 PF12484 Polymorphic PE/PPE proteins C terminal CP478_RS15815 PF00589 Phage integrase family CP478_RS15815 PF02899 Phage integrase, N-terminal SAM-like domain CP478_RS15820 PF04954 Siderophore-interacting protein CP478_RS15820 PF08021 Siderophore-interacting FAD-binding domain CP478_RS15825 PF02481 DNA recombination-mediator protein A CP478_RS15825 PF17782 DprA winged helix domain CP478_RS15830 PF01078 Magnesium chelatase, subunit ChlI CP478_RS15830 PF13335 Magnesium chelatase, subunit ChlI C-terminal CP478_RS15835 PF02021 Uncharacterised protein family UPF0102 CP478_RS15840 PF02634 FdhD/NarQ family CP478_RS15845 PF00384 Molybdopterin oxidoreductase CP478_RS15845 PF01568 Molydopterin dinucleotide binding domain CP478_RS15850 PF10611 Protein of unknown function (DUF2469) CP478_RS15855 PF01351 Ribonuclease HII CP478_RS15860 PF10502 Signal peptidase, peptidase S26 CP478_RS15865 PF01245 Ribosomal protein L19 CP478_RS15875 PF01746 tRNA (Guanine-1)-methyltransferase CP478_RS15880 PF05239 PRC-barrel domain CP478_RS15880 PF01782 RimM N-terminal domain CP478_RS15890 PF00886 Ribosomal protein S16 CP478_RS15895 PF13577 SnoaL-like domain CP478_RS15900 PF00768 D-alanyl-D-alanine carboxypeptidase CP478_RS15905 PF00440 Bacterial regulatory proteins, tetR family CP478_RS15910 PF07969 Amidohydrolase family CP478_RS15915 PF00069 Protein kinase domain CP478_RS15920 PF01979 Amidohydrolase family CP478_RS15925 PF02881 SRP54-type protein, helical bundle domain CP478_RS15925 PF02978 Signal peptide binding domain CP478_RS15925 PF00448 SRP54-type protein, GTPase domain CP478_RS15930 PF04851 Type III restriction enzyme, res subunit CP478_RS15935 PF01966 HD domain CP478_RS15935 PF08335 GlnD PII-uridylyltransferase CP478_RS15940 PF00543 Nitrogen regulatory protein P-II CP478_RS15945 PF00909 Ammonium Transporter Family CP478_RS15955 PF02881 SRP54-type protein, helical bundle domain CP478_RS15955 PF00448 SRP54-type protein, GTPase domain CP478_RS15960 PF02463 RecF/RecN/SMC N terminal domain CP478_RS15960 PF06470 SMC proteins Flexible Hinge Domain CP478_RS15965 PF00708 Acylphosphatase CP478_RS15970 PF02566 OsmC-like protein CP478_RS15975 PF06827 Zinc finger found in FPG and IleRS CP478_RS15975 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CP478_RS15975 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CP478_RS15985 PF00035 Double-stranded RNA binding motif CP478_RS15985 PF14622 Ribonuclease-III-like CP478_RS15990 PF02620 Large ribosomal RNA subunit accumulation protein YceD CP478_RS16000 PF00975 Thioesterase domain CP478_RS16010 PF00501 AMP-binding enzyme CP478_RS16015 PF14765 Polyketide synthase dehydratase CP478_RS16015 PF16197 Ketoacyl-synthetase C-terminal extension CP478_RS16015 PF00109 Beta-ketoacyl synthase, N-terminal domain CP478_RS16015 PF08659 KR domain CP478_RS16015 PF02801 Beta-ketoacyl synthase, C-terminal domain CP478_RS16015 PF00550 Phosphopantetheine attachment site CP478_RS16015 PF00698 Acyl transferase domain CP478_RS16020 PF08659 KR domain CP478_RS16020 PF02801 Beta-ketoacyl synthase, C-terminal domain CP478_RS16020 PF00109 Beta-ketoacyl synthase, N-terminal domain CP478_RS16020 PF16197 Ketoacyl-synthetase C-terminal extension CP478_RS16020 PF00698 Acyl transferase domain CP478_RS16020 PF00550 Phosphopantetheine attachment site CP478_RS16025 PF00698 Acyl transferase domain CP478_RS16025 PF08240 Alcohol dehydrogenase GroES-like domain CP478_RS16025 PF16197 Ketoacyl-synthetase C-terminal extension CP478_RS16025 PF00109 Beta-ketoacyl synthase, N-terminal domain CP478_RS16025 PF14765 Polyketide synthase dehydratase CP478_RS16025 PF02801 Beta-ketoacyl synthase, C-terminal domain CP478_RS16025 PF00550 Phosphopantetheine attachment site CP478_RS16025 PF08659 KR domain CP478_RS16030 PF08659 KR domain CP478_RS16030 PF00698 Acyl transferase domain CP478_RS16030 PF16197 Ketoacyl-synthetase C-terminal extension CP478_RS16030 PF00109 Beta-ketoacyl synthase, N-terminal domain CP478_RS16030 PF02801 Beta-ketoacyl synthase, C-terminal domain CP478_RS16030 PF00550 Phosphopantetheine attachment site CP478_RS16030 PF14765 Polyketide synthase dehydratase CP478_RS16035 PF00668 Condensation domain CP478_RS16035 PF16197 Ketoacyl-synthetase C-terminal extension CP478_RS16035 PF00550 Phosphopantetheine attachment site CP478_RS16035 PF00109 Beta-ketoacyl synthase, N-terminal domain CP478_RS16035 PF00698 Acyl transferase domain CP478_RS16035 PF02801 Beta-ketoacyl synthase, C-terminal domain CP478_RS16040 PF00005 ABC transporter CP478_RS16055 PF16911 Phthiocerol/phthiodiolone dimycocerosyl transferase C-terminus CP478_RS16060 PF16197 Ketoacyl-synthetase C-terminal extension CP478_RS16060 PF08240 Alcohol dehydrogenase GroES-like domain CP478_RS16060 PF00107 Zinc-binding dehydrogenase CP478_RS16060 PF00109 Beta-ketoacyl synthase, N-terminal domain CP478_RS16060 PF02801 Beta-ketoacyl synthase, C-terminal domain CP478_RS16060 PF08659 KR domain CP478_RS16060 PF00550 Phosphopantetheine attachment site CP478_RS16060 PF14765 Polyketide synthase dehydratase CP478_RS16060 PF00698 Acyl transferase domain CP478_RS16065 PF00501 AMP-binding enzyme CP478_RS16070 PF03176 MMPL family CP478_RS16090 PF07161 LppX_LprAFG lipoprotein CP478_RS16095 PF00698 Acyl transferase domain CP478_RS16095 PF00550 Phosphopantetheine attachment site CP478_RS16095 PF08659 KR domain CP478_RS16095 PF14765 Polyketide synthase dehydratase CP478_RS16095 PF08240 Alcohol dehydrogenase GroES-like domain CP478_RS16100 PF02801 Beta-ketoacyl synthase, C-terminal domain CP478_RS16100 PF00109 Beta-ketoacyl synthase, N-terminal domain CP478_RS16100 PF16197 Ketoacyl-synthetase C-terminal extension CP478_RS16105 PF00550 Phosphopantetheine attachment site CP478_RS16105 PF13193 AMP-binding enzyme C-terminal domain CP478_RS16105 PF00501 AMP-binding enzyme CP478_RS16110 PF01947 p-hydroxybenzoic acid synthase CP478_RS16115 PF00501 AMP-binding enzyme CP478_RS16125 PF00296 Luciferase-like monooxygenase CP478_RS16130 PF08241 Methyltransferase domain CP478_RS16135 PF03435 Saccharopine dehydrogenase NADP binding domain CP478_RS16155 PF00535 Glycosyl transferase family 2 CP478_RS16165 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase CP478_RS16170 PF04989 Cephalosporin hydroxylase CP478_RS16190 PF03773 Predicted permease CP478_RS16195 PF00551 Formyl transferase CP478_RS16195 PF01842 ACT domain CP478_RS16210 PF01467 Cytidylyltransferase-like CP478_RS16220 PF02785 Biotin carboxylase C-terminal domain CP478_RS16220 PF00289 Biotin carboxylase, N-terminal domain CP478_RS16220 PF00364 Biotin-requiring enzyme CP478_RS16220 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CP478_RS16220 PF00682 HMGL-like CP478_RS16220 PF02436 Conserved carboxylase domain CP478_RS16235 PF07859 alpha/beta hydrolase fold CP478_RS16240 PF00248 Aldo/keto reductase family CP478_RS16245 PF00248 Aldo/keto reductase family CP478_RS16255 PF00270 DEAD/DEAH box helicase CP478_RS16255 PF17191 RecG wedge domain CP478_RS16255 PF00271 Helicase conserved C-terminal domain CP478_RS16260 PF13684 Dihydroxyacetone kinase family CP478_RS16260 PF02734 DAK2 domain CP478_RS16270 PF00830 Ribosomal L28 family