CP495_RS00005	SM00382	ATPases associated with a variety of cellular activities
CP495_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
CP495_RS00010	SM00480	DNA polymerase III beta subunit
CP495_RS00025	SM00387	Histidine kinase-like ATPases
CP495_RS00025	SM00433	TopoisomeraseII
CP495_RS00030	SM00434	DNA Topoisomerase IV
CP495_RS00085	SM00220	Serine/Threonine protein kinases, catalytic domain
CP495_RS00085	SM00740	CP495_RS00085
CP495_RS00090	SM00220	Serine/Threonine protein kinases, catalytic domain
CP495_RS00105	SM00331	Sigma factor PP2C-like phosphatases
CP495_RS00105	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CP495_RS00110	SM00240	Forkhead associated domain
CP495_RS00115	SM00240	Forkhead associated domain
CP495_RS00135	SM00530	Helix-turn-helix XRE-family like proteins 
CP495_RS00235	SM00347	helix_turn_helix multiple antibiotic resistance protein
CP495_RS00240	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CP495_RS00315	SM00305	Hint (Hedgehog/Intein) domain C-terminal region
CP495_RS00315	SM00306	Hint (Hedgehog/Intein) domain N-terminal region
CP495_RS00315	SM00382	ATPases associated with a variety of cellular activities
CP495_RS00325	SM00506	Appr-1"-p processing enzyme
CP495_RS00405	SM00100	Cyclic nucleotide-monophosphate binding domain
CP495_RS00405	SM00382	ATPases associated with a variety of cellular activities
CP495_RS00455	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CP495_RS00560	SM00823	Phosphopantetheine attachment site
CP495_RS00575	SM00100	Cyclic nucleotide-monophosphate binding domain
CP495_RS00585	SM00833	Cobalamin synthesis protein cobW C-terminal domain
CP495_RS00660	SM00838	Elongation factor G C-terminus
CP495_RS00660	SM00889	Elongation factor G, domain IV
CP495_RS00685	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CP495_RS00690	SM00642	Alpha-amylase domain
CP495_RS00800	SM00822	CP495_RS00800
CP495_RS00805	SM00829	Enoylreductase
CP495_RS00850	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CP495_RS00850	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CP495_RS00890	SM00829	Enoylreductase
CP495_RS01015	SM01217	CP495_RS01015
CP495_RS01060	SM00382	ATPases associated with a variety of cellular activities
CP495_RS01065	SM00421	helix_turn_helix, Lux Regulon
CP495_RS01075	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CP495_RS01155	SM00729	Elongator protein 3, MiaB family, Radical SAM
CP495_RS01310	SM00822	CP495_RS01310
CP495_RS01325	SM00903	Flavin reductase like domain
CP495_RS01405	SM00862	Transcriptional regulatory protein, C terminal
CP495_RS01420	SM00797	Allophanate hydrolase subunit 2
CP495_RS01425	SM00796	Allophanate hydrolase subunit 1
CP495_RS01525	SM00382	ATPases associated with a variety of cellular activities
CP495_RS01535	SM00382	ATPases associated with a variety of cellular activities
CP495_RS01630	SM00822	CP495_RS01630
CP495_RS01650	SM00014	Acid phosphatase homologues
CP495_RS01725	SM00984	UDP binding domain
CP495_RS01735	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CP495_RS01735	SM00450	Rhodanese Homology Domain
CP495_RS01795	SM00507	HNH nucleases
CP495_RS01815	SM00421	helix_turn_helix, Lux Regulon
CP495_RS01880	SM00271	DnaJ molecular chaperone homology domain
CP495_RS01885	SM00422	helix_turn_helix, mercury resistance
CP495_RS01900	SM00788	Adenylosuccinate synthetase
CP495_RS01925	SM00116	Domain in cystathionine beta-synthase and other proteins.
CP495_RS01925	SM00924	MgtE intracellular N domain
CP495_RS01955	SM00327	von Willebrand factor (vWF) type A domain
CP495_RS01965	SM00382	ATPases associated with a variety of cellular activities
CP495_RS01980	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CP495_RS01990	SM01092	CO dehydrogenase flavoprotein C-terminal domain
CP495_RS02035	SM00382	ATPases associated with a variety of cellular activities
CP495_RS02035	SM01086	C-terminal, D2-small domain, of ClpB protein
CP495_RS02045	SM00421	helix_turn_helix, Lux Regulon
CP495_RS02065	SM00450	Rhodanese Homology Domain
CP495_RS02080	SM00507	HNH nucleases
CP495_RS02150	SM00823	Phosphopantetheine attachment site
CP495_RS02150	SM00824	Thioesterase
CP495_RS02150	SM00825	Beta-ketoacyl synthase
CP495_RS02150	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CP495_RS02155	SM00849	Metallo-beta-lactamase superfamily
CP495_RS02175	SM00220	Serine/Threonine protein kinases, catalytic domain
CP495_RS02180	SM00062	Bacterial periplasmic substrate-binding proteins
CP495_RS02300	SM00464	Found in ATP-dependent protease La (LON)
CP495_RS02305	SM00382	ATPases associated with a variety of cellular activities
CP495_RS02305	SM01073	Cell division protein 48 (CDC48) N-terminal domain
CP495_RS02320	SM00852	Probable molybdopterin binding domain
CP495_RS02470	SM00530	Helix-turn-helix XRE-family like proteins 
CP495_RS02520	SM00530	Helix-turn-helix XRE-family like proteins 
CP495_RS02540	SM01133	CP495_RS02540
CP495_RS02595	SM00855	Phosphoglycerate mutase family
CP495_RS02600	SM00387	Histidine kinase-like ATPases
CP495_RS02600	SM00388	His Kinase A (phosphoacceptor) domain
CP495_RS02610	SM00448	cheY-homologous receiver domain
CP495_RS02610	SM00862	Transcriptional regulatory protein, C terminal
CP495_RS02630	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CP495_RS02630	SM00895	CP495_RS02630
CP495_RS02655	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CP495_RS02670	SM01155	CP495_RS02670
CP495_RS02680	SM00563	Phosphate acyltransferases
CP495_RS02730	SM01004	Delta-aminolevulinic acid dehydratase
CP495_RS02745	SM00507	HNH nucleases
CP495_RS02800	SM00855	Phosphoglycerate mutase family
CP495_RS02950	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CP495_RS03065	SM00854	Bacterial capsule synthesis protein PGA_cap
CP495_RS03075	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CP495_RS03130	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CP495_RS03130	SM00895	CP495_RS03130
CP495_RS03195	SM00966	SpoVT / AbrB like domain 
CP495_RS03200	SM00387	Histidine kinase-like ATPases
