locus-tag	class	description
MAB_0002	COG0592	DNA-directed DNA polymerase activity
MAB_0003	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
MAB_0004	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
MAB_0005	COG5512	Zn-ribbon-containing possibly RNA-binding protein and truncated derivatives
MAB_0006	COG0187	DNA topoisomerase II activity
MAB_0022c	COG2814	Major facilitator Superfamily
MAB_0023	COG0583	DNA-binding transcription factor activity
MAB_0026	COG0705	Rhomboid family
MAB_0026	COG0457	Tetratricopeptide repeat
MAB_0033c	COG0515	serine threonine protein kinase
MAB_0033c	COG2815	serine threonine protein kinase
MAB_0034c	COG0515	serine threonine protein kinase
MAB_0035c	COG0768	penicillin binding
MAB_0038c	COG1716	ATPase activity
MAB_0039c	COG1716	ATPase activity
MAB_0043	COG0754	glutathionylspermidine amidase activity
MAB_0045	COG1309	transcriptional regulator
MAB_0049	COG4842	Belongs to the WXG100 family
MAB_0053c	COG0590	tRNA wobble adenosine to inosine editing
MAB_0055c	COG0583	DNA-binding transcription factor activity
MAB_0056c	COG1643	Atp-dependent helicase
MAB_0057	COG1028	Short-chain dehydrogenase reductase Sdr
MAB_0061	COG4585	Histidine kinase
MAB_0065c	COG1960	acyl-CoA dehydrogenase activity
MAB_0074c	COG2072	flavoprotein involved in K transport
MAB_0076	COG0346	lactoylglutathione lyase activity
MAB_0077	COG1414	Transcriptional regulator
MAB_0081	COG1053	succinate dehydrogenase
MAB_0087c	COG1785	Belongs to the alkaline phosphatase family
MAB_0091	COG0067	glutamate synthase
MAB_0091	COG0069	glutamate synthase activity
MAB_0091	COG0070	glutamate synthase
MAB_0097	COG1796	DNA polymerase
MAB_0097	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
MAB_0099	COG2072	flavoprotein involved in K transport
MAB_0101	COG2124	cytochrome p450
MAB_0104	COG1024	Enoyl-CoA hydratase
MAB_0109c	COG2372	response to copper ion
MAB_0120	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
MAB_0124	COG5002	protein histidine kinase activity
MAB_0124	COG5001	Diguanylate cyclase
MAB_0124	COG3447	MASE1 domain protein
MAB_0126c	COG1528	Iron-storage protein
MAB_0127c	COG1528	Iron-storage protein
MAB_0128c	COG1316	TRANSCRIPTIONal
MAB_0133	COG0406	alpha-ribazole phosphatase activity
MAB_0134c	COG0028	Belongs to the TPP enzyme family
MAB_0140c	COG2072	flavoprotein involved in K transport
MAB_0142c	COG2072	flavoprotein involved in K transport
MAB_0146	COG1285	pathogenesis
MAB_0156c	COG2146	nitrite reductase [NAD(P)H] activity
MAB_0156c	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
MAB_0158c	COG4133	protoheme IX ABC transporter activity
MAB_0159	COG2070	2-Nitropropane dioxygenase
MAB_0160	COG1942	4-Oxalocrotonate Tautomerase
MAB_0161	COG0583	DNA-binding transcription factor activity
MAB_0164	COG1028	Short-chain dehydrogenase reductase Sdr
MAB_0167	COG0561	phosphatase activity
MAB_0171	COG1216	Glycosyl transferase, family 2
MAB_0172	COG0671	phosphoesterase, PA-phosphatase related
MAB_0173	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
MAB_0174	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
MAB_0178	COG4223	transferase activity, transferring acyl groups other than amino-acyl groups
MAB_0179	COG0318	PFAM AMP-dependent synthetase and ligase
MAB_0180	COG3321	synthase
MAB_0180	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
MAB_0180	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
MAB_0181	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
MAB_0191c	COG1028	Short-chain dehydrogenase reductase Sdr
MAB_0192c	COG0277	FAD linked oxidase domain protein
MAB_0194	COG2376	Dihydroxyacetone kinase
MAB_0195c	COG2267	carboxylic ester hydrolase activity
MAB_0196c	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
MAB_0197	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
MAB_0200c	COG0671	phosphoesterase, PA-phosphatase related
MAB_0202c	COG1216	Glycosyl transferase, family 2
MAB_0217c	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
MAB_0218c	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
MAB_0240	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
MAB_0255	COG1960	acyl-CoA dehydrogenase activity
MAB_0259c	COG1028	Short-chain dehydrogenase reductase Sdr
MAB_0263	COG1174	glycine betaine transport
MAB_0266c	COG0287	Prephenate dehydrogenase
MAB_0268	COG0590	tRNA wobble adenosine to inosine editing
MAB_0275	COG0343	queuine tRNA-ribosyltransferase activity
MAB_0277c	COG0765	amino acid transport
MAB_0278c	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
MAB_0279c	COG1793	dna ligase
MAB_0284c	COG2271	Major facilitator Superfamily
MAB_0285	COG2130	NADP-dependent
MAB_0290	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
MAB_0296	COG1028	Short-chain dehydrogenase reductase Sdr
MAB_0305	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
MAB_0310c	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
MAB_0312c	COG0148	phosphopyruvate hydratase activity
MAB_0318c	COG0860	N-Acetylmuramoyl-L-alanine amidase
MAB_0323c	COG1492	cobalamin metabolic process
MAB_0328	COG1960	acyl-CoA dehydrogenase activity
MAB_0331c	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
MAB_0337c	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
MAB_0347	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
MAB_0349c	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
MAB_0354c	COG2070	2-Nitropropane dioxygenase
MAB_0363c	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
MAB_0364c	COG2971	BadF BadG BcrA BcrD
MAB_0365c	COG2814	Major facilitator Superfamily
MAB_0369	COG3572	ergothioneine biosynthetic process
MAB_0370	COG1262	PFAM Formylglycine-generating sulfatase enzyme
MAB_0371	COG0121	glutamine amidotransferase
MAB_0372	COG4301	Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine
MAB_0373	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
MAB_0378	COG0183	Belongs to the thiolase family
MAB_0379	COG2030	dehydratase
MAB_0380	COG1028	Short-chain dehydrogenase reductase Sdr
MAB_0381	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
MAB_0383c	COG1695	Transcriptional regulator
MAB_0385	COG0569	domain protein
MAB_0385	COG0475	glutathione-regulated potassium exporter activity
MAB_0389c	COG0714	Associated with various cellular activities
MAB_0398c	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
MAB_0399c	COG1074	ATP-dependent DNA helicase activity
MAB_0400c	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
MAB_0402	COG2755	lipolytic protein G-D-S-L family
MAB_0406c	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
MAB_0407c	COG1408	metallophosphoesterase
MAB_0408c	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
MAB_0414	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
MAB_0422c	COG2945	thiolester hydrolase activity
MAB_0422c	COG0596	Alpha beta hydrolase
MAB_0425c	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
MAB_0426	COG0747	negative chemotaxis
MAB_0428	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
MAB_0442	COG0582	viral genome integration into host DNA
MAB_0449	COG2217	Heavy metal translocating P-type atpase
MAB_0451c	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
MAB_0463c	COG2132	Multicopper oxidase
MAB_0470c	COG0596	Alpha beta hydrolase
MAB_0482c	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
MAB_0483c	COG1309	transcriptional regulator
MAB_0484	COG0657	acetylesterase activity
MAB_0485	COG1902	pentaerythritol trinitrate reductase activity
MAB_0486c	COG1205	dead DEAH box helicase
MAB_0486c	COG1111	helicase
MAB_0487	COG1278	Cold shock
MAB_0489	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
MAB_0489	COG1754	DNA topoisomerase type I activity
MAB_0491	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
MAB_0512	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
MAB_0519	COG2027	D-alanyl-D-alanine carboxypeptidase
MAB_0526c	COG1063	alcohol dehydrogenase
MAB_0528c	COG2267	carboxylic ester hydrolase activity
MAB_0530	COG1309	transcriptional regulator
MAB_0533	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
MAB_0542	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
MAB_0544	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
MAB_0548c	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
MAB_0549c	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
MAB_0557	COG4977	sequence-specific DNA binding
MAB_0558c	COG1194	a g-specific adenine glycosylase
MAB_0560	COG1316	TRANSCRIPTIONal
MAB_0562c	COG1623	Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c- di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation
MAB_0564c	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
MAB_0568	COG1329	Transcriptional regulator
MAB_0569	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