CP478_RS16275 PF03167 Uracil DNA glycosylase superfamily CP478_RS16280 PF00586 AIR synthase related protein, N-terminal domain CP478_RS16280 PF02769 AIR synthase related protein, C-terminal domain CP478_RS16285 PF01385 Probable transposase CP478_RS16285 PF07282 Putative transposase DNA-binding domain CP478_RS16285 PF12323 Helix-turn-helix domain CP478_RS16290 PF00239 Resolvase, N terminal domain CP478_RS16300 PF07478 D-ala D-ala ligase C-terminus CP478_RS16300 PF01820 D-ala D-ala ligase N-terminus CP478_RS16305 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CP478_RS16305 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CP478_RS16310 PF01983 Guanylyl transferase CofC like CP478_RS16315 PF17941 Polyphosphate kinase C-terminal domain 1 CP478_RS16315 PF13089 Polyphosphate kinase N-terminal domain CP478_RS16315 PF02503 Polyphosphate kinase middle domain CP478_RS16315 PF13090 Polyphosphate kinase C-terminal domain 2 CP478_RS16320 PF00300 Histidine phosphatase superfamily (branch 1) CP478_RS16320 PF00293 NUDIX domain CP478_RS16325 PF00216 Bacterial DNA-binding protein CP478_RS16330 PF00694 Aconitase C-terminal domain CP478_RS16335 PF00330 Aconitase family (aconitate hydratase) CP478_RS16365 PF00749 tRNA synthetases class I (E and Q), catalytic domain CP478_RS16370 PF01557 Fumarylacetoacetate (FAA) hydrolase family CP478_RS16380 PF00180 Isocitrate/isopropylmalate dehydrogenase CP478_RS16385 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CP478_RS16385 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CP478_RS16385 PF01842 ACT domain CP478_RS16405 PF00672 HAMP domain CP478_RS16415 PF03649 Uncharacterised protein family (UPF0014) CP478_RS16420 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CP478_RS16420 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CP478_RS16425 PF10369 Small subunit of acetolactate synthase CP478_RS16425 PF01842 ACT domain CP478_RS16430 PF00205 Thiamine pyrophosphate enzyme, central domain CP478_RS16430 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CP478_RS16430 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CP478_RS16435 PF10756 Bacterial PH domain CP478_RS16440 PF07681 DoxX CP478_RS16460 PF02934 GatB/GatE catalytic domain CP478_RS16460 PF02637 GatB domain CP478_RS16465 PF00365 Phosphofructokinase CP478_RS16470 PF01425 Amidase CP478_RS16475 PF02686 Glu-tRNAGln amidotransferase C subunit CP478_RS16485 PF00533 BRCA1 C Terminus (BRCT) domain CP478_RS16485 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CP478_RS16485 PF01653 NAD-dependent DNA ligase adenylation domain CP478_RS16485 PF12826 Helix-hairpin-helix motif CP478_RS16485 PF03120 NAD-dependent DNA ligase OB-fold domain CP478_RS16505 PF00823 PPE family CP478_RS16510 PF00934 PE family CP478_RS16515 PF06013 Proteins of 100 residues with WXG CP478_RS16520 PF06013 Proteins of 100 residues with WXG CP478_RS16525 PF00823 PPE family CP478_RS16530 PF00934 PE family CP478_RS16535 PF00872 Transposase, Mutator family CP478_RS16550 PF00266 Aminotransferase class-V CP478_RS16565 PF00766 Electron transfer flavoprotein FAD-binding domain CP478_RS16565 PF01012 Electron transfer flavoprotein domain CP478_RS16570 PF01012 Electron transfer flavoprotein domain CP478_RS16575 PF08241 Methyltransferase domain CP478_RS16580 PF03065 Glycosyl hydrolase family 57 CP478_RS16580 PF09210 Domain of unknown function (DUF1957) CP478_RS16585 PF00534 Glycosyl transferases group 1 CP478_RS16585 PF13439 Glycosyltransferase Family 4 CP478_RS16600 PF00132 Bacterial transferase hexapeptide (six repeats) CP478_RS16605 PF13360 PQQ-like domain CP478_RS16610 PF11738 Protein of unknown function (DUF3298) CP478_RS16615 PF18096 THUMP domain-like CP478_RS16620 PF08241 Methyltransferase domain CP478_RS16625 PF00378 Enoyl-CoA hydratase/isomerase CP478_RS16635 PF00005 ABC transporter CP478_RS16645 PF00115 Cytochrome C and Quinol oxidase polypeptide I CP478_RS16660 PF08240 Alcohol dehydrogenase GroES-like domain CP478_RS16660 PF00107 Zinc-binding dehydrogenase CP478_RS16675 PF00268 Ribonucleotide reductase, small chain CP478_RS16680 PF00743 Flavin-binding monooxygenase-like CP478_RS16685 PF00440 Bacterial regulatory proteins, tetR family CP478_RS16690 PF00317 Ribonucleotide reductase, all-alpha domain CP478_RS16690 PF02867 Ribonucleotide reductase, barrel domain CP478_RS16690 PF08343 Ribonucleotide reductase N-terminal CP478_RS16695 PF07972 NrdI Flavodoxin like CP478_RS16710 PF03358 NADPH-dependent FMN reductase CP478_RS16720 PF00817 impB/mucB/samB family CP478_RS16720 PF11799 impB/mucB/samB family C-terminal domain CP478_RS16725 PF00106 short chain dehydrogenase CP478_RS16735 PF00067 Cytochrome P450 CP478_RS16745 PF07729 FCD domain CP478_RS16745 PF00392 Bacterial regulatory proteins, gntR family CP478_RS16750 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CP478_RS16750 PF02770 Acyl-CoA dehydrogenase, middle domain CP478_RS16750 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CP478_RS16755 PF01068 ATP dependent DNA ligase domain CP478_RS16755 PF04679 ATP dependent DNA ligase C terminal region CP478_RS16755 PF04675 DNA ligase N terminus CP478_RS16760 PF13722 5TM C-terminal transporter carbon starvation CstA CP478_RS16760 PF02554 Carbon starvation protein CstA CP478_RS16770 PF00893 Small Multidrug Resistance protein CP478_RS16780 PF05305 Protein of unknown function (DUF732) CP478_RS16790 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CP478_RS16790 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CP478_RS16790 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CP478_RS16790 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CP478_RS16795 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CP478_RS16800 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CP478_RS16815 PF04343 Protein of unknown function, DUF488 CP478_RS16845 PF00296 Luciferase-like monooxygenase CP478_RS16860 PF12833 Helix-turn-helix domain CP478_RS16860 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term CP478_RS16865 PF00743 Flavin-binding monooxygenase-like CP478_RS16870 PF07859 alpha/beta hydrolase fold CP478_RS16875 PF00106 short chain dehydrogenase CP478_RS16880 PF08240 Alcohol dehydrogenase GroES-like domain CP478_RS16880 PF00107 Zinc-binding dehydrogenase CP478_RS16885 PF06974 Protein of unknown function (DUF1298) CP478_RS16885 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain CP478_RS16890 PF06974 Protein of unknown function (DUF1298) CP478_RS16890 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain CP478_RS16895 PF13193 AMP-binding enzyme C-terminal domain CP478_RS16895 PF00501 AMP-binding enzyme CP478_RS16920 PF05661 Protein of unknown function (DUF808) CP478_RS16930 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CP478_RS16935 PF01638 HxlR-like helix-turn-helix CP478_RS16945 PF07859 alpha/beta hydrolase fold CP478_RS16945 PF00934 PE family CP478_RS16955 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system CP478_RS16970 PF01668 SmpB protein CP478_RS16975 PF02687 FtsX-like permease family CP478_RS16975 PF18075 FtsX extracellular domain CP478_RS16980 PF00005 ABC transporter CP478_RS16990 