locus-tag class description LI99_RS00005 PF00712 DNA polymerase III beta subunit, N-terminal domain LI99_RS00005 PF02767 DNA polymerase III beta subunit, central domain LI99_RS00005 PF02768 DNA polymerase III beta subunit, C-terminal domain LI99_RS00010 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LI99_RS00010 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LI99_RS00015 PF02463 RecF/RecN/SMC N terminal domain LI99_RS00020 PF05258 Dna[CI] antecedent, DciA LI99_RS00025 PF00204 DNA gyrase B LI99_RS00025 PF00986 DNA gyrase B subunit, carboxyl terminus LI99_RS00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI99_RS00025 PF01751 Toprim domain LI99_RS00030 PF03989 DNA gyrase C-terminal domain, beta-propeller LI99_RS00030 PF00521 DNA gyrase/topoisomerase IV, subunit A LI99_RS00035 PF12089 Transmembrane domain of unknown function (DUF3566) LI99_RS00060 PF01032 FecCD transport family LI99_RS00065 PF01032 FecCD transport family LI99_RS00070 PF00005 ABC transporter LI99_RS00075 PF00551 Formyl transferase LI99_RS00075 PF02911 Formyl transferase, C-terminal domain LI99_RS00080 PF03621 MbtH-like protein LI99_RS00085 PF00664 ABC transporter transmembrane region LI99_RS00085 PF00005 ABC transporter LI99_RS00090 PF00664 ABC transporter transmembrane region LI99_RS00090 PF00005 ABC transporter LI99_RS00095 PF00550 Phosphopantetheine attachment site LI99_RS00095 PF00668 Condensation domain LI99_RS00095 PF00501 AMP-binding enzyme LI99_RS00095 PF13193 AMP-binding enzyme C-terminal domain LI99_RS00105 PF02261 Aspartate decarboxylase LI99_RS00110 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) LI99_RS00115 PF10814 Cell wall synthesis protein CwsA LI99_RS00120 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LI99_RS00125 PF10756 Bacterial PH domain LI99_RS00130 PF06781 Cell division protein CrgA LI99_RS00140 PF00117 Glutamine amidotransferase class-I LI99_RS00145 PF00069 Protein kinase domain LI99_RS00145 PF03793 PASTA domain LI99_RS00150 PF00069 Protein kinase domain LI99_RS00155 PF00905 Penicillin binding protein transpeptidase domain LI99_RS00160 PF01098 Cell cycle protein LI99_RS00170 PF16697 Inner membrane component of T3SS, cytoplasmic domain LI99_RS00175 PF12401 Protein of unknown function (DUF2662) LI99_RS00175 PF00498 FHA domain LI99_RS00210 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LI99_RS00240 PF05726 Pirin C-terminal cupin domain LI99_RS00240 PF02678 Pirin LI99_RS00250 PF02467 Transcription factor WhiB LI99_RS00265 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LI99_RS00275 PF10824 Excreted virulence factor EspC, type VII ESX diderm LI99_RS00280 PF14011 EspG family LI99_RS00290 PF17866 AAA lid domain LI99_RS00290 PF00004 ATPase family associated with various cellular activities (AAA) LI99_RS00295 PF05108 Type VII secretion system ESX-1, transport TM domain B LI99_RS00300 PF01580 FtsK/SpoIIIE family LI99_RS00305 PF01580 FtsK/SpoIIIE family LI99_RS00310 PF00934 PE family LI99_RS00315 PF00823 PPE family LI99_RS00320 PF06013 Proteins of 100 residues with WXG LI99_RS00325 PF06013 Proteins of 100 residues with WXG LI99_RS00330 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LI99_RS00335 PF08817 WXG100 protein secretion system (Wss), protein YukD LI99_RS00375 PF18625 ESX-1 secreted protein B PE domain LI99_RS00410 PF11203 Putative type VII ESX secretion system translocon, EccE LI99_RS00415 PF00082 Subtilase family LI99_RS00425 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LI99_RS00425 PF02378 Phosphotransferase system, EIIC LI99_RS00430 PF00294 pfkB family carbohydrate kinase LI99_RS00435 PF00455 DeoR C terminal sensor domain LI99_RS00435 PF08220 DeoR-like helix-turn-helix domain LI99_RS00440 PF02896 PEP-utilising enzyme, TIM barrel domain LI99_RS00440 PF00391 PEP-utilising enzyme, mobile domain LI99_RS00440 PF05524 PEP-utilising enzyme, N-terminal LI99_RS00445 PF05726 Pirin C-terminal cupin domain LI99_RS00445 PF02678 Pirin LI99_RS00465 PF04072 Leucine carboxyl methyltransferase LI99_RS00470 PF04072 Leucine carboxyl methyltransferase LI99_RS00480 PF00106 short chain dehydrogenase LI99_RS00485 PF00107 Zinc-binding dehydrogenase LI99_RS00485 PF08240 Alcohol dehydrogenase GroES-like domain LI99_RS00490 PF01209 ubiE/COQ5 methyltransferase family LI99_RS00505 PF13350 Tyrosine phosphatase family LI99_RS00510 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS00510 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS00510 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS00515 PF07690 Major Facilitator Superfamily LI99_RS00520 PF03466 LysR substrate binding domain LI99_RS00520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI99_RS00525 PF00072 Response regulator receiver domain LI99_RS00525 PF00196 Bacterial regulatory proteins, luxR family LI99_RS00540 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS00540 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS00540 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS00545 PF02233 NAD(P) transhydrogenase beta subunit LI99_RS00550 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LI99_RS00550 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LI99_RS00550 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch LI99_RS00565 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS00570 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LI99_RS00575 PF00005 ABC transporter LI99_RS00585 PF00561 alpha/beta hydrolase fold LI99_RS00600 PF17932 Tetracyclin repressor-like, C-terminal domain LI99_RS00600 PF00440 Bacterial regulatory proteins, tetR family LI99_RS00620 PF01970 Tripartite tricarboxylate transporter TctA family LI99_RS00625 PF00392 Bacterial regulatory proteins, gntR family LI99_RS00625 PF07729 FCD domain LI99_RS00630 PF13378 Enolase C-terminal domain-like LI99_RS00630 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LI99_RS00635 PF00107 Zinc-binding dehydrogenase LI99_RS00635 PF08240 Alcohol dehydrogenase GroES-like domain LI99_RS00650 PF00392 Bacterial regulatory proteins, gntR family LI99_RS00650 PF07729 FCD domain LI99_RS00655 PF00501 AMP-binding enzyme LI99_RS00655 PF13193 AMP-binding enzyme C-terminal domain LI99_RS00660 PF02405 Permease MlaE LI99_RS00665 PF02405 Permease MlaE LI99_RS00690 PF02470 MlaD protein LI99_RS00705 PF06271 RDD family LI99_RS00720 PF06912 Protein of unknown function (DUF1275) LI99_RS00725 PF02720 Domain of unknown function (DUF222) LI99_RS00735 PF04116 Fatty acid hydroxylase superfamily LI99_RS00740 PF00440 Bacterial regulatory proteins, tetR family LI99_RS00740 PF08361 MAATS-type transcriptional repressor, C-terminal region LI99_RS00745 PF01964 Radical SAM ThiC family LI99_RS00745 PF13667 ThiC-associated domain LI99_RS00750 PF02233 NAD(P) transhydrogenase beta subunit LI99_RS00755 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LI99_RS00755 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch LI99_RS00755 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LI99_RS00760 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LI99_RS00760 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LI99_RS00765 PF08546 Ketopantoate reductase PanE/ApbA C terminal LI99_RS00765 PF02558 Ketopantoate reductase PanE/ApbA LI99_RS00770 PF02887 Pyruvate kinase, alpha/beta domain LI99_RS00770 PF00224 Pyruvate kinase, barrel domain LI99_RS00775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI99_RS00775 PF00989 PAS fold LI99_RS00775 PF00512 His Kinase A (phospho-acceptor) domain LI99_RS00780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI99_RS00780 PF03466 LysR substrate binding domain LI99_RS00785 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LI99_RS00785 PF00205 Thiamine pyrophosphate enzyme, central domain LI99_RS00785 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LI99_RS00790 PF02515 CoA-transferase family III LI99_RS00800 PF10531 SLBB domain LI99_RS00800 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LI99_RS00800 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LI99_RS00805 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LI99_RS00805 PF01568 Molydopterin dinucleotide binding domain LI99_RS00805 PF12838 4Fe-4S dicluster domain LI99_RS00805 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LI99_RS00805 PF00384 Molybdopterin oxidoreductase LI99_RS00825 PF02634 FdhD/NarQ family LI99_RS00830 PF07729 FCD domain LI99_RS00830 PF00392 Bacterial regulatory proteins, gntR family LI99_RS00835 PF07690 Major Facilitator Superfamily LI99_RS00840 PF02515 CoA-transferase family III LI99_RS00850 PF07690 Major Facilitator Superfamily LI99_RS00855 PF00850 Histone deacetylase domain LI99_RS00875 PF01266 FAD dependent oxidoreductase LI99_RS00880 PF00497 Bacterial extracellular solute-binding proteins, family 3 LI99_RS00885 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS00890 PF00005 ABC transporter LI99_RS00895 PF00392 Bacterial regulatory proteins, gntR family LI99_RS00895 PF07729 FCD domain LI99_RS00900 PF00440 Bacterial regulatory proteins, tetR family LI99_RS00905 PF02668 Taurine catabolism dioxygenase TauD, TfdA family LI99_RS00910 PF06441 Epoxide hydrolase N terminus LI99_RS00925 PF03176 MMPL family LI99_RS00930 PF05423 Mycobacterium membrane protein LI99_RS00940 PF00583 Acetyltransferase (GNAT) family LI99_RS00945 PF03702 Anhydro-N-acetylmuramic acid kinase LI99_RS00950 PF00474 Sodium:solute symporter family LI99_RS00960 PF01380 SIS domain LI99_RS00960 PF01418 Helix-turn-helix domain, rpiR family LI99_RS00965 PF01380 SIS domain LI99_RS00970 PF01083 Cutinase LI99_RS00980 PF00296 Luciferase-like monooxygenase LI99_RS00985 PF00293 NUDIX domain LI99_RS00990 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS00995 PF03881 Fructosamine kinase LI99_RS01020 PF03992 Antibiotic biosynthesis monooxygenase LI99_RS01030 PF01757 Acyltransferase family LI99_RS01035 PF00545 ribonuclease LI99_RS01050 PF00005 ABC transporter LI99_RS01050 PF17755 UvrA DNA-binding domain LI99_RS01050 PF17760 UvrA interaction domain LI99_RS01070 PF17954 Quercetinase C-terminal cupin domain LI99_RS01070 PF02678 Pirin LI99_RS01075 PF00106 short chain dehydrogenase LI99_RS01080 PF00107 Zinc-binding dehydrogenase LI99_RS01080 PF08240 Alcohol dehydrogenase GroES-like domain LI99_RS01090 PF08281 Sigma-70, region 4 LI99_RS01090 PF04542 Sigma-70 region 2 LI99_RS01090 PF12680 SnoaL-like domain LI99_RS01095 PF12146 Serine aminopeptidase, S33 LI99_RS01115 PF01596 O-methyltransferase LI99_RS01120 PF03176 MMPL family LI99_RS01125 PF05423 Mycobacterium membrane protein LI99_RS01130 PF00440 Bacterial regulatory proteins, tetR family LI99_RS01135 PF00072 Response regulator receiver domain LI99_RS01135 PF00211 Adenylate and Guanylate cyclase catalytic domain LI99_RS01140 PF00920 Dehydratase family LI99_RS01145 PF02583 Metal-sensitive transcriptional repressor LI99_RS01150 PF01910 Thiamine-binding protein LI99_RS01155 PF07690 Major Facilitator Superfamily LI99_RS01160 PF03734 L,D-transpeptidase catalytic domain LI99_RS01160 PF17964 Bacterial Ig domain LI99_RS01165 PF01431 Peptidase family M13 LI99_RS01165 PF05649 Peptidase family M13 LI99_RS01185 PF13380 CoA binding domain LI99_RS01190 PF01053 Cys/Met metabolism PLP-dependent enzyme LI99_RS01200 PF03176 MMPL family LI99_RS01205 PF16525 Haemophore, haem-binding LI99_RS01215 PF00072 Response regulator receiver domain LI99_RS01215 PF00486 Transcriptional regulatory protein, C terminal LI99_RS01220 PF00672 HAMP domain LI99_RS01220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI99_RS01220 PF00512 His Kinase A (phospho-acceptor) domain LI99_RS01240 PF01594 AI-2E family transporter LI99_RS01245 PF03176 MMPL family LI99_RS01255 PF02390 Putative methyltransferase LI99_RS01270 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain LI99_RS01270 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain LI99_RS01280 PF13193 AMP-binding enzyme C-terminal domain LI99_RS01280 PF00501 AMP-binding enzyme LI99_RS01285 PF00378 Enoyl-CoA hydratase/isomerase LI99_RS01290 PF00106 short chain dehydrogenase LI99_RS01300 PF01575 MaoC like domain LI99_RS01320 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LI99_RS01320 PF01276 Orn/Lys/Arg decarboxylase, major domain LI99_RS01325 PF03167 Uracil DNA glycosylase superfamily LI99_RS01330 PF07859 alpha/beta hydrolase fold LI99_RS01335 PF07729 FCD domain LI99_RS01335 PF00392 Bacterial regulatory proteins, gntR family LI99_RS01355 PF00936 BMC domain LI99_RS01360 PF03319 Ethanolamine utilisation protein EutN/carboxysome LI99_RS01375 PF00171 Aldehyde dehydrogenase family LI99_RS01375 PF00465 Iron-containing alcohol dehydrogenase LI99_RS01380 PF00202 Aminotransferase class-III LI99_RS01395 PF07859 alpha/beta hydrolase fold LI99_RS01400 PF05199 GMC oxidoreductase LI99_RS01400 PF00732 GMC oxidoreductase LI99_RS01405 PF07110 EthD domain LI99_RS01410 PF00106 short chain dehydrogenase LI99_RS01415 PF02525 Flavodoxin-like fold LI99_RS01425 PF00392 Bacterial regulatory proteins, gntR family LI99_RS01425 PF07702 UTRA domain LI99_RS01430 PF01966 HD domain LI99_RS01435 PF01266 FAD dependent oxidoreductase LI99_RS01440 PF07859 alpha/beta hydrolase fold LI99_RS01445 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain LI99_RS01445 PF06974 Protein of unknown function (DUF1298) LI99_RS01470 PF00111 2Fe-2S iron-sulfur cluster binding domain LI99_RS01470 PF00175 Oxidoreductase NAD-binding domain LI99_RS01470 PF00970 Oxidoreductase FAD-binding domain LI99_RS01480 PF01979 Amidohydrolase family LI99_RS01500 PF02913 FAD linked oxidases, C-terminal domain LI99_RS01500 PF01565 FAD binding domain LI99_RS01505 PF08240 Alcohol dehydrogenase GroES-like domain LI99_RS01505 PF00107 Zinc-binding dehydrogenase LI99_RS01510 PF07859 alpha/beta hydrolase fold LI99_RS01515 PF13193 AMP-binding enzyme C-terminal domain LI99_RS01515 PF00501 AMP-binding enzyme LI99_RS01525 PF00797 N-acetyltransferase LI99_RS01540 PF00171 Aldehyde dehydrogenase family LI99_RS01545 PF08241 Methyltransferase domain LI99_RS01550 PF08323 Starch synthase catalytic domain LI99_RS01550 PF00534 Glycosyl transferases group 1 LI99_RS01555 PF01081 KDPG and KHG aldolase LI99_RS01560 PF00920 Dehydratase family LI99_RS01565 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LI99_RS01565 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LI99_RS01570 PF00480 ROK family LI99_RS01590 PF00501 AMP-binding enzyme LI99_RS01590 PF13193 AMP-binding enzyme C-terminal domain LI99_RS01595 PF02126 Phosphotriesterase family LI99_RS01620 PF00501 AMP-binding enzyme LI99_RS01620 PF13193 AMP-binding enzyme C-terminal domain LI99_RS01625 PF00171 Aldehyde dehydrogenase family LI99_RS01635 PF01613 Flavin reductase like domain LI99_RS01640 PF00196 Bacterial regulatory proteins, luxR family LI99_RS01645 PF00072 Response regulator receiver domain LI99_RS01645 PF00196 Bacterial regulatory proteins, luxR family LI99_RS01650 PF03060 Nitronate monooxygenase LI99_RS01655 PF01039 Carboxyl transferase domain LI99_RS01660 PF02785 Biotin carboxylase C-terminal domain LI99_RS01660 PF00289 Biotin carboxylase, N-terminal domain LI99_RS01660 PF00364 Biotin-requiring enzyme LI99_RS01660 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LI99_RS01665 PF00378 Enoyl-CoA hydratase/isomerase LI99_RS01670 PF08608 Wyosine base formation LI99_RS01670 PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain LI99_RS01680 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS01680 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS01680 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS01685 PF00296 Luciferase-like monooxygenase LI99_RS01690 PF00378 Enoyl-CoA hydratase/isomerase LI99_RS01695 PF00296 Luciferase-like monooxygenase LI99_RS01710 PF02405 Permease MlaE LI99_RS01715 PF02405 Permease MlaE LI99_RS01740 PF02470 MlaD protein LI99_RS01775 PF05977 Transmembrane secretion effector LI99_RS01780 PF00268 Ribonucleotide reductase, small chain LI99_RS01785 PF11847 Alpha-(1->3)-arabinofuranosyltransferase LI99_RS01790 PF11021 Protein of unknown function (DUF2613) LI99_RS01795 PF00933 Glycosyl hydrolase family 3 N terminal domain LI99_RS01825 PF00891 O-methyltransferase domain LI99_RS01845 PF01575 MaoC like domain LI99_RS01855 PF00108 Thiolase, N-terminal domain LI99_RS01855 PF02803 Thiolase, C-terminal domain LI99_RS01860 PF01565 FAD binding domain LI99_RS01860 PF02913 FAD linked oxidases, C-terminal domain LI99_RS01870 PF01965 DJ-1/PfpI family LI99_RS01880 PF02979 Nitrile hydratase, alpha chain LI99_RS01890 PF05423 Mycobacterium membrane protein LI99_RS01895 PF03176 MMPL family LI99_RS01900 PF03176 MMPL family LI99_RS01910 PF00483 Nucleotidyl transferase LI99_RS01915 PF03033 Glycosyltransferase family 28 N-terminal domain LI99_RS01920 PF01370 NAD dependent epimerase/dehydratase family LI99_RS01925 PF17843 MycE methyltransferase N-terminal LI99_RS01930 PF05711 Macrocin-O-methyltransferase (TylF) LI99_RS01935 PF03033 Glycosyltransferase family 28 N-terminal domain LI99_RS01945 PF05711 Macrocin-O-methyltransferase (TylF) LI99_RS01950 PF03033 Glycosyltransferase family 28 N-terminal domain LI99_RS01955 PF08241 Methyltransferase domain LI99_RS01975 PF03621 MbtH-like protein LI99_RS01980 PF00501 AMP-binding enzyme LI99_RS01980 PF00668 Condensation domain LI99_RS01980 PF00550 Phosphopantetheine attachment site LI99_RS01980 PF13193 AMP-binding enzyme C-terminal domain LI99_RS01985 PF00668 Condensation domain LI99_RS01985 PF00550 Phosphopantetheine attachment site LI99_RS01985 PF13193 AMP-binding enzyme C-terminal domain LI99_RS01985 PF00501 AMP-binding enzyme LI99_RS01990 PF11139 Sap, sulfolipid-1-addressing protein LI99_RS01995 PF03795 YCII-related domain LI99_RS02000 PF04542 Sigma-70 region 2 LI99_RS02000 PF08281 Sigma-70, region 4 LI99_RS02005 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS02005 PF12806 Acetyl-CoA dehydrogenase C-terminal like LI99_RS02005 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS02005 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS02015 PF08240 Alcohol dehydrogenase GroES-like domain LI99_RS02015 PF08990 Erythronolide synthase docking LI99_RS02015 PF16197 Ketoacyl-synthetase C-terminal extension LI99_RS02015 PF00109 Beta-ketoacyl synthase, N-terminal domain LI99_RS02015 PF00698 Acyl transferase domain LI99_RS02015 PF02801 Beta-ketoacyl synthase, C-terminal domain LI99_RS02015 PF00550 Phosphopantetheine attachment site LI99_RS02015 PF08659 KR domain LI99_RS02015 PF14765 Polyketide synthase dehydratase LI99_RS02020 PF00668 Condensation domain LI99_RS02025 PF03176 MMPL family LI99_RS02030 PF00501 AMP-binding enzyme LI99_RS02035 PF08237 PE-PPE domain LI99_RS02040 PF11139 Sap, sulfolipid-1-addressing protein LI99_RS02050 PF01613 Flavin reductase like domain LI99_RS02060 PF13085 2Fe-2S iron-sulfur cluster binding domain LI99_RS02060 PF13183 4Fe-4S dicluster domain LI99_RS02065 PF02910 Fumarate reductase flavoprotein C-term LI99_RS02065 PF00890 FAD binding domain LI99_RS02100 PF00155 Aminotransferase class I and II LI99_RS02100 PF00392 Bacterial regulatory proteins, gntR family LI99_RS02105 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LI99_RS02105 PF07992 Pyridine nucleotide-disulphide oxidoreductase LI99_RS02105 PF13806 Rieske-like [2Fe-2S] domain LI99_RS02105 PF18267 Rubredoxin NAD+ reductase C-terminal domain LI99_RS02105 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LI99_RS02105 PF04324 BFD-like [2Fe-2S] binding domain LI99_RS02135 PF07690 Major Facilitator Superfamily LI99_RS02140 PF00583 Acetyltransferase (GNAT) family LI99_RS02145 PF02626 Carboxyltransferase domain, subdomain A and B LI99_RS02150 PF02682 Carboxyltransferase domain, subdomain C and D LI99_RS02165 PF03601 Conserved hypothetical protein 698 LI99_RS02185 PF00795 Carbon-nitrogen hydrolase LI99_RS02190 PF04371 Porphyromonas-type peptidyl-arginine deiminase LI99_RS02200 PF13520 Amino acid permease LI99_RS02205 PF02566 OsmC-like protein LI99_RS02210 PF01047 MarR family LI99_RS02215 PF07690 Major Facilitator Superfamily LI99_RS02225 PF02447 GntP family permease LI99_RS02240 PF00171 Aldehyde dehydrogenase family LI99_RS02245 PF00521 DNA gyrase/topoisomerase IV, subunit A LI99_RS02245 PF03989 DNA gyrase C-terminal domain, beta-propeller LI99_RS02250 PF00204 DNA gyrase B LI99_RS02250 PF01751 Toprim domain LI99_RS02250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI99_RS02250 PF00986 DNA gyrase B subunit, carboxyl terminus LI99_RS02260 PF00196 Bacterial regulatory proteins, luxR family LI99_RS02260 PF00072 Response regulator receiver domain LI99_RS02270 PF01205 Uncharacterized protein family UPF0029 LI99_RS02270 PF09186 Domain of unknown function (DUF1949) LI99_RS02275 PF05423 Mycobacterium membrane protein LI99_RS02280 PF03176 MMPL family LI99_RS02285 PF00440 Bacterial regulatory proteins, tetR family LI99_RS02290 PF08543 Phosphomethylpyrimidine kinase LI99_RS02300 PF01810 LysE type translocator LI99_RS02305 PF01047 MarR family LI99_RS02305 PF00583 Acetyltransferase (GNAT) family LI99_RS02315 PF03466 LysR substrate binding domain LI99_RS02315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI99_RS02320 PF00135 Carboxylesterase family LI99_RS02330 PF00196 Bacterial regulatory proteins, luxR family LI99_RS02330 PF00072 Response regulator receiver domain LI99_RS02335 PF01380 SIS domain LI99_RS02340 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LI99_RS02340 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LI99_RS02340 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LI99_RS02345 PF00535 Glycosyl transferase family 2 LI99_RS02360 PF07729 FCD domain LI99_RS02360 PF00392 Bacterial regulatory proteins, gntR family LI99_RS02370 PF00920 Dehydratase family LI99_RS02375 PF00083 Sugar (and other) transporter LI99_RS02375 PF07690 Major Facilitator Superfamily LI99_RS02380 PF03069 Acetamidase/Formamidase family LI99_RS02385 PF01425 Amidase LI99_RS02395 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS02400 PF00005 ABC transporter LI99_RS02405 PF02515 CoA-transferase family III LI99_RS02410 PF00378 Enoyl-CoA hydratase/isomerase LI99_RS02415 PF00356 Bacterial regulatory proteins, lacI family LI99_RS02435 PF08841 Diol dehydratase reactivase ATPase-like domain LI99_RS02435 PF18427 DD-reactivating factor swiveling domain LI99_RS02445 PF02286 Dehydratase large subunit LI99_RS02465 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LI99_RS02470 PF02056 Family 4 glycosyl hydrolase LI99_RS02470 PF11975 Family 4 glycosyl hydrolase C-terminal domain LI99_RS02475 PF00455 DeoR C terminal sensor domain LI99_RS02475 PF08220 DeoR-like helix-turn-helix domain LI99_RS02490 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS02495 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS02500 PF00005 ABC transporter LI99_RS02500 PF17912 MalK OB fold domain LI99_RS02505 PF08220 DeoR-like helix-turn-helix domain LI99_RS02505 PF00455 DeoR C terminal sensor domain LI99_RS02510 PF08013 Tagatose 6 phosphate kinase LI99_RS02515 PF01380 SIS domain LI99_RS02530 PF11975 Family 4 glycosyl hydrolase C-terminal domain LI99_RS02530 PF02056 Family 4 glycosyl hydrolase LI99_RS02535 PF01547 Bacterial extracellular solute-binding protein LI99_RS02540 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS02545 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS02550 PF08402 TOBE domain LI99_RS02550 PF00005 ABC transporter LI99_RS02560 PF09203 MspA LI99_RS02580 PF00106 short chain dehydrogenase LI99_RS02590 PF05199 GMC oxidoreductase LI99_RS02590 PF00732 GMC oxidoreductase LI99_RS02605 PF13191 AAA ATPase domain LI99_RS02605 PF00069 Protein kinase domain LI99_RS02615 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS02615 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS02615 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS02620 PF00440 Bacterial regulatory proteins, tetR family LI99_RS02635 PF00392 Bacterial regulatory proteins, gntR family LI99_RS02635 PF07729 FCD domain LI99_RS02640 PF01965 DJ-1/PfpI family LI99_RS02645 PF17240 Family of unknown function (DUF5313) LI99_RS02650 PF01047 MarR family LI99_RS02655 PF00027 Cyclic nucleotide-binding domain LI99_RS02655 PF13545 Crp-like helix-turn-helix domain LI99_RS02680 PF03466 LysR substrate binding domain LI99_RS02680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI99_RS02690 PF00211 Adenylate and Guanylate cyclase catalytic domain LI99_RS02700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI99_RS02700 PF03466 LysR substrate binding domain LI99_RS02710 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS02715 PF09084 NMT1/THI5 like LI99_RS02720 PF00005 ABC transporter LI99_RS02735 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS02740 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS02745 PF00005 ABC transporter LI99_RS02745 PF08402 TOBE domain LI99_RS02760 PF00313 'Cold-shock' DNA-binding domain LI99_RS02780 PF05661 Protein of unknown function (DUF808) LI99_RS02785 PF00860 Permease family LI99_RS02790 PF00534 Glycosyl transferases group 1 LI99_RS02790 PF13439 Glycosyltransferase Family 4 LI99_RS02795 PF00795 Carbon-nitrogen hydrolase LI99_RS02800 PF02769 AIR synthase related protein, C-terminal domain LI99_RS02800 PF00586 AIR synthase related protein, N-terminal domain LI99_RS02820 PF00795 Carbon-nitrogen hydrolase LI99_RS02830 PF04542 Sigma-70 region 2 LI99_RS02830 PF08281 Sigma-70, region 4 LI99_RS02835 PF04542 Sigma-70 region 2 LI99_RS02835 PF08281 Sigma-70, region 4 LI99_RS02840 PF05423 Mycobacterium membrane protein LI99_RS02845 PF03176 MMPL family LI99_RS02855 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS02855 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS02855 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS02870 PF00202 Aminotransferase class-III LI99_RS02875 PF00171 Aldehyde dehydrogenase family LI99_RS02885 PF02515 CoA-transferase family III LI99_RS02890 PF01740 STAS domain LI99_RS02895 PF05336 L-rhamnose mutarotase LI99_RS02900 PF07690 Major Facilitator Superfamily LI99_RS02910 PF00596 Class II Aldolase and Adducin N-terminal domain LI99_RS02915 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LI99_RS02915 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LI99_RS02920 PF00356 Bacterial regulatory proteins, lacI family LI99_RS02925 PF02589 LUD domain LI99_RS02930 PF02589 LUD domain LI99_RS02930 PF11870 Domain of unknown function (DUF3390) LI99_RS02930 PF13183 4Fe-4S dicluster domain LI99_RS02935 PF02754 Cysteine-rich domain LI99_RS02940 PF07729 FCD domain LI99_RS02940 PF00392 Bacterial regulatory proteins, gntR family LI99_RS02955 PF13193 AMP-binding enzyme C-terminal domain LI99_RS02955 PF00501 AMP-binding enzyme LI99_RS02960 PF00106 short chain dehydrogenase LI99_RS02970 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS02970 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS02970 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS02975 PF01842 ACT domain LI99_RS02975 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LI99_RS02975 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LI99_RS02990 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LI99_RS02995 PF04072 Leucine carboxyl methyltransferase LI99_RS03005 PF00753 Metallo-beta-lactamase superfamily LI99_RS03010 PF00135 Carboxylesterase family LI99_RS03020 PF09995 Uncharacterized protein conserved in bacteria (DUF2236) LI99_RS03025 PF04072 Leucine carboxyl methyltransferase LI99_RS03030 PF17866 AAA lid domain LI99_RS03030 PF00004 ATPase family associated with various cellular activities (AAA) LI99_RS03035 PF05108 Type VII secretion system ESX-1, transport TM domain B LI99_RS03040 PF01580 FtsK/SpoIIIE family LI99_RS03045 PF00934 PE family LI99_RS03050 PF00823 PPE family LI99_RS03060 PF06013 Proteins of 100 residues with WXG LI99_RS03065 PF14011 EspG family LI99_RS03070 PF08817 WXG100 protein secretion system (Wss), protein YukD LI99_RS03075 PF00082 Subtilase family LI99_RS03080 PF11203 Putative type VII ESX secretion system translocon, EccE LI99_RS03090 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase LI99_RS03105 PF09037 Stf0 sulphotransferase LI99_RS03110 PF00884 Sulfatase LI99_RS03120 PF01569 PAP2 superfamily LI99_RS03140 PF00355 Rieske [2Fe-2S] domain LI99_RS03150 PF00005 ABC transporter LI99_RS03150 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LI99_RS03155 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LI99_RS03155 PF00005 ABC transporter LI99_RS03160 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS03165 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS03165 PF12911 N-terminal TM domain of oligopeptide transport permease C LI99_RS03170 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LI99_RS03185 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS03190 PF00005 ABC transporter LI99_RS03200 PF07702 UTRA domain LI99_RS03200 PF00392 Bacterial regulatory proteins, gntR family LI99_RS03235 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LI99_RS03235 PF00355 Rieske [2Fe-2S] domain LI99_RS03240 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS03245 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS03255 PF00202 Aminotransferase class-III LI99_RS03260 PF00005 ABC transporter LI99_RS03260 PF08402 TOBE domain LI99_RS03265 PF13977 BetI-type transcriptional repressor, C-terminal LI99_RS03265 PF00440 Bacterial regulatory proteins, tetR family LI99_RS03280 PF01266 FAD dependent oxidoreductase LI99_RS03285 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS03285 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS03285 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS03295 PF07992 Pyridine nucleotide-disulphide oxidoreductase LI99_RS03305 PF13823 Alcohol dehydrogenase GroES-associated LI99_RS03305 PF08240 Alcohol dehydrogenase GroES-like domain LI99_RS03305 PF00107 Zinc-binding dehydrogenase LI99_RS03320 PF03734 L,D-transpeptidase catalytic domain LI99_RS03320 PF17964 Bacterial Ig domain LI99_RS03325 PF00067 Cytochrome P450 LI99_RS03340 PF00692 dUTPase LI99_RS03350 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LI99_RS03350 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LI99_RS03350 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LI99_RS03355 PF00067 Cytochrome P450 LI99_RS03370 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LI99_RS03370 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LI99_RS03375 PF00941 FAD binding domain in molybdopterin dehydrogenase LI99_RS03375 PF03450 CO dehydrogenase flavoprotein C-terminal domain LI99_RS03380 PF10518 TAT (twin-arginine translocation) pathway signal sequence LI99_RS03380 PF00111 2Fe-2S iron-sulfur cluster binding domain LI99_RS03380 PF01799 [2Fe-2S] binding domain LI99_RS03390 PF00155 Aminotransferase class I and II LI99_RS03400 PF02754 Cysteine-rich domain LI99_RS03400 PF02665 Nitrate reductase gamma subunit LI99_RS03400 PF13183 4Fe-4S dicluster domain LI99_RS03425 PF00350 Dynamin family LI99_RS03440 PF00350 Dynamin family LI99_RS03475 PF07690 Major Facilitator Superfamily LI99_RS03480 PF03737 Aldolase/RraA LI99_RS03485 PF00180 Isocitrate/isopropylmalate dehydrogenase LI99_RS03485 PF03737 Aldolase/RraA LI99_RS03490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI99_RS03490 PF03466 LysR substrate binding domain LI99_RS03495 PF00012 Hsp70 protein LI99_RS03500 PF01025 GrpE LI99_RS03505 PF00684 DnaJ central domain LI99_RS03505 PF01556 DnaJ C terminal domain LI99_RS03505 PF00226 DnaJ domain LI99_RS03510 PF13411 MerR HTH family regulatory protein LI99_RS03520 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS03520 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS03520 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS03530 PF07690 Major Facilitator Superfamily LI99_RS03530 PF00083 Sugar (and other) transporter LI99_RS03535 PF00501 AMP-binding enzyme LI99_RS03535 PF13193 AMP-binding enzyme C-terminal domain LI99_RS03535 PF16177 Acetyl-coenzyme A synthetase N-terminus LI99_RS03600 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase LI99_RS03610 PF17871 AAA lid domain LI99_RS03610 PF02861 Clp amino terminal domain, pathogenicity island component LI99_RS03610 PF07724 AAA domain (Cdc48 subfamily) LI99_RS03610 PF10431 C-terminal, D2-small domain, of ClpB protein LI99_RS03610 PF00004 ATPase family associated with various cellular activities (AAA) LI99_RS03615 PF01113 Dihydrodipicolinate reductase, N-terminus LI99_RS03615 PF05173 Dihydrodipicolinate reductase, C-terminus LI99_RS03620 PF00355 Rieske [2Fe-2S] domain LI99_RS03635 PF00106 short chain dehydrogenase LI99_RS03660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI99_RS03660 PF03466 LysR substrate binding domain LI99_RS03670 PF00941 FAD binding domain in molybdopterin dehydrogenase LI99_RS03670 PF03450 CO dehydrogenase flavoprotein C-terminal domain LI99_RS03675 PF00111 2Fe-2S iron-sulfur cluster binding domain LI99_RS03675 PF01799 [2Fe-2S] binding domain LI99_RS03680 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LI99_RS03680 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LI99_RS03685 PF13478 XdhC Rossmann domain LI99_RS03685 PF02625 XdhC and CoxI family LI99_RS03705 PF09335 SNARE associated Golgi protein LI99_RS03710 PF01116 Fructose-bisphosphate