MAB_0571	COG0215	cysteine-tRNA ligase activity
MAB_0573	COG0584	glycerophosphoryl diester phosphodiesterase
MAB_0575c	COG1108	ABC-type Mn2 Zn2 transport systems permease components
MAB_0576c	COG1120	ATPase activity
MAB_0577c	COG0803	Belongs to the bacterial solute-binding protein 9 family
MAB_0579c	COG1309	transcriptional regulator
MAB_0580	COG1960	acyl-CoA dehydrogenase activity
MAB_0583c	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
MAB_0585	COG0346	lactoylglutathione lyase activity
MAB_0593c	COG1960	acyl-CoA dehydrogenase activity
MAB_0594c	COG1960	acyl-CoA dehydrogenase activity
MAB_0595c	COG1960	acyl-CoA dehydrogenase activity
MAB_0596c	COG0318	PFAM AMP-dependent synthetase and ligase
MAB_0597	COG1960	acyl-CoA dehydrogenase activity
MAB_0600	COG0183	Belongs to the thiolase family
MAB_0606c	COG1024	Enoyl-CoA hydratase
MAB_0607	COG1028	Short-chain dehydrogenase reductase Sdr
MAB_0608	COG1028	Short-chain dehydrogenase reductase Sdr
MAB_0612c	COG0183	Belongs to the thiolase family
MAB_0614	COG1960	acyl-CoA dehydrogenase activity
MAB_0615	COG1960	acyl-CoA dehydrogenase activity
MAB_0616	COG2030	dehydratase
MAB_0621c	COG2030	dehydratase
MAB_0622c	COG1053	succinate dehydrogenase
MAB_0624	COG3971	2-oxopent-4-enoate hydratase activity
MAB_0634c	COG0651	ATP synthesis coupled electron transport
MAB_0636c	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
MAB_0636c	COG2111	Na H antiporter
MAB_0637c	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
MAB_0641	COG0647	UMP catabolic process
MAB_0646c	COG4221	oxidoreductase activity
MAB_0650	COG0459	protein refolding
MAB_0653	COG0714	Associated with various cellular activities
MAB_0663	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
MAB_0666	COG4842	Belongs to the WXG100 family
MAB_0673	COG0745	RESPONSE REGULATOR receiver
MAB_0674	COG5002	protein histidine kinase activity
MAB_0674	COG5000	phosphorelay sensor kinase activity
MAB_0676c	COG0537	adenosine 5'-monophosphoramidase activity
MAB_0677c	COG0697	spore germination
MAB_0679c	COG0596	Alpha beta hydrolase
MAB_0685	COG0436	Aminotransferase
MAB_0687	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
MAB_0692c	COG0477	Major facilitator Superfamily
MAB_0693	COG0386	Belongs to the glutathione peroxidase family
MAB_0695	COG3573	Dehydrogenase
MAB_0697	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
MAB_0700c	COG2837	iron assimilation
MAB_0701	COG1362	aminopeptidase activity
MAB_0718c	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
MAB_0720	COG0601	transmembrane transport
MAB_0721	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
MAB_0722	COG4172	Belongs to the ABC transporter superfamily
MAB_0728	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
MAB_0730c	COG0354	folic acid binding
MAB_0740c	COG2897	thiosulfate sulfurtransferase activity
MAB_0744	COG0745	RESPONSE REGULATOR receiver
MAB_0748	COG0581	inorganic phosphate transmembrane transporter activity
MAB_0749	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
MAB_0750	COG0604	alcohol dehydrogenase
MAB_0761c	COG1250	3-hydroxyacyl-CoA dehydrogenase
MAB_0766	COG0697	spore germination
MAB_0770	COG0442	prolyl-tRNA aminoacylation
MAB_0771c	COG2814	Major facilitator Superfamily
MAB_0809c	COG5651	PPE family
MAB_0810c	COG0436	Aminotransferase
MAB_0815	COG0531	amino acid
MAB_0816	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
MAB_0817	COG1012	belongs to the aldehyde dehydrogenase family
MAB_0819	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
MAB_0820c	COG2902	Dehydrogenase
MAB_0821	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
MAB_0822	COG1960	acyl-CoA dehydrogenase activity
MAB_0823	COG1012	belongs to the aldehyde dehydrogenase family
MAB_0824	COG1804	L-carnitine dehydratase bile acid-inducible protein F
MAB_0826c	COG0657	acetylesterase activity
MAB_0827	COG1028	Short-chain dehydrogenase reductase Sdr
MAB_0829	COG1902	pentaerythritol trinitrate reductase activity
MAB_0830	COG1902	pentaerythritol trinitrate reductase activity
MAB_0833	COG1028	Short-chain dehydrogenase reductase Sdr
MAB_0836c	COG1024	Enoyl-CoA hydratase
MAB_0845	COG1804	L-carnitine dehydratase bile acid-inducible protein F
MAB_0846	COG0657	acetylesterase activity
MAB_0850	COG0183	Belongs to the thiolase family
MAB_0853	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
MAB_0857	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
MAB_0860c	COG1061	Type III restriction enzyme res subunit
MAB_0868c	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
MAB_0872	COG1278	Cold shock
MAB_0880	COG2814	Major facilitator Superfamily
MAB_0893	COG3185	4-Hydroxyphenylpyruvate dioxygenase
MAB_0894c	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
MAB_0900c	COG2030	dehydratase
MAB_0900c	COG1012	belongs to the aldehyde dehydrogenase family
MAB_0901c	COG1309	transcriptional regulator
MAB_0903	COG1024	Enoyl-CoA hydratase
MAB_0904	COG1250	3-hydroxyacyl-CoA dehydrogenase
MAB_0906	COG3396	Phenylacetate-CoA oxygenase
MAB_0907	COG3460	Phenylacetate-CoA oxygenase
MAB_0908	COG3396	Phenylacetate-CoA oxygenase
MAB_0909	COG2151	metal-sulfur cluster biosynthetic enzyme
MAB_0910	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
MAB_0915c	COG0179	Fumarylacetoacetate (FAA) hydrolase
MAB_0917c	COG2124	cytochrome p450
MAB_0924c	COG1764	response to oxidative stress
MAB_0925c	COG1846	Transcriptional regulator
MAB_0926	COG1216	Glycosyl transferase, family 2
MAB_0927	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
MAB_0933	COG0259	pyridoxamine-phosphate oxidase activity
MAB_0935c	COG0318	PFAM AMP-dependent synthetase and ligase
MAB_0936c	COG5651	PPE family
MAB_0937c	COG2409	Drug exporters of the RND superfamily
MAB_0942	COG4977	sequence-specific DNA binding
MAB_0946	COG1846	Transcriptional regulator
MAB_0947c	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
MAB_0949c	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
MAB_0950c	COG0833	amino acid
MAB_0953	COG2186	Transcriptional regulator
MAB_0954	COG0545	Peptidyl-prolyl cis-trans isomerase
MAB_0962	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
MAB_0963c	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
MAB_0972	COG1012	belongs to the aldehyde dehydrogenase family
MAB_0975c	COG3022	response to hydroperoxide
MAB_0977c	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
MAB_0984c	COG1309	transcriptional regulator
MAB_0992	COG1393	Belongs to the ArsC family
MAB_0993c	COG0583	DNA-binding transcription factor activity
MAB_1002	COG0183	Belongs to the thiolase family
MAB_1011c	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
MAB_1019c	COG0438	transferase activity, transferring glycosyl groups
MAB_1020	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
MAB_1022	COG2382	esterase
MAB_1028c	COG1513	Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide
MAB_1029c	COG1846	Transcriptional regulator
MAB_1038	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
MAB_1040	COG2326	polyphosphate kinase activity
MAB_1043c	COG2084	Dehydrogenase
MAB_1046c	COG0523	cobalamin synthesis protein
MAB_1047c	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
MAB_1048c	COG0235	Class ii aldolase
MAB_1049	COG1396	sequence-specific DNA binding
MAB_1050c	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
MAB_1051c	COG0166	Belongs to the GPI family
MAB_1072c	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
MAB_1078	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
MAB_1079	COG0521	Mo-molybdopterin cofactor biosynthetic process
MAB_1079	COG0315	cyclic pyranopterin monophosphate synthase activity
MAB_1085c	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
MAB_1086	COG1210	Utp--glucose-1-phosphate uridylyltransferase
MAB_1093c	COG1104	cysteine desulfurase activity
MAB_1121	COG2235	arginine
MAB_1124c	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
MAB_1127c	COG1252	NADH dehydrogenase
MAB_1129	COG0084	hydrolase, TatD family'
MAB_1130	COG3583	domain protein
MAB_1133c	COG2815	serine threonine protein kinase
MAB_1133c	COG0515	serine threonine protein kinase
MAB_1137c	COG2409	Drug exporters of the RND superfamily
MAB_1138c	COG0456	acetyltransferase
MAB_1138c	COG1846	Transcriptional regulator
MAB_1139	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
MAB_1140	COG0318	PFAM AMP-dependent synthetase and ligase
MAB_1143c	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
MAB_1149	COG1309	transcriptional regulator
MAB_1158	COG3956	TIGRFAM MazG family protein
MAB_1161c	COG2837	iron assimilation
MAB_1162c	COG2822	iron ion transport
MAB_1169	COG0596	Alpha beta hydrolase
MAB_1174c	COG0318	PFAM AMP-dependent synthetase and ligase