PF00924 Mechanosensitive ion channel CP478_RS16995 PF03462 PCRF domain CP478_RS16995 PF00472 RF-1 domain CP478_RS17000 PF07992 Pyridine nucleotide-disulphide oxidoreductase CP478_RS17005 PF01565 FAD binding domain CP478_RS17005 PF02913 FAD linked oxidases, C-terminal domain CP478_RS17015 PF04055 Radical SAM superfamily CP478_RS17015 PF06463 Molybdenum Cofactor Synthesis C CP478_RS17020 PF01329 Pterin 4 alpha carbinolamine dehydratase CP478_RS17025 PF01967 MoaC family CP478_RS17030 PF02597 ThiS family CP478_RS17050 PF00872 Transposase, Mutator family CP478_RS17055 PF00899 ThiF family CP478_RS17055 PF00581 Rhodanese-like domain CP478_RS17060 PF00581 Rhodanese-like domain CP478_RS17065 PF07210 Protein of unknown function (DUF1416) CP478_RS17070 PF02391 MoaE protein CP478_RS17080 PF00067 Cytochrome P450 CP478_RS17100 PF03704 Bacterial transcriptional activator domain CP478_RS17100 PF00486 Transcriptional regulatory protein, C terminal CP478_RS17105 PF12484 Polymorphic PE/PPE proteins C terminal CP478_RS17105 PF00823 PPE family CP478_RS17130 PF12900 Pyridoxamine 5'-phosphate oxidase CP478_RS17135 PF06974 Protein of unknown function (DUF1298) CP478_RS17135 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain CP478_RS17145 PF13185 GAF domain CP478_RS17145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CP478_RS17145 PF07730 Histidine kinase CP478_RS17150 PF00196 Bacterial regulatory proteins, luxR family CP478_RS17150 PF00072 Response regulator receiver domain CP478_RS17155 PF00582 Universal stress protein family CP478_RS17170 PF00823 PPE family CP478_RS17175 PF12484 Polymorphic PE/PPE proteins C terminal CP478_RS17175 PF00823 PPE family CP478_RS17185 PF00459 Inositol monophosphatase family CP478_RS17200 PF02770 Acyl-CoA dehydrogenase, middle domain CP478_RS17200 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CP478_RS17200 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CP478_RS17205 PF00698 Acyl transferase domain CP478_RS17205 PF08240 Alcohol dehydrogenase GroES-like domain CP478_RS17205 PF08659 KR domain CP478_RS17205 PF00550 Phosphopantetheine attachment site CP478_RS17205 PF14765 Polyketide synthase dehydratase CP478_RS17220 PF01469 Pentapeptide repeats (8 copies) CP478_RS17220 PF00823 PPE family CP478_RS17225 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CP478_RS17230 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CP478_RS17235 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CP478_RS17240 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CP478_RS17250 PF10531 SLBB domain CP478_RS17250 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CP478_RS17250 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CP478_RS17255 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CP478_RS17255 PF01568 Molydopterin dinucleotide binding domain CP478_RS17255 PF00384 Molybdopterin oxidoreductase CP478_RS17260 PF00146 NADH dehydrogenase CP478_RS17265 PF12838 4Fe-4S dicluster domain CP478_RS17270 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CP478_RS17275 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CP478_RS17280 PF00361 Proton-conducting membrane transporter CP478_RS17280 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CP478_RS17285 PF00361 Proton-conducting membrane transporter CP478_RS17290 PF00361 Proton-conducting membrane transporter CP478_RS17295 PF00823 PPE family CP478_RS17295 PF01469 Pentapeptide repeats (8 copies) CP478_RS17305 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CP478_RS17305 PF00355 Rieske [2Fe-2S] domain CP478_RS17315 PF01882 Protein of unknown function DUF58 CP478_RS17320 PF07726 ATPase family associated with various cellular activities (AAA) CP478_RS17320 PF17863 AAA lid domain CP478_RS17340 PF01636 Phosphotransferase enzyme family CP478_RS17350 PF01593 Flavin containing amine oxidoreductase CP478_RS17365 PF00440 Bacterial regulatory proteins, tetR family CP478_RS17365 PF16859 Tetracyclin repressor-like, C-terminal domain CP478_RS17375 PF01425 Amidase CP478_RS17385 PF12697 Alpha/beta hydrolase family CP478_RS17390 PF04075 F420H(2)-dependent quinone reductase CP478_RS17405 PF13635 Domain of unknown function (DUF4143) CP478_RS17405 PF13173 AAA domain CP478_RS17410 PF01850 PIN domain CP478_RS17415 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system CP478_RS17420 PF05973 Phage derived protein Gp49-like (DUF891) CP478_RS17425 PF13744 Helix-turn-helix domain CP478_RS17440 PF09722 Protein of unknown function (DUF2384) CP478_RS17445 PF08808 RES domain CP478_RS17465 PF13936 Helix-turn-helix domain CP478_RS17465 PF00665 Integrase core domain CP478_RS17490 PF03699 Uncharacterised protein family (UPF0182) CP478_RS17515 PF03109 ABC1 family CP478_RS17520 PF02467 Transcription factor WhiB CP478_RS17520 PF02178 AT hook motif CP478_RS17525 PF00580 UvrD/REP helicase N-terminal domain CP478_RS17525 PF00570 HRDC domain CP478_RS17525 PF13361 UvrD-like helicase C-terminal domain CP478_RS17530 PF00462 Glutaredoxin CP478_RS17535 PF00293 NUDIX domain CP478_RS17535 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain CP478_RS17535 PF09297 NADH pyrophosphatase zinc ribbon domain CP478_RS17545 PF00580 UvrD/REP helicase N-terminal domain CP478_RS17545 PF13361 UvrD-like helicase C-terminal domain CP478_RS17560 PF12697 Alpha/beta hydrolase family CP478_RS17565 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CP478_RS17575 PF00899 ThiF family CP478_RS17575 PF00581 Rhodanese-like domain CP478_RS17605 PF00270 DEAD/DEAH box helicase CP478_RS17605 PF00271 Helicase conserved C-terminal domain CP478_RS17615 PF13614 AAA domain CP478_RS17620 PF00300 Histidine phosphatase superfamily (branch 1) CP478_RS17625 PF00425 chorismate binding enzyme CP478_RS17640 PF00781 Diacylglycerol kinase catalytic domain CP478_RS17645 PF02467 Transcription factor WhiB CP478_RS17650 PF07568 Histidine kinase CP478_RS17650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CP478_RS17650 PF12282 Signal transduction histidine kinase CP478_RS17655 PF00364 Biotin-requiring enzyme CP478_RS17665 PF13490 Putative zinc-finger CP478_RS17675 PF08281 Sigma-70, region 4 CP478_RS17675 PF04542 Sigma-70 region 2 CP478_RS17690 PF04073 Aminoacyl-tRNA editing domain CP478_RS17700 PF02586 SOS response associated peptidase (SRAP) CP478_RS17705 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CP478_RS17710 PF03193 RsgA GTPase CP478_RS17715 PF00487 Fatty acid desaturase CP478_RS17720 PF00175 Oxidoreductase NAD-binding domain CP478_RS17720 PF00111 2Fe-2S iron-sulfur cluster binding domain CP478_RS17720 PF00970 Oxidoreductase FAD-binding domain CP478_RS17730 PF03976 Polyphosphate kinase 2 (PPK2) CP478_RS17735 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain CP478_RS17735 PF06974 Protein of unknown function (DUF1298) CP478_RS17740 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain CP478_RS17750 PF02254 TrkA-N domain CP478_RS17750 PF00999 Sodium/hydrogen exchanger family CP478_RS17760 PF07298 NnrU protein CP478_RS17765 PF01734 Patatin-like phospholipase CP478_RS17765 PF00027 Cyclic nucleotide-binding domain CP478_RS17770 PF07517 SecA DEAD-like domain