aldolase class-II LI99_RS03725 PF01545 Cation efflux family LI99_RS03745 PF00709 Adenylosuccinate synthetase LI99_RS03755 PF06902 Divergent 4Fe-4S mono-cluster LI99_RS03760 PF00067 Cytochrome P450 LI99_RS03765 PF03176 MMPL family LI99_RS03770 PF00999 Sodium/hydrogen exchanger family LI99_RS03780 PF01370 NAD dependent epimerase/dehydratase family LI99_RS03780 PF02222 ATP-grasp domain LI99_RS03795 PF01053 Cys/Met metabolism PLP-dependent enzyme LI99_RS03805 PF00106 short chain dehydrogenase LI99_RS03820 PF00296 Luciferase-like monooxygenase LI99_RS03830 PF12706 Beta-lactamase superfamily domain LI99_RS03835 PF00296 Luciferase-like monooxygenase LI99_RS03840 PF00392 Bacterial regulatory proteins, gntR family LI99_RS03860 PF00202 Aminotransferase class-III LI99_RS03865 PF01515 Phosphate acetyl/butaryl transferase LI99_RS03865 PF07085 DRTGG domain LI99_RS03870 PF00871 Acetokinase family LI99_RS03880 PF00069 Protein kinase domain LI99_RS03880 PF16919 Protein kinase G rubredoxin domain LI99_RS03880 PF16918 Protein kinase G tetratricopeptide repeat LI99_RS03885 PF00497 Bacterial extracellular solute-binding proteins, family 3 LI99_RS03895 PF00293 NUDIX domain LI99_RS03900 PF02581 Thiamine monophosphate synthase LI99_RS03905 PF05690 Thiazole biosynthesis protein ThiG LI99_RS03905 PF01266 FAD dependent oxidoreductase LI99_RS03915 PF05690 Thiazole biosynthesis protein ThiG LI99_RS03920 PF13472 GDSL-like Lipase/Acylhydrolase family LI99_RS03925 PF00005 ABC transporter LI99_RS03980 PF04389 Peptidase family M28 LI99_RS03980 PF02225 PA domain LI99_RS03985 PF04389 Peptidase family M28 LI99_RS03985 PF02225 PA domain LI99_RS03990 PF00195 Chalcone and stilbene synthases, N-terminal domain LI99_RS03990 PF02797 Chalcone and stilbene synthases, C-terminal domain LI99_RS04000 PF01494 FAD binding domain LI99_RS04005 PF00860 Permease family LI99_RS04010 PF13520 Amino acid permease LI99_RS04020 PF00440 Bacterial regulatory proteins, tetR family LI99_RS04030 PF00743 Flavin-binding monooxygenase-like LI99_RS04035 PF03466 LysR substrate binding domain LI99_RS04035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI99_RS04040 PF08946 Osmosensory transporter coiled coil LI99_RS04040 PF00083 Sugar (and other) transporter LI99_RS04045 PF01546 Peptidase family M20/M25/M40 LI99_RS04050 PF01425 Amidase LI99_RS04060 PF00067 Cytochrome P450 LI99_RS04075 PF08543 Phosphomethylpyrimidine kinase LI99_RS04080 PF13667 ThiC-associated domain LI99_RS04080 PF01964 Radical SAM ThiC family LI99_RS04085 PF07690 Major Facilitator Superfamily LI99_RS04090 PF09167 Domain of unknown function (DUF1942) LI99_RS04110 PF01327 Polypeptide deformylase LI99_RS04125 PF00080 Copper/zinc superoxide dismutase (SODC) LI99_RS04130 PF04107 Glutamate-cysteine ligase family 2(GCS2) LI99_RS04140 PF01037 Lrp/AsnC ligand binding domain LI99_RS04160 PF03334 Na+/H+ antiporter subunit LI99_RS04165 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) LI99_RS04175 PF00361 Proton-conducting membrane transporter LI99_RS04185 PF13244 Domain of unknown function (DUF4040) LI99_RS04185 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LI99_RS04185 PF00361 Proton-conducting membrane transporter LI99_RS04185 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter LI99_RS04190 PF01494 FAD binding domain LI99_RS04200 PF03600 Citrate transporter LI99_RS04215 PF00672 HAMP domain LI99_RS04215 PF07730 Histidine kinase LI99_RS04215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI99_RS04220 PF00196 Bacterial regulatory proteins, luxR family LI99_RS04220 PF00072 Response regulator receiver domain LI99_RS04240 PF17862 AAA+ lid domain LI99_RS04240 PF00004 ATPase family associated with various cellular activities (AAA) LI99_RS04240 PF01434 Peptidase family M41 LI99_RS04245 PF01066 CDP-alcohol phosphatidyltransferase LI99_RS04250 PF02666 Phosphatidylserine decarboxylase LI99_RS04255 PF00994 Probable molybdopterin binding domain LI99_RS04255 PF03454 MoeA C-terminal region (domain IV) LI99_RS04255 PF03453 MoeA N-terminal region (domain I and II) LI99_RS04275 PF13344 Haloacid dehalogenase-like hydrolase LI99_RS04280 PF04851 Type III restriction enzyme, res subunit LI99_RS04285 PF00300 Histidine phosphatase superfamily (branch 1) LI99_RS04285 PF00934 PE family LI99_RS04295 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LI99_RS04295 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LI99_RS04300 PF03450 CO dehydrogenase flavoprotein C-terminal domain LI99_RS04300 PF00941 FAD binding domain in molybdopterin dehydrogenase LI99_RS04305 PF10518 TAT (twin-arginine translocation) pathway signal sequence LI99_RS04305 PF01799 [2Fe-2S] binding domain LI99_RS04305 PF00111 2Fe-2S iron-sulfur cluster binding domain LI99_RS04315 PF07729 FCD domain LI99_RS04315 PF00392 Bacterial regulatory proteins, gntR family LI99_RS04320 PF07690 Major Facilitator Superfamily LI99_RS04325 PF00701 Dihydrodipicolinate synthetase family LI99_RS04345 PF00118 TCP-1/cpn60 chaperonin family LI99_RS04360 PF07969 Amidohydrolase family LI99_RS04375 PF00069 Protein kinase domain LI99_RS04390 PF00171 Aldehyde dehydrogenase family LI99_RS04400 PF03976 Polyphosphate kinase 2 (PPK2) LI99_RS04420 PF00392 Bacterial regulatory proteins, gntR family LI99_RS04420 PF07729 FCD domain LI99_RS04425 PF07690 Major Facilitator Superfamily LI99_RS04425 PF00083 Sugar (and other) transporter LI99_RS04435 PF01116 Fructose-bisphosphate aldolase class-II LI99_RS04440 PF00326 Prolyl oligopeptidase family LI99_RS04440 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LI99_RS04445 PF00171 Aldehyde dehydrogenase family LI99_RS04460 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LI99_RS04460 PF07992 Pyridine nucleotide-disulphide oxidoreductase LI99_RS04475 PF09856 Predicted transcriptional regulator (DUF2083) LI99_RS04475 PF01381 Helix-turn-helix LI99_RS04475 PF06114 IrrE N-terminal-like domain LI99_RS04490 PF01643 Acyl-ACP thioesterase LI99_RS04495 PF00463 Isocitrate lyase family LI99_RS04500 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LI99_RS04500 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LI99_RS04515 PF03976 Polyphosphate kinase 2 (PPK2) LI99_RS04525 PF04286 Protein of unknown function (DUF445) LI99_RS04530 PF01381 Helix-turn-helix LI99_RS04540 PF10724 Protein of unknown function (DUF2516) LI99_RS04545 PF10783 Protein of unknown function (DUF2599) LI99_RS04550 PF01791 DeoC/LacD family aldolase LI99_RS04555 PF11209 Protein of unknown function (DUF2993) LI99_RS04560 PF00795 Carbon-nitrogen hydrolase LI99_RS04575 PF10698 Protein of unknown function (DUF2505) LI99_RS04580 PF01565 FAD binding domain LI99_RS04580 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LI99_RS04585 PF03734 L,D-transpeptidase catalytic domain LI99_RS04585 PF17964 Bacterial Ig domain LI99_RS04590 PF00106 short chain dehydrogenase LI99_RS04595 PF00480 ROK family LI99_RS04600 PF00534 Glycosyl transferases group 1 LI99_RS04600 PF13439 Glycosyltransferase Family 4 LI99_RS04605 PF10722 Putative bacterial sensory transduction regulator LI99_RS04610 PF00300 Histidine phosphatase superfamily (branch 1) LI99_RS04615 PF00512 His Kinase A (phospho-acceptor) domain LI99_RS04615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI99_RS04620 PF00072 Response regulator receiver domain LI99_RS04620 PF00486 Transcriptional regulatory protein, C terminal LI99_RS04630 PF02541 Ppx/GppA phosphatase family LI99_RS04640 PF01261 Xylose isomerase-like TIM barrel LI99_RS04650 PF03807 NADP oxidoreductase coenzyme F420-dependent LI99_RS04650 PF14748 Pyrroline-5-carboxylate reductase dimerisation LI99_RS04655 PF12728 Helix-turn-helix domain LI99_RS04660 PF08213 Mitochondrial domain of unknown function (DUF1713) LI99_RS04665 PF01370 NAD dependent epimerase/dehydratase family LI99_RS04670 PF01553 Acyltransferase LI99_RS04675 PF13452 N-terminal half of MaoC dehydratase LI99_RS04685 PF05768 Glutaredoxin-like domain (DUF836) LI99_RS04690 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LI99_RS04690 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LI99_RS04690 PF01488 Shikimate / quinate 5-dehydrogenase LI99_RS04695 PF03900 Porphobilinogen deaminase, C-terminal domain LI99_RS04695 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LI99_RS04705 PF00490 Delta-aminolevulinic acid dehydratase LI99_RS04735 PF00440 Bacterial regulatory proteins, tetR family LI99_RS04750 PF09203 MspA LI99_RS04765 PF00067 Cytochrome P450 LI99_RS04770 PF00202 Aminotransferase class-III LI99_RS04775 PF00300 Histidine phosphatase superfamily (branch 1) LI99_RS04785 PF02683 Cytochrome C biogenesis protein transmembrane region LI99_RS04795 PF01578 Cytochrome C assembly protein LI99_RS04800 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LI99_RS04825 PF05384 Sensor protein DegS LI99_RS04825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI99_RS04825 PF07730 Histidine kinase LI99_RS04830 PF01339 CheB methylesterase LI99_RS04830 PF00072 Response regulator receiver domain LI99_RS04835 PF16868 NMT1-like family LI99_RS04845 PF00072 Response regulator receiver domain LI99_RS04845 PF00196 Bacterial regulatory proteins, luxR family LI99_RS04850 PF00083 Sugar (and other) transporter LI99_RS04865 PF01040 UbiA prenyltransferase family LI99_RS04875 PF01048 Phosphorylase superfamily LI99_RS04880 PF16363 GDP-mannose 4,6 dehydratase LI99_RS04885 PF03060 Nitronate monooxygenase LI99_RS04890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI99_RS04890 PF00512 His Kinase A (phospho-acceptor) domain LI99_RS04895 PF00072 Response regulator receiver domain LI99_RS04895 PF00486 Transcriptional regulatory protein, C terminal LI99_RS04900 PF00535 Glycosyl transferase family 2 LI99_RS04945 PF13649 Methyltransferase domain LI99_RS04965 PF00067 Cytochrome P450 LI99_RS04975 PF00106 short chain dehydrogenase LI99_RS04980 PF00245 Alkaline phosphatase LI99_RS04990 PF00817 impB/mucB/samB family LI99_RS04990 PF11799 impB/mucB/samB family C-terminal domain LI99_RS05000 PF03358 NADPH-dependent FMN reductase LI99_RS05015 PF02867 Ribonucleotide reductase, barrel domain LI99_RS05015 PF00317 Ribonucleotide reductase, all-alpha domain LI99_RS05015 PF08343 Ribonucleotide reductase N-terminal LI99_RS05060 PF00296 Luciferase-like monooxygenase LI99_RS05065 PF01494 FAD binding domain LI99_RS05070 PF00440 Bacterial regulatory proteins, tetR family LI99_RS05075 PF00743 Flavin-binding monooxygenase-like LI99_RS05090 PF00268 Ribonucleotide reductase, small chain LI99_RS05115 PF00107 Zinc-binding dehydrogenase LI99_RS05115 PF08240 Alcohol dehydrogenase GroES-like domain LI99_RS05145 PF00155 Aminotransferase class I and II LI99_RS05145 PF00392 Bacterial regulatory proteins, gntR family LI99_RS05160 PF00005 ABC transporter LI99_RS05170 PF00378 Enoyl-CoA hydratase/isomerase LI99_RS05175 PF08241 Methyltransferase domain LI99_RS05180 PF18096 THUMP domain-like LI99_RS05185 PF11738 Protein of unknown function (DUF3298) LI99_RS05190 PF01235 Sodium:alanine symporter family LI99_RS05200 PF13360 PQQ-like domain LI99_RS05205 PF00132 Bacterial transferase hexapeptide (six repeats) LI99_RS05215 PF01070 FMN-dependent dehydrogenase LI99_RS05240 PF13193 AMP-binding enzyme C-terminal domain LI99_RS05240 PF00501 AMP-binding enzyme LI99_RS05250 PF01384 Phosphate transporter family LI99_RS05270 PF13556 PucR C-terminal helix-turn-helix domain LI99_RS05270 PF17853 GGDEF-like domain LI99_RS05290 PF00491 Arginase family LI99_RS05295 PF01522 Polysaccharide deacetylase LI99_RS05300 PF00106 short chain dehydrogenase LI99_RS05305 PF00378 Enoyl-CoA hydratase/isomerase LI99_RS05320 PF13419 Haloacid dehalogenase-like hydrolase LI99_RS05340 PF00196 Bacterial regulatory proteins, luxR family LI99_RS05345 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LI99_RS05350 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS05355 PF12911 N-terminal TM domain of oligopeptide transport permease C LI99_RS05355 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS05360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LI99_RS05360 PF00005 ABC transporter LI99_RS05365 PF00005 ABC transporter LI99_RS05365 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LI99_RS05370 PF01425 Amidase LI99_RS05380 PF01425 Amidase LI99_RS05385 PF02814 UreE urease accessory protein, N-terminal domain LI99_RS05390 PF01730 UreF LI99_RS05395 PF00699 Urease beta subunit LI99_RS05395 PF00547 Urease, gamma subunit LI99_RS05400 PF00449 Urease alpha-subunit, N-terminal domain LI99_RS05400 PF01979 Amidohydrolase family LI99_RS05405 PF02492 CobW/HypB/UreG, nucleotide-binding domain LI99_RS05410 PF01774 UreD urease accessory protein LI99_RS05420 PF00501 AMP-binding enzyme LI99_RS05420 PF13193 AMP-binding enzyme C-terminal domain LI99_RS05440 PF01979 Amidohydrolase family LI99_RS05445 PF18374 Enolase N-terminal domain-like LI99_RS05445 PF13378 Enolase C-terminal domain-like LI99_RS05460 PF12833 Helix-turn-helix domain LI99_RS05460 PF01965 DJ-1/PfpI family LI99_RS05465 PF01965 DJ-1/PfpI family LI99_RS05470 PF12697 Alpha/beta hydrolase family LI99_RS05475 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LI99_RS05490 PF13439 Glycosyltransferase Family 4 LI99_RS05490 PF00534 Glycosyl transferases group 1 LI99_RS05495 PF00330 Aconitase family (aconitate hydratase) LI99_RS05500 PF00106 short chain dehydrogenase LI99_RS05505 PF01209 ubiE/COQ5 methyltransferase family LI99_RS05510 PF00120 Glutamine synthetase, catalytic domain LI99_RS05515 PF00392 Bacterial regulatory proteins, gntR family LI99_RS05515 PF07729 FCD domain LI99_RS05525 PF07722 Peptidase C26 LI99_RS05530 PF00795 Carbon-nitrogen hydrolase LI99_RS05540 PF07683 Cobalamin synthesis protein cobW C-terminal domain LI99_RS05540 PF02492 CobW/HypB/UreG, nucleotide-binding domain LI99_RS05545 PF00037 4Fe-4S binding domain LI99_RS05570 PF01266 FAD dependent oxidoreductase LI99_RS05585 PF01494 FAD binding domain LI99_RS05590 PF00348 Polyprenyl synthetase LI99_RS05595 PF01435 Peptidase family M48 LI99_RS05615 PF00107 Zinc-binding dehydrogenase LI99_RS05615 PF08240 Alcohol dehydrogenase GroES-like domain LI99_RS05620 PF01381 Helix-turn-helix LI99_RS05620 PF08671 Anti-repressor SinI LI99_RS05625 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LI99_RS05625 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LI99_RS05635 PF02405 Permease MlaE LI99_RS05685 PF07690 Major Facilitator Superfamily LI99_RS05690 PF14537 Cytochrome c3 LI99_RS05690 PF00890 FAD binding domain LI99_RS05695 PF02515 CoA-transferase family III LI99_RS05700 PF00378 Enoyl-CoA hydratase/isomerase LI99_RS05715 PF00171 Aldehyde dehydrogenase family LI99_RS05720 PF09084 NMT1/THI5 like LI99_RS05725 PF00005 ABC transporter LI99_RS05730 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS05735 PF00296 Luciferase-like monooxygenase LI99_RS05755 PF04461 Protein of unknown function (DUF520) LI99_RS05765 PF00067 Cytochrome P450 LI99_RS05785 PF01451 Low molecular weight phosphotyrosine protein phosphatase LI99_RS05790 PF01758 Sodium Bile acid symporter family LI99_RS05795 PF01022 Bacterial regulatory protein, arsR family LI99_RS05800 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LI99_RS05805 PF01022 Bacterial regulatory protein, arsR family LI99_RS05815 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LI99_RS05825 PF01175 Urocanase Rossmann-like domain LI99_RS05825 PF17392 Urocanase C-terminal domain LI99_RS05825 PF17391 Urocanase N-terminal domain LI99_RS05830 PF07687 Peptidase dimerisation domain LI99_RS05830 PF01546 Peptidase family M20/M25/M40 LI99_RS05835 PF01979 Amidohydrolase family LI99_RS05840 PF01979 Amidohydrolase family LI99_RS05845 PF00221 Aromatic amino acid lyase LI99_RS05850 PF01083 Cutinase LI99_RS05865 PF07969 Amidohydrolase family LI99_RS05880 PF00069 Protein kinase domain LI99_RS05895 PF05731 TROVE domain LI99_RS05910 PF00271 Helicase conserved C-terminal domain LI99_RS05910 PF00176 SNF2 family N-terminal domain LI99_RS05915 PF00072 Response regulator receiver domain LI99_RS05915 PF00196 Bacterial regulatory proteins, luxR family LI99_RS05930 PF00069 Protein kinase domain LI99_RS05930 PF08450 SMP-30/Gluconolactonase/LRE-like region LI99_RS05930 PF01436 NHL repeat LI99_RS05945 PF02801 Beta-ketoacyl synthase, C-terminal domain LI99_RS05945 PF00109 Beta-ketoacyl synthase, N-terminal domain LI99_RS05985 PF00487 Fatty acid desaturase LI99_RS05995 PF00067 Cytochrome P450 LI99_RS06000 PF07995 Glucose / Sorbosone dehydrogenase LI99_RS06015 PF00005 ABC transporter LI99_RS06020 PF12399 Branched-chain amino acid ATP-binding cassette transporter LI99_RS06020 PF00005 ABC transporter LI99_RS06025 PF02653 Branched-chain amino acid transport system / permease component LI99_RS06025 PF11862 Domain of unknown function (DUF3382) LI99_RS06060 PF03781 Sulfatase-modifying factor enzyme 1 LI99_RS06065 PF07702 UTRA domain LI99_RS06065 PF00392 Bacterial regulatory proteins, gntR family LI99_RS06070 PF00884 Sulfatase LI99_RS06070 PF16385 Domain of unknown function LI99_RS06075 PF00204 DNA gyrase B LI99_RS06075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI99_RS06075 PF01751 Toprim domain LI99_RS06075 PF00986 DNA gyrase B subunit, carboxyl terminus LI99_RS06080 PF02656 Domain of unknown function (DUF202) LI99_RS06085 PF02656 Domain of unknown function (DUF202) LI99_RS06100 PF00005 ABC transporter LI99_RS06105 PF00916 Sulfate permease family LI99_RS06105 PF01740 STAS domain LI99_RS06120 PF04851 Type III restriction enzyme, res subunit LI99_RS06120 PF00271 Helicase conserved C-terminal domain LI99_RS06135 PF00266 Aminotransferase class-V LI99_RS06185 PF13195 Protein of unknown function (DUF4011) LI99_RS06185 PF13086 AAA domain LI99_RS06185 PF13086 AAA domain LI99_RS06185 PF13087 AAA domain LI99_RS06185 PF13087 AAA domain LI99_RS06185 PF13195 Protein of unknown function (DUF4011) LI99_RS06195 PF00270 DEAD/DEAH box helicase LI99_RS06195 PF00271 Helicase conserved C-terminal domain LI99_RS06260 PF00149 Calcineurin-like phosphoesterase LI99_RS06275 PF03747 ADP-ribosylglycohydrolase LI99_RS06305 PF02661 Fic/DOC family LI99_RS06310 PF11855 Protein of unknown function (DUF3375) LI99_RS06330 PF07704 Rv0623-like transcription factor LI99_RS06335 PF01850 PIN domain LI99_RS06340 PF07517 SecA DEAD-like domain LI99_RS06340 PF01043 SecA preprotein cross-linking domain LI99_RS06340 PF02810 SEC-C motif LI99_RS06340 PF07516 SecA Wing and Scaffold domain LI99_RS06365 PF00920 Dehydratase family LI99_RS06370 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LI99_RS06370 PF01799 [2Fe-2S] binding domain LI99_RS06370 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LI99_RS06380 PF00860 Permease family LI99_RS06390 PF00576 HIUase/Transthyretin family LI99_RS06395 PF01014 Uricase LI99_RS06400 PF01979 Amidohydrolase family LI99_RS06405 PF01979 Amidohydrolase family LI99_RS06435 PF00248 Aldo/keto reductase family LI99_RS06445 PF00171 Aldehyde dehydrogenase family LI99_RS06455 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain LI99_RS06455 PF02129 X-Pro dipeptidyl-peptidase (S15 family) LI99_RS06470 PF03169 OPT oligopeptide transporter protein LI99_RS06485 PF00924 Mechanosensitive ion channel LI99_RS06495 PF16658 Class II release factor RF3, C-terminal domain LI99_RS06495 PF00009 Elongation factor Tu GTP binding domain LI99_RS06505 PF01522 Polysaccharide deacetylase LI99_RS06510 PF17645 Arylmalonate decarboxylase LI99_RS06515 PF07690 Major Facilitator Superfamily LI99_RS06525 PF17964 Bacterial Ig domain LI99_RS06525 PF03734 L,D-transpeptidase catalytic domain LI99_RS06545 PF13538 UvrD-like helicase C-terminal domain LI99_RS06550 PF12705 PD-(D/E)XK nuclease superfamily LI99_RS06550 PF00580 UvrD/REP helicase N-terminal domain LI99_RS06550 PF13361 UvrD-like helicase C-terminal domain LI99_RS06555 PF17946 RecC C-terminal domain LI99_RS06560 PF07690 Major Facilitator Superfamily LI99_RS06585 PF00753 Metallo-beta-lactamase superfamily LI99_RS06585 PF16123 Hydroxyacylglutathione hydrolase C-terminus LI99_RS06590 PF02082 Transcriptional regulator LI99_RS06595 PF00970 Oxidoreductase FAD-binding domain LI99_RS06595 PF00042 Globin LI99_RS06595 PF00175 Oxidoreductase NAD-binding domain LI99_RS06610 PF00471 Ribosomal protein L33 LI99_RS06615 PF13452 N-terminal half of MaoC dehydratase LI99_RS06620 PF01575 MaoC like domain LI99_RS06625 PF13452 N-terminal half of MaoC dehydratase LI99_RS06635 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LI99_RS06640 PF02357 Transcription termination factor nusG LI99_RS06645 PF00298 Ribosomal protein L11, RNA binding domain LI99_RS06645 PF03946 Ribosomal protein L11, N-terminal domain LI99_RS06650 PF00687 Ribosomal protein L1p/L10e family LI99_RS06655 PF08281 Sigma-70, region 4 LI99_RS06655 PF04542 Sigma-70 region 2 LI99_RS06675 PF00561 alpha/beta hydrolase fold LI99_RS06680 PF03109 ABC1 family LI99_RS06695 PF04978 Protein of unknown function (DUF664) LI99_RS06730 PF00480 ROK family LI99_RS06735 PF00466 Ribosomal protein L10 LI99_RS06740 PF00542 Ribosomal protein L7/L12 C-terminal domain LI99_RS06740 PF16320 Ribosomal protein L7/L12 dimerisation domain LI99_RS06745 PF00005 ABC transporter LI99_RS06750 PF04561 RNA polymerase Rpb2, domain 2 LI99_RS06750 PF04563 RNA polymerase beta subunit LI99_RS06750 PF04565 RNA polymerase Rpb2, domain 3 LI99_RS06750 PF04560 RNA polymerase Rpb2, domain 7 LI99_RS06750 PF00562 RNA polymerase Rpb2, domain 6 LI99_RS06750 PF10385 RNA polymerase beta subunit external 1 domain LI99_RS06755 PF04998 RNA polymerase Rpb1, domain 5 LI99_RS06755 PF05000 RNA polymerase Rpb1, domain 4 LI99_RS06755 PF04983 RNA polymerase Rpb1, domain 3 LI99_RS06755 PF00623 RNA polymerase Rpb1, domain 2 LI99_RS06755 PF04997 RNA polymerase Rpb1, domain 1 LI99_RS06760 PF00356 Bacterial regulatory proteins, lacI family LI99_RS06765 PF00107 Zinc-binding dehydrogenase LI99_RS06765 PF08240 Alcohol dehydrogenase GroES-like domain LI99_RS06770 PF01238 Phosphomannose isomerase type I LI99_RS06775 PF00005 ABC transporter LI99_RS06780 PF02653 Branched-chain amino acid transport system / permease component LI99_RS06790 PF01116 Fructose-bisphosphate aldolase class-II LI99_RS06795 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LI99_RS06795 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LI99_RS06800 PF00455 DeoR C terminal sensor domain LI99_RS06800 PF08220 DeoR-like helix-turn-helix domain LI99_RS06805 PF00294 pfkB family carbohydrate kinase LI99_RS06810 PF01266 FAD dependent oxidoreductase LI99_RS06820 PF05423 Mycobacterium membrane protein LI99_RS06825 PF03176 MMPL family LI99_RS06830 PF01261 Xylose isomerase-like TIM barrel LI99_RS06845 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS06845 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS06845 PF18158 Adaptive response protein AidB N-terminal domain LI99_RS06850 PF00378 Enoyl-CoA hydratase/isomerase LI99_RS06860 PF00378 Enoyl-CoA hydratase/isomerase LI99_RS06865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI99_RS06870 PF00465 Iron-containing alcohol dehydrogenase LI99_RS06895 PF13305 Tetracyclin repressor-like, C-terminal domain LI99_RS06895 PF00440 Bacterial regulatory proteins, tetR family LI99_RS06900 PF00164 Ribosomal protein S12/S23 LI99_RS06905 PF00177 Ribosomal protein S7p/S5e LI99_RS06910 PF03144 Elongation factor Tu domain 2 LI99_RS06910 PF00009 Elongation factor Tu GTP binding domain LI99_RS06910 PF03764 Elongation factor G, domain IV LI99_RS06910 PF00679 Elongation factor G C-terminus LI99_RS06910 PF14492 Elongation Factor G, domain II LI99_RS06915 PF00009 Elongation factor Tu GTP binding domain LI99_RS06915 PF03144 Elongation factor Tu domain 2 LI99_RS06915 PF03143 Elongation factor Tu C-terminal domain LI99_RS06925 PF01083 Cutinase LI99_RS06965 PF00582 Universal stress protein family LI99_RS06970 PF13520 Amino acid permease LI99_RS06975 PF00202 Aminotransferase class-III LI99_RS06985 PF01037 Lrp/AsnC ligand binding domain LI99_RS06990 PF14759 Reductase C-terminal LI99_RS06990 PF07992 Pyridine nucleotide-disulphide oxidoreductase LI99_RS07010 PF17754 MftR C-terminal domain LI99_RS07010 PF00440 Bacterial regulatory proteins, tetR family LI99_RS07025 PF13186 Iron-sulfur cluster-binding domain LI99_RS07025 PF04055 Radical SAM superfamily LI99_RS07030 PF01070 FMN-dependent dehydrogenase LI99_RS07035 PF02633 Creatinine amidohydrolase LI99_RS07040 PF00535 Glycosyl transferase family 2 LI99_RS07045 PF00732 GMC oxidoreductase LI99_RS07045 PF05199 GMC oxidoreductase LI99_RS07050 PF07690 Major Facilitator Superfamily LI99_RS07060 PF00067 Cytochrome P450 LI99_RS07065 PF00067 Cytochrome P450 LI99_RS07070 PF00135 Carboxylesterase family LI99_RS07085 PF00338 Ribosomal protein S10p/S20e LI99_RS07090 PF00297 Ribosomal protein L3 LI99_RS07095 PF00573 Ribosomal protein L4/L1 family LI99_RS07100 PF00276 Ribosomal protein L23 LI99_RS07105 PF03947 Ribosomal Proteins L2, C-terminal domain LI99_RS07105 PF00181 Ribosomal Proteins L2, RNA binding domain LI99_RS07110 PF00203 Ribosomal protein S19 LI99_RS07115 PF00237 Ribosomal protein L22p/L17e LI99_RS07120 PF00189 Ribosomal protein S3, C-terminal domain LI99_RS07120 PF07650 KH domain LI99_RS07125 PF00252 Ribosomal protein L16p/L10e LI99_RS07130 PF00831 Ribosomal L29 protein LI99_RS07135 PF00366 Ribosomal protein S17 LI99_RS07140 PF00293 NUDIX domain LI99_RS07145 PF09278 MerR, DNA binding LI99_RS07145 PF00376 MerR family regulatory protein LI99_RS07150 PF00916 Sulfate permease family LI99_RS07150 PF01740 STAS domain LI99_RS07165 PF00884 Sulfatase LI99_RS07170 PF03781 Sulfatase-modifying factor enzyme 1 LI99_RS07180 PF07690 Major Facilitator Superfamily LI99_RS07185 PF17853 GGDEF-like domain LI99_RS07185 PF13556 PucR C-terminal helix-turn-helix domain LI99_RS07205 PF07992 Pyridine nucleotide-disulphide oxidoreductase LI99_RS07205 PF14759 Reductase C-terminal LI99_RS07210 PF00171 Aldehyde dehydrogenase family LI99_RS07215 PF00355 Rieske [2Fe-2S] domain LI99_RS07215 PF11723 Homotrimeric ring hydroxylase LI99_RS07230 PF00238 Ribosomal protein L14p/L23e LI99_RS07235 PF00467 KOW motif LI99_RS07235 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LI99_RS07240 PF00281 Ribosomal protein L5 LI99_RS07240 PF00673 ribosomal L5P family C-terminus LI99_RS07245 PF00253 Ribosomal protein S14p/S29e LI99_RS07250 PF00410 Ribosomal protein S8 LI99_RS07255 PF00347 Ribosomal protein L6 LI99_RS07260 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LI99_RS07265 PF03719 Ribosomal protein S5, C-terminal domain LI99_RS07265 PF00333 Ribosomal protein S5, N-terminal domain LI99_RS07270 PF00327 Ribosomal protein L30p/L7e LI99_RS07275 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LI99_RS07280 PF00296 Luciferase-like monooxygenase LI99_RS07285 PF01343 Peptidase family S49 LI99_RS07290 PF08946 Osmosensory transporter coiled coil LI99_RS07290 PF00083 Sugar (and other) transporter LI99_RS07295 PF01810 LysE type translocator LI99_RS07300 PF04072 Leucine carboxyl methyltransferase LI99_RS07305 PF04072 Leucine carboxyl methyltransferase LI99_RS07310 PF04072 Leucine carboxyl methyltransferase LI99_RS07315 PF04072 Leucine carboxyl methyltransferase LI99_RS07320 PF00344 SecY translocase LI99_RS07330 PF00557 Metallopeptidase family M24 LI99_RS07335 PF04542 Sigma-70 region 2 LI99_RS07335 PF04545 Sigma-70, region 4 LI99_RS07340 PF13490 Putative zinc-finger LI99_RS07355 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LI99_RS07355 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LI99_RS07360 PF00155 Aminotransferase class I and II LI99_RS07370 PF05384 Sensor protein DegS LI99_RS07370 PF07730 Histidine kinase LI99_RS07370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI99_RS07375 PF00196 Bacterial regulatory proteins, luxR family LI99_RS07375 PF00072 Response regulator receiver domain LI99_RS07385 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LI99_RS07385 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LI99_RS07390 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS07390 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS07390 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS07395 PF00171 Aldehyde dehydrogenase family LI99_RS07400 PF01494 FAD binding domain LI99_RS07405 PF00440 Bacterial regulatory proteins, tetR family LI99_RS07410 PF04072 Leucine carboxyl methyltransferase LI99_RS07415 PF00005 ABC transporter LI99_RS07430 PF00892 EamA-like transporter family LI99_RS07440 PF03576 Peptidase family S58 LI99_RS07450 PF00440 Bacterial regulatory proteins, tetR family LI99_RS07460 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LI99_RS07465 PF16363 GDP-mannose 4,6 dehydratase LI99_RS07480 PF00989 PAS fold LI99_RS07480 PF00512 His Kinase A (phospho-acceptor) domain LI99_RS07480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI99_RS07485 PF07992 Pyridine nucleotide-disulphide oxidoreductase LI99_RS07490 PF01145 SPFH domain / Band 7 family LI99_RS07490 PF15975 Flotillin LI99_RS07500 PF01176 Translation initiation factor 1A / IF-1 LI99_RS07505 PF00444 Ribosomal protein L36 LI99_RS07510 PF00416 Ribosomal protein S13/S18 LI99_RS07515 PF00411 Ribosomal protein S11 LI99_RS07520 PF01479 S4 domain LI99_RS07520 PF00163 Ribosomal protein S4/S9 N-terminal domain LI99_RS07525 PF01000 RNA polymerase Rpb3/RpoA insert domain LI99_RS07525 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LI99_RS07525 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LI99_RS07530 PF01196 Ribosomal protein L17 LI99_RS07535 PF01416 tRNA pseudouridine synthase LI99_RS07540 PF01083 Cutinase LI99_RS07545 PF01083 Cutinase LI99_RS07550 PF01083 Cutinase LI99_RS07570 PF05108 Type VII secretion system ESX-1, transport TM domain B LI99_RS07575 PF00082 Subtilase family LI99_RS07585 PF01580 FtsK/SpoIIIE family LI99_RS07595 PF06013 Proteins of 100 residues with WXG LI99_RS07600 PF06013 Proteins of 100 residues with WXG LI99_RS07605 PF00270 DEAD/DEAH box helicase LI99_RS07605 PF00271 Helicase conserved C-terminal domain LI99_RS07620 PF00171 Aldehyde dehydrogenase family LI99_RS07625 PF03928 Haem-degrading LI99_RS07635 PF02287 Dehydratase small subunit LI99_RS07640 PF02286 Dehydratase large subunit LI99_RS07645 PF02288 Dehydratase medium subunit LI99_RS07650 PF18427 DD-reactivating factor swiveling domain LI99_RS07650 PF08841 Diol dehydratase reactivase ATPase-like domain LI99_RS07665 PF13520 Amino acid permease LI99_RS07670 PF06751 Ethanolamine ammonia lyase large subunit (EutB) LI99_RS07675 PF05985 Ethanolamine ammonia-lyase light chain (EutC) LI99_RS07685 PF00572 Ribosomal protein L13 LI99_RS07690 PF00380 Ribosomal protein S9/S16 LI99_RS07700 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LI99_RS07700 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LI99_RS07700 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LI99_RS07700 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LI99_RS07715 PF03466 LysR substrate binding domain LI99_RS07715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI99_RS07730 PF00440 Bacterial regulatory proteins, tetR family LI99_RS07730 PF08361 MAATS-type transcriptional repressor, C-terminal region LI99_RS07735 PF00296 Luciferase-like monooxygenase LI99_RS07745 PF01380 SIS domain LI99_RS07750 PF12697 Alpha/beta hydrolase family LI99_RS07760 PF00155 Aminotransferase class I and II LI99_RS07760 PF00392 Bacterial regulatory proteins, gntR family LI99_RS07765 PF01256 Carbohydrate kinase LI99_RS07765 PF03853 YjeF-related protein N-terminus LI99_RS07770 PF00282 Pyridoxal-dependent decarboxylase conserved domain LI99_RS07775 PF01168 Alanine racemase, N-terminal domain LI99_RS07775 PF00842 Alanine racemase, C-terminal domain LI99_RS07780 PF00561 alpha/beta hydrolase fold LI99_RS07780 PF00364 Biotin-requiring enzyme LI99_RS07785 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LI99_RS07790 PF00814 Glycoprotease family LI99_RS07795 PF00583 Acetyltransferase (GNAT) family LI99_RS07800 PF00814 Glycoprotease family LI99_RS07810 PF00166 Chaperonin 10 Kd subunit LI99_RS07815 PF00118 TCP-1/cpn60 chaperonin family LI99_RS07830 PF00144 Beta-lactamase LI99_RS07860 PF00378 Enoyl-CoA hydratase/isomerase LI99_RS07880 PF02467 Transcription factor WhiB LI99_RS07890 PF08281 Sigma-70, region 4 LI99_RS07890 PF04542 Sigma-70 region 2 LI99_RS07895 PF16751 Anti-sigma-D factor RsdA to sigma factor binding region LI99_RS07900 PF17252 Family of unknown function (DUF5319) LI99_RS07905 PF00571 CBS domain LI99_RS07905 PF00478 IMP dehydrogenase / GMP reductase domain LI99_RS07910 PF00478 IMP dehydrogenase / GMP reductase domain LI99_RS07915 PF05199 GMC oxidoreductase LI99_RS07920 PF01895 PhoU domain LI99_RS07925 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LI99_RS07925 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LI99_RS07925 PF00205 Thiamine pyrophosphate enzyme, central domain LI99_RS07935 PF03636 Glycosyl hydrolase family 65, N-terminal domain LI99_RS07935 PF03632 Glycosyl hydrolase family 65 central catalytic domain LI99_RS07935 PF03633 Glycosyl hydrolase family 65, C-terminal domain LI99_RS07940 PF13419 Haloacid dehalogenase-like hydrolase LI99_RS07945 PF00958 GMP synthase C terminal domain LI99_RS07945 PF00117 Glutamine amidotransferase class-I LI99_RS07945 PF02540 NAD synthase LI99_RS07955 PF00497 