CP495_RS03205	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CP495_RS03210	SM00448	cheY-homologous receiver domain
CP495_RS03210	SM00862	Transcriptional regulatory protein, C terminal
CP495_RS03225	SM00857	Resolvase, N terminal domain
CP495_RS03365	SM00897	FIST N domain
CP495_RS03365	SM01204	CP495_RS03365
CP495_RS03395	SM00849	Metallo-beta-lactamase superfamily
CP495_RS03445	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CP495_RS03450	SM00649	Ribosomal protein L11/L12
CP495_RS03490	SM00872	Alpha mannosidase, middle domain
CP495_RS03525	SM00382	ATPases associated with a variety of cellular activities
CP495_RS03595	SM00663	RNA polymerase I subunit A N-terminus
CP495_RS03615	SM00518	AP endonuclease family 2
CP495_RS03685	SM00838	Elongation factor G C-terminus
CP495_RS03685	SM00889	Elongation factor G, domain IV
CP495_RS03700	SM00822	CP495_RS03700
CP495_RS03740	SM00729	Elongator protein 3, MiaB family, Radical SAM
CP495_RS03790	SM01403	CP495_RS03790
CP495_RS03810	SM01382	CP495_RS03810
CP495_RS03810	SM01383	CP495_RS03810
CP495_RS03825	SM00322	K homology RNA-binding domain
CP495_RS03860	SM01374	CP495_RS03860
CP495_RS03865	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CP495_RS03925	SM01007	Class II Aldolase and Adducin N-terminal domain
CP495_RS03980	SM00347	helix_turn_helix multiple antibiotic resistance protein
CP495_RS04090	SM00855	Phosphoglycerate mutase family
CP495_RS04115	SM00448	cheY-homologous receiver domain
CP495_RS04115	SM00862	Transcriptional regulatory protein, C terminal
CP495_RS04120	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CP495_RS04120	SM00387	Histidine kinase-like ATPases
CP495_RS04120	SM00388	His Kinase A (phosphoacceptor) domain
CP495_RS04135	SM00829	Enoylreductase
CP495_RS04190	SM01209	CP495_RS04190
CP495_RS04190	SM01210	CP495_RS04190
CP495_RS04215	SM00998	Adenylosuccinate lyase C-terminus
CP495_RS04260	SM00849	Metallo-beta-lactamase superfamily
CP495_RS04275	SM01211	CP495_RS04275
CP495_RS04285	SM00460	Transglutaminase/protease-like homologues
CP495_RS04295	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CP495_RS04295	SM00866	CP495_RS04295
CP495_RS04415	SM00450	Rhodanese Homology Domain
CP495_RS04430	SM00862	Transcriptional regulatory protein, C terminal
CP495_RS04440	SM00382	ATPases associated with a variety of cellular activities
CP495_RS04475	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CP495_RS04600	SM00421	helix_turn_helix, Lux Regulon
CP495_RS04600	SM00448	cheY-homologous receiver domain
CP495_RS04605	SM00387	Histidine kinase-like ATPases
CP495_RS04690	SM00487	DEAD-like helicases superfamily
CP495_RS04690	SM00490	helicase superfamily c-terminal domain
CP495_RS04710	SM00852	Probable molybdopterin binding domain
CP495_RS04730	SM00729	Elongator protein 3, MiaB family, Radical SAM
CP495_RS04740	SM00357	Cold shock protein domain
CP495_RS04760	SM00897	FIST N domain
CP495_RS04760	SM01204	CP495_RS04760
CP495_RS04790	SM00347	helix_turn_helix multiple antibiotic resistance protein
CP495_RS04845	SM00421	helix_turn_helix, Lux Regulon
CP495_RS04850	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
CP495_RS04910	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CP495_RS04910	SM00387	Histidine kinase-like ATPases
CP495_RS04910	SM00388	His Kinase A (phosphoacceptor) domain
CP495_RS04915	SM00448	cheY-homologous receiver domain
CP495_RS04915	SM00862	Transcriptional regulatory protein, C terminal
CP495_RS05020	SM00857	Resolvase, N terminal domain
CP495_RS05070	SM00220	Serine/Threonine protein kinases, catalytic domain
CP495_RS05080	SM00382	ATPases associated with a variety of cellular activities
CP495_RS05100	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
CP495_RS05110	SM00849	Metallo-beta-lactamase superfamily
CP495_RS05135	SM01232	CP495_RS05135
CP495_RS05165	SM00830	Chorismate mutase type II
CP495_RS05185	SM00881	CoA binding domain
CP495_RS05215	SM00798	AICARFT/IMPCHase bienzyme
CP495_RS05215	SM00851	MGS-like domain
CP495_RS05225	SM00327	von Willebrand factor (vWF) type A domain
CP495_RS05300	SM00878	Biotin carboxylase C-terminal domain
CP495_RS05350	SM00448	cheY-homologous receiver domain
CP495_RS05350	SM00862	Transcriptional regulatory protein, C terminal
CP495_RS05355	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CP495_RS05355	SM00387	Histidine kinase-like ATPases
CP495_RS05355	SM00388	His Kinase A (phosphoacceptor) domain
CP495_RS05360	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CP495_RS05365	SM00852	Probable molybdopterin binding domain
CP495_RS05375	SM00382	ATPases associated with a variety of cellular activities
CP495_RS05395	SM00858	CP495_RS05395
CP495_RS05400	SM00834	Putative regulatory protein
CP495_RS05415	SM00852	Probable molybdopterin binding domain
CP495_RS05455	SM00100	Cyclic nucleotide-monophosphate binding domain
CP495_RS05510	SM01208	CP495_RS05510
CP495_RS05515	SM00650	Ribosomal RNA adenine dimethylases
CP495_RS05555	SM01400	CP495_RS05555
CP495_RS05575	SM00487	DEAD-like helicases superfamily
CP495_RS05575	SM00490	helicase superfamily c-terminal domain
CP495_RS05575	SM00982	CP495_RS05575
CP495_RS05575	SM01058	CarD-like/TRCF domain
CP495_RS05590	SM01192	CP495_RS05590
CP495_RS05590	SM01193	CP495_RS05590
CP495_RS05615	SM00448	cheY-homologous receiver domain
CP495_RS05615	SM00862	Transcriptional regulatory protein, C terminal
CP495_RS05620	SM00387	Histidine kinase-like ATPases
CP495_RS05620	SM00388	His Kinase A (phosphoacceptor) domain
CP495_RS05650	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CP495_RS05650	SM00387	Histidine kinase-like ATPases
CP495_RS05650	SM00388	His Kinase A (phosphoacceptor) domain
CP495_RS05655	SM00448	cheY-homologous receiver domain
CP495_RS05655	SM00862	Transcriptional regulatory protein, C terminal
CP495_RS05740	SM00347	helix_turn_helix multiple antibiotic resistance protein
CP495_RS05745	SM00822	CP495_RS05745
CP495_RS05840	SM00450	Rhodanese Homology Domain
CP495_RS05895	SM00116	Domain in cystathionine beta-synthase and other proteins.