CP478_RS17770 PF01043 SecA preprotein cross-linking domain CP478_RS17770 PF07516 SecA Wing and Scaffold domain CP478_RS17775 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CP478_RS17775 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus CP478_RS17790 PF10647 Lipoprotein LpqB beta-propeller domain CP478_RS17790 PF10646 Sporulation and spore germination CP478_RS17795 PF00672 HAMP domain CP478_RS17795 PF00512 His Kinase A (phospho-acceptor) domain CP478_RS17795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CP478_RS17800 PF00486 Transcriptional regulatory protein, C terminal CP478_RS17800 PF00072 Response regulator receiver domain CP478_RS17805 PF02223 Thymidylate kinase CP478_RS17810 PF05221 S-adenosyl-L-homocysteine hydrolase CP478_RS17810 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CP478_RS17820 PF00301 Rubredoxin CP478_RS17825 PF00301 Rubredoxin CP478_RS17830 PF00487 Fatty acid desaturase CP478_RS17835 PF13520 Amino acid permease CP478_RS17845 PF01238 Phosphomannose isomerase type I CP478_RS17855 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CP478_RS17855 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CP478_RS17855 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CP478_RS17855 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CP478_RS17870 PF02467 Transcription factor WhiB CP478_RS17880 PF01933 Uncharacterised protein family UPF0052 CP478_RS17885 PF00881 Nitroreductase family CP478_RS17885 PF01996 F420-0:Gamma-glutamyl ligase CP478_RS17895 PF02384 N-6 DNA Methylase CP478_RS17900 PF00483 Nucleotidyl transferase CP478_RS17910 PF04321 RmlD substrate binding domain CP478_RS17915 PF13399 LytR cell envelope-related transcriptional attenuator CP478_RS17915 PF03816 Cell envelope-related transcriptional attenuator domain CP478_RS17925 PF07371 Protein of unknown function (DUF1490) CP478_RS17940 PF02515 CoA-transferase family III CP478_RS17945 PF01740 STAS domain CP478_RS17945 PF00916 Sulfate permease family CP478_RS17950 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CP478_RS17950 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CP478_RS17950 PF02770 Acyl-CoA dehydrogenase, middle domain CP478_RS17955 PF00731 AIR carboxylase CP478_RS17960 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CP478_RS17960 PF02222 ATP-grasp domain CP478_RS17975 PF08279 HTH domain CP478_RS17975 PF02237 Biotin protein ligase C terminal domain CP478_RS17975 PF03099 Biotin/lipoate A/B protein ligase family CP478_RS17980 PF01039 Carboxyl transferase domain CP478_RS17990 PF02545 Maf-like protein CP478_RS17995 PF00581 Rhodanese-like domain CP478_RS18000 PF02657 Fe-S metabolism associated domain CP478_RS18005 PF02785 Biotin carboxylase C-terminal domain CP478_RS18005 PF00289 Biotin carboxylase, N-terminal domain CP478_RS18005 PF00364 Biotin-requiring enzyme CP478_RS18005 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CP478_RS18010 PF04539 Sigma-70 region 3 CP478_RS18010 PF04542 Sigma-70 region 2 CP478_RS18010 PF04545 Sigma-70, region 4 CP478_RS18030 PF00202 Aminotransferase class-III CP478_RS18035 PF01037 Lrp/AsnC ligand binding domain CP478_RS18040 PF07063 Domain of unknown function (DUF1338) CP478_RS18045 PF00171 Aldehyde dehydrogenase family CP478_RS18055 PF00440 Bacterial regulatory proteins, tetR family CP478_RS18060 PF08494 DEAD/H associated CP478_RS18060 PF00271 Helicase conserved C-terminal domain CP478_RS18060 PF00270 DEAD/DEAH box helicase CP478_RS18065 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CP478_RS18065 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CP478_RS18075 PF16347 Domain of unknown function (DUF4976) CP478_RS18075 PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain CP478_RS18075 PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain CP478_RS18075 PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain CP478_RS18075 PF00884 Sulfatase CP478_RS18080 PF00849 RNA pseudouridylate synthase CP478_RS18085 PF01895 PhoU domain CP478_RS18090 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CP478_RS18090 PF01266 FAD dependent oxidoreductase CP478_RS18095 PF07992 Pyridine nucleotide-disulphide oxidoreductase CP478_RS18095 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CP478_RS18105 PF01546 Peptidase family M20/M25/M40 CP478_RS18105 PF04107 Glutamate-cysteine ligase family 2(GCS2) CP478_RS18115 PF01048 Phosphorylase superfamily CP478_RS18120 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CP478_RS18120 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CP478_RS18120 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CP478_RS18120 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CP478_RS18130 PF04185 Phosphoesterase family CP478_RS18140 PF00561 alpha/beta hydrolase fold CP478_RS18155 PF00962 Adenosine/AMP deaminase CP478_RS18160 PF02885 Glycosyl transferase family, helical bundle domain CP478_RS18160 PF00591 Glycosyl transferase family, a/b domain CP478_RS18160 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CP478_RS18165 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CP478_RS18170 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CP478_RS18180 PF00890 FAD binding domain CP478_RS18180 PF02910 Fumarate reductase flavoprotein C-term CP478_RS18185 PF13085 2Fe-2S iron-sulfur cluster binding domain CP478_RS18190 PF01850 PIN domain CP478_RS18205 PF02391 MoaE protein CP478_RS18210 PF01967 MoaC family CP478_RS18225 PF01548 Transposase CP478_RS18225 PF02371 Transposase IS116/IS110/IS902 family CP478_RS18230 PF08281 Sigma-70, region 4 CP478_RS18230 PF04542 Sigma-70 region 2 CP478_RS18230 PF12680 SnoaL-like domain CP478_RS18235 PF00202 Aminotransferase class-III CP478_RS18240 PF00768 D-alanyl-D-alanine carboxypeptidase CP478_RS18245 PF00083 Sugar (and other) transporter CP478_RS18250 PF01979 Amidohydrolase family CP478_RS18265 PF13411 MerR HTH family regulatory protein CP478_RS18270 PF03631 Virulence factor BrkB CP478_RS18275 PF00579 tRNA synthetases class I (W and Y) CP478_RS18285 PF00180 Isocitrate/isopropylmalate dehydrogenase CP478_RS18290 PF01053 Cys/Met metabolism PLP-dependent enzyme CP478_RS18295 PF00561 alpha/beta hydrolase fold CP478_RS18300 PF08241 Methyltransferase domain CP478_RS18305 PF00823 PPE family CP478_RS18305 PF01469 Pentapeptide repeats (8 copies) CP478_RS18320 PF00823 PPE family CP478_RS18320 PF00823 PPE family CP478_RS18320 PF01469 Pentapeptide repeats (8 copies) CP478_RS18320 PF01469 Pentapeptide repeats (8 copies) CP478_RS18350 PF00823 PPE family CP478_RS18350 PF00823 PPE family CP478_RS18350 PF01469 Pentapeptide repeats (8 copies) CP478_RS18350 PF00823 PPE family CP478_RS18350 PF01469 Pentapeptide repeats (8 copies) CP478_RS18350 PF01469 Pentapeptide repeats (8 copies) CP478_RS18360 PF08031 Berberine and berberine like CP478_RS18360 PF01565 FAD binding domain CP478_RS18375 PF05305 Protein of unknown function (DUF732) CP478_RS18385 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CP478_RS18385 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CP478_RS18390 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system CP478_RS18395 