MAB_1175	COG0427	acetyl-CoA hydrolase
MAB_1184c	COG1846	Transcriptional regulator
MAB_1187c	COG1024	Enoyl-CoA hydratase
MAB_1192c	COG0183	Belongs to the thiolase family
MAB_1193c	COG2755	lipolytic protein G-D-S-L family
MAB_1194	COG0657	acetylesterase activity
MAB_1196	COG1714	RDD family
MAB_1199	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
MAB_1203	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
MAB_1205	COG1331	Highly conserved protein containing a thioredoxin domain
MAB_1206	COG3631	Ketosteroid isomerase-related protein
MAB_1209	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
MAB_1210c	COG1028	Short-chain dehydrogenase reductase Sdr
MAB_1211c	COG2124	cytochrome p450
MAB_1215c	COG1028	Short-chain dehydrogenase reductase Sdr
MAB_1223	COG2272	Belongs to the type-B carboxylesterase lipase family
MAB_1225	COG1174	glycine betaine transport
MAB_1227	COG1174	glycine betaine transport
MAB_1236	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
MAB_1239	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
MAB_1240	COG0726	polysaccharide deacetylase
MAB_1255c	COG1570	exodeoxyribonuclease VII activity
MAB_1257	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
MAB_1260c	COG1966	Carbon starvation protein
MAB_1265c	COG3189	MarR family transcriptional regulator
MAB_1266	COG0012	GTP binding
MAB_1271c	COG2132	Multicopper oxidase
MAB_1273	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
MAB_1275	COG0488	(ABC) transporter
MAB_1287	COG2409	Drug exporters of the RND superfamily
MAB_1294c	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
MAB_1298c	COG1716	ATPase activity
MAB_1304	COG1051	belongs to the nudix hydrolase family
MAB_1310	COG1217	gtp-binding protein TYPA
MAB_1312	COG2015	COG2015, Alkyl sulfatase and related hydrolases
MAB_1313	COG2207	Transcriptional regulator
MAB_1313	COG1609	Transcriptional regulator
MAB_1325c	COG1902	pentaerythritol trinitrate reductase activity
MAB_1325c	COG0446	pyridine nucleotide-disulphide oxidoreductase
MAB_1327	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
MAB_1329	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
MAB_1330	COG1012	belongs to the aldehyde dehydrogenase family
MAB_1331	COG0506	proline dehydrogenase activity
MAB_1332	COG0318	PFAM AMP-dependent synthetase and ligase
MAB_1337c	COG2207	Transcriptional regulator
MAB_1340	COG1611	Belongs to the LOG family
MAB_1341	COG1611	Belongs to the LOG family
MAB_1342	COG0318	PFAM AMP-dependent synthetase and ligase
MAB_1344c	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
MAB_1346	COG0463	Glycosyl transferase, family 2
MAB_1349	COG0519	Catalyzes the synthesis of GMP from XMP
MAB_1351c	COG0297	glycogen (starch) synthase activity
MAB_1358c	COG3559	Exporter of polyketide antibiotics
MAB_1359c	COG1131	(ABC) transporter
MAB_1360c	COG1309	transcriptional regulator
MAB_1362	COG1595	DNA-templated transcription, initiation
MAB_1363	COG5662	AntiSigma factor
MAB_1364	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
MAB_1378c	COG0598	Magnesium transport protein CorA
MAB_1379c	COG1309	transcriptional regulator
MAB_1383	COG2095	MarC family integral membrane protein
MAB_1386	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
MAB_1387	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
MAB_1391	COG3835	regulator
MAB_1392c	COG1073	alpha beta
MAB_1393c	COG0567	Dehydrogenase, E1 component
MAB_1393c	COG0508	dehydrogenase complex catalyzes the overall conversion of
MAB_1395	COG2814	Major facilitator Superfamily
MAB_1407c	COG0277	FAD linked oxidase domain protein
MAB_1408c	COG1028	Short-chain dehydrogenase reductase Sdr
MAB_1411	COG0668	transmembrane transport
MAB_1429	COG2814	Major facilitator Superfamily
MAB_1434	COG0019	diaminopimelate decarboxylase activity
MAB_1435	COG0460	homoserine dehydrogenase
MAB_1436	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
MAB_1443	COG2890	protein-(glutamine-N5) methyltransferase activity
MAB_1445	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
MAB_1447	COG0356	it plays a direct role in the translocation of protons across the membrane
MAB_1448	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
MAB_1453	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
MAB_1462c	COG0346	lactoylglutathione lyase activity
MAB_1463	COG0183	Belongs to the thiolase family
MAB_1464	COG2409	Drug exporters of the RND superfamily
MAB_1467c	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
MAB_1468c	COG0366	Alpha amylase catalytic
MAB_1469	COG0058	SHG alpha-glucan phosphorylase activity
MAB_1472c	COG1335	isochorismatase
MAB_1474c	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
MAB_1477	COG3191	aminopeptidase activity
MAB_1486c	COG0604	alcohol dehydrogenase
MAB_1489	COG0318	PFAM AMP-dependent synthetase and ligase
MAB_1492	COG0419	ATPase involved in DNA repair
MAB_1493c	COG1024	Enoyl-CoA hydratase
MAB_1495	COG0243	molybdopterin cofactor binding
MAB_1498c	COG2188	Transcriptional regulator
MAB_1510	COG0596	Alpha beta hydrolase
MAB_1511	COG3757	hydrolase, family 25
MAB_1514	COG1051	belongs to the nudix hydrolase family
MAB_1518	COG1309	transcriptional regulator
MAB_1521	COG4585	Histidine kinase
MAB_1522	COG2197	response regulator
MAB_1524c	COG2239	Acts as a magnesium transporter
MAB_1526	COG0300	oxidoreductase activity
MAB_1528c	COG0656	L-ascorbic acid biosynthetic process
MAB_1530	COG1376	ErfK ybiS ycfS ynhG family protein
MAB_1533c	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
MAB_1534	COG0433	COG0433 Predicted ATPase
MAB_1537c	COG0300	oxidoreductase activity
MAB_1540	COG1301	dicarboxylic acid transport
MAB_1542c	COG0531	amino acid
MAB_1546c	COG4424	Sulfotransferase
MAB_1547c	COG3119	arylsulfatase activity
MAB_1554	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
MAB_1554	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
MAB_1561	COG2902	Dehydrogenase
MAB_1562	COG0824	Thioesterase
MAB_1565c	COG0366	Alpha amylase catalytic
MAB_1572	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
MAB_1576	COG1309	transcriptional regulator
MAB_1579	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
MAB_1581	COG0740	serine-type endopeptidase activity
MAB_1582	COG0740	serine-type endopeptidase activity
MAB_1592c	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
MAB_1594	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
MAB_1594	COG0674	pyruvate-flavodoxin oxidoreductase activity
MAB_1595	COG1013	pyruvate-flavodoxin oxidoreductase activity
MAB_1597	COG1388	LysM domain
MAB_1603	COG0525	valine-tRNA ligase activity
MAB_1604	COG0285	dihydrofolate synthase activity
MAB_1607	COG1530	ribonuclease E activity
MAB_1613	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
MAB_1617c	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
MAB_1618	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
MAB_1619	COG0542	response to heat
MAB_1621	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
MAB_1623	COG0406	alpha-ribazole phosphatase activity
MAB_1624	COG2755	lipolytic protein G-D-S-L family
MAB_1628c	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
MAB_1635	COG2308	Evidence 4 Homologs of previously reported genes of
MAB_1637	COG1305	Transglutaminase-like
MAB_1643	COG3387	PFAM Glycoside hydrolase 15-related
MAB_1646c	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
MAB_1653	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
MAB_1654	COG4208	sulfate ABC transporter
MAB_1666	COG0484	heat shock protein binding
MAB_1682	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
MAB_1685	COG0076	glutamate decarboxylase activity
MAB_1692	COG0318	PFAM AMP-dependent synthetase and ligase
MAB_1693	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
MAB_1702	COG0423	glycine-tRNA ligase activity
MAB_1703	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
MAB_1704c	COG2515	1-aminocyclopropane-1-carboxylate deaminase
MAB_1708	COG0358	DNA primase activity
MAB_1720	COG0745	RESPONSE REGULATOR receiver
MAB_1721	COG5002	protein histidine kinase activity
MAB_1805	COG3179	chitinase
MAB_1846	COG0488	(ABC) transporter
MAB_1851	COG1960	acyl-CoA dehydrogenase activity
MAB_1852c	COG1335	isochorismatase
MAB_1854c	COG0058	SHG alpha-glucan phosphorylase activity
MAB_1862	COG1804	L-carnitine dehydratase bile acid-inducible protein F
MAB_1863	COG1960	acyl-CoA dehydrogenase activity
MAB_1864	COG0183	Belongs to the thiolase family
MAB_1868c	COG1228	amidohydrolase
MAB_1874	COG1028	Short-chain dehydrogenase reductase Sdr
MAB_1874	COG0604	alcohol dehydrogenase
MAB_1874	COG3321	synthase
MAB_1878c	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
MAB_1884c	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