CP495_RS06005	SM00670	Large family of predicted nucleotide-binding domains
CP495_RS06135	SM01350	CP495_RS06135
CP495_RS06165	SM00507	HNH nucleases
CP495_RS06170	SM00530	Helix-turn-helix XRE-family like proteins 
CP495_RS06295	SM00507	HNH nucleases
CP495_RS06310	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CP495_RS06370	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CP495_RS06390	SM00838	Elongation factor G C-terminus
CP495_RS06430	SM00729	Elongator protein 3, MiaB family, Radical SAM
CP495_RS06460	SM00487	DEAD-like helicases superfamily
CP495_RS06465	SM00822	CP495_RS06465
CP495_RS06465	SM00823	Phosphopantetheine attachment site
CP495_RS06465	SM00825	Beta-ketoacyl synthase
CP495_RS06465	SM00826	CP495_RS06465
CP495_RS06465	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CP495_RS06465	SM00829	Enoylreductase
CP495_RS06590	SM00382	ATPases associated with a variety of cellular activities
CP495_RS06645	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
CP495_RS06660	SM00382	ATPases associated with a variety of cellular activities
CP495_RS06690	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CP495_RS06740	SM00116	Domain in cystathionine beta-synthase and other proteins.
CP495_RS06740	SM00924	MgtE intracellular N domain
CP495_RS06770	SM00382	ATPases associated with a variety of cellular activities
CP495_RS06810	SM00822	CP495_RS06810
CP495_RS06825	SM00861	Transketolase, pyrimidine binding domain
CP495_RS06850	SM00487	DEAD-like helicases superfamily
CP495_RS06850	SM00490	helicase superfamily c-terminal domain
CP495_RS06880	SM00986	Uracil DNA glycosylase superfamily
CP495_RS06880	SM00987	UreE urease accessory protein, C-terminal domain 
CP495_RS06905	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
CP495_RS06915	SM00220	Serine/Threonine protein kinases, catalytic domain
CP495_RS06920	SM00240	Forkhead associated domain
CP495_RS06920	SM00862	Transcriptional regulatory protein, C terminal
CP495_RS06920	SM01043	Bacterial transcriptional activator domain
CP495_RS06950	SM00382	ATPases associated with a variety of cellular activities
CP495_RS06955	SM00382	ATPases associated with a variety of cellular activities
CP495_RS06970	SM00855	Phosphoglycerate mutase family
CP495_RS06995	SM00382	ATPases associated with a variety of cellular activities
CP495_RS07010	SM00947	Carbonic anhydrase
CP495_RS07030	SM00257	Lysin motif
CP495_RS07060	SM00836	DALR anticodon binding domain
CP495_RS07060	SM01016	Arginyl tRNA synthetase N terminal dom
CP495_RS07095	SM00357	Cold shock protein domain
CP495_RS07095	SM00382	ATPases associated with a variety of cellular activities
CP495_RS07095	SM00959	Rho termination factor, N-terminal domain
CP495_RS07110	SM00937	CP495_RS07110
CP495_RS07165	SM00382	ATPases associated with a variety of cellular activities
CP495_RS07215	SM00342	helix_turn_helix, arabinose operon control protein
CP495_RS07215	SM00478	endonuclease III
CP495_RS07215	SM01009	AlkA N-terminal domain
CP495_RS07220	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
CP495_RS07220	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CP495_RS07225	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
CP495_RS07225	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CP495_RS07230	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
CP495_RS07230	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CP495_RS07265	SM00642	Alpha-amylase domain
CP495_RS07270	SM00642	Alpha-amylase domain
CP495_RS07280	SM00487	DEAD-like helicases superfamily
CP495_RS07280	SM00491	CP495_RS07280
CP495_RS07305	SM00232	JAB/MPN domain
CP495_RS07370	SM01006	Siderophore biosynthesis protein domain
CP495_RS07380	SM00382	ATPases associated with a variety of cellular activities
CP495_RS07385	SM00382	ATPases associated with a variety of cellular activities
CP495_RS07395	SM00822	CP495_RS07395
CP495_RS07420	SM00052	Putative diguanylate phosphodiesterase
CP495_RS07420	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CP495_RS07420	SM00267	diguanylate cyclase
CP495_RS07435	SM00052	Putative diguanylate phosphodiesterase
CP495_RS07475	SM00331	Sigma factor PP2C-like phosphatases
CP495_RS07485	SM00954	Region found in RelA / SpoT proteins
CP495_RS07545	SM00507	HNH nucleases
CP495_RS07570	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
CP495_RS07575	SM00851	MGS-like domain
CP495_RS07575	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CP495_RS07580	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CP495_RS07605	SM00072	Guanylate kinase homologues.