Bacterial extracellular solute-binding proteins, family 3 LI99_RS07960 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS07965 PF00005 ABC transporter LI99_RS08010 PF01156 Inosine-uridine preferring nucleoside hydrolase LI99_RS08015 PF00106 short chain dehydrogenase LI99_RS08025 PF13520 Amino acid permease LI99_RS08055 PF14579 Helix-hairpin-helix motif LI99_RS08055 PF02811 PHP domain LI99_RS08055 PF07733 Bacterial DNA polymerase III alpha NTPase domain LI99_RS08055 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LI99_RS08075 PF00588 SpoU rRNA Methylase family LI99_RS08080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI99_RS08080 PF00512 His Kinase A (phospho-acceptor) domain LI99_RS08085 PF03259 Roadblock/LC7 domain LI99_RS08100 PF13599 Pentapeptide repeats (9 copies) LI99_RS08105 PF00005 ABC transporter LI99_RS08105 PF00498 FHA domain LI99_RS08105 PF01061 ABC-2 type transporter LI99_RS08120 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LI99_RS08125 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LI99_RS08125 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LI99_RS08135 PF00398 Ribosomal RNA adenine dimethylase LI99_RS08145 PF01494 FAD binding domain LI99_RS08150 PF08241 Methyltransferase domain LI99_RS08155 PF00561 alpha/beta hydrolase fold LI99_RS08160 PF01053 Cys/Met metabolism PLP-dependent enzyme LI99_RS08170 PF03971 Monomeric isocitrate dehydrogenase LI99_RS08180 PF03372 Endonuclease/Exonuclease/phosphatase family LI99_RS08185 PF00579 tRNA synthetases class I (W and Y) LI99_RS08190 PF03631 Virulence factor BrkB LI99_RS08195 PF00893 Small Multidrug Resistance protein LI99_RS08200 PF03060 Nitronate monooxygenase LI99_RS08205 PF00768 D-alanyl-D-alanine carboxypeptidase LI99_RS08210 PF00202 Aminotransferase class-III LI99_RS08225 PF00171 Aldehyde dehydrogenase family LI99_RS08230 PF08281 Sigma-70, region 4 LI99_RS08230 PF04542 Sigma-70 region 2 LI99_RS08230 PF12680 SnoaL-like domain LI99_RS08240 PF02627 Carboxymuconolactone decarboxylase family LI99_RS08245 PF13085 2Fe-2S iron-sulfur cluster binding domain LI99_RS08250 PF02910 Fumarate reductase flavoprotein C-term LI99_RS08250 PF00890 FAD binding domain LI99_RS08260 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LI99_RS08265 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LI99_RS08270 PF00591 Glycosyl transferase family, a/b domain LI99_RS08270 PF02885 Glycosyl transferase family, helical bundle domain LI99_RS08270 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain LI99_RS08275 PF00962 Adenosine/AMP deaminase LI99_RS08280 PF03466 LysR substrate binding domain LI99_RS08280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI99_RS08285 PF10415 Fumarase C C-terminus LI99_RS08285 PF00206 Lyase LI99_RS08300 PF01042 Endoribonuclease L-PSP LI99_RS08310 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LI99_RS08345 PF08281 Sigma-70, region 4 LI99_RS08345 PF04542 Sigma-70 region 2 LI99_RS08350 PF00072 Response regulator receiver domain LI99_RS08350 PF00196 Bacterial regulatory proteins, luxR family LI99_RS08355 PF12680 SnoaL-like domain LI99_RS08355 PF04542 Sigma-70 region 2 LI99_RS08355 PF08281 Sigma-70, region 4 LI99_RS08360 PF00890 FAD binding domain LI99_RS08360 PF02910 Fumarate reductase flavoprotein C-term LI99_RS08370 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LI99_RS08370 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LI99_RS08370 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LI99_RS08370 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LI99_RS08380 PF05145 Transition state regulatory protein AbrB LI99_RS08390 PF01494 FAD binding domain LI99_RS08400 PF01048 Phosphorylase superfamily LI99_RS08410 PF01546 Peptidase family M20/M25/M40 LI99_RS08410 PF04107 Glutamate-cysteine ligase family 2(GCS2) LI99_RS08415 PF13407 Periplasmic binding protein domain LI99_RS08420 PF00005 ABC transporter LI99_RS08425 PF02653 Branched-chain amino acid transport system / permease component LI99_RS08430 PF13419 Haloacid dehalogenase-like hydrolase LI99_RS08435 PF00356 Bacterial regulatory proteins, lacI family LI99_RS08440 PF02653 Branched-chain amino acid transport system / permease component LI99_RS08445 PF02653 Branched-chain amino acid transport system / permease component LI99_RS08450 PF00005 ABC transporter LI99_RS08455 PF13407 Periplasmic binding protein domain LI99_RS08460 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LI99_RS08460 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LI99_RS08465 PF00596 Class II Aldolase and Adducin N-terminal domain LI99_RS08470 PF11762 L-arabinose isomerase C-terminal domain LI99_RS08470 PF02610 L-arabinose isomerase LI99_RS08485 PF13936 Helix-turn-helix domain LI99_RS08485 PF00665 Integrase core domain LI99_RS08490 PF00665 Integrase core domain LI99_RS08490 PF13276 HTH-like domain LI99_RS08550 PF02371 Transposase IS116/IS110/IS902 family LI99_RS08550 PF01548 Transposase LI99_RS08555 PF00872 Transposase, Mutator family LI99_RS08570 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LI99_RS08570 PF07992 Pyridine nucleotide-disulphide oxidoreductase LI99_RS08575 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LI99_RS08575 PF01266 FAD dependent oxidoreductase LI99_RS08580 PF00849 RNA pseudouridylate synthase LI99_RS08595 PF00378 Enoyl-CoA hydratase/isomerase LI99_RS08600 PF00440 Bacterial regulatory proteins, tetR family LI99_RS08605 PF00111 2Fe-2S iron-sulfur cluster binding domain LI99_RS08605 PF00970 Oxidoreductase FAD-binding domain LI99_RS08605 PF00175 Oxidoreductase NAD-binding domain LI99_RS08610 PF00487 Fatty acid desaturase LI99_RS08620 PF00440 Bacterial regulatory proteins, tetR family LI99_RS08625 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LI99_RS08625 PF01565 FAD binding domain LI99_RS08630 PF04542 Sigma-70 region 2 LI99_RS08630 PF08281 Sigma-70, region 4 LI99_RS08640 PF00296 Luciferase-like monooxygenase LI99_RS08645 PF00248 Aldo/keto reductase family LI99_RS08650 PF01048 Phosphorylase superfamily LI99_RS08665 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LI99_RS08665 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LI99_RS08670 PF08494 DEAD/H associated LI99_RS08670 PF00271 Helicase conserved C-terminal domain LI99_RS08670 PF00270 DEAD/DEAH box helicase LI99_RS08690 PF00171 Aldehyde dehydrogenase family LI99_RS08695 PF01037 Lrp/AsnC ligand binding domain LI99_RS08700 PF00202 Aminotransferase class-III LI99_RS08735 PF17827 PrmC N-terminal domain LI99_RS08735 PF05175 Methyltransferase small domain LI99_RS08760 PF12706 Beta-lactamase superfamily domain LI99_RS08760 PF00753 Metallo-beta-lactamase superfamily LI99_RS08780 PF01566 Natural resistance-associated macrophage protein LI99_RS08840 PF00296 Luciferase-like monooxygenase LI99_RS08850 PF08240 Alcohol dehydrogenase GroES-like domain LI99_RS08850 PF00107 Zinc-binding dehydrogenase LI99_RS08855 PF01134 Glucose inhibited division protein A LI99_RS08855 PF13932 GidA associated domain LI99_RS08865 PF00083 Sugar (and other) transporter LI99_RS08865 PF07690 Major Facilitator Superfamily LI99_RS08870 PF03466 LysR substrate binding domain LI99_RS08870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI99_RS08895 PF04545 Sigma-70, region 4 LI99_RS08895 PF04539 Sigma-70 region 3 LI99_RS08895 PF04542 Sigma-70 region 2 LI99_RS08910 PF02785 Biotin carboxylase C-terminal domain LI99_RS08910 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LI99_RS08910 PF00289 Biotin carboxylase, N-terminal domain LI99_RS08910 PF00364 Biotin-requiring enzyme LI99_RS08915 PF02657 Fe-S metabolism associated domain LI99_RS08920 PF00581 Rhodanese-like domain LI99_RS08930 PF02545 Maf-like protein LI99_RS08940 PF01039 Carboxyl transferase domain LI99_RS08970 PF02222 ATP-grasp domain LI99_RS08970 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LI99_RS08975 PF00731 AIR carboxylase LI99_RS08980 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS08980 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS08980 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS08985 PF02237 Biotin protein ligase C terminal domain LI99_RS08985 PF03099 Biotin/lipoate A/B protein ligase family LI99_RS08995 PF03816 Cell envelope-related transcriptional attenuator domain LI99_RS08995 PF13399 LytR cell envelope-related transcriptional attenuator LI99_RS09000 PF04321 RmlD substrate binding domain LI99_RS09010 PF00483 Nucleotidyl transferase LI99_RS09020 PF01996 F420-0:Gamma-glutamyl ligase LI99_RS09020 PF00881 Nitroreductase family LI99_RS09025 PF01933 Uncharacterised protein family UPF0052 LI99_RS09030 PF02467 Transcription factor WhiB LI99_RS09045 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LI99_RS09045 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LI99_RS09045 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LI99_RS09045 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LI99_RS09055 PF01238 Phosphomannose isomerase type I LI99_RS09065 PF13520 Amino acid permease LI99_RS09070 PF00487 Fatty acid desaturase LI99_RS09075 PF00301 Rubredoxin LI99_RS09080 PF00301 Rubredoxin LI99_RS09090 PF05221 S-adenosyl-L-homocysteine hydrolase LI99_RS09090 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain LI99_RS09100 PF03458 UPF0126 domain LI99_RS09110 PF13247 4Fe-4S dicluster domain LI99_RS09110 PF12800 4Fe-4S binding domain LI99_RS09110 PF09163 Formate dehydrogenase N, transmembrane LI99_RS09115 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LI99_RS09115 PF00384 Molybdopterin oxidoreductase LI99_RS09115 PF01568 Molydopterin dinucleotide binding domain LI99_RS09120 PF00384 Molybdopterin oxidoreductase LI99_RS09120 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LI99_RS09120 PF01568 Molydopterin dinucleotide binding domain LI99_RS09125 PF09106 Elongation factor SelB, winged helix LI99_RS09125 PF03144 Elongation factor Tu domain 2 LI99_RS09125 PF00009 Elongation factor Tu GTP binding domain LI99_RS09125 PF09107 Elongation factor SelB, winged helix LI99_RS09130 PF03841 L-seryl-tRNA selenium transferase LI99_RS09130 PF12390 Selenocysteine synthase N terminal LI99_RS09140 PF00586 AIR synthase related protein, N-terminal domain LI99_RS09140 PF02769 AIR synthase related protein, C-terminal domain LI99_RS09145 PF13462 Thioredoxin LI99_RS09145 PF06965 Na+/H+ antiporter 1 LI99_RS09150 PF06480 FtsH Extracellular LI99_RS09150 PF17862 AAA+ lid domain LI99_RS09150 PF01434 Peptidase family M41 LI99_RS09150 PF00004 ATPase family associated with various cellular activities (AAA) LI99_RS09170 PF01695 IstB-like ATP binding protein LI99_RS09245 PF02223 Thymidylate kinase LI99_RS09250 PF00072 Response regulator receiver domain LI99_RS09250 PF00486 Transcriptional regulatory protein, C terminal LI99_RS09255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI99_RS09255 PF00512 His Kinase A (phospho-acceptor) domain LI99_RS09255 PF00672 HAMP domain LI99_RS09260 PF10646 Sporulation and spore germination LI99_RS09260 PF10647 Lipoprotein LpqB beta-propeller domain LI99_RS09270 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus LI99_RS09270 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LI99_RS09280 PF01043 SecA preprotein cross-linking domain LI99_RS09280 PF07517 SecA DEAD-like domain LI99_RS09280 PF07516 SecA Wing and Scaffold domain LI99_RS09290 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain LI99_RS09295 PF02028 BCCT, betaine/carnitine/choline family transporter LI99_RS09305 PF00970 Oxidoreductase FAD-binding domain LI99_RS09305 PF00175 Oxidoreductase NAD-binding domain LI99_RS09305 PF00111 2Fe-2S iron-sulfur cluster binding domain LI99_RS09310 PF00487 Fatty acid desaturase LI99_RS09320 PF04072 Leucine carboxyl methyltransferase LI99_RS09325 PF03193 RsgA GTPase LI99_RS09330 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LI99_RS09335 PF02586 SOS response associated peptidase (SRAP) LI99_RS09340 PF17827 PrmC N-terminal domain LI99_RS09340 PF05175 Methyltransferase small domain LI99_RS09345 PF01209 ubiE/COQ5 methyltransferase family LI99_RS09355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI99_RS09355 PF03466 LysR substrate binding domain LI99_RS09360 PF02803 Thiolase, C-terminal domain LI99_RS09360 PF00108 Thiolase, N-terminal domain LI99_RS09365 PF12146 Serine aminopeptidase, S33 LI99_RS09370 PF01144 Coenzyme A transferase LI99_RS09375 PF01144 Coenzyme A transferase LI99_RS09385 PF00196 Bacterial regulatory proteins, luxR family LI99_RS09390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI99_RS09390 PF03466 LysR substrate binding domain LI99_RS09395 PF02515 CoA-transferase family III LI99_RS09400 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS09400 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS09400 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS09405 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS09405 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS09405 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS09410 PF00970 Oxidoreductase FAD-binding domain LI99_RS09410 PF00111 2Fe-2S iron-sulfur cluster binding domain LI99_RS09410 PF00175 Oxidoreductase NAD-binding domain LI99_RS09415 PF00866 Ring hydroxylating beta subunit LI99_RS09420 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LI99_RS09420 PF00355 Rieske [2Fe-2S] domain LI99_RS09425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI99_RS09425 PF03466 LysR substrate binding domain LI99_RS09430 PF13378 Enolase C-terminal domain-like LI99_RS09430 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LI99_RS09435 PF00775 Dioxygenase LI99_RS09435 PF04444 Catechol dioxygenase N terminus LI99_RS09440 PF02426 Muconolactone delta-isomerase LI99_RS09445 PF04073 Aminoacyl-tRNA editing domain LI99_RS09450 PF04542 Sigma-70 region 2 LI99_RS09450 PF08281 Sigma-70, region 4 LI99_RS09455 PF13490 Putative zinc-finger LI99_RS09465 PF00364 Biotin-requiring enzyme LI99_RS09470 PF12282 Signal transduction histidine kinase LI99_RS09470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI99_RS09470 PF07568 Histidine kinase LI99_RS09475 PF02467 Transcription factor WhiB LI99_RS09480 PF00781 Diacylglycerol kinase catalytic domain LI99_RS09485 PF02810 SEC-C motif LI99_RS09490 PF01220 Dehydroquinase class II LI99_RS09505 PF00425 chorismate binding enzyme LI99_RS09510 PF00300 Histidine phosphatase superfamily (branch 1) LI99_RS09515 PF13614 AAA domain LI99_RS09530 PF00271 Helicase conserved C-terminal domain LI99_RS09530 PF00270 DEAD/DEAH box helicase LI99_RS09550 PF00440 Bacterial regulatory proteins, tetR family LI99_RS09550 PF08361 MAATS-type transcriptional repressor, C-terminal region LI99_RS09560 PF00899 ThiF family LI99_RS09560 PF00581 Rhodanese-like domain LI99_RS09570 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LI99_RS09575 PF12697 Alpha/beta hydrolase family LI99_RS09580 PF13361 UvrD-like helicase C-terminal domain LI99_RS09580 PF00580 UvrD/REP helicase N-terminal domain LI99_RS09585 PF00580 UvrD/REP helicase N-terminal domain LI99_RS09585 PF13361 UvrD-like helicase C-terminal domain LI99_RS09600 PF02254 TrkA-N domain LI99_RS09600 PF07885 Ion channel LI99_RS09605 PF09297 NADH pyrophosphatase zinc ribbon domain LI99_RS09605 PF00293 NUDIX domain LI99_RS09605 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain LI99_RS09610 PF00462 Glutaredoxin LI99_RS09630 PF00580 UvrD/REP helicase N-terminal domain LI99_RS09630 PF00570 HRDC domain LI99_RS09630 PF13361 UvrD-like helicase C-terminal domain LI99_RS09635 PF02467 Transcription factor WhiB LI99_RS09640 PF03109 ABC1 family LI99_RS09655 PF13180 PDZ domain LI99_RS09655 PF05362 Lon protease (S16) C-terminal proteolytic domain LI99_RS09660 PF03699 Uncharacterised protein family (UPF0182) LI99_RS09680 PF00498 FHA domain LI99_RS09680 PF03704 Bacterial transcriptional activator domain LI99_RS09680 PF00486 Transcriptional regulatory protein, C terminal LI99_RS09685 PF08031 Berberine and berberine like LI99_RS09685 PF01565 FAD binding domain LI99_RS09700 PF00440 Bacterial regulatory proteins, tetR family LI99_RS09700 PF08361 MAATS-type transcriptional repressor, C-terminal region LI99_RS09710 PF13411 MerR HTH family regulatory protein LI99_RS09715 PF02954 Bacterial regulatory protein, Fis family LI99_RS09720 PF02332 Methane/Phenol/Toluene Hydroxylase LI99_RS09725 PF00970 Oxidoreductase FAD-binding domain LI99_RS09725 PF00111 2Fe-2S iron-sulfur cluster binding domain LI99_RS09725 PF00175 Oxidoreductase NAD-binding domain LI99_RS09730 PF02332 Methane/Phenol/Toluene Hydroxylase LI99_RS09735 PF02406 MmoB/DmpM family LI99_RS09750 PF08240 Alcohol dehydrogenase GroES-like domain LI99_RS09750 PF00107 Zinc-binding dehydrogenase LI99_RS09755 PF00118 TCP-1/cpn60 chaperonin family LI99_RS09765 PF01494 FAD binding domain LI99_RS09775 PF00501 AMP-binding enzyme LI99_RS09775 PF13193 AMP-binding enzyme C-terminal domain LI99_RS09780 PF07690 Major Facilitator Superfamily LI99_RS09780 PF00083 Sugar (and other) transporter LI99_RS09785 PF00561 alpha/beta hydrolase fold LI99_RS09790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI99_RS09790 PF03466 LysR substrate binding domain LI99_RS09795 PF00180 Isocitrate/isopropylmalate dehydrogenase LI99_RS09810 PF00970 Oxidoreductase FAD-binding domain LI99_RS09810 PF00111 2Fe-2S iron-sulfur cluster binding domain LI99_RS09820 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS09820 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS09820 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS09825 PF02515 CoA-transferase family III LI99_RS09840 PF07729 FCD domain LI99_RS09840 PF00392 Bacterial regulatory proteins, gntR family LI99_RS09845 PF00296 Luciferase-like monooxygenase LI99_RS09850 PF07969 Amidohydrolase family LI99_RS09855 PF00561 alpha/beta hydrolase fold LI99_RS09870 PF00083 Sugar (and other) transporter LI99_RS09900 PF01557 Fumarylacetoacetate (FAA) hydrolase family LI99_RS09905 PF07729 FCD domain LI99_RS09905 PF00392 Bacterial regulatory proteins, gntR family LI99_RS09915 PF00356 Bacterial regulatory proteins, lacI family LI99_RS09920 PF00815 Histidinol dehydrogenase LI99_RS09930 PF00005 ABC transporter LI99_RS09930 PF03459 TOBE domain LI99_RS09935 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS09950 PF00106 short chain dehydrogenase LI99_RS09965 PF02447 GntP family permease LI99_RS09970 PF02515 CoA-transferase family III LI99_RS09975 PF00682 HMGL-like LI99_RS09980 PF09339 IclR helix-turn-helix domain LI99_RS09980 PF01614 Bacterial transcriptional regulator LI99_RS09985 PF00106 short chain dehydrogenase LI99_RS09990 PF04075 F420H(2)-dependent quinone reductase LI99_RS09995 PF07690 Major Facilitator Superfamily LI99_RS10005 PF00440 Bacterial regulatory proteins, tetR family LI99_RS10010 PF01168 Alanine racemase, N-terminal domain LI99_RS10015 PF00107 Zinc-binding dehydrogenase LI99_RS10015 PF08240 Alcohol dehydrogenase GroES-like domain LI99_RS10020 PF00107 Zinc-binding dehydrogenase LI99_RS10020 PF08240 Alcohol dehydrogenase GroES-like domain LI99_RS10025 PF00561 alpha/beta hydrolase fold LI99_RS10030 PF01593 Flavin containing amine oxidoreductase LI99_RS10035 PF00296 Luciferase-like monooxygenase LI99_RS10040 PF00743 Flavin-binding monooxygenase-like LI99_RS10060 PF01636 Phosphotransferase enzyme family LI99_RS10070 PF00083 Sugar (and other) transporter LI99_RS10070 PF07690 Major Facilitator Superfamily LI99_RS10075 PF00296 Luciferase-like monooxygenase LI99_RS10085 PF08240 Alcohol dehydrogenase GroES-like domain LI99_RS10085 PF00107 Zinc-binding dehydrogenase LI99_RS10090 PF00378 Enoyl-CoA hydratase/isomerase LI99_RS10100 PF00361 Proton-conducting membrane transporter LI99_RS10105 PF00361 Proton-conducting membrane transporter LI99_RS10110 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LI99_RS10110 PF00361 Proton-conducting membrane transporter LI99_RS10115 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LI99_RS10120 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LI99_RS10125 PF12838 4Fe-4S dicluster domain LI99_RS10130 PF00146 NADH dehydrogenase LI99_RS10135 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LI99_RS10135 PF01568 Molydopterin dinucleotide binding domain LI99_RS10135 PF00384 Molybdopterin oxidoreductase LI99_RS10140 PF10531 SLBB domain LI99_RS10140 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LI99_RS10140 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LI99_RS10150 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LI99_RS10155 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LI99_RS10160 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LI99_RS10165 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LI99_RS10185 PF01209 ubiE/COQ5 methyltransferase family LI99_RS10200 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS10200 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS10200 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS10210 PF00682 HMGL-like LI99_RS10215 PF02515 CoA-transferase family III LI99_RS10230 PF04229 GrpB protein LI99_RS10235 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS10240 PF00756 Putative esterase LI99_RS10250 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS10250 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS10250 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS10265 PF00459 Inositol monophosphatase family LI99_RS10275 PF07992 Pyridine nucleotide-disulphide oxidoreductase LI99_RS10280 PF03462 PCRF domain LI99_RS10280 PF00472 RF-1 domain LI99_RS10285 PF00924 Mechanosensitive ion channel LI99_RS10295 PF00005 ABC transporter LI99_RS10300 PF18075 FtsX extracellular domain LI99_RS10300 PF02687 FtsX-like permease family LI99_RS10305 PF01668 SmpB protein LI99_RS10310 PF03576 Peptidase family S58 LI99_RS10315 PF05694 56kDa selenium binding protein (SBP56) LI99_RS10320 PF01083 Cutinase LI99_RS10325 PF01925 Sulfite exporter TauE/SafE LI99_RS10335 PF01557 Fumarylacetoacetate (FAA) hydrolase family LI99_RS10350 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS10355 PF00005 ABC transporter LI99_RS10365 PF00155 Aminotransferase class I and II LI99_RS10365 PF00392 Bacterial regulatory proteins, gntR family LI99_RS10370 PF01068 ATP dependent DNA ligase domain LI99_RS10370 PF13298 DNA polymerase Ligase (LigD) LI99_RS10370 PF04679 ATP dependent DNA ligase C terminal region LI99_RS10400 PF11209 Protein of unknown function (DUF2993) LI99_RS10405 PF01817 Chorismate mutase type II LI99_RS10430 PF02378 Phosphotransferase system, EIIC LI99_RS10430 PF00367 phosphotransferase system, EIIB LI99_RS10430 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LI99_RS10435 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LI99_RS10440 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LI99_RS10445 PF01979 Amidohydrolase family LI99_RS10450 PF00072 Response regulator receiver domain LI99_RS10450 PF00196 Bacterial regulatory proteins, luxR family LI99_RS10455 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LI99_RS10455 PF00381 PTS HPr component phosphorylation site LI99_RS10455 PF00391 PEP-utilising enzyme, mobile domain LI99_RS10455 PF02896 PEP-utilising enzyme, TIM barrel domain LI99_RS10455 PF05524 PEP-utilising enzyme, N-terminal LI99_RS10460 PF02734 DAK2 domain LI99_RS10465 PF02733 Dak1 domain LI99_RS10470 PF00230 Major intrinsic protein LI99_RS10475 PF01614 Bacterial transcriptional regulator LI99_RS10475 PF09339 IclR helix-turn-helix domain LI99_RS10485 PF04343 Protein of unknown function, DUF488 LI99_RS10495 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS10495 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS10495 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS10500 PF00501 AMP-binding enzyme LI99_RS10505 PF00550 Phosphopantetheine attachment site LI99_RS10515 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LI99_RS10520 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LI99_RS10525 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LI99_RS10525 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LI99_RS10525 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LI99_RS10525 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LI99_RS10530 PF07690 Major Facilitator Superfamily LI99_RS10540 PF13784 Fic/DOC family N-terminal LI99_RS10540 PF02661 Fic/DOC family LI99_RS10590 PF01695 IstB-like ATP binding protein LI99_RS10625 PF05114 Protein of unknown function (DUF692) LI99_RS10645 PF00171 Aldehyde dehydrogenase family LI99_RS10650 PF00392 Bacterial regulatory proteins, gntR family LI99_RS10650 PF07729 FCD domain LI99_RS10655 PF00456 Transketolase, thiamine diphosphate binding domain LI99_RS10660 PF02780 Transketolase, C-terminal domain LI99_RS10660 PF02779 Transketolase, pyrimidine binding domain LI99_RS10665 PF00557 Metallopeptidase family M24 LI99_RS10675 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LI99_RS10675 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LI99_RS10680 PF01039 Carboxyl transferase domain LI99_RS10685 PF02515 CoA-transferase family III LI99_RS10695 PF07729 FCD domain LI99_RS10695 PF00392 Bacterial regulatory proteins, gntR family LI99_RS10700 PF13538 UvrD-like helicase C-terminal domain LI99_RS10710 PF00296 Luciferase-like monooxygenase LI99_RS10715 PF00296 Luciferase-like monooxygenase LI99_RS10725 PF00440 Bacterial regulatory proteins, tetR family LI99_RS10735 PF00440 Bacterial regulatory proteins, tetR family LI99_RS10735 PF13977 BetI-type transcriptional repressor, C-terminal LI99_RS10740 PF17841 BID domain of Bartonella effector protein (Bep) LI99_RS10740 PF02661 Fic/DOC family LI99_RS10770 PF01425 Amidase LI99_RS10785 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS10785 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS10785 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS10795 PF07739 TipAS antibiotic-recognition domain LI99_RS10795 PF13411 MerR HTH family regulatory protein LI99_RS10800 PF00440 Bacterial regulatory proteins, tetR family LI99_RS10805 PF00440 Bacterial regulatory proteins, tetR family LI99_RS10815 PF13185 GAF domain LI99_RS10815 PF00563 EAL domain LI99_RS10815 PF00990 Diguanylate cyclase, GGDEF domain LI99_RS10820 PF00899 ThiF family LI99_RS10830 PF01842 ACT domain LI99_RS10830 PF00551 Formyl transferase LI99_RS10835 PF01575 MaoC like domain LI99_RS10845 PF12146 Serine aminopeptidase, S33 LI99_RS10855 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS10855 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS10855 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS10865 PF02803 Thiolase, C-terminal domain LI99_RS10865 PF00108 Thiolase, N-terminal domain LI99_RS10870 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS10870 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS10870 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS10875 PF00392 Bacterial regulatory proteins, gntR family LI99_RS10875 PF07729 FCD domain LI99_RS10880 PF02515 CoA-transferase family III LI99_RS10890 PF00106 short chain dehydrogenase LI99_RS10895 PF00891 O-methyltransferase domain LI99_RS10900 PF13193 AMP-binding enzyme C-terminal domain LI99_RS10900 PF00501 AMP-binding enzyme LI99_RS10905 PF13193 AMP-binding enzyme C-terminal domain LI99_RS10905 PF00501 AMP-binding enzyme LI99_RS10910 PF00501 AMP-binding enzyme LI99_RS10910 PF13193 AMP-binding enzyme C-terminal domain LI99_RS10915 PF00378 Enoyl-CoA hydratase/isomerase LI99_RS10920 PF00378 Enoyl-CoA hydratase/isomerase LI99_RS10925 PF00378 Enoyl-CoA hydratase/isomerase LI99_RS10935 PF00378 Enoyl-CoA hydratase/isomerase LI99_RS10940 PF02803 Thiolase, C-terminal domain LI99_RS10940 PF00108 Thiolase, N-terminal domain LI99_RS10945 PF00440 Bacterial regulatory proteins, tetR family LI99_RS10945 PF02909 Tetracyclin repressor-like, C-terminal domain LI99_RS10955 PF00378 Enoyl-CoA hydratase/isomerase LI99_RS10965 PF00378 Enoyl-CoA hydratase/isomerase LI99_RS10975 PF13193 AMP-binding enzyme C-terminal domain LI99_RS10975 PF00501 AMP-binding enzyme LI99_RS10990 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS10990 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS10990 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS11000 PF02803 Thiolase, C-terminal domain LI99_RS11000 PF00108 Thiolase, N-terminal domain LI99_RS11005 PF00384 Molybdopterin oxidoreductase LI99_RS11005 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LI99_RS11005 PF01568 Molydopterin dinucleotide binding domain LI99_RS11010 PF00171 Aldehyde dehydrogenase family LI99_RS11015 PF02909 Tetracyclin repressor-like, C-terminal domain LI99_RS11015 PF00440 Bacterial regulatory proteins, tetR family LI99_RS11020 PF00067 Cytochrome P450 LI99_RS11025 PF00171 Aldehyde dehydrogenase family LI99_RS11030 PF13193 AMP-binding enzyme C-terminal domain LI99_RS11030 PF00501 AMP-binding enzyme LI99_RS11035 PF00857 Isochorismatase family LI99_RS11050 PF12867 DinB superfamily LI99_RS11080 PF01494 FAD binding domain LI99_RS11090 PF01039 Carboxyl transferase domain LI99_RS11095 PF00296 Luciferase-like monooxygenase LI99_RS11100 PF00067 Cytochrome P450 LI99_RS11105 PF13722 5TM C-terminal transporter carbon starvation CstA LI99_RS11105 PF02554 Carbon starvation protein CstA LI99_RS11110 PF14525 AraC-binding-like domain LI99_RS11110 PF12833 Helix-turn-helix domain LI99_RS11125 PF00374 Nickel-dependent hydrogenase LI99_RS11145 PF01521 Iron-sulphur cluster biosynthesis LI99_RS11145 PF01106 NifU-like domain LI99_RS11160 PF02492 CobW/HypB/UreG, nucleotide-binding domain LI99_RS11165 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA LI99_RS11170 PF01300 Telomere recombination LI99_RS11170 PF17788 HypF Kae1-like domain LI99_RS11170 PF07503 HypF finger LI99_RS11170 PF00708 Acylphosphatase LI99_RS11175 PF01455 HupF/HypC family LI99_RS11180 PF01924 Hydrogenase formation hypA family LI99_RS11185 PF02769 AIR synthase related protein, C-terminal domain LI99_RS11185 PF00586 AIR synthase related protein, N-terminal domain LI99_RS11190 PF04679 ATP dependent DNA ligase C terminal region LI99_RS11190 PF01068 ATP dependent DNA ligase domain LI99_RS11190 PF04675 DNA ligase N terminus LI99_RS11200 PF00106 short chain dehydrogenase LI99_RS11205 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LI99_RS11205 PF00205 Thiamine pyrophosphate enzyme, central domain LI99_RS11205 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LI99_RS11225 PF13649 Methyltransferase domain LI99_RS11245 PF00067 Cytochrome P450 LI99_RS11255 PF00106 short chain dehydrogenase LI99_RS11260 PF00245 Alkaline phosphatase LI99_RS11270 PF11799 impB/mucB/samB family C-terminal domain LI99_RS11270 PF00817 impB/mucB/samB family LI99_RS11280 PF03358 NADPH-dependent FMN reductase LI99_RS11295 PF08343 Ribonucleotide reductase N-terminal LI99_RS11295 PF00317 Ribonucleotide reductase, all-alpha domain LI99_RS11295 PF02867 Ribonucleotide reductase, barrel domain LI99_RS11335 PF00296 Luciferase-like monooxygenase LI99_RS11340 PF01494 FAD binding domain LI99_RS11345 PF00440 Bacterial regulatory proteins, tetR family LI99_RS11350 PF00743 Flavin-binding monooxygenase-like LI99_RS11360 PF00268 Ribonucleotide reductase, small chain LI99_RS11385 PF08240 Alcohol dehydrogenase GroES-like domain LI99_RS11385 PF00107 Zinc-binding dehydrogenase LI99_RS11415 PF00392 Bacterial regulatory proteins, gntR family LI99_RS11415 PF00155 Aminotransferase class I and II LI99_RS11425 PF00005 ABC transporter LI99_RS11435 PF00378 Enoyl-CoA hydratase/isomerase LI99_RS11440 PF08241 Methyltransferase domain LI99_RS11445 PF18096 THUMP domain-like LI99_RS11450 PF11738 Protein of unknown function (DUF3298) LI99_RS11455 PF01235 Sodium:alanine symporter family LI99_RS11460 PF13360 PQQ-like domain LI99_RS11465 PF00132 Bacterial transferase hexapeptide (six repeats) LI99_RS11475 PF01070 FMN-dependent dehydrogenase LI99_RS11490 PF04101 Glycosyltransferase family 28 C-terminal domain LI99_RS11500 PF00355 Rieske [2Fe-2S] domain LI99_RS11505 PF01593 Flavin containing amine oxidoreductase LI99_RS11525 PF01593 Flavin containing amine oxidoreductase LI99_RS11530 PF00534 Glycosyl transferases group 1 LI99_RS11530 PF13439 Glycosyltransferase Family 4 LI99_RS11535 PF09210 Domain of unknown function (DUF1957) LI99_RS11535 PF03065 Glycosyl hydrolase family 57 LI99_RS11540 PF08241 Methyltransferase domain LI99_RS11545 PF01012 Electron transfer flavoprotein domain LI99_RS11550 PF01012 Electron transfer flavoprotein domain LI99_RS11550 PF00766 Electron transfer flavoprotein FAD-binding domain LI99_RS11560 PF01996 F420-0:Gamma-glutamyl ligase LI99_RS11560 PF00881 Nitroreductase family LI99_RS11575 PF00266 Aminotransferase class-V LI99_RS11590 PF00501 AMP-binding enzyme LI99_RS11590 PF13193 AMP-binding enzyme C-terminal domain LI99_RS11600 PF01653 NAD-dependent DNA ligase adenylation domain LI99_RS11600 PF00533 BRCA1 C Terminus (BRCT) domain LI99_RS11600 PF03120 NAD-dependent DNA ligase OB-fold domain LI99_RS11600 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LI99_RS11600 PF12826 Helix-hairpin-helix motif LI99_RS11610 PF02686 Glu-tRNAGln amidotransferase C subunit LI99_RS11615 PF01425 Amidase LI99_RS11620 PF00365 Phosphofructokinase LI99_RS11625 PF02637 GatB domain LI99_RS11625 PF02934 GatB/GatE catalytic domain LI99_RS11645 