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system CP478_RS18400 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CP478_RS18405 PF01061 ABC-2 type transporter CP478_RS18405 PF00498 FHA domain CP478_RS18405 PF00005 ABC transporter CP478_RS18410 PF13599 Pentapeptide repeats (9 copies) CP478_RS18425 PF03259 Roadblock/LC7 domain CP478_RS18435 PF00588 SpoU rRNA Methylase family CP478_RS18440 PF00934 PE family CP478_RS18455 PF02811 PHP domain CP478_RS18455 PF14579 Helix-hairpin-helix motif CP478_RS18455 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CP478_RS18455 PF07733 Bacterial DNA polymerase III alpha NTPase domain CP478_RS18460 PF06974 Protein of unknown function (DUF1298) CP478_RS18460 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain CP478_RS18465 PF02358 Trehalose-phosphatase CP478_RS18475 PF00378 Enoyl-CoA hydratase/isomerase CP478_RS18485 PF01425 Amidase CP478_RS18495 PF13243 Squalene-hopene cyclase C-terminal domain CP478_RS18495 PF00432 Prenyltransferase and squalene oxidase repeat CP478_RS18505 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CP478_RS18505 PF02779 Transketolase, pyrimidine binding domain CP478_RS18505 PF02780 Transketolase, C-terminal domain CP478_RS18510 PF02780 Transketolase, C-terminal domain CP478_RS18510 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CP478_RS18510 PF02779 Transketolase, pyrimidine binding domain CP478_RS18520 PF02401 LytB protein CP478_RS18525 PF00348 Polyprenyl synthetase CP478_RS18530 PF01850 PIN domain CP478_RS18535 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system CP478_RS18545 PF00934 PE family CP478_RS18550 PF01575 MaoC like domain CP478_RS18555 PF00934 PE family CP478_RS18555 PF00300 Histidine phosphatase superfamily (branch 1) CP478_RS18560 PF00106 short chain dehydrogenase CP478_RS18570 PF01156 Inosine-uridine preferring nucleoside hydrolase CP478_RS18590 PF00117 Glutamine amidotransferase class-I CP478_RS18590 PF00958 GMP synthase C terminal domain CP478_RS18590 PF02540 NAD synthase CP478_RS18600 PF00348 Polyprenyl synthetase CP478_RS18605 PF04072 Leucine carboxyl methyltransferase CP478_RS18610 PF13419 Haloacid dehalogenase-like hydrolase CP478_RS18615 PF03633 Glycosyl hydrolase family 65, C-terminal domain CP478_RS18615 PF03632 Glycosyl hydrolase family 65 central catalytic domain CP478_RS18615 PF03636 Glycosyl hydrolase family 65, N-terminal domain CP478_RS18625 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CP478_RS18630 PF13454 FAD-NAD(P)-binding CP478_RS18635 PF00551 Formyl transferase CP478_RS18635 PF18216 N-formyltransferase dimerization C-terminal domain CP478_RS18640 PF00440 Bacterial regulatory proteins, tetR family CP478_RS18645 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CP478_RS18650 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system CP478_RS18655 PF01850 PIN domain CP478_RS18660 PF05199 GMC oxidoreductase CP478_RS18665 PF00478 IMP dehydrogenase / GMP reductase domain CP478_RS18670 PF00478 IMP dehydrogenase / GMP reductase domain CP478_RS18670 PF00571 CBS domain CP478_RS18675 PF17252 Family of unknown function (DUF5319) CP478_RS18680 PF16751 Anti-sigma-D factor RsdA to sigma factor binding region CP478_RS18685 PF04542 Sigma-70 region 2 CP478_RS18685 PF08281 Sigma-70, region 4 CP478_RS18695 PF02467 Transcription factor WhiB CP478_RS18700 PF00118 TCP-1/cpn60 chaperonin family CP478_RS18705 PF00166 Chaperonin 10 Kd subunit CP478_RS18710 PF00814 Glycoprotease family CP478_RS18715 PF00583 Acetyltransferase (GNAT) family CP478_RS18720 PF00814 Glycoprotease family CP478_RS18725 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CP478_RS18730 PF00842 Alanine racemase, C-terminal domain CP478_RS18730 PF01168 Alanine racemase, N-terminal domain CP478_RS18745 PF00823 PPE family CP478_RS18750 PF00823 PPE family CP478_RS18755 PF01695 IstB-like ATP binding protein CP478_RS18760 PF00665 Integrase core domain CP478_RS18775 PF00823 PPE family CP478_RS18790 PF00282 Pyridoxal-dependent decarboxylase conserved domain CP478_RS18795 PF03853 YjeF-related protein N-terminus CP478_RS18795 PF01256 Carbohydrate kinase CP478_RS18810 PF01380 SIS domain CP478_RS18835 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CP478_RS18835 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CP478_RS18835 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CP478_RS18835 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CP478_RS18840 PF00380 Ribosomal protein S9/S16 CP478_RS18845 PF00572 Ribosomal protein L13 CP478_RS18850 PF06013 Proteins of 100 residues with WXG CP478_RS18855 PF06013 Proteins of 100 residues with WXG CP478_RS18865 PF01580 FtsK/SpoIIIE family CP478_RS18870 PF08817 WXG100 protein secretion system (Wss), protein YukD CP478_RS18875 PF00082 Subtilase family CP478_RS18880 PF05108 Type VII secretion system ESX-1, transport TM domain B CP478_RS18885 PF01083 Cutinase CP478_RS18890 PF01083 Cutinase CP478_RS18910 PF01416 tRNA pseudouridine synthase CP478_RS18915 PF01196 Ribosomal protein L17 CP478_RS18920 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CP478_RS18920 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CP478_RS18920 PF01000 RNA polymerase Rpb3/RpoA insert domain CP478_RS18925 PF00163 Ribosomal protein S4/S9 N-terminal domain CP478_RS18925 PF01479 S4 domain CP478_RS18930 PF00411 Ribosomal protein S11 CP478_RS18935 PF00416 Ribosomal protein S13/S18 CP478_RS18940 PF00444 Ribosomal protein L36 CP478_RS18945 PF01176 Translation initiation factor 1A / IF-1 CP478_RS18955 PF16363 GDP-mannose 4,6 dehydratase CP478_RS18960 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CP478_RS18980 PF16363 GDP-mannose 4,6 dehydratase CP478_RS18985 PF00682 HMGL-like CP478_RS18990 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CP478_RS18990 PF00205 Thiamine pyrophosphate enzyme, central domain CP478_RS18990 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CP478_RS19015 PF00083 Sugar (and other) transporter CP478_RS19020 PF00934 PE family CP478_RS19025 PF00823 PPE family CP478_RS19025 PF12484 Polymorphic PE/PPE proteins C terminal CP478_RS19030 PF01734 Patatin-like phospholipase CP478_RS19030 PF11856 Protein of unknown function (DUF3376) CP478_RS19035 PF06974 Protein of unknown function (DUF1298) CP478_RS19035 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain CP478_RS19055 PF03816 Cell envelope-related transcriptional attenuator domain CP478_RS19055 PF13399 LytR cell envelope-related transcriptional attenuator CP478_RS19070 PF07681 DoxX CP478_RS19075 PF07859 alpha/beta hydrolase fold CP478_RS19080 PF03551 Transcriptional regulator PadR-like family CP478_RS19090 PF00982 Glycosyltransferase family 20 CP478_RS19115 PF02470 MlaD protein CP478_RS19140 PF02405 Permease MlaE CP478_RS19145 PF02405 Permease MlaE CP478_RS19160 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CP478_RS19160 PF02770 Acyl-CoA dehydrogenase, middle domain CP478_RS19160 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CP478_RS19165 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CP478_RS19165 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CP478_RS19170 PF00501 AMP-binding enzyme