CP495_RS07610	SM01409	CP495_RS07610
CP495_RS07635	SM00342	helix_turn_helix, arabinose operon control protein
CP495_RS07680	SM00347	helix_turn_helix multiple antibiotic resistance protein
CP495_RS07730	SM01119	CP495_RS07730
CP495_RS07755	SM00458	Ricin-type beta-trefoil
CP495_RS07760	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CP495_RS07760	SM00465	GIY-YIG type nucleases (URI domain)
CP495_RS07800	SM00563	Phosphate acyltransferases
CP495_RS07845	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CP495_RS07935	SM00861	Transketolase, pyrimidine binding domain
CP495_RS07965	SM00829	Enoylreductase
CP495_RS07985	SM00382	ATPases associated with a variety of cellular activities
CP495_RS08000	SM00305	Hint (Hedgehog/Intein) domain C-terminal region
CP495_RS08000	SM00306	Hint (Hedgehog/Intein) domain N-terminal region
CP495_RS08010	SM00382	ATPases associated with a variety of cellular activities
CP495_RS08060	SM00382	ATPases associated with a variety of cellular activities
CP495_RS08105	SM00327	von Willebrand factor (vWF) type A domain
CP495_RS08115	SM00822	CP495_RS08115
CP495_RS08140	SM00244	prohibitin homologues
CP495_RS08365	SM00822	CP495_RS08365
CP495_RS08365	SM00823	Phosphopantetheine attachment site
CP495_RS08365	SM00825	Beta-ketoacyl synthase
CP495_RS08365	SM00826	CP495_RS08365
CP495_RS08365	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CP495_RS08365	SM00829	Enoylreductase
CP495_RS08420	SM00870	CP495_RS08420
CP495_RS08430	SM00363	S4 RNA-binding domain
CP495_RS08445	SM00822	CP495_RS08445
CP495_RS08465	SM00481	DNA polymerase alpha chain like domain
CP495_RS08485	SM00563	Phosphate acyltransferases
CP495_RS08540	SM00642	Alpha-amylase domain
CP495_RS08545	SM00642	Alpha-amylase domain
CP495_RS08550	SM00642	Alpha-amylase domain
CP495_RS08645	SM00885	D5 N terminal like
CP495_RS08665	SM00857	Resolvase, N terminal domain
CP495_RS08685	SM00729	Elongator protein 3, MiaB family, Radical SAM
CP495_RS08685	SM00876	Biotin and Thiamin Synthesis associated domain
CP495_RS08845	SM00382	ATPases associated with a variety of cellular activities
CP495_RS08850	SM00382	ATPases associated with a variety of cellular activities
CP495_RS08870	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
CP495_RS08880	SM00448	cheY-homologous receiver domain
CP495_RS08880	SM01012	CP495_RS08880
CP495_RS08895	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CP495_RS08895	SM00474	3'-5' exonuclease
CP495_RS08895	SM00475	5'-3' exonuclease
CP495_RS08895	SM00482	DNA polymerase A domain
CP495_RS08900	SM00316	Ribosomal protein S1-like RNA-binding domain
CP495_RS08920	SM00487	DEAD-like helicases superfamily
CP495_RS08920	SM00490	helicase superfamily c-terminal domain
CP495_RS08945	SM00849	Metallo-beta-lactamase superfamily
CP495_RS08985	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CP495_RS09000	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
CP495_RS09015	SM00873	B3/4 domain
CP495_RS09015	SM00874	tRNA synthetase B5 domain
CP495_RS09015	SM00896	Ferredoxin-fold anticodon binding domain
CP495_RS09025	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CP495_RS09070	SM00822	CP495_RS09070
CP495_RS09070	SM00823	Phosphopantetheine attachment site
CP495_RS09070	SM00825	Beta-ketoacyl synthase
CP495_RS09070	SM00826	CP495_RS09070
CP495_RS09070	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CP495_RS09070	SM00829	Enoylreductase
CP495_RS09070	SM01294	CP495_RS09070
CP495_RS09075	SM00825	Beta-ketoacyl synthase
CP495_RS09075	SM00826	CP495_RS09075
CP495_RS09075	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CP495_RS09075	SM00829	Enoylreductase
CP495_RS09080	SM00822	CP495_RS09080
CP495_RS09080	SM00823	Phosphopantetheine attachment site
CP495_RS09080	SM01294	CP495_RS09080
CP495_RS09085	SM00823	Phosphopantetheine attachment site
CP495_RS09085	SM00825	Beta-ketoacyl synthase
CP495_RS09085	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CP495_RS09100	SM00382	ATPases associated with a variety of cellular activities
CP495_RS09125	SM00460	Transglutaminase/protease-like homologues
CP495_RS09130	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CP495_RS09130	SM00450	Rhodanese Homology Domain
CP495_RS09135	SM00100	Cyclic nucleotide-monophosphate binding domain
CP495_RS09135	SM00419	helix_turn_helix, cAMP Regulatory protein
CP495_RS09195	SM00382	ATPases associated with a variety of cellular activities
CP495_RS09205	SM00363	S4 RNA-binding domain
CP495_RS09230	SM00363	S4 RNA-binding domain
CP495_RS09270	SM00507	HNH nucleases
CP495_RS09320	SM00363	S4 RNA-binding domain
CP495_RS09330	SM00382	ATPases associated with a variety of cellular activities
CP495_RS09335	SM00822	CP495_RS09335
CP495_RS09360	SM00346	helix_turn_helix isocitrate lyase regulation
CP495_RS09360	SM00419	helix_turn_helix, cAMP Regulatory protein
CP495_RS09460	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CP495_RS09495	SM00220	Serine/Threonine protein kinases, catalytic domain
CP495_RS09510	SM00220	Serine/Threonine protein kinases, catalytic domain
CP495_RS09515	SM00240	Forkhead associated domain
CP495_RS09515	SM00382	ATPases associated with a variety of cellular activities
CP495_RS09565	SM01110	CP495_RS09565
CP495_RS09595	SM00507	HNH nucleases
CP495_RS09645	SM01012	CP495_RS09645
CP495_RS09650	SM00346	helix_turn_helix isocitrate lyase regulation
CP495_RS09700	SM00382	ATPases associated with a variety of cellular activities
CP495_RS09775	SM00382	ATPases associated with a variety of cellular activities
CP495_RS09890	SM00382	ATPases associated with a variety of cellular activities
CP495_RS09900	SM00957	SecA DEAD-like domain
CP495_RS09900	SM00958	SecA preprotein cross-linking domain
CP495_RS09930	SM00240	Forkhead associated domain
CP495_RS09935	SM00422	helix_turn_helix, mercury resistance
CP495_RS09945	SM00422	helix_turn_helix, mercury resistance
CP495_RS09965	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
CP495_RS09970	SM00327	von Willebrand factor (vWF) type A domain
CP495_RS10000	SM00116	Domain in cystathionine beta-synthase and other proteins.