PF10756 Bacterial PH domain LI99_RS11650 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LI99_RS11650 PF00205 Thiamine pyrophosphate enzyme, central domain LI99_RS11650 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LI99_RS11655 PF10369 Small subunit of acetolactate synthase LI99_RS11660 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LI99_RS11660 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LI99_RS11665 PF03358 NADPH-dependent FMN reductase LI99_RS11680 PF01842 ACT domain LI99_RS11680 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LI99_RS11680 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LI99_RS11685 PF00180 Isocitrate/isopropylmalate dehydrogenase LI99_RS11690 PF07690 Major Facilitator Superfamily LI99_RS11700 PF01557 Fumarylacetoacetate (FAA) hydrolase family LI99_RS11705 PF00749 tRNA synthetases class I (E and Q), catalytic domain LI99_RS11725 PF00330 Aconitase family (aconitate hydratase) LI99_RS11730 PF00694 Aconitase C-terminal domain LI99_RS11735 PF00216 Bacterial DNA-binding protein LI99_RS11740 PF00293 NUDIX domain LI99_RS11740 PF00300 Histidine phosphatase superfamily (branch 1) LI99_RS11745 PF02503 Polyphosphate kinase middle domain LI99_RS11745 PF13090 Polyphosphate kinase C-terminal domain 2 LI99_RS11745 PF17941 Polyphosphate kinase C-terminal domain 1 LI99_RS11745 PF13089 Polyphosphate kinase N-terminal domain LI99_RS11750 PF01983 Guanylyl transferase CofC like LI99_RS11755 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LI99_RS11755 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LI99_RS11760 PF01053 Cys/Met metabolism PLP-dependent enzyme LI99_RS11765 PF07478 D-ala D-ala ligase C-terminus LI99_RS11765 PF01820 D-ala D-ala ligase N-terminus LI99_RS11780 PF00586 AIR synthase related protein, N-terminal domain LI99_RS11780 PF02769 AIR synthase related protein, C-terminal domain LI99_RS11785 PF03167 Uracil DNA glycosylase superfamily LI99_RS11795 PF00830 Ribosomal L28 family LI99_RS11800 PF02734 DAK2 domain LI99_RS11800 PF13684 Dihydroxyacetone kinase family LI99_RS11805 PF00271 Helicase conserved C-terminal domain LI99_RS11805 PF17191 RecG wedge domain LI99_RS11805 PF00270 DEAD/DEAH box helicase LI99_RS11825 PF00248 Aldo/keto reductase family LI99_RS11830 PF00248 Aldo/keto reductase family LI99_RS11835 PF07859 alpha/beta hydrolase fold LI99_RS11850 PF00364 Biotin-requiring enzyme LI99_RS11850 PF02785 Biotin carboxylase C-terminal domain LI99_RS11850 PF00682 HMGL-like LI99_RS11850 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LI99_RS11850 PF00289 Biotin carboxylase, N-terminal domain LI99_RS11850 PF02436 Conserved carboxylase domain LI99_RS11860 PF01467 Cytidylyltransferase-like LI99_RS11875 PF02620 Large ribosomal RNA subunit accumulation protein YceD LI99_RS11880 PF14622 Ribonuclease-III-like LI99_RS11880 PF00035 Double-stranded RNA binding motif LI99_RS11885 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LI99_RS11885 PF06827 Zinc finger found in FPG and IleRS LI99_RS11885 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LI99_RS11895 PF02566 OsmC-like protein LI99_RS11900 PF00708 Acylphosphatase LI99_RS11905 PF02463 RecF/RecN/SMC N terminal domain LI99_RS11905 PF06470 SMC proteins Flexible Hinge Domain LI99_RS11910 PF02881 SRP54-type protein, helical bundle domain LI99_RS11910 PF00448 SRP54-type protein, GTPase domain LI99_RS11915 PF00909 Ammonium Transporter Family LI99_RS11920 PF00543 Nitrogen regulatory protein P-II LI99_RS11925 PF08335 GlnD PII-uridylyltransferase LI99_RS11925 PF01966 HD domain LI99_RS11935 PF00248 Aldo/keto reductase family LI99_RS11940 PF02881 SRP54-type protein, helical bundle domain LI99_RS11940 PF02978 Signal peptide binding domain LI99_RS11940 PF00448 SRP54-type protein, GTPase domain LI99_RS11945 PF01979 Amidohydrolase family LI99_RS11950 PF00768 D-alanyl-D-alanine carboxypeptidase LI99_RS11955 PF00768 D-alanyl-D-alanine carboxypeptidase LI99_RS11960 PF13577 SnoaL-like domain LI99_RS11965 PF00886 Ribosomal protein S16 LI99_RS11975 PF05239 PRC-barrel domain LI99_RS11975 PF01782 RimM N-terminal domain LI99_RS11980 PF01746 tRNA (Guanine-1)-methyltransferase LI99_RS11990 PF01245 Ribosomal protein L19 LI99_RS11995 PF10502 Signal peptidase, peptidase S26 LI99_RS12000 PF01351 Ribonuclease HII LI99_RS12005 PF10611 Protein of unknown function (DUF2469) LI99_RS12015 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LI99_RS12035 PF00171 Aldehyde dehydrogenase family LI99_RS12040 PF00202 Aminotransferase class-III LI99_RS12045 PF13344 Haloacid dehalogenase-like hydrolase LI99_RS12055 PF00392 Bacterial regulatory proteins, gntR family LI99_RS12055 PF07729 FCD domain LI99_RS12085 PF00005 ABC transporter LI99_RS12095 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS12100 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LI99_RS12100 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LI99_RS12105 PF03450 CO dehydrogenase flavoprotein C-terminal domain LI99_RS12105 PF00941 FAD binding domain in molybdopterin dehydrogenase LI99_RS12110 PF01799 [2Fe-2S] binding domain LI99_RS12110 PF00111 2Fe-2S iron-sulfur cluster binding domain LI99_RS12115 PF01979 Amidohydrolase family LI99_RS12120 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS12120 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS12120 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS12130 PF02515 CoA-transferase family III LI99_RS12155 PF01083 Cutinase LI99_RS12160 PF00248 Aldo/keto reductase family LI99_RS12175 PF01557 Fumarylacetoacetate (FAA) hydrolase family LI99_RS12200 PF09339 IclR helix-turn-helix domain LI99_RS12200 PF01614 Bacterial transcriptional regulator LI99_RS12210 PF01494 FAD binding domain LI99_RS12215 PF08946 Osmosensory transporter coiled coil LI99_RS12215 PF00083 Sugar (and other) transporter LI99_RS12220 PF00202 Aminotransferase class-III LI99_RS12225 PF00171 Aldehyde dehydrogenase family LI99_RS12230 PF00392 Bacterial regulatory proteins, gntR family LI99_RS12230 PF07729 FCD domain LI99_RS12235 PF17645 Arylmalonate decarboxylase LI99_RS12240 PF02913 FAD linked oxidases, C-terminal domain LI99_RS12240 PF01565 FAD binding domain LI99_RS12240 PF13183 4Fe-4S dicluster domain LI99_RS12245 PF07687 Peptidase dimerisation domain LI99_RS12245 PF01546 Peptidase family M20/M25/M40 LI99_RS12250 PF00155 Aminotransferase class I and II LI99_RS12255 PF00557 Metallopeptidase family M24 LI99_RS12255 PF01321 Creatinase/Prolidase N-terminal domain LI99_RS12265 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LI99_RS12265 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LI99_RS12270 PF01425 Amidase LI99_RS12285 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS12290 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS12295 PF00005 ABC transporter LI99_RS12305 PF00694 Aconitase C-terminal domain LI99_RS12310 PF00330 Aconitase family (aconitate hydratase) LI99_RS12325 PF02021 Uncharacterised protein family UPF0102 LI99_RS12330 PF13335 Magnesium chelatase, subunit ChlI C-terminal LI99_RS12330 PF01078 Magnesium chelatase, subunit ChlI LI99_RS12335 PF02481 DNA recombination-mediator protein A LI99_RS12335 PF17782 DprA winged helix domain LI99_RS12340 PF04954 Siderophore-interacting protein LI99_RS12340 PF08021 Siderophore-interacting FAD-binding domain LI99_RS12345 PF01070 FMN-dependent dehydrogenase LI99_RS12360 PF02899 Phage integrase, N-terminal SAM-like domain LI99_RS12360 PF00589 Phage integrase family LI99_RS12365 PF12697 Alpha/beta hydrolase family LI99_RS12375 PF01551 Peptidase family M23 LI99_RS12380 PF00318 Ribosomal protein S2 LI99_RS12385 PF00889 Elongation factor TS LI99_RS12390 PF01425 Amidase LI99_RS12405 PF00005 ABC transporter LI99_RS12415 PF01179 Copper amine oxidase, enzyme domain LI99_RS12415 PF02727 Copper amine oxidase, N2 domain LI99_RS12415 PF02728 Copper amine oxidase, N3 domain LI99_RS12425 PF02595 Glycerate kinase family LI99_RS12430 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LI99_RS12430 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LI99_RS12440 PF07729 FCD domain LI99_RS12440 PF00392 Bacterial regulatory proteins, gntR family LI99_RS12445 PF01220 Dehydroquinase class II LI99_RS12470 PF07690 Major Facilitator Superfamily LI99_RS12475 PF01047 MarR family LI99_RS12480 PF13847 Methyltransferase domain LI99_RS12485 PF00696 Amino acid kinase family LI99_RS12490 PF01765 Ribosome recycling factor LI99_RS12505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI99_RS12505 PF03466 LysR substrate binding domain LI99_RS12510 PF04055 Radical SAM superfamily LI99_RS12515 PF07729 FCD domain LI99_RS12515 PF00392 Bacterial regulatory proteins, gntR family LI99_RS12520 PF04198 Putative sugar-binding domain LI99_RS12530 PF07690 Major Facilitator Superfamily LI99_RS12535 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LI99_RS12535 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LI99_RS12540 PF00171 Aldehyde dehydrogenase family LI99_RS12560 PF01915 Glycosyl hydrolase family 3 C-terminal domain LI99_RS12560 PF14310 Fibronectin type III-like domain LI99_RS12560 PF00933 Glycosyl hydrolase family 3 N terminal domain LI99_RS12565 PF00440 Bacterial regulatory proteins, tetR family LI99_RS12570 PF00067 Cytochrome P450 LI99_RS12595 PF00067 Cytochrome P450 LI99_RS12605 PF03328 HpcH/HpaI aldolase/citrate lyase family LI99_RS12610 PF00106 short chain dehydrogenase LI99_RS12615 PF00743 Flavin-binding monooxygenase-like LI99_RS12620 PF07859 alpha/beta hydrolase fold LI99_RS12630 PF00860 Permease family LI99_RS12655 PF10939 Protein of unknown function (DUF2631) LI99_RS12660 PF03441 FAD binding domain of DNA photolyase LI99_RS12660 PF00875 DNA photolyase LI99_RS12670 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LI99_RS12670 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LI99_RS12670 PF13288 DXP reductoisomerase C-terminal domain LI99_RS12675 PF17820 PDZ domain LI99_RS12675 PF02163 Peptidase family M50 LI99_RS12680 PF04551 GcpE protein LI99_RS12695 PF13305 Tetracyclin repressor-like, C-terminal domain LI99_RS12695 PF00440 Bacterial regulatory proteins, tetR family LI99_RS12715 PF00557 Metallopeptidase family M24 LI99_RS12720 PF07685 CobB/CobQ-like glutamine amidotransferase domain LI99_RS12720 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LI99_RS12730 PF12833 Helix-turn-helix domain LI99_RS12730 PF02311 AraC-like ligand binding domain LI99_RS12740 PF00561 alpha/beta hydrolase fold LI99_RS12745 PF02875 Mur ligase family, glutamate ligase domain LI99_RS12745 PF08245 Mur ligase middle domain LI99_RS12745 PF08443 RimK-like ATP-grasp domain LI99_RS12750 PF00733 Asparagine synthase LI99_RS12750 PF13537 Glutamine amidotransferase domain LI99_RS12755 PF00120 Glutamine synthetase, catalytic domain LI99_RS12760 PF07722 Peptidase C26 LI99_RS12765 PF00171 Aldehyde dehydrogenase family LI99_RS12775 PF00392 Bacterial regulatory proteins, gntR family LI99_RS12775 PF07729 FCD domain LI99_RS12780 PF01614 Bacterial transcriptional regulator LI99_RS12780 PF09339 IclR helix-turn-helix domain LI99_RS12785 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal LI99_RS12785 PF00775 Dioxygenase LI99_RS12790 PF00775 Dioxygenase LI99_RS12795 PF00206 Lyase LI99_RS12795 PF10397 Adenylosuccinate lyase C-terminus LI99_RS12800 PF02627 Carboxymuconolactone decarboxylase family LI99_RS12805 PF07729 FCD domain LI99_RS12805 PF00392 Bacterial regulatory proteins, gntR family LI99_RS12815 PF01891 Cobalt uptake substrate-specific transmembrane region LI99_RS12815 PF13190 PDGLE domain LI99_RS12830 PF00005 ABC transporter LI99_RS12835 PF07992 Pyridine nucleotide-disulphide oxidoreductase LI99_RS12835 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LI99_RS12845 PF06039 Malate:quinone oxidoreductase (Mqo) LI99_RS12850 PF13673 Acetyltransferase (GNAT) domain LI99_RS12855 PF13519 von Willebrand factor type A domain LI99_RS12855 PF07728 AAA domain (dynein-related subfamily) LI99_RS12855 PF17863 AAA lid domain LI99_RS12860 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP LI99_RS12865 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LI99_RS12865 PF07685 CobB/CobQ-like glutamine amidotransferase domain LI99_RS12870 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LI99_RS12870 PF10414 Sirohaem synthase dimerisation region LI99_RS12870 PF14824 Sirohaem biosynthesis protein central LI99_RS12875 PF07690 Major Facilitator Superfamily LI99_RS12885 PF03129 Anticodon binding domain LI99_RS12885 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LI99_RS12885 PF04073 Aminoacyl-tRNA editing domain LI99_RS12900 PF02576 RimP N-terminal domain LI99_RS12900 PF17384 RimP C-terminal SH3 domain LI99_RS12905 PF13184 NusA-like KH domain LI99_RS12905 PF08529 NusA N-terminal domain LI99_RS12910 PF04760 Translation initiation factor IF-2, N-terminal region LI99_RS12910 PF11987 Translation-initiation factor 2 LI99_RS12910 PF00009 Elongation factor Tu GTP binding domain LI99_RS12915 PF02033 Ribosome-binding factor A LI99_RS12920 PF02272 DHHA1 domain LI99_RS12920 PF01368 DHH family LI99_RS12930 PF01209 ubiE/COQ5 methyltransferase family LI99_RS12935 PF00005 ABC transporter LI99_RS12945 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS12950 PF00356 Bacterial regulatory proteins, lacI family LI99_RS12955 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LI99_RS12955 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LI99_RS12975 PF00378 Enoyl-CoA hydratase/isomerase LI99_RS13000 PF01548 Transposase LI99_RS13000 PF02371 Transposase IS116/IS110/IS902 family LI99_RS13005 PF00149 Calcineurin-like phosphoesterase LI99_RS13010 PF01648 4'-phosphopantetheinyl transferase superfamily LI99_RS13010 PF17837 4'-phosphopantetheinyl transferase N-terminal domain LI99_RS13015 PF09142 tRNA Pseudouridine synthase II, C terminal LI99_RS13015 PF01509 TruB family pseudouridylate synthase (N terminal domain) LI99_RS13015 PF16198 tRNA pseudouridylate synthase B C-terminal domain LI99_RS13020 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS13020 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS13020 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS13025 PF00296 Luciferase-like monooxygenase LI99_RS13035 PF01687 Riboflavin kinase LI99_RS13035 PF06574 FAD synthetase LI99_RS13040 PF00312 Ribosomal protein S15 LI99_RS13050 PF00575 S1 RNA binding domain LI99_RS13050 PF01138 3' exoribonuclease family, domain 1 LI99_RS13050 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LI99_RS13050 PF00013 KH domain LI99_RS13055 PF05193 Peptidase M16 inactive domain LI99_RS13055 PF00675 Insulinase (Peptidase family M16) LI99_RS13065 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LI99_RS13065 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LI99_RS13070 PF01037 Lrp/AsnC ligand binding domain LI99_RS13085 PF02720 Domain of unknown function (DUF222) LI99_RS13090 PF01113 Dihydrodipicolinate reductase, N-terminus LI99_RS13090 PF05173 Dihydrodipicolinate reductase, C-terminus LI99_RS13110 PF03328 HpcH/HpaI aldolase/citrate lyase family LI99_RS13120 PF00303 Thymidylate synthase LI99_RS13125 PF00186 Dihydrofolate reductase LI99_RS13130 PF00501 AMP-binding enzyme LI99_RS13135 PF13276 HTH-like domain LI99_RS13135 PF00665 Integrase core domain LI99_RS13140 PF13936 Helix-turn-helix domain LI99_RS13140 PF00665 Integrase core domain LI99_RS13145 PF01527 Transposase LI99_RS13150 PF03176 MMPL family LI99_RS13160 PF06224 Winged helix DNA-binding domain LI99_RS13165 PF00324 Amino acid permease LI99_RS13170 PF00561 alpha/beta hydrolase fold LI99_RS13180 PF02511 Thymidylate synthase complementing protein LI99_RS13185 PF00701 Dihydrodipicolinate synthetase family LI99_RS13190 PF17770 Ribonuclease J C-terminal domain LI99_RS13190 PF12706 Beta-lactamase superfamily domain LI99_RS13190 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LI99_RS13210 PF17854 FtsK alpha domain LI99_RS13210 PF09397 Ftsk gamma domain LI99_RS13210 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LI99_RS13210 PF01580 FtsK/SpoIIIE family LI99_RS13215 PF00583 Acetyltransferase (GNAT) family LI99_RS13220 PF01066 CDP-alcohol phosphatidyltransferase LI99_RS13225 PF00994 Probable molybdopterin binding domain LI99_RS13225 PF18146 Damage-inducible protein CinA KH domain LI99_RS13225 PF02464 Competence-damaged protein LI99_RS13235 PF04012 PspA/IM30 family LI99_RS13245 PF17240 Family of unknown function (DUF5313) LI99_RS13250 PF07858 Limonene-1,2-epoxide hydrolase catalytic domain LI99_RS13260 PF11248 Protein of unknown function (DUF3046) LI99_RS13270 PF01924 Hydrogenase formation hypA family LI99_RS13275 PF01455 HupF/HypC family LI99_RS13285 PF00586 AIR synthase related protein, N-terminal domain LI99_RS13285 PF02769 AIR synthase related protein, C-terminal domain LI99_RS13290 PF13580 SIS domain LI99_RS13310 PF01300 Telomere recombination LI99_RS13310 PF17788 HypF Kae1-like domain LI99_RS13310 PF07503 HypF finger LI99_RS13310 PF00708 Acylphosphatase LI99_RS13315 PF01455 HupF/HypC family LI99_RS13345 PF01106 NifU-like domain LI99_RS13350 PF00374 Nickel-dependent hydrogenase LI99_RS13355 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LI99_RS13355 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal LI99_RS13360 PF02492 CobW/HypB/UreG, nucleotide-binding domain LI99_RS13365 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA LI99_RS13370 PF00154 recA bacterial DNA recombination protein LI99_RS13375 PF02631 RecX family LI99_RS13380 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS13385 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS13390 PF00497 Bacterial extracellular solute-binding proteins, family 3 LI99_RS13395 PF00005 ABC transporter LI99_RS13400 PF00919 Uncharacterized protein family UPF0004 LI99_RS13400 PF04055 Radical SAM superfamily LI99_RS13405 PF04055 Radical SAM superfamily LI99_RS13405 PF00919 Uncharacterized protein family UPF0004 LI99_RS13410 PF03993 Domain of Unknown Function (DUF349) LI99_RS13430 PF01678 Diaminopimelate epimerase LI99_RS13435 PF16360 GTP-binding GTPase Middle Region LI99_RS13435 PF13167 GTP-binding GTPase N-terminal LI99_RS13435 PF01926 50S ribosome-binding GTPase LI99_RS13440 PF00823 PPE family LI99_RS13440 PF08237 PE-PPE domain LI99_RS13445 PF00384 Molybdopterin oxidoreductase LI99_RS13445 PF01568 Molydopterin dinucleotide binding domain LI99_RS13445 PF18364 Molybdopterin oxidoreductase N-terminal domain LI99_RS13455 PF00717 Peptidase S24-like LI99_RS13455 PF01726 LexA DNA binding domain LI99_RS13465 PF01476 LysM domain LI99_RS13470 PF03477 ATP cone domain LI99_RS13475 PF02567 Phenazine biosynthesis-like protein LI99_RS13480 PF12697 Alpha/beta hydrolase family LI99_RS13495 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LI99_RS13495 PF07992 Pyridine nucleotide-disulphide oxidoreductase LI99_RS13505 PF18357 Diphteria toxin repressor SH3 domain LI99_RS13505 PF02742 Iron dependent repressor, metal binding and dimerisation domain LI99_RS13505 PF01325 Iron dependent repressor, N-terminal DNA binding domain LI99_RS13510 PF04545 Sigma-70, region 4 LI99_RS13510 PF04539 Sigma-70 region 3 LI99_RS13510 PF00140 Sigma-70 factor, region 1.2 LI99_RS13510 PF04542 Sigma-70 region 2 LI99_RS13545 PF04545 Sigma-70, region 4 LI99_RS13545 PF04539 Sigma-70 region 3 LI99_RS13545 PF04542 Sigma-70 region 2 LI99_RS13545 PF00140 Sigma-70 factor, region 1.2 LI99_RS13550 PF00480 ROK family LI99_RS13555 PF00459 Inositol monophosphatase family LI99_RS13575 PF00692 dUTPase LI99_RS13600 PF02080 TrkA-C domain LI99_RS13600 PF02254 TrkA-N domain LI99_RS13605 PF02080 TrkA-C domain LI99_RS13605 PF02254 TrkA-N domain LI99_RS13610 PF13520 Amino acid permease LI99_RS13615 PF01938 TRAM domain LI99_RS13615 PF05958 tRNA (Uracil-5-)-methyltransferase LI99_RS13625 PF06965 Na+/H+ antiporter 1 LI99_RS13630 PF02780 Transketolase, C-terminal domain LI99_RS13630 PF02779 Transketolase, pyrimidine binding domain LI99_RS13630 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LI99_RS13635 PF00561 alpha/beta hydrolase fold LI99_RS13640 PF00570 HRDC domain LI99_RS13640 PF01612 3'-5' exonuclease LI99_RS13650 PF01208 Uroporphyrinogen decarboxylase (URO-D) LI99_RS13655 PF01593 Flavin containing amine oxidoreductase LI99_RS13660 PF06778 Chlorite dismutase LI99_RS13670 PF01641 SelR domain LI99_RS13675 PF09594 Glycosyltransferase family 87 LI99_RS13695 PF00583 Acetyltransferase (GNAT) family LI99_RS13710 PF02861 Clp amino terminal domain, pathogenicity island component LI99_RS13715 PF00512 His Kinase A (phospho-acceptor) domain LI99_RS13715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI99_RS13715 PF00672 HAMP domain LI99_RS13720 PF07729 FCD domain LI99_RS13720 PF00392 Bacterial regulatory proteins, gntR family LI99_RS13725 PF07690 Major Facilitator Superfamily LI99_RS13735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI99_RS13735 PF03466 LysR substrate binding domain LI99_RS13740 PF00793 DAHP synthetase I family LI99_RS13750 PF03358 NADPH-dependent FMN reductase LI99_RS13775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI99_RS13775 PF05231 MASE1 LI99_RS13775 PF07730 Histidine kinase LI99_RS13785 PF00072 Response regulator receiver domain LI99_RS13785 PF00196 Bacterial regulatory proteins, luxR family LI99_RS13790 PF00106 short chain dehydrogenase LI99_RS13800 PF07690 Major Facilitator Superfamily LI99_RS13805 PF00296 Luciferase-like monooxygenase LI99_RS13810 PF04116 Fatty acid hydroxylase superfamily LI99_RS13815 PF07730 Histidine kinase LI99_RS13935 PF00384 Molybdopterin oxidoreductase LI99_RS13935 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LI99_RS13935 PF01568 Molydopterin dinucleotide binding domain LI99_RS13945 PF00575 S1 RNA binding domain LI99_RS13945 PF09371 Tex-like protein N-terminal domain LI99_RS13945 PF16921 Tex protein YqgF-like domain LI99_RS13945 PF17674 HHH domain LI99_RS13950 PF09335 SNARE associated Golgi protein LI99_RS13955 PF00296 Luciferase-like monooxygenase LI99_RS13960 PF00296 Luciferase-like monooxygenase LI99_RS13965 PF00296 Luciferase-like monooxygenase LI99_RS13970 PF00005 ABC transporter LI99_RS13970 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LI99_RS13975 PF12911 N-terminal TM domain of oligopeptide transport permease C LI99_RS13975 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS13980 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS13985 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LI99_RS13990 PF07690 Major Facilitator Superfamily LI99_RS13995 PF01638 HxlR-like helix-turn-helix LI99_RS14015 PF02405 Permease MlaE LI99_RS14020 PF02405 Permease MlaE LI99_RS14045 PF02470 MlaD protein LI99_RS14085 PF00890 FAD binding domain LI99_RS14095 PF00890 FAD binding domain LI99_RS14100 PF00355 Rieske [2Fe-2S] domain LI99_RS14110 PF00106 short chain dehydrogenase LI99_RS14115 PF00890 FAD binding domain LI99_RS14125 PF07859 alpha/beta hydrolase fold LI99_RS14130 PF00106 short chain dehydrogenase LI99_RS14140 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS14140 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS14140 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS14145 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS14145 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS14145 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS14150 PF00378 Enoyl-CoA hydratase/isomerase LI99_RS14155 PF00171 Aldehyde dehydrogenase family LI99_RS14160 PF08240 Alcohol dehydrogenase GroES-like domain LI99_RS14160 PF00107 Zinc-binding dehydrogenase LI99_RS14165 PF13193 AMP-binding enzyme C-terminal domain LI99_RS14165 PF00501 AMP-binding enzyme LI99_RS14170 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) LI99_RS14170 PF00890 FAD binding domain LI99_RS14190 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LI99_RS14195 PF07859 alpha/beta hydrolase fold LI99_RS14200 PF01614 Bacterial transcriptional regulator LI99_RS14200 PF09339 IclR helix-turn-helix domain LI99_RS14205 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LI99_RS14210 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS14215 PF00175 Oxidoreductase NAD-binding domain LI99_RS14215 PF00111 2Fe-2S iron-sulfur cluster binding domain LI99_RS14215 PF00970 Oxidoreductase FAD-binding domain LI99_RS14225 PF00106 short chain dehydrogenase LI99_RS14230 PF00296 Luciferase-like monooxygenase LI99_RS14245 PF00106 short chain dehydrogenase LI99_RS14255 PF00561 alpha/beta hydrolase fold LI99_RS14275 PF00296 Luciferase-like monooxygenase LI99_RS14280 PF01638 HxlR-like helix-turn-helix LI99_RS14285 PF00296 Luciferase-like monooxygenase LI99_RS14290 PF01232 Mannitol dehydrogenase Rossmann domain LI99_RS14290 PF08125 Mannitol dehydrogenase C-terminal domain LI99_RS14300 PF13378 Enolase C-terminal domain-like LI99_RS14300 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LI99_RS14305 PF00392 Bacterial regulatory proteins, gntR family LI99_RS14305 PF07729 FCD domain LI99_RS14310 PF00083 Sugar (and other) transporter LI99_RS14315 PF07690 Major Facilitator Superfamily LI99_RS14315 PF00083 Sugar (and other) transporter LI99_RS14320 PF08240 Alcohol dehydrogenase GroES-like domain LI99_RS14320 PF00107 Zinc-binding dehydrogenase LI99_RS14325 PF00561 alpha/beta hydrolase fold LI99_RS14330 PF00512 His Kinase A (phospho-acceptor) domain LI99_RS14330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI99_RS14330 PF00672 HAMP domain LI99_RS14335 PF00072 Response regulator receiver domain LI99_RS14335 PF00486 Transcriptional regulatory protein, C terminal LI99_RS14350 PF02558 Ketopantoate reductase PanE/ApbA LI99_RS14350 PF08546 Ketopantoate reductase PanE/ApbA C terminal LI99_RS14355 PF00248 Aldo/keto reductase family LI99_RS14360 PF00881 Nitroreductase family LI99_RS14375 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LI99_RS14380 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS14385 PF00005 ABC transporter LI99_RS14385 PF00571 CBS domain LI99_RS14390 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS14410 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LI99_RS14410 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LI99_RS14410 PF03129 Anticodon binding domain LI99_RS14415 PF01230 HIT domain LI99_RS14420 PF01066 CDP-alcohol phosphatidyltransferase LI99_RS14425 PF03279 Bacterial lipid A biosynthesis acyltransferase LI99_RS14430 PF13439 Glycosyltransferase Family 4 LI99_RS14435 PF00293 NUDIX domain LI99_RS14440 PF01680 SOR/SNZ family LI99_RS14450 PF01174 SNO glutamine amidotransferase family LI99_RS14455 PF01709 Transcriptional regulator LI99_RS14460 PF13460 NAD(P)H-binding LI99_RS14470 PF02075 Crossover junction endodeoxyribonuclease RuvC LI99_RS14475 PF01330 RuvA N terminal domain LI99_RS14475 PF07499 RuvA, C-terminal domain LI99_RS14480 PF05491 RuvB C-terminal winged helix domain LI99_RS14480 PF17864 RuvB AAA lid domain LI99_RS14480 PF05496 Holliday junction DNA helicase RuvB P-loop domain LI99_RS14490 PF04199 Putative cyclase LI99_RS14495 PF00378 Enoyl-CoA hydratase/isomerase LI99_RS14500 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LI99_RS14500 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LI99_RS14510 PF01799 [2Fe-2S] binding domain LI99_RS14510 PF00111 2Fe-2S iron-sulfur cluster binding domain LI99_RS14515 PF00083 Sugar (and other) transporter LI99_RS14525 PF00356 Bacterial regulatory proteins, lacI family LI99_RS14535 PF00501 AMP-binding enzyme LI99_RS14535 PF07993 Male sterility protein LI99_RS14535 PF00550 Phosphopantetheine attachment site LI99_RS14550 PF00202 Aminotransferase class-III LI99_RS14555 PF02699 Preprotein translocase subunit LI99_RS14560 PF07549 SecD/SecF GG Motif LI99_RS14560 PF02355 Protein export membrane protein LI99_RS14565 PF02355 Protein export membrane protein LI99_RS14565 PF07549 SecD/SecF GG Motif LI99_RS14570 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LI99_RS14575 PF00156 Phosphoribosyl transferase domain LI99_RS14580 PF02824 TGS domain LI99_RS14580 PF13291 ACT domain LI99_RS14580 PF04607 Region found in RelA / SpoT proteins LI99_RS14585 PF00083 Sugar (and other) transporter LI99_RS14590 PF01613 Flavin reductase like domain LI99_RS14600 PF07992 Pyridine nucleotide-disulphide oxidoreductase LI99_RS14600 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LI99_RS14605 PF01522 Polysaccharide deacetylase LI99_RS14610 PF17853 GGDEF-like domain LI99_RS14610 PF13556 PucR C-terminal helix-turn-helix domain LI99_RS14620 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LI99_RS14625 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LI99_RS14630 PF00753 Metallo-beta-lactamase superfamily LI99_RS14635 PF13393 Histidyl-tRNA synthetase LI99_RS14635 PF03129 Anticodon binding domain LI99_RS14645 PF00005 ABC transporter LI99_RS14650 PF00005 ABC transporter LI99_RS14650 PF12399 Branched-chain amino acid ATP-binding cassette transporter LI99_RS14660 PF02653 Branched-chain amino acid transport system / permease component LI99_RS14665 PF13458 Periplasmic binding protein LI99_RS14675 PF00561 alpha/beta hydrolase fold LI99_RS14680 PF05681 Fumarate hydratase (Fumerase) LI99_RS14680 PF05683 Fumarase C-terminus LI99_RS14685 PF01425 Amidase LI99_RS14695 PF00583 Acetyltransferase (GNAT) family LI99_RS14695 PF00795 Carbon-nitrogen hydrolase LI99_RS14700 PF00356 Bacterial regulatory proteins, lacI family LI99_RS14705 PF04055 Radical SAM superfamily LI99_RS14710 PF07690 Major Facilitator Superfamily LI99_RS14715 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS14715 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS14715 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS14720 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS14720 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS14720 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS14755 PF04228 Putative neutral zinc metallopeptidase LI99_RS14760 PF00135 Carboxylesterase family LI99_RS14765 PF10604 Polyketide cyclase / dehydrase and lipid transport LI99_RS14770 PF00152 tRNA synthetases class II (D, K and N) LI99_RS14770 PF02938 GAD domain LI99_RS14770 PF01336 OB-fold nucleic acid binding domain LI99_RS14775 PF04075 F420H(2)-dependent quinone reductase LI99_RS14780 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LI99_RS14780 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LI99_RS14785 PF00465 Iron-containing alcohol dehydrogenase LI99_RS14790 PF00171 Aldehyde dehydrogenase family LI99_RS14795 PF02954 Bacterial regulatory protein, Fis family LI99_RS14795 PF01590 GAF domain LI99_RS14805 PF07859 alpha/beta hydrolase fold LI99_RS14815 PF02803 Thiolase, C-terminal domain LI99_RS14815 PF00108 Thiolase, N-terminal domain LI99_RS14820 PF01638 HxlR-like helix-turn-helix LI99_RS14840 PF14403 Circularly permuted ATP-grasp type 2 LI99_RS14840 PF04168 A predicted alpha-helical domain with a conserved ER motif. LI99_RS14845 PF01841 Transglutaminase-like superfamily LI99_RS14845 PF08379 Bacterial transglutaminase-like N-terminal region LI99_RS14850 PF15887 Putative zinc-binding metallo-peptidase LI99_RS14850 PF10005 zinc-ribbon domain LI99_RS14860 PF12002 MgsA AAA+ ATPase C terminal LI99_RS14860 PF16193 AAA C-terminal domain LI99_RS14860 PF00004 ATPase family associated with various cellular activities (AAA) LI99_RS14875 PF01894 Uncharacterised protein family UPF0047 LI99_RS14880 PF02272 DHHA1 domain LI99_RS14880 PF01411 tRNA synthetases class II (A) LI99_RS14880 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LI99_RS14885 PF03652 Holliday junction resolvase LI99_RS14895 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LI99_RS14895 PF08501 Shikimate dehydrogenase substrate binding domain LI99_RS14895 PF01488 Shikimate / quinate 5-dehydrogenase LI99_RS14905 PF01264 Chorismate synthase LI99_RS14910 PF01202 Shikimate kinase LI99_RS14915 PF01761 3-dehydroquinate synthase LI99_RS14925 PF00557 Metallopeptidase family M24 LI99_RS14925 PF01321 Creatinase/Prolidase N-terminal domain LI99_RS14930 PF01132 Elongation factor P (EF-P) OB domain LI99_RS14930 PF09285 Elongation factor P, C-terminal LI99_RS14930 PF08207 Elongation factor P (EF-P) KOW-like domain LI99_RS14935 PF01029 NusB family LI99_RS14940 PF00196 Bacterial regulatory proteins, luxR family LI99_RS14940 PF00072 Response regulator receiver domain LI99_RS14950 PF01494 FAD binding domain LI99_RS14955 PF00144 Beta-lactamase LI99_RS14965 PF00156 Phosphoribosyl transferase domain LI99_RS14970 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LI99_RS14970 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LI99_RS14975 PF01979 Amidohydrolase family LI99_RS14985 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LI99_RS14985 PF00117 Glutamine amidotransferase class-I LI99_RS14990 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LI99_RS14990 PF02142 MGS-like domain LI99_RS14990 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LI99_RS14995 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LI99_RS15005 PF00625 Guanylate kinase LI99_RS15015 PF01192 RNA polymerase Rpb6 LI99_RS15020 PF04127 DNA / pantothenate metabolism flavoprotein LI99_RS15020 PF02441 Flavoprotein LI99_RS15025 PF00438 S-adenosylmethionine synthetase, N-terminal domain LI99_RS15025 PF02772 S-adenosylmethionine synthetase, central