CP478_RS19170 PF13193 AMP-binding enzyme C-terminal domain CP478_RS19175 PF00934 PE family CP478_RS19185 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CP478_RS19185 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CP478_RS19200 PF13193 AMP-binding enzyme C-terminal domain CP478_RS19200 PF00501 AMP-binding enzyme CP478_RS19205 PF00934 PE family CP478_RS19215 PF13193 AMP-binding enzyme C-terminal domain CP478_RS19215 PF00501 AMP-binding enzyme CP478_RS19220 PF00378 Enoyl-CoA hydratase/isomerase CP478_RS19230 PF00067 Cytochrome P450 CP478_RS19240 PF00296 Luciferase-like monooxygenase CP478_RS19250 PF02803 Thiolase, C-terminal domain CP478_RS19250 PF00108 Thiolase, N-terminal domain CP478_RS19255 PF00814 Glycoprotease family CP478_RS19265 PF00132 Bacterial transferase hexapeptide (six repeats) CP478_RS19270 PF00355 Rieske [2Fe-2S] domain CP478_RS19310 PF00823 PPE family CP478_RS19310 PF12484 Polymorphic PE/PPE proteins C terminal CP478_RS19315 PF00823 PPE family CP478_RS19315 PF01469 Pentapeptide repeats (8 copies) CP478_RS19320 PF07836 DmpG-like communication domain CP478_RS19320 PF00682 HMGL-like CP478_RS19325 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation CP478_RS19325 PF01118 Semialdehyde dehydrogenase, NAD binding domain CP478_RS19330 PF01557 Fumarylacetoacetate (FAA) hydrolase family CP478_RS19335 PF00890 FAD binding domain CP478_RS19340 PF01575 MaoC like domain CP478_RS19345 PF00823 PPE family CP478_RS19345 PF08237 PE-PPE domain CP478_RS19360 PF13452 N-terminal half of MaoC dehydratase CP478_RS19365 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CP478_RS19365 PF02770 Acyl-CoA dehydrogenase, middle domain CP478_RS19365 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CP478_RS19370 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CP478_RS19370 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CP478_RS19375 PF00067 Cytochrome P450 CP478_RS19380 PF00108 Thiolase, N-terminal domain CP478_RS19380 PF02803 Thiolase, C-terminal domain CP478_RS19385 PF04075 F420H(2)-dependent quinone reductase CP478_RS19390 PF00106 short chain dehydrogenase CP478_RS19405 PF00378 Enoyl-CoA hydratase/isomerase CP478_RS19410 PF01144 Coenzyme A transferase CP478_RS19420 PF03060 Nitronate monooxygenase CP478_RS19425 PF00175 Oxidoreductase NAD-binding domain CP478_RS19425 PF00970 Oxidoreductase FAD-binding domain CP478_RS19425 PF00111 2Fe-2S iron-sulfur cluster binding domain CP478_RS19435 PF02803 Thiolase, C-terminal domain CP478_RS19435 PF00108 Thiolase, N-terminal domain CP478_RS19440 PF17932 Tetracyclin repressor-like, C-terminal domain CP478_RS19440 PF00440 Bacterial regulatory proteins, tetR family CP478_RS19445 PF01469 Pentapeptide repeats (8 copies) CP478_RS19445 PF00823 PPE family CP478_RS19455 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CP478_RS19455 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CP478_RS19455 PF02770 Acyl-CoA dehydrogenase, middle domain CP478_RS19460 PF00501 AMP-binding enzyme CP478_RS19460 PF13193 AMP-binding enzyme C-terminal domain CP478_RS19465 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CP478_RS19465 PF02770 Acyl-CoA dehydrogenase, middle domain CP478_RS19465 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CP478_RS19470 PF02770 Acyl-CoA dehydrogenase, middle domain CP478_RS19470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CP478_RS19470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CP478_RS19475 PF02770 Acyl-CoA dehydrogenase, middle domain CP478_RS19475 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CP478_RS19475 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CP478_RS19480 PF00155 Aminotransferase class I and II CP478_RS19485 PF00797 N-acetyltransferase CP478_RS19500 PF01613 Flavin reductase like domain CP478_RS19505 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CP478_RS19510 PF00561 alpha/beta hydrolase fold CP478_RS19515 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CP478_RS19520 PF00175 Oxidoreductase NAD-binding domain CP478_RS19520 PF00111 2Fe-2S iron-sulfur cluster binding domain CP478_RS19520 PF00970 Oxidoreductase FAD-binding domain CP478_RS19530 PF02770 Acyl-CoA dehydrogenase, middle domain CP478_RS19530 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CP478_RS19530 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CP478_RS19535 PF17925 Tetracyclin repressor-like, C-terminal domain CP478_RS19535 PF00440 Bacterial regulatory proteins, tetR family CP478_RS19540 PF00356 Bacterial regulatory proteins, lacI family CP478_RS19560 PF08032 RNA 2'-O ribose methyltransferase substrate binding CP478_RS19560 PF00588 SpoU rRNA Methylase family CP478_RS19565 PF09190 DALR domain CP478_RS19565 PF01406 tRNA synthetases class I (C) catalytic domain CP478_RS19570 PF02542 YgbB family CP478_RS19575 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CP478_RS19580 PF02559 CarD-like/TRCF domain CP478_RS19590 PF18073 Rubredoxin metal binding domain CP478_RS19595 PF02457 DisA bacterial checkpoint controller nucleotide-binding CP478_RS19595 PF10635 DisA bacterial checkpoint controller linker region CP478_RS19605 PF00484 Carbonic anhydrase CP478_RS19610 PF00633 Helix-hairpin-helix motif CP478_RS19610 PF00730 HhH-GPD superfamily base excision DNA repair protein CP478_RS19615 PF00934 PE family CP478_RS19625 PF03992 Antibiotic biosynthesis monooxygenase CP478_RS19640 PF00934 PE family CP478_RS19645 PF17871 AAA lid domain CP478_RS19645 PF00004 ATPase family associated with various cellular activities (AAA) CP478_RS19645 PF02861 Clp amino terminal domain, pathogenicity island component CP478_RS19645 PF07724 AAA domain (Cdc48 subfamily) CP478_RS19645 PF10431 C-terminal, D2-small domain, of ClpB protein CP478_RS19650 PF11774 Lsr2 CP478_RS19655 PF01336 OB-fold nucleic acid binding domain CP478_RS19655 PF00152 tRNA synthetases class II (D, K and N) CP478_RS19660 PF03309 Type III pantothenate kinase CP478_RS19665 PF02261 Aspartate decarboxylase CP478_RS19670 PF02569 Pantoate-beta-alanine ligase CP478_RS19690 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CP478_RS19695 PF02152 Dihydroneopterin aldolase CP478_RS19700 PF00809 Pterin binding enzyme CP478_RS19705 PF01227 GTP cyclohydrolase I CP478_RS19710 PF17862 AAA+ lid domain CP478_RS19710 PF01434 Peptidase family M41 CP478_RS19710 PF00004 ATPase family associated with various cellular activities (AAA) CP478_RS19740 PF10824 Excreted virulence factor EspC, type VII ESX diderm CP478_RS19755 PF00561 alpha/beta hydrolase fold CP478_RS19760 PF00296 Luciferase-like monooxygenase CP478_RS19765 PF06013 Proteins of 100 residues with WXG CP478_RS19770 PF06013 Proteins of 100 residues with WXG CP478_RS19775 PF00823 PPE family CP478_RS19775 PF12484 Polymorphic PE/PPE proteins C terminal CP478_RS19780 PF00934 PE family CP478_RS19790 PF00156 Phosphoribosyl transferase domain CP478_RS19795 PF01171 PP-loop family CP478_RS19795 PF09179 TilS substrate binding domain CP478_RS19805 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CP478_RS19810 PF00719 Inorganic pyrophosphatase CP478_RS19835 PF05721 Phytanoyl-CoA dioxygenase (PhyH) CP478_RS19840 PF16363 