CP495_RS10005	SM01091	Transporter associated domain
CP495_RS10010	SM01240	CP495_RS10010
CP495_RS10015	SM01350	CP495_RS10015
CP495_RS10090	SM00382	ATPases associated with a variety of cellular activities
CP495_RS10200	SM01230	CP495_RS10200
CP495_RS10235	SM00830	Chorismate mutase type II
CP495_RS10275	SM00867	YceI-like domain 
CP495_RS10325	SM00506	Appr-1"-p processing enzyme
CP495_RS10330	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
CP495_RS10335	SM00852	Probable molybdopterin binding domain
CP495_RS10390	SM00829	Enoylreductase
CP495_RS10395	SM00849	Metallo-beta-lactamase superfamily
CP495_RS10435	SM00563	Phosphate acyltransferases
CP495_RS10490	SM00342	helix_turn_helix, arabinose operon control protein
CP495_RS10535	SM00903	Flavin reductase like domain
CP495_RS10565	SM00507	HNH nucleases
CP495_RS10625	SM00530	Helix-turn-helix XRE-family like proteins 
CP495_RS10785	SM01110	CP495_RS10785
CP495_RS10790	SM01152	CP495_RS10790
CP495_RS10805	SM00637	CP495_RS10805
CP495_RS10810	SM00650	Ribosomal RNA adenine dimethylases
CP495_RS10820	SM00953	CP495_RS10820
CP495_RS10860	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CP495_RS10875	SM00831	Cation transporter/ATPase, N-terminus
CP495_RS10980	SM00507	HNH nucleases
CP495_RS10995	SM00530	Helix-turn-helix XRE-family like proteins 
CP495_RS11015	SM00530	Helix-turn-helix XRE-family like proteins 
CP495_RS11035	SM00487	DEAD-like helicases superfamily
CP495_RS11050	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CP495_RS11050	SM00387	Histidine kinase-like ATPases
CP495_RS11085	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CP495_RS11105	SM00382	ATPases associated with a variety of cellular activities
CP495_RS11155	SM00822	CP495_RS11155
CP495_RS11155	SM00823	Phosphopantetheine attachment site
CP495_RS11155	SM00825	Beta-ketoacyl synthase
CP495_RS11155	SM00826	CP495_RS11155
CP495_RS11155	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CP495_RS11155	SM00829	Enoylreductase
CP495_RS11155	SM01294	CP495_RS11155
CP495_RS11360	SM00220	Serine/Threonine protein kinases, catalytic domain
CP495_RS11370	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CP495_RS11370	SM00475	5'-3' exonuclease
CP495_RS11380	SM00487	DEAD-like helicases superfamily
CP495_RS11380	SM00490	helicase superfamily c-terminal domain
CP495_RS11380	SM01142	CP495_RS11380
CP495_RS11415	SM00507	HNH nucleases
CP495_RS11420	SM00487	DEAD-like helicases superfamily
CP495_RS11420	SM00490	helicase superfamily c-terminal domain
CP495_RS11495	SM00382	ATPases associated with a variety of cellular activities
CP495_RS11540	SM01018	B12 binding domain
CP495_RS11565	SM00822	CP495_RS11565
CP495_RS11595	SM00855	Phosphoglycerate mutase family
CP495_RS11685	SM00864	Tubulin/FtsZ family, GTPase domain
CP495_RS11685	SM00865	Tubulin/FtsZ family, C-terminal domain
CP495_RS11815	SM00220	Serine/Threonine protein kinases, catalytic domain
CP495_RS11850	SM00563	Phosphate acyltransferases
CP495_RS11900	SM00465	GIY-YIG type nucleases (URI domain)
CP495_RS11900	SM00479	CP495_RS11900
CP495_RS12005	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
CP495_RS12015	SM00822	CP495_RS12015
CP495_RS12035	SM00729	Elongator protein 3, MiaB family, Radical SAM
CP495_RS12050	SM01230	CP495_RS12050
CP495_RS12060	SM01230	CP495_RS12060
CP495_RS12085	SM00880	CP495_RS12085
CP495_RS12085	SM01118	CP495_RS12085
CP495_RS12100	SM00855	Phosphoglycerate mutase family
CP495_RS12135	SM00226	Low molecular weight phosphatase family
CP495_RS12190	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CP495_RS12200	SM00825	Beta-ketoacyl synthase
CP495_RS12205	SM00825	Beta-ketoacyl synthase
CP495_RS12235	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CP495_RS12280	SM00829	Enoylreductase
CP495_RS12285	SM00849	Metallo-beta-lactamase superfamily
CP495_RS12430	SM00450	Rhodanese Homology Domain
CP495_RS12475	SM00387	Histidine kinase-like ATPases
CP495_RS12480	SM00849	Metallo-beta-lactamase superfamily
CP495_RS12485	SM01110	CP495_RS12485
CP495_RS12655	SM00344	helix_turn_helix ASNC type
CP495_RS12665	SM00382	ATPases associated with a variety of cellular activities
CP495_RS12670	SM00347	helix_turn_helix multiple antibiotic resistance protein
CP495_RS12705	SM00919	Malic enzyme, NAD binding domain
CP495_RS12705	SM01274	CP495_RS12705
CP495_RS12770	SM00400	zinc finger
CP495_RS12770	SM00493	CP495_RS12770
CP495_RS12770	SM00766	DNA primase DnaG DnaB-binding
CP495_RS12775	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CP495_RS12850	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CP495_RS12890	SM00116	Domain in cystathionine beta-synthase and other proteins.
CP495_RS12890	SM01091	Transporter associated domain
CP495_RS12900	SM00322	K homology RNA-binding domain
CP495_RS12925	SM00271	DnaJ molecular chaperone homology domain
CP495_RS12945	SM00923	MbtH-like protein
CP495_RS12955	SM00823	Phosphopantetheine attachment site
CP495_RS12960	SM00823	Phosphopantetheine attachment site
CP495_RS12960	SM01294	CP495_RS12960
CP495_RS12965	SM00822	CP495_RS12965
CP495_RS12965	SM00823	Phosphopantetheine attachment site
CP495_RS12965	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CP495_RS12970	SM00825	Beta-ketoacyl synthase
CP495_RS12975	SM00823	Phosphopantetheine attachment site
CP495_RS13005	SM00729	Elongator protein 3, MiaB family, Radical SAM
CP495_RS13065	SM00382	ATPases associated with a variety of cellular activities
CP495_RS13105	SM00838	Elongation factor G C-terminus
CP495_RS13115	SM00116	Domain in cystathionine beta-synthase and other proteins.
CP495_RS13120	SM00849	Metallo-beta-lactamase superfamily
CP495_RS13140	SM00460	Transglutaminase/protease-like homologues
CP495_RS13170	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CP495_RS13190	SM00855	Phosphoglycerate mutase family
CP495_RS13230	SM00382	ATPases associated with a variety of cellular activities
CP495_RS13280	SM00100	Cyclic nucleotide-monophosphate binding domain
CP495_RS13285	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
CP495_RS13285	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CP495_RS13315	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CP495_RS13345	SM00316	Ribosomal protein S1-like RNA-binding domain
CP495_RS13350	SM00562	CP495_RS13350
CP495_RS13410	SM00382	ATPases associated with a variety of cellular activities
CP495_RS13410	SM00994	ClpX C4-type zinc finger
CP495_RS13410	SM01086	C-terminal, D2-small domain, of ClpB protein
CP495_RS13455	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CP495_RS13455	SM01232	CP495_RS13455
CP495_RS13485	SM00507	HNH nucleases
CP495_RS13495	SM00642	Alpha-amylase domain
CP495_RS13525	SM00382	ATPases associated with a variety of cellular activities
CP495_RS13555	SM00563	Phosphate acyltransferases
CP495_RS13560	SM00563	Phosphate acyltransferases
CP495_RS13590	SM00421	helix_turn_helix, Lux Regulon
CP495_RS13635	SM00861	Transketolase, pyrimidine binding domain
CP495_RS13660	SM00878	Biotin carboxylase C-terminal domain
CP495_RS13670	SM00882	Coenzyme A transferase
CP495_RS13675	SM00882	Coenzyme A transferase
CP495_RS13710	SM00479	CP495_RS13710
CP495_RS13755	SM00530	Helix-turn-helix XRE-family like proteins 
CP495_RS13810	SM00825	Beta-ketoacyl synthase
CP495_RS13810	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CP495_RS13845	SM00891	ERCC4 domain
CP495_RS13875	SM00841	Elongation factor P, C-terminal
CP495_RS13875	SM01185	CP495_RS13875
CP495_RS13990	SM00732	Likely ribonuclease with RNase H fold.