domain LI99_RS15025 PF02773 S-adenosylmethionine synthetase, C-terminal domain LI99_RS15030 PF00005 ABC transporter LI99_RS15030 PF09383 NIL domain LI99_RS15035 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS15040 PF03180 NLPA lipoprotein LI99_RS15045 PF07859 alpha/beta hydrolase fold LI99_RS15050 PF07947 YhhN family LI99_RS15055 PF17764 3′ DNA-binding domain (3′BD) LI99_RS15065 PF04011 LemA family LI99_RS15070 PF00551 Formyl transferase LI99_RS15070 PF02911 Formyl transferase, C-terminal domain LI99_RS15075 PF01029 NusB family LI99_RS15075 PF01189 16S rRNA methyltransferase RsmB/F LI99_RS15080 PF00834 Ribulose-phosphate 3 epimerase family LI99_RS15085 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LI99_RS15085 PF01872 RibD C-terminal domain LI99_RS15095 PF07690 Major Facilitator Superfamily LI99_RS15100 PF07161 LppX_LprAFG lipoprotein LI99_RS15105 PF00677 Lumazine binding domain LI99_RS15110 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LI99_RS15110 PF00925 GTP cyclohydrolase II LI99_RS15115 PF00885 6,7-dimethyl-8-ribityllumazine synthase LI99_RS15120 PF10756 Bacterial PH domain LI99_RS15140 PF01541 GIY-YIG catalytic domain LI99_RS15140 PF02151 UvrB/uvrC motif LI99_RS15140 PF08459 UvrC Helix-hairpin-helix N-terminal LI99_RS15145 PF03668 P-loop ATPase protein family LI99_RS15150 PF01933 Uncharacterised protein family UPF0052 LI99_RS15155 PF14527 WhiA LAGLIDADG-like domain LI99_RS15155 PF10298 WhiA N-terminal LAGLIDADG-like domain LI99_RS15155 PF02650 WhiA C-terminal HTH domain LI99_RS15165 PF08338 Domain of unknown function (DUF1731) LI99_RS15165 PF01370 NAD dependent epimerase/dehydratase family LI99_RS15170 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LI99_RS15170 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LI99_RS15175 PF00162 Phosphoglycerate kinase LI99_RS15180 PF00121 Triosephosphate isomerase LI99_RS15185 PF03840 Preprotein translocase SecG subunit LI99_RS15195 PF01791 DeoC/LacD family aldolase LI99_RS15200 PF02653 Branched-chain amino acid transport system / permease component LI99_RS15205 PF00005 ABC transporter LI99_RS15210 PF04198 Putative sugar-binding domain LI99_RS15215 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LI99_RS15215 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LI99_RS15220 PF08240 Alcohol dehydrogenase GroES-like domain LI99_RS15220 PF00107 Zinc-binding dehydrogenase LI99_RS15225 PF13407 Periplasmic binding protein domain LI99_RS15230 PF00311 Phosphoenolpyruvate carboxylase LI99_RS15240 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LI99_RS15250 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LI99_RS15250 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LI99_RS15255 PF00923 Transaldolase/Fructose-6-phosphate aldolase LI99_RS15260 PF00456 Transketolase, thiamine diphosphate binding domain LI99_RS15260 PF02780 Transketolase, C-terminal domain LI99_RS15260 PF02779 Transketolase, pyrimidine binding domain LI99_RS15270 PF01040 UbiA prenyltransferase family LI99_RS15275 PF08240 Alcohol dehydrogenase GroES-like domain LI99_RS15275 PF00107 Zinc-binding dehydrogenase LI99_RS15285 PF08402 TOBE domain LI99_RS15285 PF00005 ABC transporter LI99_RS15290 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS15295 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS15310 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LI99_RS15310 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LI99_RS15315 PF03437 BtpA family LI99_RS15320 PF00459 Inositol monophosphatase family LI99_RS15325 PF00455 DeoR C terminal sensor domain LI99_RS15325 PF08220 DeoR-like helix-turn-helix domain LI99_RS15340 PF13732 Domain of unknown function (DUF4162) LI99_RS15340 PF00005 ABC transporter LI99_RS15355 PF01458 Uncharacterized protein family (UPF0051) LI99_RS15360 PF01458 Uncharacterized protein family (UPF0051) LI99_RS15365 PF00005 ABC transporter LI99_RS15370 PF00266 Aminotransferase class-V LI99_RS15375 PF01592 NifU-like N terminal domain LI99_RS15380 PF01883 Iron-sulfur cluster assembly protein LI99_RS15400 PF00501 AMP-binding enzyme LI99_RS15410 PF00067 Cytochrome P450 LI99_RS15425 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LI99_RS15425 PF07992 Pyridine nucleotide-disulphide oxidoreductase LI99_RS15430 PF00085 Thioredoxin LI99_RS15435 PF00378 Enoyl-CoA hydratase/isomerase LI99_RS15440 PF12848 ABC transporter LI99_RS15440 PF16326 ABC transporter C-terminal domain LI99_RS15440 PF00005 ABC transporter LI99_RS15450 PF00440 Bacterial regulatory proteins, tetR family LI99_RS15455 PF00330 Aconitase family (aconitate hydratase) LI99_RS15455 PF00694 Aconitase C-terminal domain LI99_RS15465 PF00877 NlpC/P60 family LI99_RS15470 PF00877 NlpC/P60 family LI99_RS15475 PF07726 ATPase family associated with various cellular activities (AAA) LI99_RS15475 PF17863 AAA lid domain LI99_RS15480 PF01882 Protein of unknown function DUF58 LI99_RS15485 PF07584 Aerotolerance regulator N-terminal LI99_RS15485 PF13519 von Willebrand factor type A domain LI99_RS15500 PF00762 Ferrochelatase LI99_RS15515 PF01145 SPFH domain / Band 7 family LI99_RS15525 PF09335 SNARE associated Golgi protein LI99_RS15530 PF01642 Methylmalonyl-CoA mutase LI99_RS15535 PF01642 Methylmalonyl-CoA mutase LI99_RS15535 PF02310 B12 binding domain LI99_RS15550 PF00144 Beta-lactamase LI99_RS15575 PF16197 Ketoacyl-synthetase C-terminal extension LI99_RS15575 PF00698 Acyl transferase domain LI99_RS15575 PF00109 Beta-ketoacyl synthase, N-terminal domain LI99_RS15575 PF02801 Beta-ketoacyl synthase, C-terminal domain LI99_RS15575 PF00550 Phosphopantetheine attachment site LI99_RS15575 PF00668 Condensation domain LI99_RS15580 PF00133 tRNA synthetases class I (I, L, M and V) LI99_RS15580 PF08264 Anticodon-binding domain of tRNA LI99_RS15590 PF11799 impB/mucB/samB family C-terminal domain LI99_RS15590 PF00817 impB/mucB/samB family LI99_RS15590 PF11798 IMS family HHH motif LI99_RS15600 PF00710 Asparaginase, N-terminal LI99_RS15600 PF17763 Glutaminase/Asparaginase C-terminal domain LI99_RS15605 PF01252 Signal peptidase (SPase) II LI99_RS15610 PF00849 RNA pseudouridylate synthase LI99_RS15615 PF00892 EamA-like transporter family LI99_RS15625 PF07733 Bacterial DNA polymerase III alpha NTPase domain LI99_RS15625 PF02811 PHP domain LI99_RS15625 PF14579 Helix-hairpin-helix motif LI99_RS15625 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LI99_RS15635 PF09278 MerR, DNA binding LI99_RS15635 PF00376 MerR family regulatory protein LI99_RS15650 PF00291 Pyridoxal-phosphate dependent enzyme LI99_RS15650 PF00585 C-terminal regulatory domain of Threonine dehydratase LI99_RS15655 PF00128 Alpha amylase, catalytic domain LI99_RS15655 PF11941 Domain of unknown function (DUF3459) LI99_RS15660 PF00128 Alpha amylase, catalytic domain LI99_RS15665 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LI99_RS15665 PF00128 Alpha amylase, catalytic domain LI99_RS15670 PF01757 Acyltransferase family LI99_RS15675 PF00202 Aminotransferase class-III LI99_RS15680 PF00155 Aminotransferase class I and II LI99_RS15700 PF00440 Bacterial regulatory proteins, tetR family LI99_RS15705 PF04055 Radical SAM superfamily LI99_RS15705 PF06968 Biotin and Thiamin Synthesis associated domain LI99_RS15715 PF10821 Protein of unknown function (DUF2567) LI99_RS15720 PF03583 Secretory lipase LI99_RS15725 PF00293 NUDIX domain LI99_RS15730 PF02445 Quinolinate synthetase A protein LI99_RS15735 PF00890 FAD binding domain LI99_RS15735 PF02910 Fumarate reductase flavoprotein C-term LI99_RS15740 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LI99_RS15740 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LI99_RS15750 PF01810 LysE type translocator LI99_RS15760 PF00815 Histidinol dehydrogenase LI99_RS15765 PF00155 Aminotransferase class I and II LI99_RS15770 PF00475 Imidazoleglycerol-phosphate dehydratase LI99_RS15775 PF00117 Glutamine amidotransferase class-I LI99_RS15780 PF00977 Histidine biosynthesis protein LI99_RS15785 PF00459 Inositol monophosphatase family LI99_RS15790 PF00977 Histidine biosynthesis protein LI99_RS15795 PF01502 Phosphoribosyl-AMP cyclohydrolase LI99_RS15810 PF00005 ABC transporter LI99_RS15815 PF00578 AhpC/TSA family LI99_RS15820 PF00425 chorismate binding enzyme LI99_RS15820 PF04715 Anthranilate synthase component I, N terminal region LI99_RS15830 PF00218 Indole-3-glycerol phosphate synthase LI99_RS15835 PF00291 Pyridoxal-phosphate dependent enzyme LI99_RS15840 PF00290 Tryptophan synthase alpha chain LI99_RS15845 PF01790 Prolipoprotein diacylglyceryl transferase LI99_RS15860 PF00310 Glutamine amidotransferases class-II LI99_RS15860 PF04898 Glutamate synthase central domain LI99_RS15860 PF01645 Conserved region in glutamate synthase LI99_RS15860 PF01493 GXGXG motif LI99_RS15865 PF07992 Pyridine nucleotide-disulphide oxidoreductase LI99_RS15865 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LI99_RS15870 PF02887 Pyruvate kinase, alpha/beta domain LI99_RS15870 PF00224 Pyruvate kinase, barrel domain LI99_RS15885 PF00664 ABC transporter transmembrane region LI99_RS15885 PF00005 ABC transporter LI99_RS15890 PF00664 ABC transporter transmembrane region LI99_RS15890 PF00005 ABC transporter LI99_RS15895 PF02322 Cytochrome bd terminal oxidase subunit II LI99_RS15900 PF01654 Cytochrome bd terminal oxidase subunit I LI99_RS15910 PF00497 Bacterial extracellular solute-binding proteins, family 3 LI99_RS15915 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS15920 PF00005 ABC transporter LI99_RS15925 PF00581 Rhodanese-like domain LI99_RS15935 PF00196 Bacterial regulatory proteins, luxR family LI99_RS15935 PF00072 Response regulator receiver domain LI99_RS15945 PF00210 Ferritin-like domain LI99_RS15965 PF03861 ANTAR domain LI99_RS15965 PF00072 Response regulator receiver domain LI99_RS15975 PF02653 Branched-chain amino acid transport system / permease component LI99_RS15980 PF02653 Branched-chain amino acid transport system / permease component LI99_RS15980 PF11862 Domain of unknown function (DUF3382) LI99_RS15985 PF12399 Branched-chain amino acid ATP-binding cassette transporter LI99_RS15985 PF00005 ABC transporter LI99_RS15990 PF00005 ABC transporter LI99_RS15995 PF02694 Uncharacterised BCR, YnfA/UPF0060 family LI99_RS16015 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LI99_RS16015 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LI99_RS16035 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LI99_RS16035 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LI99_RS16050 PF00107 Zinc-binding dehydrogenase LI99_RS16050 PF08240 Alcohol dehydrogenase GroES-like domain LI99_RS16055 PF01547 Bacterial extracellular solute-binding protein LI99_RS16060 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS16065 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS16070 PF08402 TOBE domain LI99_RS16070 PF00005 ABC transporter LI99_RS16075 PF00005 ABC transporter LI99_RS16075 PF17912 MalK OB fold domain LI99_RS16080 PF02734 DAK2 domain LI99_RS16080 PF02733 Dak1 domain LI99_RS16085 PF02502 Ribose/Galactose Isomerase LI99_RS16095 PF13411 MerR HTH family regulatory protein LI99_RS16095 PF06445 GyrI-like small molecule binding domain LI99_RS16105 PF00892 EamA-like transporter family LI99_RS16115 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS16120 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS16130 PF00005 ABC transporter LI99_RS16130 PF08402 TOBE domain LI99_RS16145 PF00180 Isocitrate/isopropylmalate dehydrogenase LI99_RS16155 PF00561 alpha/beta hydrolase fold LI99_RS16165 PF00561 alpha/beta hydrolase fold LI99_RS16195 PF08281 Sigma-70, region 4 LI99_RS16195 PF04542 Sigma-70 region 2 LI99_RS16200 PF00561 alpha/beta hydrolase fold LI99_RS16215 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LI99_RS16215 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LI99_RS16220 PF00296 Luciferase-like monooxygenase LI99_RS16235 PF00171 Aldehyde dehydrogenase family LI99_RS16245 PF00107 Zinc-binding dehydrogenase LI99_RS16260 PF00582 Universal stress protein family LI99_RS16265 PF00291 Pyridoxal-phosphate dependent enzyme LI99_RS16285 PF00480 ROK family LI99_RS16290 PF07690 Major Facilitator Superfamily LI99_RS16305 PF07690 Major Facilitator Superfamily LI99_RS16310 PF01494 FAD binding domain LI99_RS16315 PF16859 Tetracyclin repressor-like, C-terminal domain LI99_RS16315 PF00440 Bacterial regulatory proteins, tetR family LI99_RS16350 PF04107 Glutamate-cysteine ligase family 2(GCS2) LI99_RS16385 PF00440 Bacterial regulatory proteins, tetR family LI99_RS16385 PF02909 Tetracyclin repressor-like, C-terminal domain LI99_RS16400 PF09339 IclR helix-turn-helix domain LI99_RS16400 PF01614 Bacterial transcriptional regulator LI99_RS16405 PF00561 alpha/beta hydrolase fold LI99_RS16405 PF08386 TAP-like protein LI99_RS16415 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LI99_RS16430 PF01548 Transposase LI99_RS16430 PF02371 Transposase IS116/IS110/IS902 family LI99_RS16450 PF00392 Bacterial regulatory proteins, gntR family LI99_RS16450 PF07729 FCD domain LI99_RS16455 PF03328 HpcH/HpaI aldolase/citrate lyase family LI99_RS16460 PF00795 Carbon-nitrogen hydrolase LI99_RS16465 PF03480 Bacterial extracellular solute-binding protein, family 7 LI99_RS16475 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LI99_RS16495 PF00440 Bacterial regulatory proteins, tetR family LI99_RS16520 PF07152 YaeQ protein LI99_RS16530 PF00440 Bacterial regulatory proteins, tetR family LI99_RS16540 PF00378 Enoyl-CoA hydratase/isomerase LI99_RS16555 PF01965 DJ-1/PfpI family LI99_RS16555 PF12833 Helix-turn-helix domain LI99_RS16560 PF01965 DJ-1/PfpI family LI99_RS16575 PF07690 Major Facilitator Superfamily LI99_RS16590 PF01022 Bacterial regulatory protein, arsR family LI99_RS16605 PF00732 GMC oxidoreductase LI99_RS16605 PF05199 GMC oxidoreductase LI99_RS16625 PF00144 Beta-lactamase LI99_RS16635 PF02525 Flavodoxin-like fold LI99_RS16660 PF07690 Major Facilitator Superfamily LI99_RS16660 PF00083 Sugar (and other) transporter LI99_RS16665 PF00171 Aldehyde dehydrogenase family LI99_RS16670 PF08240 Alcohol dehydrogenase GroES-like domain LI99_RS16670 PF00107 Zinc-binding dehydrogenase LI99_RS16680 PF00378 Enoyl-CoA hydratase/isomerase LI99_RS16685 PF02515 CoA-transferase family III LI99_RS16690 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS16690 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS16690 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS16705 PF00106 short chain dehydrogenase LI99_RS16715 PF01546 Peptidase family M20/M25/M40 LI99_RS16715 PF07687 Peptidase dimerisation domain LI99_RS16720 PF00083 Sugar (and other) transporter LI99_RS16720 PF07690 Major Facilitator Superfamily LI99_RS16730 PF01425 Amidase LI99_RS16735 PF03746 LamB/YcsF family LI99_RS16740 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LI99_RS16745 PF00795 Carbon-nitrogen hydrolase LI99_RS16755 PF07690 Major Facilitator Superfamily LI99_RS16765 PF06441 Epoxide hydrolase N terminus LI99_RS16775 PF00107 Zinc-binding dehydrogenase LI99_RS16780 PF00440 Bacterial regulatory proteins, tetR family LI99_RS16780 PF16859 Tetracyclin repressor-like, C-terminal domain LI99_RS16795 PF13411 MerR HTH family regulatory protein LI99_RS16835 PF00083 Sugar (and other) transporter LI99_RS16835 PF07690 Major Facilitator Superfamily LI99_RS16840 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LI99_RS16850 PF04072 Leucine carboxyl methyltransferase LI99_RS16855 PF00440 Bacterial regulatory proteins, tetR family LI99_RS16855 PF18665 Tetracyclin repressor-like, C-terminal domain LI99_RS16860 PF00106 short chain dehydrogenase LI99_RS16885 PF05199 GMC oxidoreductase LI99_RS16885 PF00732 GMC oxidoreductase LI99_RS16895 PF00732 GMC oxidoreductase LI99_RS16895 PF05199 GMC oxidoreductase LI99_RS16900 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LI99_RS16915 PF00756 Putative esterase LI99_RS16915 PF01476 LysM domain LI99_RS16925 PF03315 Serine dehydratase beta chain LI99_RS16925 PF03313 Serine dehydratase alpha chain LI99_RS16935 PF00497 Bacterial extracellular solute-binding proteins, family 3 LI99_RS16945 PF00732 GMC oxidoreductase LI99_RS16945 PF05199 GMC oxidoreductase LI99_RS16960 PF00196 Bacterial regulatory proteins, luxR family LI99_RS16960 PF00072 Response regulator receiver domain LI99_RS16965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI99_RS16965 PF07730 Histidine kinase LI99_RS16975 PF13419 Haloacid dehalogenase-like hydrolase LI99_RS16980 PF00106 short chain dehydrogenase LI99_RS16985 PF08361 MAATS-type transcriptional repressor, C-terminal region LI99_RS16985 PF00440 Bacterial regulatory proteins, tetR family LI99_RS17010 PF07992 Pyridine nucleotide-disulphide oxidoreductase LI99_RS17025 PF01475 Ferric uptake regulator family LI99_RS17030 PF00141 Peroxidase LI99_RS17035 PF00881 Nitroreductase family LI99_RS17045 PF08240 Alcohol dehydrogenase GroES-like domain LI99_RS17045 PF00107 Zinc-binding dehydrogenase LI99_RS17050 PF00501 AMP-binding enzyme LI99_RS17055 PF13193 AMP-binding enzyme C-terminal domain LI99_RS17055 PF00501 AMP-binding enzyme LI99_RS17105 PF00877 NlpC/P60 family LI99_RS17110 PF03070 TENA/THI-4/PQQC family LI99_RS17115 PF08534 Redoxin LI99_RS17125 PF13378 Enolase C-terminal domain-like LI99_RS17125 PF18374 Enolase N-terminal domain-like LI99_RS17145 PF04542 Sigma-70 region 2 LI99_RS17145 PF08281 Sigma-70, region 4 LI99_RS17150 PF06628 Catalase-related immune-responsive LI99_RS17150 PF00199 Catalase LI99_RS17160 PF01965 DJ-1/PfpI family LI99_RS17165 PF13472 GDSL-like Lipase/Acylhydrolase family LI99_RS17185 PF05305 Protein of unknown function (DUF732) LI99_RS17195 PF05423 Mycobacterium membrane protein LI99_RS17200 PF03176 MMPL family LI99_RS17220 PF03883 Peroxide stress protein YaaA LI99_RS17240 PF01425 Amidase LI99_RS17250 PF00274 Fructose-bisphosphate aldolase class-I LI99_RS17275 PF00994 Probable molybdopterin binding domain LI99_RS17275 PF02464 Competence-damaged protein LI99_RS17280 PF17668 Acetyltransferase (GNAT) domain LI99_RS17280 PF13530 Sterol carrier protein domain LI99_RS17310 PF03060 Nitronate monooxygenase LI99_RS17315 PF00440 Bacterial regulatory proteins, tetR family LI99_RS17320 PF01568 Molydopterin dinucleotide binding domain LI99_RS17320 PF00384 Molybdopterin oxidoreductase LI99_RS17320 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LI99_RS17330 PF00067 Cytochrome P450 LI99_RS17350 PF00392 Bacterial regulatory proteins, gntR family LI99_RS17350 PF07729 FCD domain LI99_RS17360 PF03734 L,D-transpeptidase catalytic domain LI99_RS17360 PF17964 Bacterial Ig domain LI99_RS17375 PF00854 POT family LI99_RS17380 PF00291 Pyridoxal-phosphate dependent enzyme LI99_RS17390 PF00491 Arginase family LI99_RS17395 PF00083 Sugar (and other) transporter LI99_RS17425 PF02683 Cytochrome C biogenesis protein transmembrane region LI99_RS17430 PF00578 AhpC/TSA family LI99_RS17455 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS17460 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS17465 PF00005 ABC transporter LI99_RS17470 PF00067 Cytochrome P450 LI99_RS17480 PF01979 Amidohydrolase family LI99_RS17490 PF00795 Carbon-nitrogen hydrolase LI99_RS17495 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LI99_RS17520 PF00120 Glutamine synthetase, catalytic domain LI99_RS17520 PF03951 Glutamine synthetase, beta-Grasp domain LI99_RS17530 PF07690 Major Facilitator Superfamily LI99_RS17535 PF00210 Ferritin-like domain LI99_RS17550 PF00378 Enoyl-CoA hydratase/isomerase LI99_RS17590 PF02903 Alpha amylase, N-terminal ig-like domain LI99_RS17590 PF00128 Alpha amylase, catalytic domain LI99_RS17590 PF16657 Maltogenic Amylase, C-terminal domain LI99_RS17600 PF00512 His Kinase A (phospho-acceptor) domain LI99_RS17600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI99_RS17600 PF00672 HAMP domain LI99_RS17600 PF18698 Histidine kinase sensor domain LI99_RS17605 PF00924 Mechanosensitive ion channel LI99_RS17610 PF00756 Putative esterase LI99_RS17615 PF00106 short chain dehydrogenase LI99_RS17620 PF02190 ATP-dependent protease La (LON) substrate-binding domain LI99_RS17620 PF05362 Lon protease (S16) C-terminal proteolytic domain LI99_RS17620 PF00004 ATPase family associated with various cellular activities (AAA) LI99_RS17630 PF03176 MMPL family LI99_RS17635 PF05423 Mycobacterium membrane protein LI99_RS17640 PF07690 Major Facilitator Superfamily LI99_RS17640 PF00083 Sugar (and other) transporter LI99_RS17645 PF00324 Amino acid permease LI99_RS17660 PF09995 Uncharacterized protein conserved in bacteria (DUF2236) LI99_RS17680 PF14759 Reductase C-terminal LI99_RS17680 PF07992 Pyridine nucleotide-disulphide oxidoreductase LI99_RS17695 PF13407 Periplasmic binding protein domain LI99_RS17700 PF13407 Periplasmic binding protein domain LI99_RS17705 PF02653 Branched-chain amino acid transport system / permease component LI99_RS17710 PF00005 ABC transporter LI99_RS17715 PF00107 Zinc-binding dehydrogenase LI99_RS17715 PF08240 Alcohol dehydrogenase GroES-like domain LI99_RS17725 PF08240 Alcohol dehydrogenase GroES-like domain LI99_RS17725 PF00107 Zinc-binding dehydrogenase LI99_RS17745 PF00296 Luciferase-like monooxygenase LI99_RS17750 PF09364 XFP N-terminal domain LI99_RS17750 PF09363 XFP C-terminal domain LI99_RS17750 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase LI99_RS17770 PF08240 Alcohol dehydrogenase GroES-like domain LI99_RS17785 PF07174 Fibronectin-attachment protein (FAP) LI99_RS17795 PF00296 Luciferase-like monooxygenase LI99_RS17800 PF07992 Pyridine nucleotide-disulphide oxidoreductase LI99_RS17805 PF01774 UreD urease accessory protein LI99_RS17810 PF02492 CobW/HypB/UreG, nucleotide-binding domain LI99_RS17815 PF01730 UreF LI99_RS17820 PF01979 Amidohydrolase family LI99_RS17820 PF00449 Urease alpha-subunit, N-terminal domain LI99_RS17825 PF00699 Urease beta subunit LI99_RS17830 PF00547 Urease, gamma subunit LI99_RS17835 PF03061 Thioesterase superfamily LI99_RS17845 PF03965 Penicillinase repressor LI99_RS17855 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LI99_RS17855 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LI99_RS17860 PF00478 IMP dehydrogenase / GMP reductase domain LI99_RS17860 PF00571 CBS domain LI99_RS17865 PF08402 TOBE domain LI99_RS17865 PF00005 ABC transporter LI99_RS17875 PF01547 Bacterial extracellular solute-binding protein LI99_RS17880 PF01595 Cyclin M transmembrane N-terminal domain LI99_RS17880 PF03471 Transporter associated domain LI99_RS17880 PF00571 CBS domain LI99_RS17885 PF01595 Cyclin M transmembrane N-terminal domain LI99_RS17885 PF00571 CBS domain LI99_RS17895 PF01274 Malate synthase LI99_RS17905 PF02347 Glycine cleavage system P-protein LI99_RS17915 PF13411 MerR HTH family regulatory protein LI99_RS17920 PF02577 Bifunctional nuclease LI99_RS17925 PF00376 MerR family regulatory protein LI99_RS17930 PF00498 FHA domain LI99_RS17935 PF01597 Glycine cleavage H-protein LI99_RS17940 PF05949 Bacterial protein of unknown function (DUF881) LI99_RS17945 PF06947 Protein of unknown function (DUF1290) LI99_RS17950 PF05949 Bacterial protein of unknown function (DUF881) LI99_RS17955 PF01066 CDP-alcohol phosphatidyltransferase LI99_RS17960 PF07517 SecA DEAD-like domain LI99_RS17960 PF01043 SecA preprotein cross-linking domain LI99_RS17960 PF07516 SecA Wing and Scaffold domain LI99_RS17965 PF00005 ABC transporter LI99_RS17965 PF06472 ABC transporter transmembrane region 2 LI99_RS17970 PF00005 ABC transporter LI99_RS17970 PF06472 ABC transporter transmembrane region 2 LI99_RS17975 PF00890 FAD binding domain LI99_RS17985 PF13305 Tetracyclin repressor-like, C-terminal domain LI99_RS17985 PF00440 Bacterial regulatory proteins, tetR family LI99_RS18000 PF00756 Putative esterase LI99_RS18000 PF01476 LysM domain LI99_RS18005 PF01266 FAD dependent oxidoreductase LI99_RS18010 PF00999 Sodium/hydrogen exchanger family LI99_RS18010 PF02254 TrkA-N domain LI99_RS18020 PF04116 Fatty acid hydroxylase superfamily LI99_RS18025 PF00135 Carboxylesterase family LI99_RS18030 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS18030 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS18030 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS18040 PF00893 Small Multidrug Resistance protein LI99_RS18045 PF00893 Small Multidrug Resistance protein LI99_RS18055 PF02446 4-alpha-glucanotransferase LI99_RS18070 PF00970 Oxidoreductase FAD-binding domain LI99_RS18070 PF00111 2Fe-2S iron-sulfur cluster binding domain LI99_RS18075 PF00069 Protein kinase domain LI99_RS18125 PF00501 AMP-binding enzyme LI99_RS18125 PF13193 AMP-binding enzyme C-terminal domain LI99_RS18135 PF00474 Sodium:solute symporter family LI99_RS18140 PF08220 DeoR-like helix-turn-helix domain LI99_RS18140 PF00455 DeoR C terminal sensor domain LI99_RS18150 PF10509 Galactokinase galactose-binding signature LI99_RS18150 PF08544 GHMP kinases C terminal LI99_RS18150 PF00288 GHMP kinases N terminal domain LI99_RS18155 PF00067 Cytochrome P450 LI99_RS18160 PF00501 AMP-binding enzyme LI99_RS18160 PF13193 AMP-binding enzyme C-terminal domain LI99_RS18200 PF00106 short chain dehydrogenase LI99_RS18205 PF07690 Major Facilitator Superfamily LI99_RS18210 PF00463 Isocitrate lyase family LI99_RS18220 PF00199 Catalase LI99_RS18225 PF01292 Prokaryotic cytochrome b561 LI99_RS18255 PF00668 Condensation domain LI99_RS18255 PF13193 AMP-binding enzyme C-terminal domain LI99_RS18255 PF00501 AMP-binding enzyme LI99_RS18255 PF00550 Phosphopantetheine attachment site LI99_RS18285 PF04055 Radical SAM superfamily LI99_RS18285 PF13186 Iron-sulfur cluster-binding domain LI99_RS18295 PF03070 TENA/THI-4/PQQC family LI99_RS18300 PF12706 Beta-lactamase superfamily domain LI99_RS18310 PF13360 PQQ-like domain LI99_RS18310 PF01011 PQQ enzyme repeat LI99_RS18320 PF00141 Peroxidase LI99_RS18325 PF02954 Bacterial regulatory protein, Fis family LI99_RS18325 PF00158 Sigma-54 interaction domain LI99_RS18325 PF01590 GAF domain LI99_RS18350 PF01925 Sulfite exporter TauE/SafE LI99_RS18365 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LI99_RS18365 PF01926 50S ribosome-binding GTPase LI99_RS18370 PF02224 Cytidylate kinase LI99_RS18375 PF01479 S4 domain LI99_RS18375 PF00849 RNA pseudouridylate synthase LI99_RS18380 PF04079 Segregation and condensation complex subunit ScpB LI99_RS18385 PF02616 Segregation and condensation protein ScpA LI99_RS18390 PF13614 AAA domain LI99_RS18395 PF02899 Phage integrase, N-terminal SAM-like domain LI99_RS18395 PF00589 Phage integrase family LI99_RS18400 PF00293 NUDIX domain LI99_RS18405 PF06418 CTP synthase N-terminus LI99_RS18405 PF00117 Glutamine amidotransferase class-I LI99_RS18410 PF11382 Copper transport outer membrane protein, MctB LI99_RS18420 PF02463 RecF/RecN/SMC N terminal domain LI99_RS18425 PF01513 ATP-NAD kinase LI99_RS18430 PF01728 FtsJ-like methyltransferase LI99_RS18430 PF01479 S4 domain LI99_RS18440 PF13344 Haloacid dehalogenase-like hydrolase LI99_RS18440 PF18407 GCN5-related N-acetyltransferase like domain LI99_RS18465 PF00579 tRNA synthetases class I (W and Y) LI99_RS18470 PF02245 Methylpurine-DNA glycosylase (MPG) LI99_RS18485 PF00005 ABC transporter LI99_RS18500 PF03966 Trm112p-like protein LI99_RS18515 PF12848 ABC transporter LI99_RS18515 PF00005 ABC transporter LI99_RS18515 PF16326 ABC transporter C-terminal domain LI99_RS18520 PF14698 Argininosuccinate lyase C-terminal LI99_RS18520 PF00206 Lyase LI99_RS18525 PF00764 Arginosuccinate synthase LI99_RS18530 PF02863 Arginine repressor, C-terminal domain LI99_RS18530 PF01316 Arginine repressor, DNA binding domain LI99_RS18535 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LI99_RS18535 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LI99_RS18540 PF00202 Aminotransferase class-III LI99_RS18545 PF00696 Amino acid kinase family LI99_RS18550 PF01960 ArgJ family LI99_RS18555 PF01118 Semialdehyde dehydrogenase, NAD binding domain LI99_RS18555 PF02774 Semialdehyde dehydrogenase, dimerisation domain LI99_RS18560 PF01588 Putative tRNA binding domain LI99_RS18560 PF03147 Ferredoxin-fold anticodon binding domain LI99_RS18560 PF03483 B3/4 domain LI99_RS18560 PF03484 tRNA synthetase B5 domain LI99_RS18560 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LI99_RS18565 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LI99_RS18565 PF01409 tRNA synthetases class II core domain (F) LI99_RS18585 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS18585 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS18585 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS18590 PF01042 Endoribonuclease L-PSP LI99_RS18595 PF01614 Bacterial transcriptional regulator LI99_RS18595 PF09339 IclR helix-turn-helix domain LI99_RS18600 PF00294 pfkB family carbohydrate kinase LI99_RS18610 PF07969 Amidohydrolase family LI99_RS18615 PF01081 KDPG and KHG aldolase LI99_RS18620 PF02447 GntP family permease LI99_RS18625 PF00588 SpoU rRNA Methylase family LI99_RS18630 PF00453 Ribosomal protein L20 LI99_RS18635 PF01632 Ribosomal protein L35 LI99_RS18640 PF05198 Translation initiation factor IF-3, N-terminal domain LI99_RS18640 PF00707 Translation initiation factor IF-3, C-terminal domain LI99_RS18650 PF16995 Transmembrane region of lysyl-tRNA synthetase LI99_RS18650 PF09924 Uncharacterised conserved protein (DUF2156) LI99_RS18650 PF00152 tRNA synthetases class II (D, K and N) LI99_RS18650 PF01336 OB-fold nucleic acid binding domain LI99_RS18685 PF05481 Mycobacterium 19 kDa lipoprotein antigen LI99_RS18705 PF00440 Bacterial regulatory proteins, tetR family LI99_RS18715 PF17760 UvrA interaction domain LI99_RS18715 PF17755 UvrA DNA-binding domain LI99_RS18715 PF00005 ABC transporter LI99_RS18720 PF00753 Metallo-beta-lactamase superfamily LI99_RS18725 PF00582 Universal stress protein family LI99_RS18745 PF07690 Major Facilitator Superfamily LI99_RS18750 PF17757 UvrB interaction domain LI99_RS18750 PF02151 UvrB/uvrC motif LI99_RS18750 PF04851 Type III restriction enzyme, res subunit LI99_RS18750 PF12344 Ultra-violet resistance protein B LI99_RS18750 PF00271 Helicase conserved C-terminal domain LI99_RS18765 PF04960 Glutaminase LI99_RS18775 PF13520 Amino acid permease LI99_RS18780 PF07729 FCD domain LI99_RS18780 PF00392 Bacterial regulatory proteins, gntR family LI99_RS18790 PF06545 Protein of unknown function (DUF1116) LI99_RS18805 PF00120 Glutamine synthetase, catalytic domain LI99_RS18805 PF03951 Glutamine synthetase, beta-Grasp domain LI99_RS18810 PF00120 Glutamine synthetase, catalytic domain LI99_RS18815 PF07859 alpha/beta hydrolase fold LI99_RS18825 PF00743 Flavin-binding monooxygenase-like LI99_RS18830 PF04229 GrpB protein LI99_RS18830 PF01121 Dephospho-CoA kinase LI99_RS18835 PF00575 S1 RNA binding domain LI99_RS18855 PF13367 PrsW family intramembrane metalloprotease LI99_RS18865 PF01367 5'-3' exonuclease, C-terminal SAM fold LI99_RS18865 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LI99_RS18865 PF00476 DNA polymerase family A LI99_RS18870 PF03466 LysR substrate binding domain LI99_RS18870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI99_RS18875 PF01494 FAD binding domain LI99_RS18895 PF02594 Uncharacterised ACR, YggU family COG1872 LI99_RS18905 PF02728 Copper amine oxidase, N3 domain LI99_RS18905 PF02727 Copper amine oxidase, N2 domain LI99_RS18905 PF01179 Copper amine oxidase, enzyme domain LI99_RS18910 PF00135 Carboxylesterase family LI99_RS18920 PF00296 Luciferase-like monooxygenase LI99_RS18925 PF09084 NMT1/THI5 like LI99_RS18930 PF00005 ABC transporter LI99_RS18935 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS18945 PF00486 Transcriptional regulatory protein, C terminal LI99_RS18945 PF00072 Response regulator receiver domain LI99_RS18955 PF13397 RNA polymerase-binding protein LI99_RS18960 PF00535 Glycosyl transferase family 2 LI99_RS18965 PF00795 Carbon-nitrogen hydrolase LI99_RS18970 PF01979 Amidohydrolase family LI99_RS18985 PF02514 CobN/Magnesium Chelatase LI99_RS19000 PF17863 AAA lid domain LI99_RS19000 PF07726 ATPase family associated with various cellular activities (AAA) LI99_RS19015 PF02668 Taurine catabolism dioxygenase TauD, TfdA family LI99_RS19025 PF02570 Precorrin-8X methylmutase LI99_RS19030 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LI99_RS19045 PF02571 Precorrin-6x reductase CbiJ/CobK LI99_RS19050 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LI99_RS19055 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LI99_RS19060 PF00106 short chain dehydrogenase LI99_RS19065 PF01243 Pyridoxamine 5'-phosphate oxidase LI99_RS19070 PF00557 Metallopeptidase family M24 LI99_RS19070 PF01321 Creatinase/Prolidase N-terminal domain LI99_RS19080 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LI99_RS19080 PF01367 5'-3' exonuclease, C-terminal SAM fold LI99_RS19085 PF14230 Domain of unknown function (DUF4333) LI99_RS19090 PF08148 DSHCT (NUC185) domain LI99_RS19090 PF00271 Helicase conserved C-terminal domain LI99_RS19090 PF00270 DEAD/DEAH box helicase LI99_RS19095 PF00902 Sec-independent protein translocase protein (TatC) LI99_RS19100 PF02416 mttA/Hcf106 family LI99_RS19105 PF13280 WYL domain LI99_RS19110 PF13280 WYL domain LI99_RS19115 PF03136 Pup-ligase protein LI99_RS19135 PF00227 Proteasome subunit