GDP-mannose 4,6 dehydratase CP478_RS19855 PF01695 IstB-like ATP binding protein CP478_RS19865 PF00872 Transposase, Mutator family CP478_RS19870 PF02661 Fic/DOC family CP478_RS19890 PF09115 DNA polymerase III, delta subunit, C terminal CP478_RS19895 PF00211 Adenylate and Guanylate cyclase catalytic domain CP478_RS19895 PF00672 HAMP domain CP478_RS19900 PF13368 Topoisomerase C-terminal repeat CP478_RS19900 PF01751 Toprim domain CP478_RS19900 PF01131 DNA topoisomerase CP478_RS19910 PF00313 'Cold-shock' DNA-binding domain CP478_RS19915 PF00270 DEAD/DEAH box helicase CP478_RS19915 PF09369 Domain of unknown function (DUF1998) CP478_RS19915 PF00271 Helicase conserved C-terminal domain CP478_RS19920 PF00934 PE family CP478_RS19970 PF00437 Type II/IV secretion system protein CP478_RS20000 PF00005 ABC transporter CP478_RS20000 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CP478_RS20005 PF12911 N-terminal TM domain of oligopeptide transport permease C CP478_RS20005 PF00528 Binding-protein-dependent transport system inner membrane component CP478_RS20010 PF00528 Binding-protein-dependent transport system inner membrane component CP478_RS20025 PF13193 AMP-binding enzyme C-terminal domain CP478_RS20025 PF00501 AMP-binding enzyme CP478_RS20025 PF16177 Acetyl-coenzyme A synthetase N-terminus CP478_RS20045 PF02674 Colicin V production protein CP478_RS20050 PF00293 NUDIX domain CP478_RS20060 PF10576 Iron-sulfur binding domain of endonuclease III CP478_RS20060 PF00730 HhH-GPD superfamily base excision DNA repair protein CP478_RS20060 PF00633 Helix-hairpin-helix motif CP478_RS20070 PF00027 Cyclic nucleotide-binding domain CP478_RS20070 PF13545 Crp-like helix-turn-helix domain CP478_RS20075 PF00753 Metallo-beta-lactamase superfamily CP478_RS20075 PF16123 Hydroxyacylglutathione hydrolase C-terminus CP478_RS20090 PF02374 Anion-transporting ATPase CP478_RS20095 PF02374 Anion-transporting ATPase CP478_RS20100 PF02467 Transcription factor WhiB CP478_RS20105 PF00912 Transglycosylase CP478_RS20105 PF00905 Penicillin binding protein transpeptidase domain CP478_RS20110 PF00149 Calcineurin-like phosphoesterase CP478_RS20115 PF00291 Pyridoxal-phosphate dependent enzyme CP478_RS20130 PF00067 Cytochrome P450 CP478_RS20140 PF01740 STAS domain CP478_RS20160 PF14258 Domain of unknown function (DUF4350) CP478_RS20165 PF17863 AAA lid domain CP478_RS20165 PF07726 ATPase family associated with various cellular activities (AAA) CP478_RS20190 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CP478_RS20190 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CP478_RS20195 PF01850 PIN domain CP478_RS20210 PF13847 Methyltransferase domain CP478_RS20215 PF00266 Aminotransferase class-V CP478_RS20220 PF10017 Histidine-specific methyltransferase, SAM-dependent CP478_RS20230 PF12867 DinB superfamily CP478_RS20230 PF03781 Sulfatase-modifying factor enzyme 1 CP478_RS20235 PF04107 Glutamate-cysteine ligase family 2(GCS2) CP478_RS20255 PF13810 Domain of unknown function (DUF4185) CP478_RS20260 PF02774 Semialdehyde dehydrogenase, dimerisation domain CP478_RS20260 PF01118 Semialdehyde dehydrogenase, NAD binding domain CP478_RS20265 PF01842 ACT domain CP478_RS20265 PF13840 ACT domain CP478_RS20265 PF00696 Amino acid kinase family CP478_RS20270 PF00682 HMGL-like CP478_RS20270 PF08502 LeuA allosteric (dimerisation) domain CP478_RS20280 PF08245 Mur ligase middle domain CP478_RS20280 PF02875 Mur ligase family, glutamate ligase domain CP478_RS20295 PF02132 RecR protein CP478_RS20295 PF13662 Toprim domain CP478_RS20300 PF02575 YbaB/EbfC DNA-binding family CP478_RS20305 PF01520 N-acetylmuramoyl-L-alanine amidase CP478_RS20325 PF12169 DNA polymerase III subunits gamma and tau domain III CP478_RS20330 PF12897 Alanine-glyoxylate amino-transferase CP478_RS20360 PF08240 Alcohol dehydrogenase GroES-like domain CP478_RS20360 PF00107 Zinc-binding dehydrogenase CP478_RS20365 PF01593 Flavin containing amine oxidoreductase CP478_RS20370 PF07690 Major Facilitator Superfamily CP478_RS20375 PF13649 Methyltransferase domain CP478_RS20380 PF13298 DNA polymerase Ligase (LigD) CP478_RS20380 PF04679 ATP dependent DNA ligase C terminal region CP478_RS20380 PF01068 ATP dependent DNA ligase domain CP478_RS20385 PF01068 ATP dependent DNA ligase domain CP478_RS20385 PF04679 ATP dependent DNA ligase C terminal region CP478_RS20400 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain CP478_RS20400 PF06974 Protein of unknown function (DUF1298) CP478_RS20425 PF06974 Protein of unknown function (DUF1298) CP478_RS20425 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain CP478_RS20430 PF00743 Flavin-binding monooxygenase-like CP478_RS20435 PF00743 Flavin-binding monooxygenase-like CP478_RS20445 PF01022 Bacterial regulatory protein, arsR family CP478_RS20455 PF00934 PE family CP478_RS20475 PF12728 Helix-turn-helix domain CP478_RS20485 PF00589 Phage integrase family CP478_RS20485 PF02899 Phage integrase, N-terminal SAM-like domain CP478_RS20495 PF14437 MafB19-like deaminase CP478_RS20505 PF02153 Prephenate dehydrogenase CP478_RS20515 PF00528 Binding-protein-dependent transport system inner membrane component CP478_RS20520 PF00528 Binding-protein-dependent transport system inner membrane component CP478_RS20525 PF00571 CBS domain CP478_RS20525 PF00005 ABC transporter CP478_RS20535 PF06305 Lipopolysaccharide assembly protein A domain CP478_RS20545 PF00753 Metallo-beta-lactamase superfamily CP478_RS20545 PF14864 Alkyl sulfatase C-terminal CP478_RS20545 PF14863 Alkyl sulfatase dimerisation CP478_RS20550 PF05481 Mycobacterium 19 kDa lipoprotein antigen CP478_RS20555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CP478_RS20555 PF00672 HAMP domain CP478_RS20555 PF00512 His Kinase A (phospho-acceptor) domain CP478_RS20560 PF00072 Response regulator receiver domain CP478_RS20560 PF00486 Transcriptional regulatory protein, C terminal CP478_RS20570 PF04072 Leucine carboxyl methyltransferase CP478_RS20610 PF00155 Aminotransferase class I and II CP478_RS20620 PF00378 Enoyl-CoA hydratase/isomerase CP478_RS20625 PF00144 Beta-lactamase CP478_RS20640 PF08240 Alcohol dehydrogenase GroES-like domain CP478_RS20640 PF00107 Zinc-binding dehydrogenase CP478_RS20645 PF00266 Aminotransferase class-V CP478_RS20655 PF10759 Protein of unknown function (DUF2587) CP478_RS20660 PF00005 ABC transporter CP478_RS20670 PF01061 ABC-2 type transporter CP478_RS20675 PF16363 GDP-mannose 4,6 dehydratase CP478_RS20685 PF01551 Peptidase family M23 CP478_RS20690 PF04072 Leucine carboxyl methyltransferase CP478_RS20695 PF01272 Transcription elongation factor, GreA/GreB, C-term CP478_RS20700 PF04138 GtrA-like protein CP478_RS20705 PF04030 D-arabinono-1,4-lactone oxidase CP478_RS20705 PF01565 FAD binding domain CP478_RS20710 PF00106 short chain dehydrogenase CP478_RS20715 PF12250 Arabinofuranosyltransferase N terminal CP478_RS20715 PF12249 Arabinofuranosyltransferase A C terminal CP478_RS20720 PF14896 EmbC C-terminal domain CP478_RS20720 PF17689 Arabinosyltransferase concanavalin like domain CP478_RS20720 PF04602 Mycobacterial cell wall arabinan synthesis protein CP478_RS20725 PF17689 