MAB_1889	COG1804	L-carnitine dehydratase bile acid-inducible protein F
MAB_1897c	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
MAB_1898	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
MAB_1909c	COG0714	Associated with various cellular activities
MAB_1913	COG0557	exoribonuclease II activity
MAB_1915	COG0318	PFAM AMP-dependent synthetase and ligase
MAB_1920	COG0174	glutamine synthetase
MAB_1921	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
MAB_1927	COG2205	protein histidine kinase activity
MAB_1933c	COG0174	glutamine synthetase
MAB_1935	COG0477	Major facilitator Superfamily
MAB_1937	COG3486	L-lysine 6-monooxygenase (NADPH) activity
MAB_1942c	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
MAB_1943c	COG0321	lipoyl(octanoyl) transferase activity
MAB_1946	COG1872	DUF167
MAB_1950	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
MAB_1952c	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
MAB_1953c	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
MAB_1959	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
MAB_1968c	COG2010	Cytochrome c
MAB_1969c	COG1845	cytochrome c oxidase, subunit III
MAB_1970	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
MAB_1977	COG2226	methyltransferase
MAB_1982	COG0003	Pfam Anion-transporting ATPase
MAB_1984	COG0204	Acyl-transferase
MAB_1985	COG5650	phosphatidylinositol metabolic process
MAB_1987	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
MAB_1992c	COG0142	geranyltranstransferase activity
MAB_2000	COG0768	penicillin binding
MAB_2004	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
MAB_2006	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
MAB_2009	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
MAB_2014c	COG0640	Transcriptional regulator
MAB_2024	COG0154	amidase activity
MAB_2026	COG2957	Belongs to the agmatine deiminase family
MAB_2028	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
MAB_2030	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
MAB_2032	COG1028	Short-chain dehydrogenase reductase Sdr
MAB_2038	COG2814	Major facilitator Superfamily
MAB_2053	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
MAB_2054	COG2030	dehydratase
MAB_2058	COG1024	Enoyl-CoA hydratase
MAB_2061c	COG1309	transcriptional regulator
MAB_2067c	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
MAB_2075	COG2072	flavoprotein involved in K transport
MAB_2077	COG2072	flavoprotein involved in K transport
MAB_2080	COG0318	PFAM AMP-dependent synthetase and ligase
MAB_2081	COG1960	acyl-CoA dehydrogenase activity
MAB_2085	COG1960	acyl-CoA dehydrogenase activity
MAB_2086c	COG2801	Transposase and inactivated derivatives
MAB_2087	COG2963	transposase activity
MAB_2091	COG3621	Patatin-like phospholipase
MAB_2102	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
MAB_2108	COG1968	undecaprenyl-diphosphatase activity
MAB_2115	COG1218	3'(2'),5'-bisphosphate nucleotidase
MAB_2117	COG1028	Short-chain dehydrogenase reductase Sdr
MAB_2122	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
MAB_2124	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
MAB_2124	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
MAB_2127c	COG2860	membrane
MAB_2129	COG0646	methionine synthase
MAB_2129	COG1410	methionine synthase
MAB_2130	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
MAB_2132	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
MAB_2139	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
MAB_2140	COG1034	ATP synthesis coupled electron transport
MAB_2141	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
MAB_2142	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
MAB_2158c	COG0513	Belongs to the DEAD box helicase family
MAB_2165	COG0028	Belongs to the TPP enzyme family
MAB_2168	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
MAB_2169c	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
MAB_2170	COG4122	O-methyltransferase activity
MAB_2176	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
MAB_2177	COG4521	taurine ABC transporter
MAB_2178	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
MAB_2186	COG2378	regulation of single-species biofilm formation
MAB_2187	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
MAB_2194	COG0300	oxidoreductase activity
MAB_2205	COG1574	metal-dependent hydrolase with the TIM-barrel fold
MAB_2207	COG0463	Glycosyl transferase, family 2
MAB_2212	COG0604	alcohol dehydrogenase
MAB_2212	COG1028	Short-chain dehydrogenase reductase Sdr
MAB_2212	COG3321	synthase
MAB_2216	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
MAB_2218	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
MAB_2219	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
MAB_2223	COG3476	COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)
MAB_2225c	COG1404	Belongs to the peptidase S8 family
MAB_2228c	COG4842	Belongs to the WXG100 family
MAB_2234c	COG0464	growth
MAB_2238	COG0583	DNA-binding transcription factor activity
MAB_2244	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
MAB_2245	COG1169	isochorismate synthase
MAB_2246	COG0789	Transcriptional regulator
MAB_2247c	COG1021	2,3-dihydroxybenzoate-AMP ligase
MAB_2253	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
MAB_2258	COG0318	PFAM AMP-dependent synthetase and ligase
MAB_2258	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
MAB_2258	COG1028	Short-chain dehydrogenase reductase Sdr
MAB_2258	COG0300	oxidoreductase activity
MAB_2258	COG3321	synthase
MAB_2261c	COG1132	(ABC) transporter
MAB_2262c	COG1132	(ABC) transporter
MAB_2262c	COG2375	cellular response to nickel ion
MAB_2263c	COG0477	Major facilitator Superfamily
MAB_2264c	COG5285	phytanoyl-CoA dioxygenase
MAB_2266c	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
MAB_2267c	COG0456	acetyltransferase
MAB_2270c	COG2837	iron assimilation
MAB_2272c	COG2186	Transcriptional regulator
MAB_2273	COG2807	transmembrane transport
MAB_2275	COG2409	Drug exporters of the RND superfamily
MAB_2276c	COG3629	intracellular signal transduction
MAB_2277	COG1012	belongs to the aldehyde dehydrogenase family
MAB_2285	COG0475	glutathione-regulated potassium exporter activity
MAB_2298	COG0237	dephospho-CoA kinase activity
MAB_2298	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
MAB_2334	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
MAB_2335	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
MAB_2335	COG0072	phenylalanine-tRNA ligase activity
MAB_2337	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
MAB_2338	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
MAB_2339	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
MAB_2340	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
MAB_2341	COG1438	arginine binding
MAB_2342	COG0137	argininosuccinate synthase activity
MAB_2351c	COG1309	transcriptional regulator
MAB_2352	COG2094	Belongs to the DNA glycosylase MPG family
MAB_2357	COG0647	UMP catabolic process
MAB_2360	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
MAB_2364	COG0504	CTP synthase activity
MAB_2365	COG0494	nUDIX hydrolase
MAB_2369	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
MAB_2372	COG1160	GTP binding
MAB_2374c	COG1403	HNH endonuclease
MAB_2389	COG1053	succinate dehydrogenase
MAB_2389	COG3976	FMN-binding domain protein
MAB_2395	COG1960	acyl-CoA dehydrogenase activity
MAB_2407	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
MAB_2407	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
MAB_2410c	COG1253	flavin adenine dinucleotide binding
MAB_2411c	COG1253	flavin adenine dinucleotide binding
MAB_2413c	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
MAB_2424	COG0832	Belongs to the urease beta subunit family
MAB_2426	COG0830	nickel cation binding
MAB_2429c	COG1252	NADH dehydrogenase
MAB_2431c	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
MAB_2438	COG0243	molybdopterin cofactor binding
MAB_2440	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
MAB_2443	COG1058	Belongs to the CinA family
MAB_2443	COG1546	Belongs to the CinA family
MAB_2445	COG4977	sequence-specific DNA binding
MAB_2446c	COG1741	Belongs to the pirin family
MAB_2450	COG1968	undecaprenyl-diphosphatase activity
MAB_2451c	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
MAB_2456	COG0277	FAD linked oxidase domain protein
MAB_2458c	COG1309	transcriptional regulator
MAB_2461	COG1116	anion transmembrane transporter activity
MAB_2462	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
MAB_2463	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
MAB_2468	COG4290	ribonuclease
MAB_2474	COG3883	PFAM NLP P60 protein
MAB_2474	COG0791	NLP P60 protein
MAB_2481	COG0477	Major facilitator Superfamily