LI99_RS19140 PF00227 Proteasome subunit LI99_RS19145 PF05639 Pup-like protein LI99_RS19150 PF03136 Pup-ligase protein LI99_RS19155 PF05721 Phytanoyl-CoA dioxygenase (PhyH) LI99_RS19160 PF06339 Ectoine synthase LI99_RS19165 PF00202 Aminotransferase class-III LI99_RS19170 PF00583 Acetyltransferase (GNAT) family LI99_RS19175 PF17758 Proteasomal ATPase OB N-terminal domain LI99_RS19175 PF00004 ATPase family associated with various cellular activities (AAA) LI99_RS19175 PF16450 Proteasomal ATPase OB C-terminal domain LI99_RS19190 PF04456 Protein of unknown function (DUF503) LI99_RS19195 PF08704 tRNA methyltransferase complex GCD14 subunit LI99_RS19235 PF08240 Alcohol dehydrogenase GroES-like domain LI99_RS19235 PF00107 Zinc-binding dehydrogenase LI99_RS19275 PF04978 Protein of unknown function (DUF664) LI99_RS19280 PF13193 AMP-binding enzyme C-terminal domain LI99_RS19280 PF00668 Condensation domain LI99_RS19280 PF00550 Phosphopantetheine attachment site LI99_RS19280 PF00975 Thioesterase domain LI99_RS19280 PF00501 AMP-binding enzyme LI99_RS19285 PF16123 Hydroxyacylglutathione hydrolase C-terminus LI99_RS19285 PF00753 Metallo-beta-lactamase superfamily LI99_RS19290 PF00689 Cation transporting ATPase, C-terminus LI99_RS19290 PF00690 Cation transporter/ATPase, N-terminus LI99_RS19310 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B LI99_RS19310 PF00175 Oxidoreductase NAD-binding domain LI99_RS19320 PF00011 Hsp20/alpha crystallin family LI99_RS19325 PF00391 PEP-utilising enzyme, mobile domain LI99_RS19325 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LI99_RS19325 PF02896 PEP-utilising enzyme, TIM barrel domain LI99_RS19335 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus LI99_RS19340 PF00582 Universal stress protein family LI99_RS19350 PF00582 Universal stress protein family LI99_RS19355 PF00582 Universal stress protein family LI99_RS19360 PF07730 Histidine kinase LI99_RS19360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI99_RS19360 PF13492 GAF domain LI99_RS19360 PF13185 GAF domain LI99_RS19375 PF00072 Response regulator receiver domain LI99_RS19375 PF00196 Bacterial regulatory proteins, luxR family LI99_RS19380 PF00582 Universal stress protein family LI99_RS19390 PF06974 Protein of unknown function (DUF1298) LI99_RS19390 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain LI99_RS19405 PF00582 Universal stress protein family LI99_RS19420 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LI99_RS19420 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LI99_RS19425 PF03632 Glycosyl hydrolase family 65 central catalytic domain LI99_RS19425 PF03636 Glycosyl hydrolase family 65, N-terminal domain LI99_RS19425 PF02358 Trehalose-phosphatase LI99_RS19425 PF03633 Glycosyl hydrolase family 65, C-terminal domain LI99_RS19440 PF02720 Domain of unknown function (DUF222) LI99_RS19450 PF07729 FCD domain LI99_RS19450 PF00392 Bacterial regulatory proteins, gntR family LI99_RS19460 PF00440 Bacterial regulatory proteins, tetR family LI99_RS19465 PF01070 FMN-dependent dehydrogenase LI99_RS19470 PF00205 Thiamine pyrophosphate enzyme, central domain LI99_RS19470 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LI99_RS19470 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LI99_RS19485 PF13280 WYL domain LI99_RS19485 PF08279 HTH domain LI99_RS19495 PF01425 Amidase LI99_RS19505 PF02538 Hydantoinase B/oxoprolinase LI99_RS19510 PF01968 Hydantoinase/oxoprolinase LI99_RS19510 PF05378 Hydantoinase/oxoprolinase N-terminal region LI99_RS19525 PF17932 Tetracyclin repressor-like, C-terminal domain LI99_RS19525 PF00440 Bacterial regulatory proteins, tetR family LI99_RS19535 PF00144 Beta-lactamase LI99_RS19545 PF07729 FCD domain LI99_RS19545 PF00392 Bacterial regulatory proteins, gntR family LI99_RS19550 PF02515 CoA-transferase family III LI99_RS19555 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS19555 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS19555 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS19560 PF02515 CoA-transferase family III LI99_RS19565 PF02371 Transposase IS116/IS110/IS902 family LI99_RS19565 PF01548 Transposase LI99_RS19570 PF00083 Sugar (and other) transporter LI99_RS19570 PF08946 Osmosensory transporter coiled coil LI99_RS19575 PF13193 AMP-binding enzyme C-terminal domain LI99_RS19575 PF00501 AMP-binding enzyme LI99_RS19580 PF04205 FMN-binding domain LI99_RS19580 PF00890 FAD binding domain LI99_RS19590 PF01546 Peptidase family M20/M25/M40 LI99_RS19590 PF07687 Peptidase dimerisation domain LI99_RS19595 PF00083 Sugar (and other) transporter LI99_RS19605 PF00083 Sugar (and other) transporter LI99_RS19615 PF00106 short chain dehydrogenase LI99_RS19620 PF01546 Peptidase family M20/M25/M40 LI99_RS19625 PF01979 Amidohydrolase family LI99_RS19640 PF13407 Periplasmic binding protein domain LI99_RS19645 PF00005 ABC transporter LI99_RS19650 PF02653 Branched-chain amino acid transport system / permease component LI99_RS19655 PF08240 Alcohol dehydrogenase GroES-like domain LI99_RS19655 PF00107 Zinc-binding dehydrogenase LI99_RS19675 PF13556 PucR C-terminal helix-turn-helix domain LI99_RS19675 PF07905 Purine catabolism regulatory protein-like family LI99_RS19675 PF17853 GGDEF-like domain LI99_RS19685 PF14226 non-haem dioxygenase in morphine synthesis N-terminal LI99_RS19685 PF03171 2OG-Fe(II) oxygenase superfamily LI99_RS19690 PF00970 Oxidoreductase FAD-binding domain LI99_RS19690 PF00111 2Fe-2S iron-sulfur cluster binding domain LI99_RS19700 PF00860 Permease family LI99_RS19705 PF01979 Amidohydrolase family LI99_RS19715 PF01546 Peptidase family M20/M25/M40 LI99_RS19730 PF13193 AMP-binding enzyme C-terminal domain LI99_RS19730 PF00501 AMP-binding enzyme LI99_RS19735 PF00378 Enoyl-CoA hydratase/isomerase LI99_RS19740 PF08361 MAATS-type transcriptional repressor, C-terminal region LI99_RS19740 PF00440 Bacterial regulatory proteins, tetR family LI99_RS19745 PF07992 Pyridine nucleotide-disulphide oxidoreductase LI99_RS19745 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LI99_RS19755 PF03466 LysR substrate binding domain LI99_RS19755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI99_RS19785 PF00107 Zinc-binding dehydrogenase LI99_RS19785 PF08240 Alcohol dehydrogenase GroES-like domain LI99_RS19790 PF00440 Bacterial regulatory proteins, tetR family LI99_RS19795 PF13460 NAD(P)H-binding LI99_RS19805 PF00501 AMP-binding enzyme LI99_RS19805 PF13193 AMP-binding enzyme C-terminal domain LI99_RS19815 PF00171 Aldehyde dehydrogenase family LI99_RS19820 PF08240 Alcohol dehydrogenase GroES-like domain LI99_RS19820 PF00107 Zinc-binding dehydrogenase LI99_RS19825 PF00881 Nitroreductase family LI99_RS19830 PF04444 Catechol dioxygenase N terminus LI99_RS19830 PF00775 Dioxygenase LI99_RS19835 PF00392 Bacterial regulatory proteins, gntR family LI99_RS19835 PF07729 FCD domain LI99_RS19855 PF02515 CoA-transferase family III LI99_RS19860 PF16123 Hydroxyacylglutathione hydrolase C-terminus LI99_RS19860 PF00753 Metallo-beta-lactamase superfamily LI99_RS19870 PF07690 Major Facilitator Superfamily LI99_RS19895 PF07729 FCD domain LI99_RS19895 PF00392 Bacterial regulatory proteins, gntR family LI99_RS19900 PF00083 Sugar (and other) transporter LI99_RS19900 PF07690 Major Facilitator Superfamily LI99_RS19910 PF00155 Aminotransferase class I and II LI99_RS19920 PF01425 Amidase LI99_RS19930 PF00107 Zinc-binding dehydrogenase LI99_RS19930 PF08240 Alcohol dehydrogenase GroES-like domain LI99_RS19935 PF00501 AMP-binding enzyme LI99_RS19935 PF13193 AMP-binding enzyme C-terminal domain LI99_RS19965 PF00440 Bacterial regulatory proteins, tetR family LI99_RS19975 PF13607 Succinyl-CoA ligase like flavodoxin domain LI99_RS19975 PF00583 Acetyltransferase (GNAT) family LI99_RS19975 PF13380 CoA binding domain LI99_RS19980 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS19980 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS19980 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS19985 PF00378 Enoyl-CoA hydratase/isomerase LI99_RS19990 PF00083 Sugar (and other) transporter LI99_RS19995 PF00561 alpha/beta hydrolase fold LI99_RS20005 PF02371 Transposase IS116/IS110/IS902 family LI99_RS20005 PF01548 Transposase LI99_RS20010 PF00296 Luciferase-like monooxygenase LI99_RS20015 PF00296 Luciferase-like monooxygenase LI99_RS20025 PF00296 Luciferase-like monooxygenase LI99_RS20030 PF00296 Luciferase-like monooxygenase LI99_RS20035 PF07690 Major Facilitator Superfamily LI99_RS20035 PF00083 Sugar (and other) transporter LI99_RS20060 PF00296 Luciferase-like monooxygenase LI99_RS20065 PF00296 Luciferase-like monooxygenase LI99_RS20070 PF00248 Aldo/keto reductase family LI99_RS20085 PF00296 Luciferase-like monooxygenase LI99_RS20090 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS20090 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS20095 PF00005 ABC transporter LI99_RS20095 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LI99_RS20100 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS20100 PF12911 N-terminal TM domain of oligopeptide transport permease C LI99_RS20105 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS20110 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LI99_RS20120 PF00296 Luciferase-like monooxygenase LI99_RS20145 PF02233 NAD(P) transhydrogenase beta subunit LI99_RS20150 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LI99_RS20150 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LI99_RS20150 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch LI99_RS20155 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LI99_RS20155 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LI99_RS20160 PF02515 CoA-transferase family III LI99_RS20165 PF13193 AMP-binding enzyme C-terminal domain LI99_RS20165 PF00501 AMP-binding enzyme LI99_RS20170 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS20170 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS20170 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS20175 PF00378 Enoyl-CoA hydratase/isomerase LI99_RS20180 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LI99_RS20180 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LI99_RS20185 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LI99_RS20185 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LI99_RS20195 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS20195 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS20195 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS20200 PF00378 Enoyl-CoA hydratase/isomerase LI99_RS20205 PF02515 CoA-transferase family III LI99_RS20210 PF07729 FCD domain LI99_RS20210 PF00392 Bacterial regulatory proteins, gntR family LI99_RS20215 PF00083 Sugar (and other) transporter LI99_RS20215 PF07690 Major Facilitator Superfamily LI99_RS20235 PF00857 Isochorismatase family LI99_RS20280 PF08338 Domain of unknown function (DUF1731) LI99_RS20280 PF01370 NAD dependent epimerase/dehydratase family LI99_RS20290 PF00795 Carbon-nitrogen hydrolase LI99_RS20300 PF00155 Aminotransferase class I and II LI99_RS20300 PF00392 Bacterial regulatory proteins, gntR family LI99_RS20310 PF00440 Bacterial regulatory proteins, tetR family LI99_RS20310 PF18665 Tetracyclin repressor-like, C-terminal domain LI99_RS20320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI99_RS20320 PF03466 LysR substrate binding domain LI99_RS20330 PF08240 Alcohol dehydrogenase GroES-like domain LI99_RS20330 PF00107 Zinc-binding dehydrogenase LI99_RS20335 PF07690 Major Facilitator Superfamily LI99_RS20340 PF07859 alpha/beta hydrolase fold LI99_RS20345 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation LI99_RS20345 PF01118 Semialdehyde dehydrogenase, NAD binding domain LI99_RS20350 PF00682 HMGL-like LI99_RS20350 PF07836 DmpG-like communication domain LI99_RS20360 PF00111 2Fe-2S iron-sulfur cluster binding domain LI99_RS20360 PF00970 Oxidoreductase FAD-binding domain LI99_RS20365 PF00067 Cytochrome P450 LI99_RS20370 PF00872 Transposase, Mutator family LI99_RS20375 PF02899 Phage integrase, N-terminal SAM-like domain LI99_RS20375 PF00589 Phage integrase family LI99_RS20380 PF00589 Phage integrase family LI99_RS20380 PF02899 Phage integrase, N-terminal SAM-like domain LI99_RS20390 PF00872 Transposase, Mutator family LI99_RS20410 PF00378 Enoyl-CoA hydratase/isomerase LI99_RS20415 PF00171 Aldehyde dehydrogenase family LI99_RS20420 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS20420 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS20420 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS20425 PF08240 Alcohol dehydrogenase GroES-like domain LI99_RS20425 PF00107 Zinc-binding dehydrogenase LI99_RS20430 PF01144 Coenzyme A transferase LI99_RS20440 PF00005 ABC transporter LI99_RS20445 PF02653 Branched-chain amino acid transport system / permease component LI99_RS20460 PF09339 IclR helix-turn-helix domain LI99_RS20460 PF01614 Bacterial transcriptional regulator LI99_RS20465 PF01022 Bacterial regulatory protein, arsR family LI99_RS20475 PF03358 NADPH-dependent FMN reductase LI99_RS20480 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LI99_RS20480 PF00403 Heavy-metal-associated domain LI99_RS20480 PF07992 Pyridine nucleotide-disulphide oxidoreductase LI99_RS20490 PF01634 ATP phosphoribosyltransferase LI99_RS20490 PF08029 HisG, C-terminal domain LI99_RS20495 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LI99_RS20500 PF00083 Sugar (and other) transporter LI99_RS20505 PF13419 Haloacid dehalogenase-like hydrolase LI99_RS20515 PF02310 B12 binding domain LI99_RS20515 PF00809 Pterin binding enzyme LI99_RS20515 PF02574 Homocysteine S-methyltransferase LI99_RS20515 PF02607 B12 binding domain LI99_RS20515 PF02965 Vitamin B12 dependent methionine synthase, activation domain LI99_RS20535 PF01406 tRNA synthetases class I (C) catalytic domain LI99_RS20540 PF00459 Inositol monophosphatase family LI99_RS20560 PF02673 Bacitracin resistance protein BacA LI99_RS20580 PF01180 Dihydroorotate dehydrogenase LI99_RS20585 PF01161 Phosphatidylethanolamine-binding protein LI99_RS20590 PF01546 Peptidase family M20/M25/M40 LI99_RS20590 PF07687 Peptidase dimerisation domain LI99_RS20605 PF00082 Subtilase family LI99_RS20615 PF00196 Bacterial regulatory proteins, luxR family LI99_RS20615 PF00072 Response regulator receiver domain LI99_RS20620 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LI99_RS20620 PF01568 Molydopterin dinucleotide binding domain LI99_RS20620 PF00384 Molybdopterin oxidoreductase LI99_RS20625 PF00582 Universal stress protein family LI99_RS20630 PF01970 Tripartite tricarboxylate transporter TctA family LI99_RS20640 PF03401 Tripartite tricarboxylate transporter family receptor LI99_RS20645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI99_RS20645 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LI99_RS20650 PF04703 FaeA-like protein LI99_RS20650 PF00072 Response regulator receiver domain LI99_RS20655 PF00067 Cytochrome P450 LI99_RS20660 PF02540 NAD synthase LI99_RS20660 PF00958 GMP synthase C terminal domain LI99_RS20660 PF00117 Glutamine amidotransferase class-I LI99_RS20665 PF00156 Phosphoribosyl transferase domain LI99_RS20665 PF05139 Erythromycin esterase LI99_RS20675 PF05103 DivIVA protein LI99_RS20685 PF04472 Cell division protein SepF LI99_RS20690 PF01168 Alanine racemase, N-terminal domain LI99_RS20695 PF02578 Multi-copper polyphenol oxidoreductase laccase LI99_RS20700 PF12327 FtsZ family, C-terminal domain LI99_RS20700 PF00091 Tubulin/FtsZ family, GTPase domain LI99_RS20710 PF08478 POTRA domain, FtsQ-type LI99_RS20710 PF03799 Cell division protein FtsQ LI99_RS20715 PF01225 Mur ligase family, catalytic domain LI99_RS20715 PF08245 Mur ligase middle domain LI99_RS20715 PF02875 Mur ligase family, glutamate ligase domain LI99_RS20720 PF04101 Glycosyltransferase family 28 C-terminal domain LI99_RS20720 PF03033 Glycosyltransferase family 28 N-terminal domain LI99_RS20725 PF01098 Cell cycle protein LI99_RS20730 PF02875 Mur ligase family, glutamate ligase domain LI99_RS20730 PF08245 Mur ligase middle domain LI99_RS20735 PF00953 Glycosyl transferase family 4 LI99_RS20735 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 LI99_RS20740 PF01225 Mur ligase family, catalytic domain LI99_RS20740 PF02875 Mur ligase family, glutamate ligase domain LI99_RS20740 PF08245 Mur ligase middle domain LI99_RS20745 PF02875 Mur ligase family, glutamate ligase domain LI99_RS20745 PF01225 Mur ligase family, catalytic domain LI99_RS20745 PF08245 Mur ligase middle domain LI99_RS20750 PF00905 Penicillin binding protein transpeptidase domain LI99_RS20750 PF03717 Penicillin-binding Protein dimerisation domain LI99_RS20760 PF01795 MraW methylase family LI99_RS20765 PF02381 MraZ protein, putative antitoxin-like LI99_RS20785 PF00348 Polyprenyl synthetase LI99_RS20795 PF18367 Rv2175c C-terminal domain of unknown function LI99_RS20800 PF00069 Protein kinase domain LI99_RS20805 PF01474 Class-II DAHP synthetase family LI99_RS20810 PF16473 3' exoribonuclease, RNase T-like LI99_RS20820 PF09594 Glycosyltransferase family 87 LI99_RS20825 PF01553 Acyltransferase LI99_RS20835 PF17886 HSP20-like domain found in ArsA LI99_RS20835 PF02374 Anion-transporting ATPase LI99_RS20850 PF00501 AMP-binding enzyme LI99_RS20855 PF13439 Glycosyltransferase Family 4 LI99_RS20855 PF00534 Glycosyl transferases group 1 LI99_RS20865 PF00877 NlpC/P60 family LI99_RS20875 PF00591 Glycosyl transferase family, a/b domain LI99_RS20875 PF02885 Glycosyl transferase family, helical bundle domain LI99_RS20880 PF00510 Cytochrome c oxidase subunit III LI99_RS20885 PF00034 Cytochrome c LI99_RS20885 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LI99_RS20890 PF00355 Rieske [2Fe-2S] domain LI99_RS20895 PF13631 Cytochrome b(N-terminal)/b6/petB LI99_RS20905 PF05423 Mycobacterium membrane protein LI99_RS20910 PF12270 Cytochrome c oxidase subunit IV LI99_RS20915 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LI99_RS20920 PF13537 Glutamine amidotransferase domain LI99_RS20920 PF00733 Asparagine synthase LI99_RS20925 PF00294 pfkB family carbohydrate kinase LI99_RS20935 PF01521 Iron-sulphur cluster biosynthesis LI99_RS20940 PF11241 Protein of unknown function (DUF3043) LI99_RS20950 PF02277 Phosphoribosyltransferase LI99_RS20955 PF02654 Cobalamin-5-phosphate synthase LI99_RS20960 PF01063 Amino-transferase class IV LI99_RS20965 PF01571 Aminomethyltransferase folate-binding domain LI99_RS20965 PF08669 Glycine cleavage T-protein C-terminal barrel domain LI99_RS20970 PF16701 Adenylate cyclase regulatory domain LI99_RS20970 PF00211 Adenylate and Guanylate cyclase catalytic domain LI99_RS20975 PF02789 Cytosol aminopeptidase family, N-terminal domain LI99_RS20975 PF00883 Cytosol aminopeptidase family, catalytic domain LI99_RS20980 PF00106 short chain dehydrogenase LI99_RS20980 PF00561 alpha/beta hydrolase fold LI99_RS20990 PF02817 e3 binding domain LI99_RS20990 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LI99_RS20990 PF00364 Biotin-requiring enzyme LI99_RS20995 PF01370 NAD dependent epimerase/dehydratase family LI99_RS20995 PF08338 Domain of unknown function (DUF1731) LI99_RS21000 PF03099 Biotin/lipoate A/B protein ligase family LI99_RS21005 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family LI99_RS21005 PF04055 Radical SAM superfamily LI99_RS21010 PF13829 Domain of unknown function (DUF4191) LI99_RS21015 PF07969 Amidohydrolase family LI99_RS21025 PF03951 Glutamine synthetase, beta-Grasp domain LI99_RS21025 PF00120 Glutamine synthetase, catalytic domain LI99_RS21030 PF02580 D-Tyr-tRNA(Tyr) deacylase LI99_RS21035 PF07681 DoxX LI99_RS21040 PF03710 Glutamate-ammonia ligase adenylyltransferase LI99_RS21040 PF08335 GlnD PII-uridylyltransferase LI99_RS21045 PF00120 Glutamine synthetase, catalytic domain LI99_RS21045 PF03951 Glutamine synthetase, beta-Grasp domain LI99_RS21050 PF00561 alpha/beta hydrolase fold LI99_RS21050 PF08386 TAP-like protein LI99_RS21055 PF00561 alpha/beta hydrolase fold LI99_RS21060 PF06974 Protein of unknown function (DUF1298) LI99_RS21060 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain LI99_RS21065 PF02548 Ketopantoate hydroxymethyltransferase LI99_RS21070 PF00378 Enoyl-CoA hydratase/isomerase LI99_RS21075 PF17932 Tetracyclin repressor-like, C-terminal domain LI99_RS21075 PF00440 Bacterial regulatory proteins, tetR family LI99_RS21080 PF00501 AMP-binding enzyme LI99_RS21085 PF05235 CHAD domain LI99_RS21085 PF01928 CYTH domain LI99_RS21090 PF07992 Pyridine nucleotide-disulphide oxidoreductase LI99_RS21090 PF13192 Thioredoxin domain LI99_RS21095 PF01381 Helix-turn-helix LI99_RS21100 PF13456 Reverse transcriptase-like LI99_RS21100 PF00300 Histidine phosphatase superfamily (branch 1) LI99_RS21105 PF02591 C4-type zinc ribbon domain LI99_RS21110 PF01784 NIF3 (NGG1p interacting factor 3) LI99_RS21115 PF13419 Haloacid dehalogenase-like hydrolase LI99_RS21120 PF01451 Low molecular weight phosphotyrosine protein phosphatase LI99_RS21125 PF02104 SURF1 family LI99_RS21130 PF03186 CobD/Cbib protein LI99_RS21150 PF02805 Metal binding domain of Ada LI99_RS21150 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LI99_RS21150 PF12833 Helix-turn-helix domain LI99_RS21150 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LI99_RS21155 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA LI99_RS21170 PF00578 AhpC/TSA family LI99_RS21175 PF11253 Protein of unknown function (DUF3052) LI99_RS21185 PF17831 Pyruvate dehydrogenase E1 component middle domain LI99_RS21185 PF00456 Transketolase, thiamine diphosphate binding domain LI99_RS21190 PF13556 PucR C-terminal helix-turn-helix domain LI99_RS21190 PF17853 GGDEF-like domain LI99_RS21195 PF00698 Acyl transferase domain LI99_RS21200 PF00550 Phosphopantetheine attachment site LI99_RS21205 PF02801 Beta-ketoacyl synthase, C-terminal domain LI99_RS21205 PF00109 Beta-ketoacyl synthase, N-terminal domain LI99_RS21210 PF02801 Beta-ketoacyl synthase, C-terminal domain LI99_RS21210 PF00109 Beta-ketoacyl synthase, N-terminal domain LI99_RS21215 PF01039 Carboxyl transferase domain LI99_RS21225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI99_RS21225 PF03466 LysR substrate binding domain LI99_RS21230 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LI99_RS21230 PF01266 FAD dependent oxidoreductase LI99_RS21235 PF00440 Bacterial regulatory proteins, tetR family LI99_RS21240 PF01565 FAD binding domain LI99_RS21240 PF02913 FAD linked oxidases, C-terminal domain LI99_RS21245 PF00781 Diacylglycerol kinase catalytic domain LI99_RS21260 PF13847 Methyltransferase domain LI99_RS21265 PF00196 Bacterial regulatory proteins, luxR family LI99_RS21265 PF00072 Response regulator receiver domain LI99_RS21270 PF00107 Zinc-binding dehydrogenase LI99_RS21270 PF08240 Alcohol dehydrogenase GroES-like domain LI99_RS21305 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LI99_RS21305 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LI99_RS21335 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LI99_RS21340 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS21345 PF12911 N-terminal TM domain of oligopeptide transport permease C LI99_RS21345 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS21350 PF00005 ABC transporter LI99_RS21350 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LI99_RS21360 PF08940 Domain of unknown function (DUF1918) LI99_RS21385 PF14032 PknH-like extracellular domain LI99_RS21385 PF00069 Protein kinase domain LI99_RS21390 PF03069 Acetamidase/Formamidase family LI99_RS21405 PF00111 2Fe-2S iron-sulfur cluster binding domain LI99_RS21410 PF00355 Rieske [2Fe-2S] domain LI99_RS21420 PF00491 Arginase family LI99_RS21435 PF13520 Amino acid permease LI99_RS21440 PF00072 Response regulator receiver domain LI99_RS21440 PF00196 Bacterial regulatory proteins, luxR family LI99_RS21450 PF06472 ABC transporter transmembrane region 2 LI99_RS21450 PF00005 ABC transporter LI99_RS21465 PF03176 MMPL family LI99_RS21470 PF00905 Penicillin binding protein transpeptidase domain LI99_RS21470 PF00912 Transglycosylase LI99_RS21475 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LI99_RS21480 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS21485 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS21485 PF12911 N-terminal TM domain of oligopeptide transport permease C LI99_RS21490 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LI99_RS21490 PF00005 ABC transporter LI99_RS21495 PF00296 Luciferase-like monooxygenase LI99_RS21500 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS21500 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS21500 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS21515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI99_RS21515 PF03466 LysR substrate binding domain LI99_RS21530 PF09278 MerR, DNA binding LI99_RS21530 PF00376 MerR family regulatory protein LI99_RS21535 PF00296 Luciferase-like monooxygenase LI99_RS21545 PF00107 Zinc-binding dehydrogenase LI99_RS21545 PF08240 Alcohol dehydrogenase GroES-like domain LI99_RS21550 PF13419 Haloacid dehalogenase-like hydrolase LI99_RS21570 PF04542 Sigma-70 region 2 LI99_RS21570 PF08281 Sigma-70, region 4 LI99_RS21595 PF00111 2Fe-2S iron-sulfur cluster binding domain LI99_RS21595 PF00175 Oxidoreductase NAD-binding domain LI99_RS21595 PF00970 Oxidoreductase FAD-binding domain LI99_RS21600 PF00174 Oxidoreductase molybdopterin binding domain LI99_RS21610 PF04239 Protein of unknown function (DUF421) LI99_RS21615 PF00923 Transaldolase/Fructose-6-phosphate aldolase LI99_RS21620 PF01625 Peptide methionine sulfoxide reductase LI99_RS21625 PF01641 SelR domain LI99_RS21645 PF07992 Pyridine nucleotide-disulphide oxidoreductase LI99_RS21645 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LI99_RS21665 PF07690 Major Facilitator Superfamily LI99_RS21685 PF00196 Bacterial regulatory proteins, luxR family LI99_RS21685 PF17874 MalT-like TPR region LI99_RS21690 PF00196 Bacterial regulatory proteins, luxR family LI99_RS21710 PF00456 Transketolase, thiamine diphosphate binding domain LI99_RS21710 PF02779 Transketolase, pyrimidine binding domain LI99_RS21710 PF02780 Transketolase, C-terminal domain LI99_RS21715 PF00115 Cytochrome C and Quinol oxidase polypeptide I LI99_RS21740 PF00109 Beta-ketoacyl synthase, N-terminal domain LI99_RS21740 PF08990 Erythronolide synthase docking LI99_RS21740 PF14765 Polyketide synthase dehydratase LI99_RS21740 PF00550 Phosphopantetheine attachment site LI99_RS21740 PF08240 Alcohol dehydrogenase GroES-like domain LI99_RS21740 PF02801 Beta-ketoacyl synthase, C-terminal domain LI99_RS21740 PF16197 Ketoacyl-synthetase C-terminal extension LI99_RS21740 PF09277 Erythronolide synthase, docking LI99_RS21740 PF00698 Acyl transferase domain LI99_RS21740 PF08659 KR domain LI99_RS21750 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LI99_RS21750 PF07992 Pyridine nucleotide-disulphide oxidoreductase LI99_RS21755 PF11455 Protein of unknown function (DUF3018) LI99_RS21760 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system LI99_RS21770 PF12146 Serine aminopeptidase, S33 LI99_RS21775 PF00743 Flavin-binding monooxygenase-like LI99_RS21790 PF01212 Beta-eliminating lyase LI99_RS21805 PF01037 Lrp/AsnC ligand binding domain LI99_RS21815 PF00491 Arginase family LI99_RS21820 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LI99_RS21820 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LI99_RS21820 PF00205 Thiamine pyrophosphate enzyme, central domain LI99_RS21825 PF00474 Sodium:solute symporter family LI99_RS21830 PF09529 Integral membrane protein (intg_mem_TP0381) LI99_RS21845 PF01083 Cutinase LI99_RS21850 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS21855 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS21860 PF01547 Bacterial extracellular solute-binding protein LI99_RS21865 PF02361 Cobalt transport protein LI99_RS21870 PF00005 ABC transporter LI99_RS21880 PF07690 Major Facilitator Superfamily LI99_RS21895 PF14041 LppP/LprE lipoprotein LI99_RS21925 PF08275 DNA primase catalytic core, N-terminal domain LI99_RS21925 PF01807 CHC2 zinc finger LI99_RS21925 PF08278 DNA primase DnaG DnaB-binding LI99_RS21925 PF13662 Toprim domain LI99_RS21925 PF10410 DnaB-helicase binding domain of primase LI99_RS21930 PF01966 HD domain LI99_RS21930 PF13286 Phosphohydrolase-associated domain LI99_RS21935 PF04536 TPM domain LI99_RS21940 PF03129 Anticodon binding domain LI99_RS21940 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LI99_RS21945 PF01022 Bacterial regulatory protein, arsR family LI99_RS21950 PF01475 Ferric uptake regulator family LI99_RS21955 PF00293 NUDIX domain LI99_RS21965 PF01255 Putative undecaprenyl diphosphate synthase LI99_RS21970 PF11967 Recombination protein O N terminal LI99_RS21970 PF02565 Recombination protein O C terminal LI99_RS21975 PF01425 Amidase LI99_RS21980 PF07650 KH domain LI99_RS21980 PF01926 50S ribosome-binding GTPase LI99_RS21990 PF03471 Transporter associated domain LI99_RS21990 PF01595 Cyclin M transmembrane N-terminal domain LI99_RS21990 PF00571 CBS domain LI99_RS21995 PF02130 Uncharacterized protein family UPF0054 LI99_RS22000 PF02562 PhoH-like protein LI99_RS22015 PF00375 Sodium:dicarboxylate symporter family LI99_RS22025 PF04452 RNA methyltransferase LI99_RS22030 PF00684 DnaJ central domain LI99_RS22030 PF00226 DnaJ domain LI99_RS22030 PF01556 DnaJ C terminal domain LI99_RS22035 PF01628 HrcA protein C terminal domain LI99_RS22050 PF03621 MbtH-like protein LI99_RS22055 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) LI99_RS22060 PF00550 Phosphopantetheine attachment site LI99_RS22060 PF00668 Condensation domain LI99_RS22060 PF00501 AMP-binding enzyme LI99_RS22060 PF13193 AMP-binding enzyme C-terminal domain LI99_RS22065 PF00501 AMP-binding enzyme LI99_RS22065 PF13193 AMP-binding enzyme C-terminal domain LI99_RS22065 PF00668 Condensation domain LI99_RS22065 PF00550 Phosphopantetheine attachment site LI99_RS22065 PF00975 Thioesterase domain LI99_RS22070 PF09277 Erythronolide synthase, docking LI99_RS22070 PF08240 Alcohol dehydrogenase GroES-like domain LI99_RS22070 PF16197 Ketoacyl-synthetase C-terminal extension LI99_RS22070 PF00698 Acyl transferase domain LI99_RS22070 PF00550 Phosphopantetheine attachment site LI99_RS22070 PF08659 KR domain LI99_RS22070 PF02801 Beta-ketoacyl synthase, C-terminal domain LI99_RS22070 PF00109 Beta-ketoacyl synthase, N-terminal domain LI99_RS22070 PF14765 Polyketide synthase dehydratase LI99_RS22070 PF08990 Erythronolide synthase docking LI99_RS22075 PF00109 Beta-ketoacyl synthase, N-terminal domain LI99_RS22075 PF00698 Acyl transferase domain LI99_RS22075 PF00550 Phosphopantetheine attachment site LI99_RS22075 PF02801 Beta-ketoacyl synthase, C-terminal domain LI99_RS22075 PF08990 Erythronolide synthase docking LI99_RS22075 PF16197 Ketoacyl-synthetase C-terminal extension LI99_RS22075 PF00975 Thioesterase domain LI99_RS22075 PF08659 KR domain LI99_RS22080 PF00501 AMP-binding enzyme LI99_RS22080 PF13193 AMP-binding enzyme C-terminal domain LI99_RS22080 PF00668 Condensation domain LI99_RS22080 PF00975 Thioesterase domain LI99_RS22080 PF00550 Phosphopantetheine attachment site LI99_RS22085 PF13193 AMP-binding enzyme C-terminal domain LI99_RS22085 PF00550 Phosphopantetheine attachment site LI99_RS22085 PF00501 AMP-binding enzyme LI99_RS22085 PF00668 Condensation domain LI99_RS22090 PF00501 AMP-binding enzyme LI99_RS22090 PF13193 AMP-binding enzyme C-terminal domain LI99_RS22110 PF12857 TOBE-like domain LI99_RS22110 PF00005 ABC transporter LI99_RS22120 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS22130 PF00425 chorismate binding enzyme LI99_RS22135 PF04055 Radical SAM superfamily LI99_RS22145 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LI99_RS22145 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LI99_RS22150 PF01507 Phosphoadenosine phosphosulfate reductase family LI99_RS22160 PF12857 TOBE-like domain LI99_RS22160 PF00005 ABC transporter LI99_RS22165 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS22170 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS22185 PF00723 Glycosyl hydrolases family 15 LI99_RS22200 PF00266 Aminotransferase class-V LI99_RS22205 PF00296 Luciferase-like monooxygenase LI99_RS22210 PF13530 Sterol carrier protein domain LI99_RS22210 PF17668 Acetyltransferase (GNAT) domain LI99_RS22215 PF00005 ABC transporter LI99_RS22215 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LI99_RS22220 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS22220 PF12911 N-terminal TM domain of oligopeptide transport permease C LI99_RS22225 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS22230 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LI99_RS22235 PF08468 Methyltransferase small domain N-terminal LI99_RS22235 PF05175 Methyltransferase small domain LI99_RS22240 PF08240 Alcohol dehydrogenase GroES-like domain LI99_RS22240 PF00107 Zinc-binding dehydrogenase LI99_RS22245 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS22260 PF01548 Transposase LI99_RS22260 PF02371 Transposase IS116/IS110/IS902 family LI99_RS22265 PF00296 Luciferase-like monooxygenase LI99_RS22270 PF00296 Luciferase-like monooxygenase LI99_RS22290 PF06421 GTP-binding protein