CP495_RS13995	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CP495_RS14015	SM00382	ATPases associated with a variety of cellular activities
CP495_RS14045	SM00100	Cyclic nucleotide-monophosphate binding domain
CP495_RS14045	SM00382	ATPases associated with a variety of cellular activities
CP495_RS14050	SM00100	Cyclic nucleotide-monophosphate binding domain
CP495_RS14055	SM00460	Transglutaminase/protease-like homologues
CP495_RS14070	SM00460	Transglutaminase/protease-like homologues
CP495_RS14115	SM00729	Elongator protein 3, MiaB family, Radical SAM
CP495_RS14130	SM00849	Metallo-beta-lactamase superfamily
CP495_RS14140	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CP495_RS14140	SM00954	Region found in RelA / SpoT proteins
CP495_RS14165	SM01323	CP495_RS14165
CP495_RS14180	SM00823	Phosphopantetheine attachment site
CP495_RS14180	SM01294	CP495_RS14180
CP495_RS14190	SM00382	ATPases associated with a variety of cellular activities
CP495_RS14195	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CP495_RS14205	SM00966	SpoVT / AbrB like domain 
CP495_RS14305	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CP495_RS14370	SM00116	Domain in cystathionine beta-synthase and other proteins.
CP495_RS14445	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CP495_RS14455	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CP495_RS14460	SM00226	Low molecular weight phosphatase family
CP495_RS14685	SM00341	Helicase and RNase D C-terminal
CP495_RS14685	SM00474	3'-5' exonuclease
CP495_RS14690	SM00861	Transketolase, pyrimidine binding domain
CP495_RS14700	SM00116	Domain in cystathionine beta-synthase and other proteins.
CP495_RS14725	SM00382	ATPases associated with a variety of cellular activities
CP495_RS14845	SM00529	Helix-turn-helix diphteria tox regulatory element
CP495_RS14845	SM00899	CP495_RS14845
CP495_RS14955	SM00729	Elongator protein 3, MiaB family, Radical SAM
CP495_RS14980	SM00305	Hint (Hedgehog/Intein) domain C-terminal region
CP495_RS14980	SM00306	Hint (Hedgehog/Intein) domain N-terminal region
CP495_RS14980	SM00382	ATPases associated with a variety of cellular activities
CP495_RS15030	SM00530	Helix-turn-helix XRE-family like proteins 
CP495_RS15045	SM00843	CP495_RS15045
CP495_RS15065	SM00849	Metallo-beta-lactamase superfamily
CP495_RS15070	SM01130	CP495_RS15070
CP495_RS15205	SM00344	helix_turn_helix ASNC type
CP495_RS15210	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CP495_RS15210	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CP495_RS15225	SM00316	Ribosomal protein S1-like RNA-binding domain
CP495_RS15225	SM00322	K homology RNA-binding domain
CP495_RS15235	SM01387	CP495_RS15235
CP495_RS15240	SM00904	Riboflavin kinase
CP495_RS15250	SM00529	Helix-turn-helix diphteria tox regulatory element
CP495_RS15250	SM00899	CP495_RS15250
CP495_RS15270	SM00857	Resolvase, N terminal domain
CP495_RS15310	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
CP495_RS15475	SM00382	ATPases associated with a variety of cellular activities
CP495_RS15520	SM00316	Ribosomal protein S1-like RNA-binding domain
CP495_RS15565	SM00327	von Willebrand factor (vWF) type A domain
CP495_RS15565	SM00382	ATPases associated with a variety of cellular activities
CP495_RS15620	SM01230	CP495_RS15620
CP495_RS15670	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CP495_RS15690	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
CP495_RS15705	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
CP495_RS15750	SM00862	Transcriptional regulatory protein, C terminal
CP495_RS15760	SM00857	Resolvase, N terminal domain
CP495_RS15765	SM00347	helix_turn_helix multiple antibiotic resistance protein
CP495_RS15815	SM00382	ATPases associated with a variety of cellular activities
CP495_RS15910	SM00382	ATPases associated with a variety of cellular activities
CP495_RS15910	SM00962	SRP54-type protein, GTPase domain
CP495_RS15910	SM00963	SRP54-type protein, helical bundle domain
CP495_RS15915	SM00487	DEAD-like helicases superfamily
CP495_RS15920	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CP495_RS15925	SM00938	Nitrogen regulatory protein P-II
CP495_RS15935	SM00382	ATPases associated with a variety of cellular activities
CP495_RS15935	SM00962	SRP54-type protein, GTPase domain
CP495_RS15935	SM00963	SRP54-type protein, helical bundle domain
CP495_RS15940	SM00968	SMC proteins Flexible Hinge Domain
CP495_RS15955	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CP495_RS15955	SM01232	CP495_RS15955
CP495_RS15965	SM00358	Double-stranded RNA binding motif
CP495_RS15965	SM00535	Ribonuclease III family
CP495_RS15980	SM00824	Thioesterase
CP495_RS15995	SM00822	CP495_RS15995
CP495_RS15995	SM00823	Phosphopantetheine attachment site
CP495_RS15995	SM00825	Beta-ketoacyl synthase
CP495_RS15995	SM00826	CP495_RS15995
CP495_RS15995	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CP495_RS15995	SM01294	CP495_RS15995
CP495_RS16000	SM00822	CP495_RS16000
CP495_RS16000	SM00823	Phosphopantetheine attachment site
CP495_RS16000	SM00825	Beta-ketoacyl synthase
CP495_RS16000	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CP495_RS16000	SM01294	CP495_RS16000
CP495_RS16005	SM00822	CP495_RS16005
CP495_RS16005	SM00823	Phosphopantetheine attachment site
CP495_RS16005	SM00825	Beta-ketoacyl synthase
CP495_RS16005	SM00826	CP495_RS16005
CP495_RS16005	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CP495_RS16005	SM00829	Enoylreductase
CP495_RS16010	SM00822	CP495_RS16010
CP495_RS16010	SM00823	Phosphopantetheine attachment site
CP495_RS16010	SM00825	Beta-ketoacyl synthase
CP495_RS16010	SM00826	CP495_RS16010
CP495_RS16010	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CP495_RS16015	SM00823	Phosphopantetheine attachment site
CP495_RS16015	SM00825	Beta-ketoacyl synthase