MAB_2485c	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
MAB_2486c	COG0069	glutamate synthase activity
MAB_2486c	COG0070	glutamate synthase
MAB_2486c	COG0067	glutamate synthase
MAB_2492	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
MAB_2495	COG1960	acyl-CoA dehydrogenase activity
MAB_2498c	COG0443	Heat shock 70 kDa protein
MAB_2499c	COG0596	Alpha beta hydrolase
MAB_2503c	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
MAB_2505c	COG3957	D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase
MAB_2510c	COG2264	protein methyltransferase activity
MAB_2524	COG1982	Orn Lys Arg decarboxylase major
MAB_2537c	COG0028	Belongs to the TPP enzyme family
MAB_2539c	COG0318	PFAM AMP-dependent synthetase and ligase
MAB_2543c	COG1309	transcriptional regulator
MAB_2544c	COG2957	Belongs to the agmatine deiminase family
MAB_2545c	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
MAB_2548c	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
MAB_2558	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
MAB_2561c	COG1274	phosphoenolpyruvate carboxykinase (GTP) activity
MAB_2565c	COG0640	Transcriptional regulator
MAB_2567	COG0798	PFAM Bile acid sodium symporter
MAB_2568	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
MAB_2569c	COG0390	transport system, permease component
MAB_2574c	COG0318	PFAM AMP-dependent synthetase and ligase
MAB_2575c	COG0179	Fumarylacetoacetate (FAA) hydrolase
MAB_2581	COG0745	RESPONSE REGULATOR receiver
MAB_2582	COG2205	protein histidine kinase activity
MAB_2585	COG1917	Cupin 2, conserved barrel domain protein
MAB_2586	COG3707	response regulator
MAB_2595	COG3467	pyridoxamine 5'-phosphate
MAB_2596c	COG4308	Limonene-1,2-epoxide hydrolase catalytic domain
MAB_2602c	COG0640	Transcriptional regulator
MAB_2606c	COG1309	transcriptional regulator
MAB_2607	COG2072	flavoprotein involved in K transport
MAB_2609	COG0318	PFAM AMP-dependent synthetase and ligase
MAB_2610	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
MAB_2611	COG0561	phosphatase activity
MAB_2612	COG0673	inositol 2-dehydrogenase activity
MAB_2613	COG0738	Major facilitator superfamily
MAB_2630	COG1271	oxidase subunit
MAB_2631	COG1294	oxidase, subunit
MAB_2632	COG4988	ABC transporter
MAB_2633	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
MAB_2638c	COG1946	Acyl-CoA thioesterase
MAB_2647c	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
MAB_2648c	COG1846	Transcriptional regulator
MAB_2654	COG2072	flavoprotein involved in K transport
MAB_2655	COG0657	acetylesterase activity
MAB_2665c	COG0483	inositol monophosphate 1-phosphatase activity
MAB_2667c	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
MAB_2668c	COG0131	Imidazoleglycerol-phosphate dehydratase
MAB_2669c	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
MAB_2674c	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
MAB_2677c	COG1309	transcriptional regulator
MAB_2680c	COG0583	DNA-binding transcription factor activity
MAB_2681	COG0579	oxidoreductase
MAB_2689	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
MAB_2689	COG2755	lipolytic protein G-D-S-L family
MAB_2700c	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
MAB_2705c	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
MAB_2706c	COG2814	Major facilitator Superfamily
MAB_2707	COG0583	DNA-binding transcription factor activity
MAB_2717c	COG2239	Acts as a magnesium transporter
MAB_2722c	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
MAB_2724c	COG2304	oxidoreductase activity
MAB_2726c	COG0714	Associated with various cellular activities
MAB_2728c	COG0791	NLP P60 protein
MAB_2728c	COG3883	PFAM NLP P60 protein
MAB_2730	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
MAB_2731	COG1309	transcriptional regulator
MAB_2736c	COG0488	(ABC) transporter
MAB_2739c	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
MAB_2742	COG0456	acetyltransferase
MAB_2744c	COG2151	metal-sulfur cluster biosynthetic enzyme
MAB_2747c	COG0396	ATPase activity
MAB_2752	COG1131	(ABC) transporter
MAB_2760	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
MAB_2765	COG1804	L-carnitine dehydratase bile acid-inducible protein F
MAB_2779c	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
MAB_2791c	COG0531	amino acid
MAB_2802c	COG2011	ABC-type metal ion transport system permease component
MAB_2803c	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
MAB_2807	COG0477	Major facilitator Superfamily
MAB_2814	COG0657	acetylesterase activity
MAB_2815c	COG1953	Uracil, thiamine, allantoin
MAB_2817c	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
MAB_2818c	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
MAB_2820c	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
MAB_2822c	COG1758	RNA polymerase activity
MAB_2826c	COG0284	orotidine-5'-phosphate decarboxylase activity
MAB_2827c	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
MAB_2828c	COG0505	Belongs to the CarA family
MAB_2832c	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
MAB_2836c	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
MAB_2838c	COG0006	proline dipeptidase activity
MAB_2841c	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
MAB_2842c	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
MAB_2845	COG4106	trans-aconitate 2-methyltransferase activity
MAB_2848c	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
MAB_2851c	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
MAB_2861	COG0701	Predicted permease
MAB_2866c	COG2272	Belongs to the type-B carboxylesterase lipase family
MAB_2874	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
MAB_2876c	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
MAB_2878c	COG0747	negative chemotaxis
MAB_2879c	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
MAB_2882c	COG2255	four-way junction helicase activity
MAB_2884c	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
MAB_2891c	COG1946	Acyl-CoA thioesterase
MAB_2892c	COG0214	Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
MAB_2894c	COG0438	transferase activity, transferring glycosyl groups
MAB_2902	COG4762	Protein conserved in bacteria
MAB_2913	COG1309	transcriptional regulator
MAB_2918c	COG3878	Protein conserved in bacteria
MAB_2922c	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
MAB_2925c	COG2080	2 iron, 2 sulfur cluster binding
MAB_2925c	COG1529	Aldehyde oxidase and xanthine dehydrogenase
MAB_2928	COG0402	S-adenosylhomocysteine deaminase activity
MAB_2932c	COG2233	PERMEase
MAB_2936	COG1953	Uracil, thiamine, allantoin
MAB_2938	COG1301	dicarboxylic acid transport
MAB_2940	COG4266	Belongs to the allantoicase family
MAB_2946c	COG2267	carboxylic ester hydrolase activity
MAB_2947c	COG1960	acyl-CoA dehydrogenase activity
MAB_2948c	COG1028	Short-chain dehydrogenase reductase Sdr
MAB_2951c	COG0183	Belongs to the thiolase family
MAB_2955	COG0501	Belongs to the peptidase M48B family
MAB_2958	COG0477	Major facilitator Superfamily
MAB_2969	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
MAB_2971c	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
MAB_2979	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
MAB_2984c	COG3253	May function as heme-dependent peroxidase
MAB_2985c	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
MAB_2986c	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
MAB_2988	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
MAB_2991c	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
MAB_2992c	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
MAB_2993c	COG0531	amino acid
MAB_2994	COG0569	domain protein
MAB_3000	COG0702	epimerase
MAB_3003c	COG0756	dUTP diphosphatase activity
MAB_3012	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
MAB_3022c	COG3220	belongs to the UPF0276 family
MAB_3037c	COG1388	LysM domain
MAB_3040c	COG1960	acyl-CoA dehydrogenase activity
MAB_3042c	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
MAB_3046	COG1196	nuclear chromosome segregation
MAB_3050	COG1126	abc transporter atp-binding protein
MAB_3051	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
MAB_3052	COG0765	amino acid transport
MAB_3053	COG0765	amino acid transport
MAB_3063	COG4308	Limonene-1,2-epoxide hydrolase catalytic domain
MAB_3064	COG4308	Limonene-1,2-epoxide hydrolase catalytic domain
MAB_3067c	COG1842	Phage shock protein A
MAB_3068c	COG1396	sequence-specific DNA binding
MAB_3070	COG1028	Short-chain dehydrogenase reductase Sdr
MAB_3072	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
MAB_3083c	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
MAB_3084c	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
MAB_3087c	COG3214	Protein conserved in bacteria
MAB_3096c	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