LepA C-terminus LI99_RS22290 PF00009 Elongation factor Tu GTP binding domain LI99_RS22290 PF00679 Elongation factor G C-terminus LI99_RS22300 PF00005 ABC transporter LI99_RS22305 PF01032 FecCD transport family LI99_RS22325 PF00571 CBS domain LI99_RS22325 PF00478 IMP dehydrogenase / GMP reductase domain LI99_RS22330 PF00248 Aldo/keto reductase family LI99_RS22340 PF12706 Beta-lactamase superfamily domain LI99_RS22345 PF01841 Transglutaminase-like superfamily LI99_RS22345 PF08379 Bacterial transglutaminase-like N-terminal region LI99_RS22355 PF04174 A circularly permuted ATPgrasp LI99_RS22360 PF01649 Ribosomal protein S20 LI99_RS22375 PF10531 SLBB domain LI99_RS22385 PF01145 SPFH domain / Band 7 family LI99_RS22390 PF02645 Uncharacterised protein, DegV family COG1307 LI99_RS22400 PF00300 Histidine phosphatase superfamily (branch 1) LI99_RS22410 PF01467 Cytidylyltransferase-like LI99_RS22420 PF10431 C-terminal, D2-small domain, of ClpB protein LI99_RS22420 PF02861 Clp amino terminal domain, pathogenicity island component LI99_RS22420 PF07724 AAA domain (Cdc48 subfamily) LI99_RS22420 PF00004 ATPase family associated with various cellular activities (AAA) LI99_RS22420 PF17871 AAA lid domain LI99_RS22425 PF00171 Aldehyde dehydrogenase family LI99_RS22430 PF01467 Cytidylyltransferase-like LI99_RS22430 PF00294 pfkB family carbohydrate kinase LI99_RS22440 PF00005 ABC transporter LI99_RS22445 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS22455 PF00296 Luciferase-like monooxygenase LI99_RS22460 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS22460 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS22460 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS22525 PF03466 LysR substrate binding domain LI99_RS22525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI99_RS22550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI99_RS22550 PF13185 GAF domain LI99_RS22550 PF07730 Histidine kinase LI99_RS22550 PF13492 GAF domain LI99_RS22555 PF03796 DnaB-like helicase C terminal domain LI99_RS22565 PF02540 NAD synthase LI99_RS22565 PF00795 Carbon-nitrogen hydrolase LI99_RS22575 PF02146 Sir2 family LI99_RS22580 PF00067 Cytochrome P450 LI99_RS22590 PF01472 PUA domain LI99_RS22590 PF00696 Amino acid kinase family LI99_RS22595 PF01018 GTP1/OBG LI99_RS22595 PF01926 50S ribosome-binding GTPase LI99_RS22595 PF09269 Domain of unknown function (DUF1967) LI99_RS22600 PF01016 Ribosomal L27 protein LI99_RS22605 PF00829 Ribosomal prokaryotic L21 protein LI99_RS22610 PF10150 Ribonuclease E/G family LI99_RS22615 PF00334 Nucleoside diphosphate kinase LI99_RS22625 PF08245 Mur ligase middle domain LI99_RS22625 PF02875 Mur ligase family, glutamate ligase domain LI99_RS22640 PF03435 Saccharopine dehydrogenase NADP binding domain LI99_RS22645 PF00326 Prolyl oligopeptidase family LI99_RS22645 PF07676 WD40-like Beta Propeller Repeat LI99_RS22655 PF00909 Ammonium Transporter Family LI99_RS22670 PF00175 Oxidoreductase NAD-binding domain LI99_RS22670 PF00111 2Fe-2S iron-sulfur cluster binding domain LI99_RS22670 PF00970 Oxidoreductase FAD-binding domain LI99_RS22680 PF01494 FAD binding domain LI99_RS22685 PF06737 Transglycosylase-like domain LI99_RS22690 PF06737 Transglycosylase-like domain LI99_RS22695 PF12804 MobA-like NTP transferase domain LI99_RS22700 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LI99_RS22705 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase LI99_RS22705 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II LI99_RS22705 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg LI99_RS22710 PF00294 pfkB family carbohydrate kinase LI99_RS22715 PF00356 Bacterial regulatory proteins, lacI family LI99_RS22725 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LI99_RS22725 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LI99_RS22730 PF01261 Xylose isomerase-like TIM barrel LI99_RS22735 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LI99_RS22735 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LI99_RS22745 PF00248 Aldo/keto reductase family LI99_RS22750 PF12833 Helix-turn-helix domain LI99_RS22750 PF06719 AraC-type transcriptional regulator N-terminus LI99_RS22755 PF00005 ABC transporter LI99_RS22760 PF02653 Branched-chain amino acid transport system / permease component LI99_RS22770 PF00392 Bacterial regulatory proteins, gntR family LI99_RS22770 PF07702 UTRA domain LI99_RS22775 PF00294 pfkB family carbohydrate kinase LI99_RS22785 PF04962 KduI/IolB family LI99_RS22790 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LI99_RS22790 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LI99_RS22790 PF00205 Thiamine pyrophosphate enzyme, central domain LI99_RS22800 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LI99_RS22800 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LI99_RS22805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI99_RS22805 PF03466 LysR substrate binding domain LI99_RS22810 PF01568 Molydopterin dinucleotide binding domain LI99_RS22810 PF00384 Molybdopterin oxidoreductase LI99_RS22815 PF02634 FdhD/NarQ family LI99_RS22820 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase LI99_RS22825 PF10431 C-terminal, D2-small domain, of ClpB protein LI99_RS22825 PF07724 AAA domain (Cdc48 subfamily) LI99_RS22825 PF06689 ClpX C4-type zinc finger LI99_RS22830 PF00574 Clp protease LI99_RS22835 PF00574 Clp protease LI99_RS22840 PF05698 Bacterial trigger factor protein (TF) C-terminus LI99_RS22840 PF05697 Bacterial trigger factor protein (TF) LI99_RS22840 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LI99_RS22875 PF00999 Sodium/hydrogen exchanger family LI99_RS22880 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LI99_RS22880 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LI99_RS22880 PF06827 Zinc finger found in FPG and IleRS LI99_RS22885 PF02502 Ribose/Galactose Isomerase LI99_RS22890 PF00248 Aldo/keto reductase family LI99_RS22895 PF14226 non-haem dioxygenase in morphine synthesis N-terminal LI99_RS22895 PF03171 2OG-Fe(II) oxygenase superfamily LI99_RS22905 PF01323 DSBA-like thioredoxin domain LI99_RS22915 PF01433 Peptidase family M1 domain LI99_RS22915 PF11838 ERAP1-like C-terminal domain LI99_RS22925 PF17174 Domain of unknown function (DUF5130) LI99_RS22940 PF01152 Bacterial-like globin LI99_RS22945 PF00128 Alpha amylase, catalytic domain LI99_RS22960 PF05088 Bacterial NAD-glutamate dehydrogenase LI99_RS22965 PF00005 ABC transporter LI99_RS22965 PF12848 ABC transporter LI99_RS22975 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) LI99_RS22975 PF05425 Copper resistance protein D LI99_RS22980 PF01553 Acyltransferase LI99_RS22990 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain LI99_RS22990 PF06974 Protein of unknown function (DUF1298) LI99_RS23000 PF00561 alpha/beta hydrolase fold LI99_RS23005 PF08241 Methyltransferase domain LI99_RS23010 PF00378 Enoyl-CoA hydratase/isomerase LI99_RS23015 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LI99_RS23015 PF00364 Biotin-requiring enzyme LI99_RS23015 PF02817 e3 binding domain LI99_RS23020 PF02779 Transketolase, pyrimidine binding domain LI99_RS23020 PF02780 Transketolase, C-terminal domain LI99_RS23025 PF00676 Dehydrogenase E1 component LI99_RS23030 PF03328 HpcH/HpaI aldolase/citrate lyase family LI99_RS23040 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS23040 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS23040 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS23045 PF00364 Biotin-requiring enzyme LI99_RS23045 PF00289 Biotin carboxylase, N-terminal domain LI99_RS23045 PF02785 Biotin carboxylase C-terminal domain LI99_RS23045 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LI99_RS23050 PF01039 Carboxyl transferase domain LI99_RS23075 PF00106 short chain dehydrogenase LI99_RS23080 PF05872 Bacterial protein of unknown function (DUF853) LI99_RS23085 PF00929 Exonuclease LI99_RS23100 PF00698 Acyl transferase domain LI99_RS23100 PF16197 Ketoacyl-synthetase C-terminal extension LI99_RS23100 PF00107 Zinc-binding dehydrogenase LI99_RS23100 PF08240 Alcohol dehydrogenase GroES-like domain LI99_RS23100 PF02801 Beta-ketoacyl synthase, C-terminal domain LI99_RS23100 PF00109 Beta-ketoacyl synthase, N-terminal domain LI99_RS23100 PF08659 KR domain LI99_RS23100 PF00550 Phosphopantetheine attachment site LI99_RS23100 PF14765 Polyketide synthase dehydratase LI99_RS23105 PF00668 Condensation domain LI99_RS23120 PF00501 AMP-binding enzyme LI99_RS23125 PF01551 Peptidase family M23 LI99_RS23135 PF08237 PE-PPE domain LI99_RS23135 PF00823 PPE family LI99_RS23160 PF04989 Cephalosporin hydroxylase LI99_RS23165 PF03033 Glycosyltransferase family 28 N-terminal domain LI99_RS23170 PF03176 MMPL family LI99_RS23175 PF00106 short chain dehydrogenase LI99_RS23190 PF03734 L,D-transpeptidase catalytic domain LI99_RS23190 PF17964 Bacterial Ig domain LI99_RS23230 PF00578 AhpC/TSA family LI99_RS23235 PF01699 Sodium/calcium exchanger protein LI99_RS23240 PF07687 Peptidase dimerisation domain LI99_RS23240 PF01546 Peptidase family M20/M25/M40 LI99_RS23245 PF01648 4'-phosphopantetheinyl transferase superfamily LI99_RS23250 PF02801 Beta-ketoacyl synthase, C-terminal domain LI99_RS23250 PF00109 Beta-ketoacyl synthase, N-terminal domain LI99_RS23265 PF00005 ABC transporter LI99_RS23265 PF08402 TOBE domain LI99_RS23270 PF13416 Bacterial extracellular solute-binding protein LI99_RS23275 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS23280 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS23320 PF00501 AMP-binding enzyme LI99_RS23320 PF13193 AMP-binding enzyme C-terminal domain LI99_RS23330 PF13193 AMP-binding enzyme C-terminal domain LI99_RS23330 PF00501 AMP-binding enzyme LI99_RS23335 PF00378 Enoyl-CoA hydratase/isomerase LI99_RS23350 PF00108 Thiolase, N-terminal domain LI99_RS23350 PF02803 Thiolase, C-terminal domain LI99_RS23360 PF00067 Cytochrome P450 LI99_RS23390 PF02470 MlaD protein LI99_RS23430 PF02405 Permease MlaE LI99_RS23435 PF02405 Permease MlaE LI99_RS23445 PF02515 CoA-transferase family III LI99_RS23450 PF00171 Aldehyde dehydrogenase family LI99_RS23455 PF00106 short chain dehydrogenase LI99_RS23460 PF00106 short chain dehydrogenase LI99_RS23470 PF00067 Cytochrome P450 LI99_RS23480 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS23480 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS23480 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS23485 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS23485 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS23485 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS23515 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LI99_RS23515 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LI99_RS23515 PF10531 SLBB domain LI99_RS23535 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LI99_RS23535 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LI99_RS23540 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LI99_RS23540 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LI99_RS23545 PF00067 Cytochrome P450 LI99_RS23570 PF00067 Cytochrome P450 LI99_RS23580 PF00440 Bacterial regulatory proteins, tetR family LI99_RS23585 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS23585 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS23585 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS23595 PF08240 Alcohol dehydrogenase GroES-like domain LI99_RS23595 PF00107 Zinc-binding dehydrogenase LI99_RS23600 PF00067 Cytochrome P450 LI99_RS23610 PF08359 YsiA-like protein, C-terminal region LI99_RS23610 PF00440 Bacterial regulatory proteins, tetR family LI99_RS23615 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS23615 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS23615 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS23620 PF02803 Thiolase, C-terminal domain LI99_RS23620 PF00108 Thiolase, N-terminal domain LI99_RS23625 PF02515 CoA-transferase family III LI99_RS23635 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS23635 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS23635 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS23655 PF00355 Rieske [2Fe-2S] domain LI99_RS23655 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LI99_RS23665 PF13382 Adenine deaminase C-terminal domain LI99_RS23665 PF01979 Amidohydrolase family LI99_RS23675 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS23675 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS23675 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS23685 PF00378 Enoyl-CoA hydratase/isomerase LI99_RS23705 PF02515 CoA-transferase family III LI99_RS23710 PF00378 Enoyl-CoA hydratase/isomerase LI99_RS23715 PF01321 Creatinase/Prolidase N-terminal domain LI99_RS23715 PF00557 Metallopeptidase family M24 LI99_RS23720 PF00557 Metallopeptidase family M24 LI99_RS23730 PF00067 Cytochrome P450 LI99_RS23750 PF12697 Alpha/beta hydrolase family LI99_RS23765 PF00296 Luciferase-like monooxygenase LI99_RS23770 PF00890 FAD binding domain LI99_RS23775 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LI99_RS23780 PF01494 FAD binding domain LI99_RS23785 PF00561 alpha/beta hydrolase fold LI99_RS23795 PF00890 FAD binding domain LI99_RS23805 PF00106 short chain dehydrogenase LI99_RS23815 PF00378 Enoyl-CoA hydratase/isomerase LI99_RS23820 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS23820 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS23820 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS23825 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS23825 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS23825 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS23830 PF00501 AMP-binding enzyme LI99_RS23830 PF13193 AMP-binding enzyme C-terminal domain LI99_RS23835 PF00175 Oxidoreductase NAD-binding domain LI99_RS23835 PF00111 2Fe-2S iron-sulfur cluster binding domain LI99_RS23835 PF00970 Oxidoreductase FAD-binding domain LI99_RS23840 PF02515 CoA-transferase family III LI99_RS23845 PF00296 Luciferase-like monooxygenase LI99_RS23850 PF02310 B12 binding domain LI99_RS23855 PF01642 Methylmalonyl-CoA mutase LI99_RS23855 PF02310 B12 binding domain LI99_RS23865 PF00501 AMP-binding enzyme LI99_RS23865 PF13193 AMP-binding enzyme C-terminal domain LI99_RS23875 PF07690 Major Facilitator Superfamily LI99_RS23875 PF00083 Sugar (and other) transporter LI99_RS23885 PF00067 Cytochrome P450 LI99_RS23890 PF00356 Bacterial regulatory proteins, lacI family LI99_RS23895 PF00083 Sugar (and other) transporter LI99_RS23895 PF08946 Osmosensory transporter coiled coil LI99_RS23900 PF02627 Carboxymuconolactone decarboxylase family LI99_RS23905 PF00578 AhpC/TSA family LI99_RS23925 PF00501 AMP-binding enzyme LI99_RS23940 PF12823 Domain of unknown function (DUF3817) LI99_RS23945 PF01725 Ham1 family LI99_RS23950 PF01138 3' exoribonuclease family, domain 1 LI99_RS23950 PF03725 3' exoribonuclease family, domain 2 LI99_RS23955 PF12706 Beta-lactamase superfamily domain LI99_RS23960 PF01177 Asp/Glu/Hydantoin racemase LI99_RS23965 PF01694 Rhomboid family LI99_RS23970 PF00291 Pyridoxal-phosphate dependent enzyme LI99_RS23975 PF02597 ThiS family LI99_RS23980 PF14464 Prokaryotic homologs of the JAB domain LI99_RS23985 PF03576 Peptidase family S58 LI99_RS23990 PF09438 Domain of unknown function (DUF2017) LI99_RS23995 PF02617 ATP-dependent Clp protease adaptor protein ClpS LI99_RS24000 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LI99_RS24000 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LI99_RS24005 PF13307 Helicase C-terminal domain LI99_RS24020 PF11897 Protein of unknown function (DUF3417) LI99_RS24020 PF00343 Carbohydrate phosphorylase LI99_RS24025 PF00128 Alpha amylase, catalytic domain LI99_RS24025 PF11896 Domain of unknown function (DUF3416) LI99_RS24030 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LI99_RS24030 PF02806 Alpha amylase, C-terminal all-beta domain LI99_RS24030 PF00128 Alpha amylase, catalytic domain LI99_RS24035 PF00085 Thioredoxin LI99_RS24040 PF03176 MMPL family LI99_RS24040 PF12823 Domain of unknown function (DUF3817) LI99_RS24045 PF02803 Thiolase, C-terminal domain LI99_RS24045 PF00108 Thiolase, N-terminal domain LI99_RS24060 PF01939 Endonuclease NucS LI99_RS24065 PF00211 Adenylate and Guanylate cyclase catalytic domain LI99_RS24065 PF00672 HAMP domain LI99_RS24070 PF12833 Helix-turn-helix domain LI99_RS24070 PF00730 HhH-GPD superfamily base excision DNA repair protein LI99_RS24070 PF06029 AlkA N-terminal domain LI99_RS24070 PF02805 Metal binding domain of Ada LI99_RS24085 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LI99_RS24085 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LI99_RS24105 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LI99_RS24110 PF01923 Cobalamin adenosyltransferase LI99_RS24115 PF10739 Protein of unknown function (DUF2550) LI99_RS24120 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LI99_RS24125 PF02874 ATP synthase alpha/beta family, beta-barrel domain LI99_RS24125 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LI99_RS24130 PF00231 ATP synthase LI99_RS24135 PF00306 ATP synthase alpha/beta chain, C terminal domain LI99_RS24135 PF02874 ATP synthase alpha/beta family, beta-barrel domain LI99_RS24135 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LI99_RS24140 PF00213 ATP synthase delta (OSCP) subunit LI99_RS24140 PF00430 ATP synthase B/B' CF(0) LI99_RS24145 PF00430 ATP synthase B/B' CF(0) LI99_RS24150 PF00137 ATP synthase subunit C LI99_RS24155 PF00119 ATP synthase A chain LI99_RS24160 PF03899 ATP synthase I chain LI99_RS24175 PF00953 Glycosyl transferase family 4 LI99_RS24180 PF01300 Telomere recombination LI99_RS24185 PF05175 Methyltransferase small domain LI99_RS24185 PF17827 PrmC N-terminal domain LI99_RS24190 PF00472 RF-1 domain LI99_RS24190 PF03462 PCRF domain LI99_RS24195 PF01197 Ribosomal protein L31 LI99_RS24200 PF13193 AMP-binding enzyme C-terminal domain LI99_RS24200 PF00501 AMP-binding enzyme LI99_RS24205 PF00440 Bacterial regulatory proteins, tetR family LI99_RS24205 PF17932 Tetracyclin repressor-like, C-terminal domain LI99_RS24210 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LI99_RS24210 PF07497 Rho termination factor, RNA-binding domain LI99_RS24210 PF07498 Rho termination factor, N-terminal domain LI99_RS24215 PF00288 GHMP kinases N terminal domain LI99_RS24215 PF08544 GHMP kinases C terminal LI99_RS24220 PF00291 Pyridoxal-phosphate dependent enzyme LI99_RS24225 PF01842 ACT domain LI99_RS24225 PF03447 Homoserine dehydrogenase, NAD binding domain LI99_RS24225 PF00742 Homoserine dehydrogenase LI99_RS24230 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LI99_RS24230 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LI99_RS24235 PF00750 tRNA synthetases class I (R) LI99_RS24235 PF05746 DALR anticodon binding domain LI99_RS24235 PF03485 Arginyl tRNA synthetase N terminal domain LI99_RS24260 PF01494 FAD binding domain LI99_RS24280 PF00296 Luciferase-like monooxygenase LI99_RS24285 PF07730 Histidine kinase LI99_RS24290 PF00072 Response regulator receiver domain LI99_RS24290 PF00196 Bacterial regulatory proteins, luxR family LI99_RS24300 PF03060 Nitronate monooxygenase LI99_RS24315 PF02082 Transcriptional regulator LI99_RS24330 PF00459 Inositol monophosphatase family LI99_RS24335 PF00009 Elongation factor Tu GTP binding domain LI99_RS24340 PF01507 Phosphoadenosine phosphosulfate reductase family LI99_RS24345 PF07690 Major Facilitator Superfamily LI99_RS24370 PF00484 Carbonic anhydrase LI99_RS24375 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase LI99_RS24385 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase LI99_RS24390 PF00672 HAMP domain LI99_RS24390 PF00512 His Kinase A (phospho-acceptor) domain LI99_RS24390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI99_RS24395 PF00486 Transcriptional regulatory protein, C terminal LI99_RS24395 PF00072 Response regulator receiver domain LI99_RS24420 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS24425 PF12911 N-terminal TM domain of oligopeptide transport permease C LI99_RS24425 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS24430 PF00005 ABC transporter LI99_RS24430 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LI99_RS24435 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LI99_RS24445 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS24445 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS24450 PF03466 LysR substrate binding domain LI99_RS24450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI99_RS24460 PF13175 AAA ATPase domain LI99_RS24470 PF00300 Histidine phosphatase superfamily (branch 1) LI99_RS24480 PF12079 Protein of unknown function (DUF3558) LI99_RS24485 PF00664 ABC transporter transmembrane region LI99_RS24485 PF00005 ABC transporter LI99_RS24490 PF00005 ABC transporter LI99_RS24490 PF00664 ABC transporter transmembrane region LI99_RS24510 PF00403 Heavy-metal-associated domain LI99_RS24520 PF00403 Heavy-metal-associated domain LI99_RS24530 PF16701 Adenylate cyclase regulatory domain LI99_RS24530 PF00211 Adenylate and Guanylate cyclase catalytic domain LI99_RS24540 PF00106 short chain dehydrogenase LI99_RS24545 PF00107 Zinc-binding dehydrogenase LI99_RS24545 PF08240 Alcohol dehydrogenase GroES-like domain LI99_RS24550 PF00743 Flavin-binding monooxygenase-like LI99_RS24565 PF02720 Domain of unknown function (DUF222) LI99_RS24580 PF01230 HIT domain LI99_RS24585 PF04075 F420H(2)-dependent quinone reductase LI99_RS24590 PF00296 Luciferase-like monooxygenase LI99_RS24595 PF03167 Uracil DNA glycosylase superfamily LI99_RS24600 PF07690 Major Facilitator Superfamily LI99_RS24605 PF01638 HxlR-like helix-turn-helix LI99_RS24620 PF01565 FAD binding domain LI99_RS24620 PF02913 FAD linked oxidases, C-terminal domain LI99_RS24630 PF00067 Cytochrome P450 LI99_RS24635 PF00440 Bacterial regulatory proteins, tetR family LI99_RS24640 PF04954 Siderophore-interacting protein LI99_RS24640 PF00664 ABC transporter transmembrane region LI99_RS24640 PF08021 Siderophore-interacting FAD-binding domain LI99_RS24640 PF00005 ABC transporter LI99_RS24650 PF00271 Helicase conserved C-terminal domain LI99_RS24650 PF00270 DEAD/DEAH box helicase LI99_RS24650 PF03880 DbpA RNA binding domain LI99_RS24655 PF14041 LppP/LprE lipoprotein LI99_RS24665 PF02913 FAD linked oxidases, C-terminal domain LI99_RS24665 PF01565 FAD binding domain LI99_RS24670 PF07690 Major Facilitator Superfamily LI99_RS24675 PF07690 Major Facilitator Superfamily LI99_RS24685 PF16870 2-oxoglutarate dehydrogenase C-terminal LI99_RS24685 PF00676 Dehydrogenase E1 component LI99_RS24685 PF02779 Transketolase, pyrimidine binding domain LI99_RS24685 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LI99_RS24685 PF16078 2-oxoglutarate dehydrogenase N-terminus LI99_RS24690 PF00083 Sugar (and other) transporter LI99_RS24695 PF00557 Metallopeptidase family M24 LI99_RS24705 PF00106 short chain dehydrogenase LI99_RS24715 PF03949 Malic enzyme, NAD binding domain LI99_RS24715 PF00390 Malic enzyme, N-terminal domain LI99_RS24720 PF01544 CorA-like Mg2+ transporter protein LI99_RS24730 PF17912 MalK OB fold domain LI99_RS24730 PF00005 ABC transporter LI99_RS24735 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS24740 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS24745 PF01547 Bacterial extracellular solute-binding protein LI99_RS24760 PF03328 HpcH/HpaI aldolase/citrate lyase family LI99_RS24765 PF01769 Divalent cation transporter LI99_RS24765 PF00571 CBS domain LI99_RS24765 PF03448 MgtE intracellular N domain LI99_RS24780 PF01883 Iron-sulfur cluster assembly protein LI99_RS24780 PF10609 NUBPL iron-transfer P-loop NTPase LI99_RS24790 PF13180 PDZ domain LI99_RS24800 PF04542 Sigma-70 region 2 LI99_RS24800 PF08281 Sigma-70, region 4 LI99_RS24805 PF01596 O-methyltransferase LI99_RS24810 PF17933 Tetracyclin repressor-like, C-terminal domain LI99_RS24810 PF00440 Bacterial regulatory proteins, tetR family LI99_RS24815 PF00005 ABC transporter LI99_RS24815 PF13732 Domain of unknown function (DUF4162) LI99_RS24835 PF00483 Nucleotidyl transferase LI99_RS24840 PF00534 Glycosyl transferases group 1 LI99_RS24840 PF13439 Glycosyltransferase Family 4 LI99_RS24850 PF13302 Acetyltransferase (GNAT) domain LI99_RS24850 PF13673 Acetyltransferase (GNAT) domain LI99_RS24850 PF00117 Glutamine amidotransferase class-I LI99_RS24850 PF00958 GMP synthase C terminal domain LI99_RS24850 PF03352 Methyladenine glycosylase LI99_RS24860 PF00535 Glycosyl transferase family 2 LI99_RS24865 PF00809 Pterin binding enzyme LI99_RS24870 PF00501 AMP-binding enzyme LI99_RS24870 PF13193 AMP-binding enzyme C-terminal domain LI99_RS24875 PF03641 Possible lysine decarboxylase LI99_RS24880 PF02190 ATP-dependent protease La (LON) substrate-binding domain LI99_RS24880 PF05362 Lon protease (S16) C-terminal proteolytic domain LI99_RS24880 PF00004 ATPase family associated with various cellular activities (AAA) LI99_RS24940 PF00005 ABC transporter LI99_RS24945 PF01546 Peptidase family M20/M25/M40 LI99_RS24945 PF07687 Peptidase dimerisation domain LI99_RS24950 PF14602 Hexapeptide repeat of succinyl-transferase LI99_RS24950 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle LI99_RS24960 PF02720 Domain of unknown function (DUF222) LI99_RS24975 PF12706 Beta-lactamase superfamily domain LI99_RS25000 PF13193 AMP-binding enzyme C-terminal domain LI99_RS25000 PF00501 AMP-binding enzyme LI99_RS25015 PF01619 Proline dehydrogenase LI99_RS25020 PF00171 Aldehyde dehydrogenase family LI99_RS25025 PF17853 GGDEF-like domain LI99_RS25025 PF13556 PucR C-terminal helix-turn-helix domain LI99_RS25030 PF00155 Aminotransferase class I and II LI99_RS25035 PF00037 4Fe-4S binding domain LI99_RS25055 PF07992 Pyridine nucleotide-disulphide oxidoreductase LI99_RS25055 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LI99_RS25060 PF04264 YceI-like domain LI99_RS25065 PF04055 Radical SAM superfamily LI99_RS25080 PF02585 GlcNAc-PI de-N-acetylase LI99_RS25085 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LI99_RS25095 PF00679 Elongation factor G C-terminus LI99_RS25095 PF14492 Elongation Factor G, domain II LI99_RS25095 PF00009 Elongation factor Tu GTP binding domain LI99_RS25095 PF03144 Elongation factor Tu domain 2 LI99_RS25115 PF12900 Pyridoxamine 5'-phosphate oxidase LI99_RS25120 PF02613 Nitrate reductase delta subunit LI99_RS25120 PF00384 Molybdopterin oxidoreductase LI99_RS25120 PF02665 Nitrate reductase gamma subunit LI99_RS25125 PF00384 Molybdopterin oxidoreductase LI99_RS25125 PF02613 Nitrate reductase delta subunit LI99_RS25125 PF02665 Nitrate reductase gamma subunit LI99_RS25130 PF13247 4Fe-4S dicluster domain LI99_RS25130 PF14711 Respiratory nitrate reductase beta C-terminal LI99_RS25135 PF00384 Molybdopterin oxidoreductase LI99_RS25135 PF01568 Molydopterin dinucleotide binding domain LI99_RS25140 PF07690 Major Facilitator Superfamily LI99_RS25145 PF00232 Glycosyl hydrolase family 1 LI99_RS25150 PF00356 Bacterial regulatory proteins, lacI family LI99_RS25155 PF14310 Fibronectin type III-like domain LI99_RS25155 PF01915 Glycosyl hydrolase family 3 C-terminal domain LI99_RS25155 PF00933 Glycosyl hydrolase family 3 N terminal domain LI99_RS25165 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS25175 PF00293 NUDIX domain LI99_RS25180 PF01329 Pterin 4 alpha carbinolamine dehydratase LI99_RS25185 PF09594 Glycosyltransferase family 87 LI99_RS25205 PF00881 Nitroreductase family LI99_RS25220 PF06580 Histidine kinase LI99_RS25220 PF07694 5TMR of 5TMR-LYT LI99_RS25225 PF04397 LytTr DNA-binding domain LI99_RS25225 PF00072 Response regulator receiver domain LI99_RS25235 PF00474 Sodium:solute symporter family LI99_RS25240 PF01638 HxlR-like helix-turn-helix LI99_RS25250 PF00107 Zinc-binding dehydrogenase LI99_RS25250 PF08240 Alcohol dehydrogenase GroES-like domain LI99_RS25260 PF00474 Sodium:solute symporter family LI99_RS25265 PF07690 Major Facilitator Superfamily LI99_RS25280 PF01243 Pyridoxamine 5'-phosphate oxidase LI99_RS25305 PF02146 Sir2 family LI99_RS25320 PF03176 MMPL family LI99_RS25340 PF03060 Nitronate monooxygenase LI99_RS25345 PF00106 short chain dehydrogenase LI99_RS25350 PF02515 CoA-transferase family III LI99_RS25355 PF00378 Enoyl-CoA hydratase/isomerase LI99_RS25375 PF11066 Protein of unknown function (DUF2867) LI99_RS25375 PF13460 NAD(P)H-binding LI99_RS25385 PF00248 Aldo/keto reductase family LI99_RS25390 PF00132 Bacterial transferase hexapeptide (six repeats) LI99_RS25395 PF01965 DJ-1/PfpI family LI99_RS25395 PF12833 Helix-turn-helix domain LI99_RS25410 PF02469 Fasciclin domain LI99_RS25415 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS25415 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS25415 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS25420 PF00378 Enoyl-CoA hydratase/isomerase LI99_RS25425 PF00108 Thiolase, N-terminal domain LI99_RS25425 PF02803 Thiolase, C-terminal domain LI99_RS25430 PF00392 Bacterial regulatory proteins, gntR family LI99_RS25430 PF07729 FCD domain LI99_RS25450 PF00106 short chain dehydrogenase LI99_RS25455 PF00440 Bacterial regulatory proteins, tetR family LI99_RS25480 PF00202 Aminotransferase class-III LI99_RS25500 PF04545 Sigma-70, region 4 LI99_RS25500 PF04542 Sigma-70 region 2 LI99_RS25530 PF07859 alpha/beta hydrolase fold LI99_RS25540 PF01926 50S ribosome-binding GTPase LI99_RS25540 PF06071 Protein of unknown function (DUF933) LI99_RS25550 PF02401 LytB protein LI99_RS25560 PF02601 Exonuclease VII, large subunit LI99_RS25560 PF13742 OB-fold nucleic acid binding domain LI99_RS25565 PF02609 Exonuclease VII small subunit LI99_RS25570 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family LI99_RS25605 PF01594 AI-2E family transporter LI99_RS25620 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded LI99_RS25625 PF10415 Fumarase C C-terminus LI99_RS25625 PF00206 Lyase LI99_RS25630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI99_RS25630 PF13185 GAF domain LI99_RS25630 PF07730 Histidine kinase LI99_RS25630 PF13492 GAF domain LI99_RS25635 PF06974 Protein of unknown function (DUF1298) LI99_RS25635 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain LI99_RS25640 PF12900 Pyridoxamine 5'-phosphate oxidase LI99_RS25645 PF00072 Response regulator receiver domain LI99_RS25645 PF00196 Bacterial regulatory proteins, luxR family LI99_RS25650 PF00582 Universal stress protein family LI99_RS25665 PF03405 Fatty acid desaturase LI99_RS25670 PF00464 Serine hydroxymethyltransferase LI99_RS25680 PF00485 Phosphoribulokinase / Uridine kinase family LI99_RS25705 PF01255 Putative undecaprenyl diphosphate synthase LI99_RS25710 PF03006 Haemolysin-III related LI99_RS25715 PF12680 SnoaL-like domain LI99_RS25720 PF03190 Protein of unknown function, DUF255 LI99_RS25730 PF02585 GlcNAc-PI de-N-acetylase LI99_RS25740 PF01272 Transcription elongation factor, GreA/GreB, C-term LI99_RS25740 PF03449 Transcription elongation factor, N-terminal LI99_RS25750 PF01053 Cys/Met metabolism PLP-dependent enzyme LI99_RS25755 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS25755 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS25755 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS25760 PF06271 RDD family LI99_RS25770 PF00291 Pyridoxal-phosphate dependent enzyme LI99_RS25770 PF00571 CBS domain LI99_RS25775 PF07859 alpha/beta hydrolase fold LI99_RS25780 PF13472 GDSL-like Lipase/Acylhydrolase family LI99_RS25785 PF00108 Thiolase, N-terminal domain LI99_RS25785 PF02803 Thiolase, C-terminal domain LI99_RS25790 PF02222 ATP-grasp domain LI99_RS25800 PF00378 Enoyl-CoA hydratase/isomerase LI99_RS25805 PF00378 Enoyl-CoA hydratase/isomerase LI99_RS25825 PF17301 Putative lipoprotein LpqV LI99_RS25830 PF13977 BetI-type transcriptional repressor, C-terminal LI99_RS25830 PF00440 Bacterial regulatory proteins, tetR family LI99_RS25835 PF02129 X-Pro dipeptidyl-peptidase (S15 family) LI99_RS25835 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain LI99_RS25840 PF01734 Patatin-like phospholipase LI99_RS25850 PF08240 Alcohol dehydrogenase GroES-like domain LI99_RS25850 PF00107 Zinc-binding dehydrogenase LI99_RS25870 PF00501 AMP-binding enzyme LI99_RS25870 PF13193 AMP-binding enzyme C-terminal domain LI99_RS25885 PF13193 AMP-binding enzyme C-terminal domain LI99_RS25885 PF00501 AMP-binding enzyme LI99_RS25895 PF00205 Thiamine pyrophosphate enzyme, central domain LI99_RS25895 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LI99_RS25895 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LI99_RS25920 PF00375 Sodium:dicarboxylate symporter family LI99_RS25925 PF00474 Sodium:solute symporter family LI99_RS25930 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LI99_RS25930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI99_RS25930 PF17203 Single cache domain 3 LI99_RS25930 PF00989 PAS fold LI99_RS25935 PF00072 Response regulator receiver domain LI99_RS25935 PF08279 HTH domain LI99_RS25940 PF05199 GMC oxidoreductase LI99_RS25940 PF00732 GMC oxidoreductase LI99_RS25945 PF00440 Bacterial regulatory proteins, tetR family LI99_RS25960 PF13847 Methyltransferase domain LI99_RS25970 PF00005 ABC transporter LI99_RS25995 PF00005 ABC transporter LI99_RS26000 