CP495_RS16015	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CP495_RS16020	SM00382	ATPases associated with a variety of cellular activities
CP495_RS16040	SM00822	CP495_RS16040
CP495_RS16040	SM00823	Phosphopantetheine attachment site
CP495_RS16040	SM00825	Beta-ketoacyl synthase
CP495_RS16040	SM00826	CP495_RS16040
CP495_RS16040	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CP495_RS16040	SM00829	Enoylreductase
CP495_RS16075	SM00822	CP495_RS16075
CP495_RS16075	SM00823	Phosphopantetheine attachment site
CP495_RS16075	SM00826	CP495_RS16075
CP495_RS16075	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CP495_RS16075	SM00829	Enoylreductase
CP495_RS16075	SM01294	CP495_RS16075
CP495_RS16080	SM00825	Beta-ketoacyl synthase
CP495_RS16085	SM00823	Phosphopantetheine attachment site
CP495_RS16200	SM00878	Biotin carboxylase C-terminal domain
CP495_RS16205	SM00756	CP495_RS16205
CP495_RS16235	SM00487	DEAD-like helicases superfamily
CP495_RS16235	SM00490	helicase superfamily c-terminal domain
CP495_RS16240	SM01120	CP495_RS16240
CP495_RS16240	SM01121	CP495_RS16240
CP495_RS16255	SM00986	Uracil DNA glycosylase superfamily
CP495_RS16255	SM00987	UreE urease accessory protein, C-terminal domain 
CP495_RS16270	SM00857	Resolvase, N terminal domain
CP495_RS16300	SM00855	Phosphoglycerate mutase family
CP495_RS16305	SM00411	bacterial (prokaryotic) histone like domain
CP495_RS16320	SM00346	helix_turn_helix isocitrate lyase regulation
CP495_RS16360	SM01329	CP495_RS16360
CP495_RS16385	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CP495_RS16430	SM00903	Flavin reductase like domain
CP495_RS16440	SM00845	GatB domain
CP495_RS16465	SM00292	breast cancer carboxy-terminal domain
CP495_RS16465	SM00532	Ligase N family
CP495_RS16535	SM00563	Phosphate acyltransferases
CP495_RS16545	SM00893	Electron transfer flavoprotein domain
CP495_RS16550	SM00893	Electron transfer flavoprotein domain
CP495_RS16615	SM00382	ATPases associated with a variety of cellular activities
CP495_RS16640	SM00829	Enoylreductase
CP495_RS16705	SM00822	CP495_RS16705
CP495_RS16725	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CP495_RS16725	SM00895	CP495_RS16725
CP495_RS16800	SM00507	HNH nucleases
CP495_RS16830	SM00220	Serine/Threonine protein kinases, catalytic domain
CP495_RS16840	SM00342	helix_turn_helix, arabinose operon control protein
CP495_RS16855	SM00822	CP495_RS16855
CP495_RS16860	SM00829	Enoylreductase
CP495_RS16960	SM00382	ATPases associated with a variety of cellular activities
CP495_RS16975	SM00937	CP495_RS16975
CP495_RS16995	SM00729	Elongator protein 3, MiaB family, Radical SAM
CP495_RS17035	SM00450	Rhodanese Homology Domain
CP495_RS17040	SM00450	Rhodanese Homology Domain
CP495_RS17080	SM00862	Transcriptional regulatory protein, C terminal
CP495_RS17080	SM01043	Bacterial transcriptional activator domain
CP495_RS17125	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CP495_RS17125	SM00387	Histidine kinase-like ATPases
CP495_RS17130	SM00421	helix_turn_helix, Lux Regulon
CP495_RS17130	SM00448	cheY-homologous receiver domain
CP495_RS17185	SM00829	Enoylreductase
CP495_RS17195	SM00448	cheY-homologous receiver domain
CP495_RS17230	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
CP495_RS17235	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CP495_RS17235	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
CP495_RS17405	SM00530	Helix-turn-helix XRE-family like proteins 
CP495_RS17425	SM00953	CP495_RS17425
CP495_RS17505	SM00341	Helicase and RNase D C-terminal
CP495_RS17555	SM00450	Rhodanese Homology Domain
CP495_RS17560	SM00235	Zinc-dependent metalloprotease
CP495_RS17585	SM00487	DEAD-like helicases superfamily
CP495_RS17585	SM00490	helicase superfamily c-terminal domain
CP495_RS17600	SM00855	Phosphoglycerate mutase family
CP495_RS17620	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CP495_RS17630	SM00387	Histidine kinase-like ATPases
CP495_RS17745	SM00100	Cyclic nucleotide-monophosphate binding domain
CP495_RS17750	SM00957	SecA DEAD-like domain
CP495_RS17750	SM00958	SecA preprotein cross-linking domain
CP495_RS17770	SM00909	Sporulation and spore germination
CP495_RS17775	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CP495_RS17775	SM00387	Histidine kinase-like ATPases
CP495_RS17775	SM00388	His Kinase A (phosphoacceptor) domain
CP495_RS17780	SM00448	cheY-homologous receiver domain
CP495_RS17780	SM00862	Transcriptional regulatory protein, C terminal
CP495_RS17790	SM00996	S-adenosyl-L-homocysteine hydrolase
CP495_RS17790	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
CP495_RS17925	SM00947	Carbonic anhydrase
CP495_RS17935	SM01001	AIR carboxylase
CP495_RS17940	SM01209	CP495_RS17940
CP495_RS17975	SM00450	Rhodanese Homology Domain
CP495_RS17985	SM00878	Biotin carboxylase C-terminal domain
CP495_RS18015	SM00344	helix_turn_helix ASNC type
CP495_RS18020	SM01150	CP495_RS18020
CP495_RS18040	SM00382	ATPases associated with a variety of cellular activities
CP495_RS18040	SM00487	DEAD-like helicases superfamily
CP495_RS18040	SM00490	helicase superfamily c-terminal domain
CP495_RS18045	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CP495_RS18045	SM01232	CP495_RS18045
CP495_RS18140	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
CP495_RS18245	SM00422	helix_turn_helix, mercury resistance
CP495_RS18265	SM01329	CP495_RS18265
CP495_RS18385	SM00240	Forkhead associated domain
CP495_RS18405	SM00960	Roadblock/LC7 domain
CP495_RS18410	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CP495_RS18410	SM00387	Histidine kinase-like ATPases
CP495_RS18435	SM00481	DNA polymerase alpha chain like domain
CP495_RS18485	SM00861	Transketolase, pyrimidine binding domain
CP495_RS18535	SM00855	Phosphoglycerate mutase family
CP495_RS18540	SM00822	CP495_RS18540
CP495_RS18645	SM01240	CP495_RS18645
CP495_RS18650	SM00116	Domain in cystathionine beta-synthase and other proteins.