MAB_3098	COG0659	secondary active sulfate transmembrane transporter activity
MAB_3100	COG0686	Belongs to the AlaDH PNT family
MAB_3103c	COG1028	Short-chain dehydrogenase reductase Sdr
MAB_3117c	COG2977	Belongs to the P-Pant transferase superfamily
MAB_3118c	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
MAB_3122	COG1960	acyl-CoA dehydrogenase activity
MAB_3123	COG1960	acyl-CoA dehydrogenase activity
MAB_3124	COG1024	Enoyl-CoA hydratase
MAB_3129c	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
MAB_3133c	COG1017	nitric oxide dioxygenase activity
MAB_3133c	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
MAB_3134c	COG1959	2 iron, 2 sulfur cluster binding
MAB_3143c	COG1648	precorrin-2 dehydrogenase activity
MAB_3143c	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
MAB_3148c	COG1028	Short-chain dehydrogenase reductase Sdr
MAB_3148c	COG0604	alcohol dehydrogenase
MAB_3148c	COG3321	synthase
MAB_3159c	COG0579	oxidoreductase
MAB_3163c	COG1492	cobalamin metabolic process
MAB_3165c	COG1376	ErfK ybiS ycfS ynhG family protein
MAB_3170c	COG0750	zinc metalloprotease
MAB_3175c	COG0820	rRNA (adenine-C2-)-methyltransferase activity
MAB_3188c	COG0528	UMP kinase activity
MAB_3189c	COG3973	AAA domain
MAB_3192c	COG2723	6-phospho-beta-galactosidase activity
MAB_3199c	COG1309	transcriptional regulator
MAB_3208c	COG0583	DNA-binding transcription factor activity
MAB_3214c	COG0792	nuclease activity
MAB_3226c	COG0336	Belongs to the RNA methyltransferase TrmD family
MAB_3234	COG1686	Belongs to the peptidase S11 family
MAB_3238c	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
MAB_3242	COG1304	FMN binding
MAB_3252c	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
MAB_3253c	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
MAB_3256c	COG0571	ribonuclease III activity
MAB_3258c	COG3599	regulation of cell shape
MAB_3266c	COG0742	ribosomal rna small subunit methyltransferase
MAB_3267c	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
MAB_3270c	COG0657	acetylesterase activity
MAB_3271	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
MAB_3275	COG2124	cytochrome p450
MAB_3278c	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
MAB_3279c	COG1461	Dihydroxyacetone kinase
MAB_3281	COG1024	Enoyl-CoA hydratase
MAB_3286c	COG1181	Belongs to the D-alanine--D-alanine ligase family
MAB_3287c	COG0626	cystathionine gamma-synthase activity
MAB_3288c	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
MAB_3299c	COG0179	Fumarylacetoacetate (FAA) hydrolase
MAB_3302	COG2271	Major facilitator Superfamily
MAB_3308	COG0583	DNA-binding transcription factor activity
MAB_3310c	COG0778	Nitroreductase
MAB_3313c	COG1309	transcriptional regulator
MAB_3314	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
MAB_3315	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
MAB_3316	COG2124	cytochrome p450
MAB_3322c	COG0440	acetolactate synthase activity
MAB_3325c	COG1748	Saccharopine dehydrogenase
MAB_3326c	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
MAB_3330	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
MAB_3334c	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
MAB_3336c	COG2272	Belongs to the type-B carboxylesterase lipase family
MAB_3339	COG0745	RESPONSE REGULATOR receiver
MAB_3340	COG2205	protein histidine kinase activity
MAB_3344	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
MAB_3350	COG1024	Enoyl-CoA hydratase
MAB_3351c	COG0778	Nitroreductase
MAB_3353c	COG2252	PERMEase
MAB_3361	COG2197	response regulator
MAB_3362c	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
MAB_3364	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
MAB_3369	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
MAB_3372	COG1309	transcriptional regulator
MAB_3378c	COG0110	maltose O-acetyltransferase activity
MAB_3379	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
MAB_3384c	COG1119	ATPase activity
MAB_3386c	COG2364	Membrane
MAB_3387	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
MAB_3390	COG4607	ABC-type enterochelin transport system periplasmic component
MAB_3400	COG1064	alcohol dehydrogenase
MAB_3404c	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
MAB_3405	COG1028	Short-chain dehydrogenase reductase Sdr
MAB_3416	COG0477	Major facilitator Superfamily
MAB_3420c	COG1028	Short-chain dehydrogenase reductase Sdr
MAB_3426c	COG1028	Short-chain dehydrogenase reductase Sdr
MAB_3431c	COG1335	isochorismatase
MAB_3433c	COG2855	membrane
MAB_3435	COG0318	PFAM AMP-dependent synthetase and ligase
MAB_3438	COG1028	Short-chain dehydrogenase reductase Sdr
MAB_3440c	COG1028	Short-chain dehydrogenase reductase Sdr
MAB_3441c	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
MAB_3452c	COG2272	Belongs to the type-B carboxylesterase lipase family
MAB_3455c	COG0183	Belongs to the thiolase family
MAB_3462c	COG1309	transcriptional regulator
MAB_3468	COG0789	Transcriptional regulator
MAB_3470c	COG0028	Belongs to the TPP enzyme family
MAB_3474c	COG2177	Part of the ABC transporter FtsEX involved in
MAB_3475c	COG2884	Cell division ATP-binding protein ftsE
MAB_3477c	COG0668	transmembrane transport
MAB_3485	COG0483	inositol monophosphate 1-phosphatase activity
MAB_3486	COG1960	acyl-CoA dehydrogenase activity
MAB_3487	COG1960	acyl-CoA dehydrogenase activity
MAB_3489c	COG0318	PFAM AMP-dependent synthetase and ligase
MAB_3491	COG0542	response to heat
MAB_3499c	COG3480	Lon protease (S16) C-terminal proteolytic domain
MAB_3500	COG3011	Protein conserved in bacteria
MAB_3503	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
MAB_3504	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
MAB_3506c	COG0300	oxidoreductase activity
MAB_3507	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
MAB_3514c	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
MAB_3514c	COG0475	glutathione-regulated potassium exporter activity
MAB_3517	COG0596	Alpha beta hydrolase
MAB_3520c	COG0745	RESPONSE REGULATOR receiver
MAB_3522c	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
MAB_3522c	COG2146	nitrite reductase [NAD(P)H] activity
MAB_3523c	COG2223	nitrite transmembrane transporter activity
MAB_3531	COG0513	Belongs to the DEAD box helicase family
MAB_3534	COG0406	alpha-ribazole phosphatase activity
MAB_3538	COG1597	lipid kinase activity
MAB_3541c	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
MAB_3543c	COG1595	DNA-templated transcription, initiation
MAB_3544	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
MAB_3545c	COG2135	peptidase activity
MAB_3546	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
MAB_3547	COG1162	GTPase activity
MAB_3554	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
MAB_3574c	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
MAB_3575c	COG0604	alcohol dehydrogenase
MAB_3575c	COG3321	synthase
MAB_3576c	COG3321	synthase
MAB_3576c	COG0604	alcohol dehydrogenase
MAB_3577c	COG1960	acyl-CoA dehydrogenase activity
MAB_3579c	COG0318	PFAM AMP-dependent synthetase and ligase
MAB_3580c	COG0653	protein targeting
MAB_3582	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
MAB_3583c	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
MAB_3586c	COG1309	transcriptional regulator
MAB_3589c	COG5401	PFAM Sporulation and spore germination
MAB_3590c	COG5002	protein histidine kinase activity
MAB_3592c	COG0318	PFAM AMP-dependent synthetase and ligase
MAB_3593	COG1285	pathogenesis
MAB_3598c	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
MAB_3599c	COG0531	amino acid
MAB_3601c	COG1482	cell wall glycoprotein biosynthetic process
MAB_3607	COG0391	Required for morphogenesis under gluconeogenic growth conditions
MAB_3608	COG1478	Catalyzes the GTP-dependent successive addition of multiple gamma-linked L-glutamates to the L-lactyl phosphodiester of 7,8-didemethyl-8-hydroxy-5-deazariboflavin (F420-0) to form polyglutamated F420 derivatives
MAB_3608	COG0778	Nitroreductase
MAB_3611c	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
MAB_3614	COG1316	TRANSCRIPTIONal
MAB_3619c	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
MAB_3621c	COG2175	clavaminate synthase activity
MAB_3626c	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
MAB_3626c	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
MAB_3628c	COG0318	PFAM AMP-dependent synthetase and ligase
MAB_3631	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
MAB_3635c	COG3265	gluconokinase activity
MAB_3636c	COG1960	acyl-CoA dehydrogenase activity
MAB_3639	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
MAB_3643	COG4770	biotin carboxylase activity
MAB_3645	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
MAB_3649	COG1012	belongs to the aldehyde dehydrogenase family