Arabinosyltransferase concanavalin like domain CP478_RS20725 PF04602 Mycobacterial cell wall arabinan synthesis protein CP478_RS20725 PF14896 EmbC C-terminal domain CP478_RS20730 PF04602 Mycobacterial cell wall arabinan synthesis protein CP478_RS20730 PF14896 EmbC C-terminal domain CP478_RS20730 PF17689 Arabinosyltransferase concanavalin like domain CP478_RS20735 PF12706 Beta-lactamase superfamily domain CP478_RS20740 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CP478_RS20740 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CP478_RS20740 PF02770 Acyl-CoA dehydrogenase, middle domain CP478_RS20745 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 CP478_RS20745 PF13542 Helix-turn-helix domain of transposase family ISL3 CP478_RS20745 PF01610 Transposase CP478_RS20750 PF01039 Carboxyl transferase domain CP478_RS20755 PF16197 Ketoacyl-synthetase C-terminal extension CP478_RS20755 PF00550 Phosphopantetheine attachment site CP478_RS20755 PF00975 Thioesterase domain CP478_RS20755 PF00109 Beta-ketoacyl synthase, N-terminal domain CP478_RS20755 PF00698 Acyl transferase domain CP478_RS20755 PF02801 Beta-ketoacyl synthase, C-terminal domain CP478_RS20760 PF00501 AMP-binding enzyme CP478_RS20765 PF01083 Cutinase CP478_RS20770 PF00756 Putative esterase CP478_RS20775 PF00756 Putative esterase CP478_RS20785 PF01040 UbiA prenyltransferase family CP478_RS20790 PF01569 PAP2 superfamily CP478_RS20795 PF17994 Galactofuranosyltransferase 2 N-terminal CP478_RS20800 PF03275 UDP-galactopyranose mutase CP478_RS20805 PF01744 GLTT repeat (6 copies) CP478_RS20815 PF00934 PE family CP478_RS20845 PF01553 Acyltransferase CP478_RS20850 PF01636 Phosphotransferase enzyme family CP478_RS20855 PF00355 Rieske [2Fe-2S] domain CP478_RS20865 PF00668 Condensation domain CP478_RS20870 PF11139 Sap, sulfolipid-1-addressing protein CP478_RS20875 PF08237 PE-PPE domain CP478_RS20880 PF03176 MMPL family CP478_RS20885 PF00668 Condensation domain CP478_RS20890 PF08659 KR domain CP478_RS20890 PF00109 Beta-ketoacyl synthase, N-terminal domain CP478_RS20890 PF02801 Beta-ketoacyl synthase, C-terminal domain CP478_RS20890 PF00550 Phosphopantetheine attachment site CP478_RS20890 PF16197 Ketoacyl-synthetase C-terminal extension CP478_RS20890 PF14765 Polyketide synthase dehydratase CP478_RS20890 PF08240 Alcohol dehydrogenase GroES-like domain CP478_RS20890 PF00107 Zinc-binding dehydrogenase CP478_RS20890 PF00698 Acyl transferase domain CP478_RS20900 PF00501 AMP-binding enzyme CP478_RS20910 PF00239 Resolvase, N terminal domain CP478_RS20915 PF01593 Flavin containing amine oxidoreductase CP478_RS20930 PF00398 Ribosomal RNA adenine dimethylase CP478_RS20935 PF12833 Helix-turn-helix domain CP478_RS20940 PF02403 Seryl-tRNA synthetase N-terminal domain CP478_RS20940 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CP478_RS20945 PF13845 Septum formation CP478_RS20965 PF01842 ACT domain CP478_RS20965 PF00800 Prephenate dehydratase CP478_RS20975 PF03816 Cell envelope-related transcriptional attenuator domain CP478_RS20980 PF00210 Ferritin-like domain CP478_RS20985 PF03009 Glycerophosphoryl diester phosphodiesterase family CP478_RS21025 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CP478_RS21025 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CP478_RS21040 PF01169 Uncharacterized protein family UPF0016 CP478_RS21065 PF03737 Aldolase/RraA CP478_RS21070 PF00743 Flavin-binding monooxygenase-like CP478_RS21075 PF00440 Bacterial regulatory proteins, tetR family CP478_RS21080 PF02811 PHP domain CP478_RS21080 PF14716 Helix-hairpin-helix domain CP478_RS21080 PF14791 DNA polymerase beta thumb CP478_RS21090 PF07992 Pyridine nucleotide-disulphide oxidoreductase CP478_RS21090 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CP478_RS21095 PF01493 GXGXG motif CP478_RS21095 PF01645 Conserved region in glutamate synthase CP478_RS21095 PF04898 Glutamate synthase central domain CP478_RS21095 PF00310 Glutamine amidotransferases class-II CP478_RS21105 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CP478_RS21115 PF02467 Transcription factor WhiB CP478_RS21130 PF10824 Excreted virulence factor EspC, type VII ESX diderm CP478_RS21135 PF14011 EspG family CP478_RS21145 PF00004 ATPase family associated with various cellular activities (AAA) CP478_RS21145 PF17866 AAA lid domain CP478_RS21150 PF05108 Type VII secretion system ESX-1, transport TM domain B CP478_RS21155 PF01580 FtsK/SpoIIIE family CP478_RS21165 PF01580 FtsK/SpoIIIE family CP478_RS21170 PF00934 PE family CP478_RS21175 PF00823 PPE family CP478_RS21180 PF06013 Proteins of 100 residues with WXG CP478_RS21185 PF06013 Proteins of 100 residues with WXG CP478_RS21190 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CP478_RS21195 PF08817 WXG100 protein secretion system (Wss), protein YukD CP478_RS21210 PF02575 YbaB/EbfC DNA-binding family CP478_RS21215 PF18625 ESX-1 secreted protein B PE domain CP478_RS21220 PF11203 Putative type VII ESX secretion system translocon, EccE CP478_RS21225 PF00082 Subtilase family CP478_RS21230 PF17866 AAA lid domain CP478_RS21230 PF00004 ATPase family associated with various cellular activities (AAA) CP478_RS21235 PF11203 Putative type VII ESX secretion system translocon, EccE CP478_RS21240 PF00082 Subtilase family CP478_RS21245 PF08817 WXG100 protein secretion system (Wss), protein YukD CP478_RS21250 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CP478_RS21255 PF14011 EspG family CP478_RS21260 PF06013 Proteins of 100 residues with WXG CP478_RS21265 PF06013 Proteins of 100 residues with WXG CP478_RS21270 PF00823 PPE family CP478_RS21280 PF01580 FtsK/SpoIIIE family CP478_RS21285 PF05108 Type VII secretion system ESX-1, transport TM domain B CP478_RS21305 PF18646 Family of unknown function (DUF5632) CP478_RS21305 PF18645 Family of unknown function (DUF5631) CP478_RS21310 PF18646 Family of unknown function (DUF5632) CP478_RS21310 PF18645 Family of unknown function (DUF5631) CP478_RS21320 PF15598 Immunity protein 61 CP478_RS21325 PF14021 Tuberculosis necrotizing toxin CP478_RS21330 PF06013 Proteins of 100 residues with WXG CP478_RS21335 PF06013 Proteins of 100 residues with WXG CP478_RS21345 PF12627 Probable RNA and SrmB- binding site of polymerase A CP478_RS21345 PF01743 Poly A polymerase head domain CP478_RS21345 PF13735 tRNA nucleotidyltransferase domain 2 putative CP478_RS21355 PF00293 NUDIX domain CP478_RS21365 PF03023 Lipid II flippase MurJ CP478_RS21370 PF08281 Sigma-70, region 4 CP478_RS21370 PF04542 Sigma-70 region 2 CP478_RS21380 PF07992 Pyridine nucleotide-disulphide oxidoreductase CP478_RS21385 PF00085 Thioredoxin CP478_RS21390 PF01471 Putative peptidoglycan binding domain CP478_RS21390 PF01520 N-acetylmuramoyl-L-alanine amidase CP478_RS21405 PF02195 ParB-like nuclease domain CP478_RS21405 PF17762 HTH domain found in ParB protein CP478_RS21410 PF13614 AAA domain CP478_RS21415 PF02527 rRNA small subunit methyltransferase G CP478_RS21425 PF02096 60Kd inner membrane protein CP478_RS21430 PF01809 Putative membrane protein insertion efficiency factor CP478_RS21435 PF00825 Ribonuclease P CP478_RS21440 PF00468 Ribosomal protein L34