CP495_RS18650	SM01240	CP495_RS18650
CP495_RS18685	SM00883	Chaperonin 10 Kd subunit
CP495_RS18710	SM01005	Alanine racemase, C-terminal domain
CP495_RS18735	SM00382	ATPases associated with a variety of cellular activities
CP495_RS18845	SM00382	ATPases associated with a variety of cellular activities
CP495_RS18865	SM01110	CP495_RS18865
CP495_RS18870	SM01110	CP495_RS18870
CP495_RS18900	SM00662	RNA polymerases D
CP495_RS18905	SM00363	S4 RNA-binding domain
CP495_RS18905	SM01390	CP495_RS18905
CP495_RS18975	SM00835	Cupin
CP495_RS19040	SM00822	CP495_RS19040
CP495_RS19130	SM00822	CP495_RS19130
CP495_RS19305	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CP495_RS19370	SM00822	CP495_RS19370
CP495_RS19390	SM00882	Coenzyme A transferase
CP495_RS19395	SM00882	Coenzyme A transferase
CP495_RS19400	SM01240	CP495_RS19400
CP495_RS19480	SM00903	Flavin reductase like domain
CP495_RS19520	SM00354	helix_turn _helix lactose operon repressor
CP495_RS19540	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CP495_RS19545	SM00840	CP495_RS19545
CP495_RS19560	SM01058	CarD-like/TRCF domain
CP495_RS19570	SM00382	ATPases associated with a variety of cellular activities
CP495_RS19585	SM00947	Carbonic anhydrase
CP495_RS19590	SM00478	endonuclease III
CP495_RS19590	SM00525	CP495_RS19590
CP495_RS19615	SM00644	CP495_RS19615
CP495_RS19625	SM00382	ATPases associated with a variety of cellular activities
CP495_RS19625	SM01086	C-terminal, D2-small domain, of ClpB protein
CP495_RS19675	SM00905	Dihydroneopterin aldolase
CP495_RS19690	SM00382	ATPases associated with a variety of cellular activities
CP495_RS19870	SM00382	ATPases associated with a variety of cellular activities
CP495_RS19875	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
CP495_RS19875	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CP495_RS19880	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CP495_RS19880	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CP495_RS19880	SM00493	CP495_RS19880
CP495_RS19890	SM00357	Cold shock protein domain
CP495_RS19895	SM00487	DEAD-like helicases superfamily
CP495_RS19895	SM00490	helicase superfamily c-terminal domain
CP495_RS19980	SM00382	ATPases associated with a variety of cellular activities
CP495_RS20040	SM00478	endonuclease III
CP495_RS20040	SM00525	CP495_RS20040
CP495_RS20050	SM00100	Cyclic nucleotide-monophosphate binding domain
CP495_RS20050	SM00419	helix_turn_helix, cAMP Regulatory protein
CP495_RS20055	SM00849	Metallo-beta-lactamase superfamily
CP495_RS20085	SM00740	CP495_RS20085
CP495_RS20240	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CP495_RS20250	SM00917	LeuA allosteric (dimerisation) domain
CP495_RS20255	SM00479	CP495_RS20255
CP495_RS20275	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CP495_RS20275	SM00493	CP495_RS20275
CP495_RS20285	SM00646	CP495_RS20285
CP495_RS20305	SM00382	ATPases associated with a variety of cellular activities
CP495_RS20350	SM00100	Cyclic nucleotide-monophosphate binding domain
CP495_RS20390	SM00342	helix_turn_helix, arabinose operon control protein
CP495_RS20425	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CP495_RS20505	SM00382	ATPases associated with a variety of cellular activities
CP495_RS20525	SM00849	Metallo-beta-lactamase superfamily
CP495_RS20535	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CP495_RS20535	SM00387	Histidine kinase-like ATPases
CP495_RS20535	SM00388	His Kinase A (phosphoacceptor) domain
CP495_RS20540	SM00448	cheY-homologous receiver domain
CP495_RS20540	SM00862	Transcriptional regulatory protein, C terminal
CP495_RS20620	SM00829	Enoylreductase
CP495_RS20640	SM00382	ATPases associated with a variety of cellular activities
CP495_RS20735	SM00823	Phosphopantetheine attachment site
CP495_RS20735	SM00825	Beta-ketoacyl synthase
CP495_RS20735	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CP495_RS20745	SM01110	CP495_RS20745
CP495_RS20770	SM00014	Acid phosphatase homologues
CP495_RS20790	SM00701	Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme.
CP495_RS20815	SM00563	Phosphate acyltransferases
CP495_RS20820	SM00563	Phosphate acyltransferases
CP495_RS20825	SM00563	Phosphate acyltransferases
CP495_RS20870	SM00822	CP495_RS20870
CP495_RS20870	SM00823	Phosphopantetheine attachment site
CP495_RS20870	SM00825	Beta-ketoacyl synthase
CP495_RS20870	SM00826	CP495_RS20870
CP495_RS20870	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CP495_RS20870	SM00829	Enoylreductase
CP495_RS20890	SM00857	Resolvase, N terminal domain
CP495_RS20915	SM00342	helix_turn_helix, arabinose operon control protein
CP495_RS20940	SM00855	Phosphoglycerate mutase family
CP495_RS21060	SM00481	DNA polymerase alpha chain like domain
CP495_RS21125	SM00382	ATPases associated with a variety of cellular activities
CP495_RS21145	SM00382	ATPases associated with a variety of cellular activities
CP495_RS21210	SM00382	ATPases associated with a variety of cellular activities
CP495_RS21325	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CP495_RS21370	SM00646	CP495_RS21370
CP495_RS21385	SM00470	ParB-like nuclease domain
CP495_RS21400	SM00393	Putative single-stranded nucleic acids-binding domain
CP495_RS21410	SM01234	CP495_RS21410