MAB_3650	COG1309	transcriptional regulator
MAB_3651	COG1201	RNA secondary structure unwinding
MAB_3654c	COG0564	pseudouridine synthase activity
MAB_3658c	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
MAB_3658c	COG1473	amidohydrolase
MAB_3661	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
MAB_3664	COG3883	PFAM NLP P60 protein
MAB_3664	COG0791	NLP P60 protein
MAB_3673	COG2009	succinate dehydrogenase
MAB_3676	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
MAB_3677	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
MAB_3678c	COG1595	DNA-templated transcription, initiation
MAB_3681	COG1686	Belongs to the peptidase S11 family
MAB_3684c	COG0708	Exodeoxyribonuclease III
MAB_3696c	COG1733	regulation of RNA biosynthetic process
MAB_3697	COG2910	NAD(P)H-binding
MAB_3698	COG1716	ATPase activity
MAB_3698	COG1131	(ABC) transporter
MAB_3698	COG0842	Transport permease protein
MAB_3699c	COG1357	PFAM Pentapeptide repeats (8 copies)
MAB_3702	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
MAB_3703c	COG0587	DNA-directed DNA polymerase activity
MAB_3704	COG1073	alpha beta
MAB_3705	COG1309	transcriptional regulator
MAB_3718c	COG0518	GMP synthase (glutamine-hydrolyzing) activity
MAB_3718c	COG0519	Catalyzes the synthesis of GMP from XMP
MAB_3720c	COG0516	GMP reductase activity
MAB_3732c	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
MAB_3735c	COG0456	acetyltransferase
MAB_3739c	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
MAB_3740c	COG0076	glutamate decarboxylase activity
MAB_3742c	COG2267	carboxylic ester hydrolase activity
MAB_3743c	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
MAB_3748	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
MAB_3750c	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
MAB_3751c	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
MAB_3758	COG1404	Belongs to the peptidase S8 family
MAB_3764	COG2267	carboxylic ester hydrolase activity
MAB_3774c	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
MAB_3775c	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
MAB_3777	COG2268	Band 7 protein
MAB_3779	COG1088	dTDP-glucose 4,6-dehydratase activity
MAB_3780	COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase activity
MAB_3789c	COG0616	signal peptide processing
MAB_3792	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
MAB_3796c	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
MAB_3798c	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
MAB_3800c	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
MAB_3803c	COG2272	Belongs to the type-B carboxylesterase lipase family
MAB_3808c	COG0477	Major facilitator Superfamily
MAB_3811c	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
MAB_3819c	COG0088	Forms part of the polypeptide exit tunnel
MAB_3820c	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
MAB_3821c	COG0051	transcription antitermination factor activity, RNA binding
MAB_3829c	COG0531	amino acid
MAB_3836c	COG0535	radical SAM domain protein
MAB_3840	COG1834	amidinotransferase
MAB_3841	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
MAB_3842	COG0531	amino acid
MAB_3851c	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
MAB_3852c	COG1309	transcriptional regulator
MAB_3857c	COG1024	Enoyl-CoA hydratase
MAB_3860c	COG1960	acyl-CoA dehydrogenase activity
MAB_3866c	COG1113	amino acid transport
MAB_3869c	COG0085	RNA polymerase activity
MAB_3870c	COG0243	molybdopterin cofactor binding
MAB_3881	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
MAB_3884	COG0277	FAD linked oxidase domain protein
MAB_3888	COG4941	Belongs to the sigma-70 factor family
MAB_3895c	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
MAB_3900c	COG0783	Belongs to the Dps family
MAB_3901	COG0693	protein deglycase activity
MAB_3910	COG1404	Belongs to the peptidase S8 family
MAB_3913	COG1280	lysine exporter protein (LysE YggA)
MAB_3927c	COG0501	Belongs to the peptidase M48B family
MAB_3928c	COG0142	geranyltranstransferase activity
MAB_3929	COG0644	oxidoreductase
MAB_3931c	COG0438	transferase activity, transferring glycosyl groups
MAB_3935c	COG4948	Mandelate Racemase Muconate Lactonizing
MAB_3940c	COG3706	GGDEF domain
MAB_3943	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
MAB_3945	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
MAB_3946c	COG1028	Short-chain dehydrogenase reductase Sdr
MAB_3947	COG4221	oxidoreductase activity
MAB_3956c	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
MAB_3957	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
MAB_3959c	COG0542	response to heat
MAB_3964	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
MAB_3973c	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
MAB_3974c	COG1333	cytochrome c biogenesis protein
MAB_3975c	COG0785	Cytochrome C biogenesis protein
MAB_3977c	COG0406	alpha-ribazole phosphatase activity
MAB_3981c	COG3590	peptidase
MAB_3991c	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
MAB_3991c	COG1587	Uroporphyrinogen-III synthase
MAB_3996	COG2030	dehydratase
MAB_4001c	COG2070	2-Nitropropane dioxygenase
MAB_4005c	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
MAB_4006	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
MAB_4027	COG1309	transcriptional regulator
MAB_4029	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
MAB_4039c	COG2072	flavoprotein involved in K transport
MAB_4042c	COG2072	flavoprotein involved in K transport
MAB_4043c	COG1028	Short-chain dehydrogenase reductase Sdr
MAB_4044c	COG0657	acetylesterase activity
MAB_4045c	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
MAB_4047c	COG0745	RESPONSE REGULATOR receiver
MAB_4048c	COG5002	protein histidine kinase activity
MAB_4050c	COG2072	flavoprotein involved in K transport
MAB_4053c	COG0300	oxidoreductase activity
MAB_4064	COG2814	Major facilitator Superfamily
MAB_4066c	COG0812	UDP-N-acetylmuramate dehydrogenase activity
MAB_4085c	COG2733	membrane
MAB_4087	COG2326	polyphosphate kinase activity
MAB_4088c	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
MAB_4095c	COG2224	Isocitrate lyase
MAB_4103c	COG2226	methyltransferase
MAB_4113	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
MAB_4120c	COG0667	Aldo Keto reductase
MAB_4124	COG4552	Acetyltransferase involved in intracellular survival and related
MAB_4125	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
MAB_4130	COG1505	serine-type exopeptidase activity
MAB_4134	COG1073	alpha beta
MAB_4135c	COG2326	polyphosphate kinase activity
MAB_4138c	COG2223	nitrite transmembrane transporter activity
MAB_4139	COG0640	Transcriptional regulator
MAB_4145	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
MAB_4149c	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
MAB_4154c	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
MAB_4155c	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
MAB_4156c	COG1028	Short-chain dehydrogenase reductase Sdr
MAB_4158	COG1960	acyl-CoA dehydrogenase activity
MAB_4159	COG1960	acyl-CoA dehydrogenase activity
MAB_4160	COG0318	PFAM AMP-dependent synthetase and ligase
MAB_4162c	COG2070	2-Nitropropane dioxygenase
MAB_4164	COG1024	Enoyl-CoA hydratase
MAB_4165	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
MAB_4166c	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
MAB_4173	COG4638	Rieske (2fe-2S)
MAB_4181	COG0175	sulfate reduction
MAB_4195c	COG2814	Major facilitator Superfamily
MAB_4197	COG0351	phosphomethylpyrimidine kinase
MAB_4199	COG1252	NADH dehydrogenase
MAB_4201c	COG1309	transcriptional regulator
MAB_4203	COG1012	belongs to the aldehyde dehydrogenase family
MAB_4210	COG0494	nUDIX hydrolase
MAB_4212c	COG2234	aminopeptidase activity
MAB_4213c	COG2234	aminopeptidase activity
MAB_4215c	COG1131	(ABC) transporter
MAB_4216c	COG2022	thiamine diphosphate biosynthetic process
MAB_4223	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
MAB_4224	COG0515	serine threonine protein kinase
MAB_4225c	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
MAB_4231	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
MAB_4232c	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
MAB_4233c	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
MAB_4234c	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
MAB_4236c	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
MAB_4237c	COG1126	abc transporter atp-binding protein
MAB_4245c	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
MAB_4251	COG1994	Peptidase M50
MAB_4255	COG0586	Pfam SNARE associated Golgi protein
MAB_4261c	COG4221	oxidoreductase activity
MAB_4265c	COG0542	response to heat
MAB_4270c	COG0789	Transcriptional regulator
MAB_4271c	COG0484	heat shock protein binding
MAB_4272c	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
MAB_4285	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
MAB_4285	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
MAB_4293	COG0247	lactate metabolic process
MAB_4293	COG2181	nitrate reductase activity
MAB_4295c	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
MAB_4303	COG3345	alpha-galactosidase
MAB_4305	COG1262	PFAM Formylglycine-generating sulfatase enzyme
MAB_4306	COG1305	Transglutaminase-like
MAB_4309c	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
MAB_4322	COG1012	belongs to the aldehyde dehydrogenase family
MAB_4324c	COG0454	-acetyltransferase
MAB_4335	COG1028	Short-chain dehydrogenase reductase Sdr
MAB_4336	COG1960	acyl-CoA dehydrogenase activity
MAB_4339c	COG3268	Saccharopine dehydrogenase
MAB_4340c	COG0318	PFAM AMP-dependent synthetase and ligase
MAB_4341	COG1793	dna ligase
MAB_4341	COG3285	dna ligase
MAB_4342c	COG0494	nUDIX hydrolase
MAB_4344c	COG2902	Dehydrogenase
MAB_4345c	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
MAB_4348c	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
MAB_4352c	COG1309	transcriptional regulator
MAB_4354	COG0778	Nitroreductase
MAB_4355	COG0179	Fumarylacetoacetate (FAA) hydrolase
MAB_4361	COG0179	Fumarylacetoacetate (FAA) hydrolase
MAB_4362	COG0318	PFAM AMP-dependent synthetase and ligase
MAB_4363c	COG1396	sequence-specific DNA binding
MAB_4366c	COG2267	carboxylic ester hydrolase activity
MAB_4367c	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
MAB_4370c	COG4638	Rieske (2fe-2S)
MAB_4371	COG0604	alcohol dehydrogenase
MAB_4371	COG3321	synthase
MAB_4371	COG1028	Short-chain dehydrogenase reductase Sdr
MAB_4372	COG3384	dioxygenase
MAB_4373	COG3971	2-oxopent-4-enoate hydratase activity
MAB_4376c	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
MAB_4377c	COG0318	PFAM AMP-dependent synthetase and ligase
MAB_4384	COG1309	transcriptional regulator
MAB_4389	COG1309	transcriptional regulator
MAB_4390	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
MAB_4393	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
MAB_4394	COG1984	allophanate hydrolase subunit 2
MAB_4410c	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
MAB_4411c	COG1802	Transcriptional regulator
MAB_4417c	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
MAB_4419	COG0473	3-isopropylmalate dehydrogenase activity
MAB_4422	COG1053	succinate dehydrogenase
MAB_4426	COG0640	Transcriptional regulator
MAB_4436c	COG2318	DinB family
MAB_4437	COG1960	acyl-CoA dehydrogenase activity
MAB_4440c	COG1660	Displays ATPase and GTPase activities
MAB_4442c	COG0183	Belongs to the thiolase family
MAB_4443	COG1028	Short-chain dehydrogenase reductase Sdr
MAB_4444	COG2030	dehydratase
MAB_4448	COG0659	secondary active sulfate transmembrane transporter activity
MAB_4449c	COG1309	transcriptional regulator
MAB_4450	COG0861	Integral membrane protein TerC family
MAB_4455c	COG0318	PFAM AMP-dependent synthetase and ligase
MAB_4458c	COG1472	Belongs to the glycosyl hydrolase 3 family
MAB_4459c	COG4941	Belongs to the sigma-70 factor family
MAB_4472	COG4981	capsule polysaccharide biosynthetic process
MAB_4480c	COG0438	transferase activity, transferring glycosyl groups
MAB_4489c	COG1250	3-hydroxyacyl-CoA dehydrogenase
MAB_4498c	COG2197	response regulator
MAB_4499	COG3850	Histidine kinase
MAB_4502c	COG1274	phosphoenolpyruvate carboxykinase (GTP) activity
MAB_4508	COG2409	Drug exporters of the RND superfamily
MAB_4517c	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
MAB_4519c	COG2197	response regulator
MAB_4525	COG2353	YceI-like domain
MAB_4529	COG2409	Drug exporters of the RND superfamily
MAB_4532c	COG4552	Acetyltransferase involved in intracellular survival and related
MAB_4533	COG1832	CoA-binding protein
MAB_4536	COG3590	peptidase
MAB_4537c	COG1376	ErfK ybiS ycfS ynhG family protein
MAB_4538c	COG1960	acyl-CoA dehydrogenase activity
MAB_4540c	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
MAB_4542c	COG1937	Protein conserved in bacteria
MAB_4547	COG1012	belongs to the aldehyde dehydrogenase family
MAB_4548	COG4122	O-methyltransferase activity
MAB_4551c	COG2267	carboxylic ester hydrolase activity
MAB_4557c	COG1704	LemA family
MAB_4559	COG0318	PFAM AMP-dependent synthetase and ligase
MAB_4570c	COG1024	Enoyl-CoA hydratase
MAB_4571	COG1802	Transcriptional regulator
MAB_4573c	COG2267	carboxylic ester hydrolase activity
MAB_4574c	COG1309	transcriptional regulator
MAB_4580c	COG0435	Glutathione S-transferase
MAB_4588c	COG1024	Enoyl-CoA hydratase
MAB_4590	COG2211	Major facilitator Superfamily
MAB_4591	COG2365	Tyrosine phosphatase family
MAB_4604c	COG1028	Short-chain dehydrogenase reductase Sdr
MAB_4605c	COG1012	belongs to the aldehyde dehydrogenase family
MAB_4608	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
MAB_4609c	COG1960	acyl-CoA dehydrogenase activity
MAB_4610c	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
MAB_4613	COG2226	methyltransferase
MAB_4616c	COG3800	Transcriptional regulator
MAB_4616c	COG1396	sequence-specific DNA binding
MAB_4618	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
MAB_4626c	COG0318	PFAM AMP-dependent synthetase and ligase
MAB_4638	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
MAB_4640c	COG0129	dihydroxy-acid dehydratase activity
MAB_4644c	COG2186	Transcriptional regulator
MAB_4650c	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
MAB_4651c	COG1804	L-carnitine dehydratase bile acid-inducible protein F
MAB_4653	COG0723	plastoquinol--plastocyanin reductase activity
MAB_4657c	COG1028	Short-chain dehydrogenase reductase Sdr
MAB_4665c	COG1028	Short-chain dehydrogenase reductase Sdr
MAB_4668c	COG0318	PFAM AMP-dependent synthetase and ligase
MAB_4670c	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
MAB_4671c	COG1136	(ABC) transporter
MAB_4673c	COG1104	cysteine desulfurase activity
MAB_4684	COG1309	transcriptional regulator
MAB_4686	COG1819	glycosyl
MAB_4690c	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
MAB_4695c	COG1819	glycosyl
MAB_4717c	COG3263	regulation of cellular component size
MAB_4733	COG1595	DNA-templated transcription, initiation
MAB_4735	COG0783	Belongs to the Dps family
MAB_4743c	COG1252	NADH dehydrogenase
MAB_4747	COG1937	Protein conserved in bacteria
MAB_4752	COG1403	HNH endonuclease
MAB_4766	COG2140	Oxalate decarboxylase
MAB_4771	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
MAB_4775c	COG1376	ErfK ybiS ycfS ynhG family protein
MAB_4780	COG2030	dehydratase
MAB_4781c	COG0488	(ABC) transporter
MAB_4782	COG3757	hydrolase, family 25
MAB_4795c	COG0583	DNA-binding transcription factor activity
MAB_4797	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
MAB_4800	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
MAB_4801	COG3757	hydrolase, family 25
MAB_4842	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
MAB_4848c	COG0745	RESPONSE REGULATOR receiver
MAB_4849c	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
MAB_4861c	COG0640	Transcriptional regulator
MAB_4862	COG0640	Transcriptional regulator
MAB_4863	COG0798	PFAM Bile acid sodium symporter
MAB_4864	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
MAB_4865	COG0446	pyridine nucleotide-disulphide oxidoreductase
MAB_4867c	COG0717	Belongs to the dCTP deaminase family
MAB_4875c	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
MAB_4880c	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
MAB_4882c	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
MAB_4889	COG0454	-acetyltransferase
MAB_4898c	COG0629	single-stranded DNA binding
MAB_4901c	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
MAB_4907	COG1260	myo-inositol-1-phosphate synthase
MAB_4909	COG1113	amino acid transport
MAB_4912c	COG1309	transcriptional regulator
MAB_4913c	COG1028	Short-chain dehydrogenase reductase Sdr
MAB_4916c	COG0508	dehydrogenase complex catalyzes the overall conversion of
MAB_4917c	COG0022	dehydrogenase e1 component
MAB_4920c	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
MAB_4921c	COG2311	Membrane
MAB_4934c	COG0617	tRNA 3'-terminal CCA addition
MAB_4938	COG1595	DNA-templated transcription, initiation
MAB_4942	COG3409	Peptidoglycan-binding domain 1 protein
MAB_4942	COG0860	N-Acetylmuramoyl-L-alanine amidase
MAB_4944c	COG2124	cytochrome p450
MAB_4946	COG1309	transcriptional regulator
MAB_4950c	COG1192	Involved in chromosome partitioning
MAB_4951c	COG0357	Ribosomal RNA small subunit methyltransferase G
MAB_4953c	COG0706	membrane insertase activity
MAB_p03	COG2161	toxin-antitoxin pair type II binding
MAB_p04c	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
MAB_p20c	COG1192	Involved in chromosome partitioning