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS26005 PF02627 Carboxymuconolactone decarboxylase family LI99_RS26045 PF01169 Uncharacterized protein family UPF0016 LI99_RS26060 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase LI99_RS26060 PF04101 Glycosyltransferase family 28 C-terminal domain LI99_RS26080 PF03069 Acetamidase/Formamidase family LI99_RS26085 PF02293 AmiS/UreI family transporter LI99_RS26100 PF00440 Bacterial regulatory proteins, tetR family LI99_RS26130 PF08361 MAATS-type transcriptional repressor, C-terminal region LI99_RS26130 PF00440 Bacterial regulatory proteins, tetR family LI99_RS26135 PF07690 Major Facilitator Superfamily LI99_RS26140 PF13193 AMP-binding enzyme C-terminal domain LI99_RS26140 PF00501 AMP-binding enzyme LI99_RS26150 PF08237 PE-PPE domain LI99_RS26150 PF00823 PPE family LI99_RS26165 PF01209 ubiE/COQ5 methyltransferase family LI99_RS26170 PF00891 O-methyltransferase domain LI99_RS26190 PF03069 Acetamidase/Formamidase family LI99_RS26195 PF02560 Cyanate lyase C-terminal domain LI99_RS26225 PF05368 NmrA-like family LI99_RS26240 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS26245 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS26250 PF00005 ABC transporter LI99_RS26255 PF02702 Osmosensitive K+ channel His kinase sensor domain LI99_RS26255 PF00512 His Kinase A (phospho-acceptor) domain LI99_RS26255 PF00582 Universal stress protein family LI99_RS26255 PF13493 Domain of unknown function (DUF4118) LI99_RS26255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI99_RS26260 PF00795 Carbon-nitrogen hydrolase LI99_RS26265 PF00120 Glutamine synthetase, catalytic domain LI99_RS26270 PF07729 FCD domain LI99_RS26270 PF00392 Bacterial regulatory proteins, gntR family LI99_RS26310 PF00581 Rhodanese-like domain LI99_RS26315 PF00581 Rhodanese-like domain LI99_RS26315 PF11127 Protein of unknown function (DUF2892) LI99_RS26320 PF01925 Sulfite exporter TauE/SafE LI99_RS26325 PF02583 Metal-sensitive transcriptional repressor LI99_RS26345 PF03814 Potassium-transporting ATPase A subunit LI99_RS26355 PF02669 K+-transporting ATPase, c chain LI99_RS26360 PF00512 His Kinase A (phospho-acceptor) domain LI99_RS26360 PF13493 Domain of unknown function (DUF4118) LI99_RS26360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI99_RS26360 PF02702 Osmosensitive K+ channel His kinase sensor domain LI99_RS26360 PF00582 Universal stress protein family LI99_RS26365 PF00072 Response regulator receiver domain LI99_RS26365 PF00486 Transcriptional regulatory protein, C terminal LI99_RS26370 PF09382 RQC domain LI99_RS26370 PF00271 Helicase conserved C-terminal domain LI99_RS26370 PF00570 HRDC domain LI99_RS26370 PF00270 DEAD/DEAH box helicase LI99_RS26370 PF16124 RecQ zinc-binding LI99_RS26380 PF00270 DEAD/DEAH box helicase LI99_RS26380 PF09382 RQC domain LI99_RS26380 PF16124 RecQ zinc-binding LI99_RS26380 PF00570 HRDC domain LI99_RS26380 PF00271 Helicase conserved C-terminal domain LI99_RS26395 PF00106 short chain dehydrogenase LI99_RS26400 PF13193 AMP-binding enzyme C-terminal domain LI99_RS26400 PF00501 AMP-binding enzyme LI99_RS26400 PF16177 Acetyl-coenzyme A synthetase N-terminus LI99_RS26410 PF01022 Bacterial regulatory protein, arsR family LI99_RS26425 PF01790 Prolipoprotein diacylglyceryl transferase LI99_RS26445 PF09167 Domain of unknown function (DUF1942) LI99_RS26450 PF02541 Ppx/GppA phosphatase family LI99_RS26465 PF00113 Enolase, C-terminal TIM barrel domain LI99_RS26465 PF03952 Enolase, N-terminal domain LI99_RS26475 PF03239 Iron permease FTR1 family LI99_RS26480 PF13473 Cupredoxin-like domain LI99_RS26480 PF09375 Imelysin LI99_RS26485 PF04261 Dyp-type peroxidase family LI99_RS26485 PF10518 TAT (twin-arginine translocation) pathway signal sequence LI99_RS26495 PF03819 MazG nucleotide pyrophosphohydrolase domain LI99_RS26500 PF03461 TRCF domain LI99_RS26500 PF00271 Helicase conserved C-terminal domain LI99_RS26500 PF00270 DEAD/DEAH box helicase LI99_RS26500 PF02559 CarD-like/TRCF domain LI99_RS26500 PF17757 UvrB interaction domain LI99_RS26505 PF18665 Tetracyclin repressor-like, C-terminal domain LI99_RS26505 PF00440 Bacterial regulatory proteins, tetR family LI99_RS26515 PF12804 MobA-like NTP transferase domain LI99_RS26515 PF00132 Bacterial transferase hexapeptide (six repeats) LI99_RS26520 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LI99_RS26520 PF14572 Phosphoribosyl synthetase-associated domain LI99_RS26525 PF03960 ArsC family LI99_RS26530 PF10738 Probable lipoprotein LpqN LI99_RS26535 PF00106 short chain dehydrogenase LI99_RS26540 PF14693 Ribosomal protein TL5, C-terminal domain LI99_RS26540 PF01386 Ribosomal L25p family LI99_RS26545 PF01195 Peptidyl-tRNA hydrolase LI99_RS26560 PF14535 AMP-binding enzyme C-terminal domain LI99_RS26560 PF00501 AMP-binding enzyme LI99_RS26565 PF00288 GHMP kinases N terminal domain LI99_RS26565 PF08544 GHMP kinases C terminal LI99_RS26570 PF03793 PASTA domain LI99_RS26570 PF00069 Protein kinase domain LI99_RS26575 PF00398 Ribosomal RNA adenine dimethylase LI99_RS26580 PF06737 Transglycosylase-like domain LI99_RS26580 PF07501 G5 domain LI99_RS26580 PF03990 G5-linked-Ubiquitin-like domain LI99_RS26585 PF01026 TatD related DNase LI99_RS26590 PF09334 tRNA synthetases class I (M) LI99_RS26595 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LI99_RS26595 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LI99_RS26600 PF14759 Reductase C-terminal LI99_RS26600 PF07992 Pyridine nucleotide-disulphide oxidoreductase LI99_RS26610 PF04715 Anthranilate synthase component I, N terminal region LI99_RS26610 PF00425 chorismate binding enzyme LI99_RS26615 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LI99_RS26620 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase LI99_RS26620 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase LI99_RS26635 PF09278 MerR, DNA binding LI99_RS26635 PF00376 MerR family regulatory protein LI99_RS26660 PF00934 PE family LI99_RS26660 PF08237 PE-PPE domain LI99_RS26665 PF10738 Probable lipoprotein LpqN LI99_RS26670 PF08501 Shikimate dehydrogenase substrate binding domain LI99_RS26675 PF00027 Cyclic nucleotide-binding domain LI99_RS26675 PF13302 Acetyltransferase (GNAT) domain LI99_RS26695 PF00892 EamA-like transporter family LI99_RS26700 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LI99_RS26700 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LI99_RS26735 PF03453 MoeA N-terminal region (domain I and II) LI99_RS26735 PF03454 MoeA C-terminal region (domain IV) LI99_RS26735 PF00994 Probable molybdopterin binding domain LI99_RS26740 PF00483 Nucleotidyl transferase LI99_RS26745 PF01812 5-formyltetrahydrofolate cyclo-ligase family LI99_RS26750 PF00324 Amino acid permease LI99_RS26760 PF09339 IclR helix-turn-helix domain LI99_RS26760 PF01614 Bacterial transcriptional regulator LI99_RS26765 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LI99_RS26765 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LI99_RS26765 PF00205 Thiamine pyrophosphate enzyme, central domain LI99_RS26770 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LI99_RS26770 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LI99_RS26775 PF01261 Xylose isomerase-like TIM barrel LI99_RS26795 PF01741 Large-conductance mechanosensitive channel, MscL LI99_RS26800 PF09203 MspA LI99_RS26810 PF01967 MoaC family LI99_RS26810 PF00994 Probable molybdopterin binding domain LI99_RS26815 PF13180 PDZ domain LI99_RS26820 PF00672 HAMP domain LI99_RS26820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI99_RS26820 PF00512 His Kinase A (phospho-acceptor) domain LI99_RS26825 PF00072 Response regulator receiver domain LI99_RS26825 PF00486 Transcriptional regulatory protein, C terminal LI99_RS26830 PF01783 Ribosomal L32p protein family LI99_RS26840 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS26840 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS26840 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS26845 PF01039 Carboxyl transferase domain LI99_RS26850 PF00364 Biotin-requiring enzyme LI99_RS26850 PF00289 Biotin carboxylase, N-terminal domain LI99_RS26850 PF02785 Biotin carboxylase C-terminal domain LI99_RS26850 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LI99_RS26855 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS26855 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS26855 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS26905 PF11066 Protein of unknown function (DUF2867) LI99_RS26905 PF13460 NAD(P)H-binding LI99_RS26910 PF08044 Domain of unknown function (DUF1707) LI99_RS26925 PF09423 PhoD-like phosphatase LI99_RS26925 PF16655 PhoD-like phosphatase, N-terminal domain LI99_RS26950 PF17863 AAA lid domain LI99_RS26950 PF01078 Magnesium chelatase, subunit ChlI LI99_RS26955 PF00069 Protein kinase domain LI99_RS26965 PF01808 AICARFT/IMPCHase bienzyme LI99_RS26965 PF02142 MGS-like domain LI99_RS26970 PF00551 Formyl transferase LI99_RS26980 PF17270 Family of unknown function (DUF5336) LI99_RS26985 PF00296 Luciferase-like monooxygenase LI99_RS26990 PF00296 Luciferase-like monooxygenase LI99_RS27005 PF00326 Prolyl oligopeptidase family LI99_RS27010 PF02629 CoA binding domain LI99_RS27010 PF00549 CoA-ligase LI99_RS27015 PF08442 ATP-grasp domain LI99_RS27015 PF00549 CoA-ligase LI99_RS27020 PF01551 Peptidase family M23 LI99_RS27040 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS27045 PF00005 ABC transporter LI99_RS27050 PF02910 Fumarate reductase flavoprotein C-term LI99_RS27050 PF00890 FAD binding domain LI99_RS27060 PF00580 UvrD/REP helicase N-terminal domain LI99_RS27060 PF13361 UvrD-like helicase C-terminal domain LI99_RS27070 PF01817 Chorismate mutase type II LI99_RS27075 PF01757 Acyltransferase family LI99_RS27085 PF00171 Aldehyde dehydrogenase family LI99_RS27090 PF00342 Phosphoglucose isomerase LI99_RS27110 PF00106 short chain dehydrogenase LI99_RS27115 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LI99_RS27115 PF06827 Zinc finger found in FPG and IleRS LI99_RS27125 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV LI99_RS27130 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LI99_RS27135 PF16170 Domain of unknown function (DUF4873) LI99_RS27155 PF01739 CheR methyltransferase, SAM binding domain LI99_RS27155 PF01339 CheB methylesterase LI99_RS27155 PF03705 CheR methyltransferase, all-alpha domain LI99_RS27155 PF08448 PAS fold LI99_RS27170 PF00296 Luciferase-like monooxygenase LI99_RS27175 PF07690 Major Facilitator Superfamily LI99_RS27190 PF00083 Sugar (and other) transporter LI99_RS27200 PF00075 RNase H LI99_RS27210 PF12833 Helix-turn-helix domain LI99_RS27210 PF01965 DJ-1/PfpI family LI99_RS27215 PF02525 Flavodoxin-like fold LI99_RS27225 PF01047 MarR family LI99_RS27235 PF00106 short chain dehydrogenase LI99_RS27240 PF00106 short chain dehydrogenase LI99_RS27245 PF04679 ATP dependent DNA ligase C terminal region LI99_RS27245 PF13298 DNA polymerase Ligase (LigD) LI99_RS27245 PF01068 ATP dependent DNA ligase domain LI99_RS27250 PF17912 MalK OB fold domain LI99_RS27250 PF00005 ABC transporter LI99_RS27255 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS27260 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS27270 PF04198 Putative sugar-binding domain LI99_RS27275 PF08125 Mannitol dehydrogenase C-terminal domain LI99_RS27275 PF01232 Mannitol dehydrogenase Rossmann domain LI99_RS27280 PF00294 pfkB family carbohydrate kinase LI99_RS27295 PF02735 Ku70/Ku80 beta-barrel domain LI99_RS27300 PF09529 Integral membrane protein (intg_mem_TP0381) LI99_RS27310 PF02720 Domain of unknown function (DUF222) LI99_RS27335 PF01566 Natural resistance-associated macrophage protein LI99_RS27335 PF03358 NADPH-dependent FMN reductase LI99_RS27345 PF04107 Glutamate-cysteine ligase family 2(GCS2) LI99_RS27355 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LI99_RS27355 PF00205 Thiamine pyrophosphate enzyme, central domain LI99_RS27355 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LI99_RS27360 PF01645 Conserved region in glutamate synthase LI99_RS27365 PF01047 MarR family LI99_RS27405 PF01022 Bacterial regulatory protein, arsR family LI99_RS27415 PF01654 Cytochrome bd terminal oxidase subunit I LI99_RS27430 PF02803 Thiolase, C-terminal domain LI99_RS27430 PF00108 Thiolase, N-terminal domain LI99_RS27435 PF03055 Retinal pigment epithelial membrane protein LI99_RS27440 PF01638 HxlR-like helix-turn-helix LI99_RS27445 PF00011 Hsp20/alpha crystallin family LI99_RS27475 PF09167 Domain of unknown function (DUF1942) LI99_RS27480 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS27480 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS27480 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS27485 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS27485 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS27485 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS27490 PF00378 Enoyl-CoA hydratase/isomerase LI99_RS27495 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS27495 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS27495 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS27500 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS27500 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS27500 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS27505 PF02515 CoA-transferase family III LI99_RS27510 PF00106 short chain dehydrogenase LI99_RS27515 PF00743 Flavin-binding monooxygenase-like LI99_RS27535 PF08450 SMP-30/Gluconolactonase/LRE-like region LI99_RS27540 PF07702 UTRA domain LI99_RS27540 PF00392 Bacterial regulatory proteins, gntR family LI99_RS27545 PF00501 AMP-binding enzyme LI99_RS27545 PF13193 AMP-binding enzyme C-terminal domain LI99_RS27555 PF00501 AMP-binding enzyme LI99_RS27555 PF13193 AMP-binding enzyme C-terminal domain LI99_RS27560 PF10604 Polyketide cyclase / dehydrase and lipid transport LI99_RS27565 PF14013 MT0933-like antitoxin protein LI99_RS27575 PF00144 Beta-lactamase LI99_RS27580 PF12706 Beta-lactamase superfamily domain LI99_RS27585 PF00378 Enoyl-CoA hydratase/isomerase LI99_RS27595 PF13439 Glycosyltransferase Family 4 LI99_RS27600 PF01039 Carboxyl transferase domain LI99_RS27615 PF00005 ABC transporter LI99_RS27615 PF12857 TOBE-like domain LI99_RS27635 PF00501 AMP-binding enzyme LI99_RS27635 PF13193 AMP-binding enzyme C-terminal domain LI99_RS27640 PF00501 AMP-binding enzyme LI99_RS27640 PF13193 AMP-binding enzyme C-terminal domain LI99_RS27655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI99_RS27655 PF03466 LysR substrate binding domain LI99_RS27660 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LI99_RS27665 PF00795 Carbon-nitrogen hydrolase LI99_RS27670 PF00815 Histidinol dehydrogenase LI99_RS27675 PF03466 LysR substrate binding domain LI99_RS27675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI99_RS27680 PF06441 Epoxide hydrolase N terminus LI99_RS27685 PF00005 ABC transporter LI99_RS27685 PF00664 ABC transporter transmembrane region LI99_RS27690 PF00664 ABC transporter transmembrane region LI99_RS27690 PF00005 ABC transporter LI99_RS27695 PF00005 ABC transporter LI99_RS27695 PF00664 ABC transporter transmembrane region LI99_RS27700 PF00486 Transcriptional regulatory protein, C terminal LI99_RS27700 PF00072 Response regulator receiver domain LI99_RS27705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI99_RS27705 PF00672 HAMP domain LI99_RS27705 PF00512 His Kinase A (phospho-acceptor) domain LI99_RS27710 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LI99_RS27715 PF10944 Protein of unknown function (DUF2630) LI99_RS27730 PF01047 MarR family LI99_RS27735 PF07690 Major Facilitator Superfamily LI99_RS27740 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LI99_RS27740 PF04073 Aminoacyl-tRNA editing domain LI99_RS27740 PF03129 Anticodon binding domain LI99_RS27745 PF00285 Citrate synthase, C-terminal domain LI99_RS27750 PF17754 MftR C-terminal domain LI99_RS27750 PF00440 Bacterial regulatory proteins, tetR family LI99_RS27760 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LI99_RS27760 PF01243 Pyridoxamine 5'-phosphate oxidase LI99_RS27765 PF00285 Citrate synthase, C-terminal domain LI99_RS27775 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LI99_RS27785 PF18029 Glyoxalase-like domain LI99_RS27790 PF07992 Pyridine nucleotide-disulphide oxidoreductase LI99_RS27790 PF00037 4Fe-4S binding domain LI99_RS27795 PF11583 P-aminobenzoate N-oxygenase AurF LI99_RS27800 PF00557 Metallopeptidase family M24 LI99_RS27805 PF00266 Aminotransferase class-V LI99_RS27810 PF11268 Protein of unknown function (DUF3071) LI99_RS27815 PF10801 Protein of unknown function (DUF2537) LI99_RS27820 PF00588 SpoU rRNA Methylase family LI99_RS27825 PF01047 MarR family LI99_RS27830 PF10745 Protein of unknown function (DUF2530) LI99_RS27840 PF11228 Protein of unknown function (DUF3027) LI99_RS27845 PF07690 Major Facilitator Superfamily LI99_RS27850 PF10969 Protein of unknown function (DUF2771) LI99_RS27855 PF13409 Glutathione S-transferase, N-terminal domain LI99_RS27860 PF00313 'Cold-shock' DNA-binding domain LI99_RS27865 PF03733 Inner membrane component domain LI99_RS27870 PF06463 Molybdenum Cofactor Synthesis C LI99_RS27870 PF04055 Radical SAM superfamily LI99_RS27880 PF06737 Transglycosylase-like domain LI99_RS27885 PF02391 MoaE protein LI99_RS27890 PF00994 Probable molybdopterin binding domain LI99_RS27890 PF01967 MoaC family LI99_RS27895 PF01967 MoaC family LI99_RS27945 PF06779 Uncharacterised MFS-type transporter YbfB LI99_RS27965 PF00296 Luciferase-like monooxygenase LI99_RS27975 PF08361 MAATS-type transcriptional repressor, C-terminal region LI99_RS27975 PF00440 Bacterial regulatory proteins, tetR family LI99_RS27980 PF01494 FAD binding domain LI99_RS27985 PF00378 Enoyl-CoA hydratase/isomerase LI99_RS27985 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LI99_RS27985 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LI99_RS27990 PF00108 Thiolase, N-terminal domain LI99_RS27990 PF02803 Thiolase, C-terminal domain LI99_RS28000 PF01042 Endoribonuclease L-PSP LI99_RS28010 PF00155 Aminotransferase class I and II LI99_RS28020 PF03561 Allantoicase repeat LI99_RS28030 PF01177 Asp/Glu/Hydantoin racemase LI99_RS28035 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LI99_RS28050 PF00582 Universal stress protein family LI99_RS28055 PF02515 CoA-transferase family III LI99_RS28060 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LI99_RS28060 PF00205 Thiamine pyrophosphate enzyme, central domain LI99_RS28060 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LI99_RS28080 PF00501 AMP-binding enzyme LI99_RS28080 PF07993 Male sterility protein LI99_RS28080 PF00550 Phosphopantetheine attachment site LI99_RS28105 PF05121 Gas vesicle protein K LI99_RS28105 PF00741 Gas vesicle protein LI99_RS28110 PF00741 Gas vesicle protein LI99_RS28145 PF00149 Calcineurin-like phosphoesterase LI99_RS28155 PF00589 Phage integrase family LI99_RS28155 PF14659 Phage integrase, N-terminal SAM-like domain LI99_RS28180 PF00934 PE family LI99_RS28180 PF08237 PE-PPE domain LI99_RS28185 PF00392 Bacterial regulatory proteins, gntR family LI99_RS28185 PF00155 Aminotransferase class I and II LI99_RS28195 PF02801 Beta-ketoacyl synthase, C-terminal domain LI99_RS28195 PF08240 Alcohol dehydrogenase GroES-like domain LI99_RS28195 PF08990 Erythronolide synthase docking LI99_RS28195 PF08659 KR domain LI99_RS28195 PF00550 Phosphopantetheine attachment site LI99_RS28195 PF00109 Beta-ketoacyl synthase, N-terminal domain LI99_RS28195 PF14765 Polyketide synthase dehydratase LI99_RS28195 PF00698 Acyl transferase domain LI99_RS28195 PF16197 Ketoacyl-synthetase C-terminal extension LI99_RS28210 PF01152 Bacterial-like globin LI99_RS28245 PF03405 Fatty acid desaturase LI99_RS28250 PF01207 Dihydrouridine synthase (Dus) LI99_RS28260 PF01895 PhoU domain LI99_RS28270 PF08240 Alcohol dehydrogenase GroES-like domain LI99_RS28270 PF00107 Zinc-binding dehydrogenase LI99_RS28275 PF00005 ABC transporter LI99_RS28280 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS28285 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS28290 PF12849 PBP superfamily domain LI99_RS28295 PF00583 Acetyltransferase (GNAT) family LI99_RS28300 PF00486 Transcriptional regulatory protein, C terminal LI99_RS28325 PF00581 Rhodanese-like domain LI99_RS28330 PF07210 Protein of unknown function (DUF1416) LI99_RS28340 PF08768 Domain of unknown function (DUF1794) LI99_RS28370 PF02769 AIR synthase related protein, C-terminal domain LI99_RS28370 PF00586 AIR synthase related protein, N-terminal domain LI99_RS28375 PF11066 Protein of unknown function (DUF2867) LI99_RS28375 PF13460 NAD(P)H-binding LI99_RS28380 PF00156 Phosphoribosyl transferase domain LI99_RS28410 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS28415 PF03180 NLPA lipoprotein LI99_RS28420 PF00296 Luciferase-like monooxygenase LI99_RS28425 PF00440 Bacterial regulatory proteins, tetR family LI99_RS28425 PF16859 Tetracyclin repressor-like, C-terminal domain LI99_RS28445 PF00171 Aldehyde dehydrogenase family LI99_RS28465 PF01243 Pyridoxamine 5'-phosphate oxidase LI99_RS28490 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LI99_RS28490 PF02769 AIR synthase related protein, C-terminal domain LI99_RS28490 PF00586 AIR synthase related protein, N-terminal domain LI99_RS28500 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LI99_RS28500 PF00205 Thiamine pyrophosphate enzyme, central domain LI99_RS28500 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LI99_RS28510 PF02127 Aminopeptidase I zinc metalloprotease (M18) LI99_RS28515 PF04261 Dyp-type peroxidase family LI99_RS28520 PF04454 Encapsulating protein for peroxidase LI99_RS28530 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase LI99_RS28545 PF00890 FAD binding domain LI99_RS28555 PF00255 Glutathione peroxidase LI99_RS28570 PF00326 Prolyl oligopeptidase family LI99_RS28570 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LI99_RS28575 PF01259 SAICAR synthetase LI99_RS28600 PF00067 Cytochrome P450 LI99_RS28605 PF00206 Lyase LI99_RS28605 PF10397 Adenylosuccinate lyase C-terminus LI99_RS28615 PF13520 Amino acid permease LI99_RS28630 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LI99_RS28630 PF02843 Phosphoribosylglycinamide synthetase, C domain LI99_RS28630 PF02844 Phosphoribosylglycinamide synthetase, N domain LI99_RS28635 PF00067 Cytochrome P450 LI99_RS28655 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LI99_RS28655 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LI99_RS28665 PF00171 Aldehyde dehydrogenase family LI99_RS28670 PF00440 Bacterial regulatory proteins, tetR family LI99_RS28675 PF00067 Cytochrome P450 LI99_RS28680 PF00106 short chain dehydrogenase LI99_RS28685 PF00067 Cytochrome P450 LI99_RS28700 PF08240 Alcohol dehydrogenase GroES-like domain LI99_RS28700 PF00107 Zinc-binding dehydrogenase LI99_RS28720 PF01230 HIT domain LI99_RS28725 PF00512 His Kinase A (phospho-acceptor) domain LI99_RS28725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI99_RS28725 PF00672 HAMP domain LI99_RS28730 PF00072 Response regulator receiver domain LI99_RS28730 PF00486 Transcriptional regulatory protein, C terminal LI99_RS28770 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LI99_RS28770 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LI99_RS28780 PF00941 FAD binding domain in molybdopterin dehydrogenase LI99_RS28780 PF03450 CO dehydrogenase flavoprotein C-terminal domain LI99_RS28785 PF00111 2Fe-2S iron-sulfur cluster binding domain LI99_RS28785 PF01799 [2Fe-2S] binding domain LI99_RS28790 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LI99_RS28790 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LI99_RS28800 PF00378 Enoyl-CoA hydratase/isomerase LI99_RS28825 PF00982 Glycosyltransferase family 20 LI99_RS28850 PF02470 MlaD protein LI99_RS28875 PF02405 Permease MlaE LI99_RS28880 PF02405 Permease MlaE LI99_RS28895 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS28895 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS28895 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS28900 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS28900 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS28905 PF13193 AMP-binding enzyme C-terminal domain LI99_RS28905 PF00501 AMP-binding enzyme LI99_RS28910 PF16363 GDP-mannose 4,6 dehydratase LI99_RS28915 PF12833 Helix-turn-helix domain LI99_RS28925 PF00171 Aldehyde dehydrogenase family LI99_RS28930 PF03060 Nitronate monooxygenase LI99_RS28935 PF13193 AMP-binding enzyme C-terminal domain LI99_RS28935 PF00501 AMP-binding enzyme LI99_RS28940 PF00378 Enoyl-CoA hydratase/isomerase LI99_RS28955 PF00067 Cytochrome P450 LI99_RS28965 PF00296 Luciferase-like monooxygenase LI99_RS28980 PF00814 Glycoprotease family LI99_RS28990 PF00355 Rieske [2Fe-2S] domain LI99_RS29040 PF16124 RecQ zinc-binding LI99_RS29040 PF00270 DEAD/DEAH box helicase LI99_RS29040 PF00570 HRDC domain LI99_RS29040 PF09382 RQC domain LI99_RS29040 PF00271 Helicase conserved C-terminal domain LI99_RS29050 PF07836 DmpG-like communication domain LI99_RS29050 PF00682 HMGL-like LI99_RS29055 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation LI99_RS29055 PF01118 Semialdehyde dehydrogenase, NAD binding domain LI99_RS29060 PF01557 Fumarylacetoacetate (FAA) hydrolase family LI99_RS29065 PF00890 FAD binding domain LI99_RS29070 PF01575 MaoC like domain LI99_RS29075 PF00501 AMP-binding enzyme LI99_RS29075 PF13193 AMP-binding enzyme C-terminal domain LI99_RS29080 PF00732 GMC oxidoreductase LI99_RS29080 PF05199 GMC oxidoreductase LI99_RS29090 PF00132 Bacterial transferase hexapeptide (six repeats) LI99_RS29110 PF12464 Maltose acetyltransferase LI99_RS29110 PF00132 Bacterial transferase hexapeptide (six repeats) LI99_RS29115 PF00534 Glycosyl transferases group 1 LI99_RS29115 PF13439 Glycosyltransferase Family 4 LI99_RS29140 PF16363 GDP-mannose 4,6 dehydratase LI99_RS29145 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LI99_RS29145 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LI99_RS29145 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LI99_RS29180 PF13579 Glycosyl transferase 4-like domain LI99_RS29180 PF00534 Glycosyl transferases group 1 LI99_RS29195 PF00732 GMC oxidoreductase LI99_RS29195 PF05199 GMC oxidoreductase LI99_RS29200 PF01943 Polysaccharide biosynthesis protein LI99_RS29210 PF00202 Aminotransferase class-III LI99_RS29225 PF08421 Putative zinc binding domain LI99_RS29225 PF08484 C-methyltransferase C-terminal domain LI99_RS29230 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LI99_RS29245 PF00483 Nucleotidyl transferase LI99_RS29250 PF08421 Putative zinc binding domain LI99_RS29250 PF08484 C-methyltransferase C-terminal domain LI99_RS29260 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LI99_RS29260 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LI99_RS29260 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LI99_RS29265 PF00483 Nucleotidyl transferase LI99_RS29270 PF02397 Bacterial sugar transferase LI99_RS29275 PF16363 GDP-mannose 4,6 dehydratase LI99_RS29280 PF01380 SIS domain LI99_RS29310 PF13452 N-terminal half of MaoC dehydratase LI99_RS29315 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS29315 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS29315 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS29320 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS29320 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS29325 PF00067 Cytochrome P450 LI99_RS29330 PF00108 Thiolase, N-terminal domain LI99_RS29330 PF02803 Thiolase, C-terminal domain LI99_RS29340 PF04075 F420H(2)-dependent quinone reductase LI99_RS29355 PF00378 Enoyl-CoA hydratase/isomerase LI99_RS29360 PF01144 Coenzyme A transferase LI99_RS29370 PF03060 Nitronate monooxygenase LI99_RS29390 PF00108 Thiolase, N-terminal domain LI99_RS29390 PF02803 Thiolase, C-terminal domain LI99_RS29395 PF00440 Bacterial regulatory proteins, tetR family LI99_RS29395 PF17932 Tetracyclin repressor-like, C-terminal domain LI99_RS29410 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS29410 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS29410 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS29415 PF13193 AMP-binding enzyme C-terminal domain LI99_RS29415 PF00501 AMP-binding enzyme LI99_RS29420 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS29420 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS29420 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS29425 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS29425 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS29425 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS29430 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS29430 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS29430 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS29435 PF00155 Aminotransferase class I and II LI99_RS29440 PF02653 Branched-chain amino acid transport system / permease component LI99_RS29445 PF00005 ABC transporter LI99_RS29450 PF13407 Periplasmic binding protein domain LI99_RS29455 PF01261 Xylose isomerase-like TIM barrel LI99_RS29460 PF00480 ROK family LI99_RS29475 PF00501 AMP-binding enzyme LI99_RS29475 PF13193 AMP-binding enzyme C-terminal domain LI99_RS29485 PF00083 Sugar (and other) transporter LI99_RS29490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI99_RS29490 PF03466 LysR substrate binding domain LI99_RS29500 PF00067 Cytochrome P450 LI99_RS29520 PF01613 Flavin reductase like domain LI99_RS29525 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LI99_RS29530 PF00561 alpha/beta hydrolase fold LI99_RS29535 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS29540 PF00175 Oxidoreductase NAD-binding domain LI99_RS29540 PF00970 Oxidoreductase FAD-binding domain LI99_RS29540 PF00111 2Fe-2S iron-sulfur cluster binding domain LI99_RS29550 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS29550 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS29550 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS29555 PF00440 Bacterial regulatory proteins, tetR family LI99_RS29555 PF17925 Tetracyclin repressor-like, C-terminal domain LI99_RS29565 PF00356 Bacterial regulatory proteins, lacI family LI99_RS29570 PF00950 ABC 3 transport family LI99_RS29575 PF00005 ABC transporter LI99_RS29580 PF01297 Zinc-uptake complex component A periplasmic LI99_RS29585 PF07683 Cobalamin synthesis protein cobW C-terminal domain LI99_RS29585 PF02492 CobW/HypB/UreG, nucleotide-binding domain LI99_RS29595 PF01297 Zinc-uptake complex component A periplasmic LI99_RS29605 PF00950 ABC 3 transport family LI99_RS29610 PF00005 ABC transporter LI99_RS29615 PF00881 Nitroreductase family LI99_RS29620 PF03746 LamB/YcsF family LI99_RS29635 PF09203 MspA LI99_RS29645 PF07371 Protein of unknown function (DUF1490) LI99_RS29650 PF03773 Predicted permease LI99_RS29660 PF00005 ABC transporter LI99_RS29665 PF01032 FecCD transport family LI99_RS29675 PF01084 Ribosomal protein S18 LI99_RS29680 PF00253 Ribosomal protein S14p/S29e LI99_RS29685 PF00471 Ribosomal protein L33 LI99_RS29690 PF00830 Ribosomal L28 family LI99_RS29695 PF07683 Cobalamin synthesis protein cobW C-terminal domain LI99_RS29695 PF02492 CobW/HypB/UreG, nucleotide-binding domain LI99_RS29700 PF01197 Ribosomal protein L31 LI99_RS29710 PF02040 Arsenical pump membrane protein LI99_RS29715 PF08032 RNA 2'-O ribose methyltransferase substrate binding LI99_RS29715 PF00588 SpoU rRNA Methylase family LI99_RS29720 PF09190 DALR domain LI99_RS29720 PF01406 tRNA synthetases class I (C) catalytic domain LI99_RS29725 PF02542 YgbB family LI99_RS29730 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LI99_RS29735 PF02559 CarD-like/TRCF domain LI99_RS29745 PF06745 KaiC LI99_RS29745 PF18073 Rubredoxin metal binding domain LI99_RS29750 PF02457 DisA bacterial checkpoint controller nucleotide-binding LI99_RS29750 PF10635 DisA bacterial checkpoint controller linker region LI99_RS29750 PF12826 Helix-hairpin-helix motif LI99_RS29760 PF00484 Carbonic anhydrase LI99_RS29765 PF00633 Helix-hairpin-helix motif LI99_RS29765 PF00730 HhH-GPD superfamily base excision DNA repair protein LI99_RS29765 PF10576 Iron-sulfur binding domain of endonuclease III LI99_RS29770 PF01965 DJ-1/PfpI family LI99_RS29785 PF03992 Antibiotic biosynthesis monooxygenase LI99_RS29810 PF00004 ATPase family associated with various cellular activities (AAA) LI99_RS29810 PF10431 C-terminal, D2-small domain, of ClpB protein LI99_RS29810 PF02861 Clp amino terminal domain, pathogenicity island component LI99_RS29810 PF17871 AAA lid domain LI99_RS29810 PF07724 AAA domain (Cdc48 subfamily) LI99_RS29815 PF11774 Lsr2 LI99_RS29820 PF01336 OB-fold nucleic acid binding domain LI99_RS29820 PF00152 tRNA synthetases class II (D, K and N) LI99_RS29830 PF03309 Type III pantothenate kinase LI99_RS29835 PF02569 Pantoate-beta-alanine ligase LI99_RS29855 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LI99_RS29860 PF02152 Dihydroneopterin aldolase LI99_RS29865 PF00809 Pterin binding enzyme LI99_RS29870 PF01227 GTP cyclohydrolase I LI99_RS29875 PF17862 AAA+ lid domain LI99_RS29875 PF01434 Peptidase family M41 LI99_RS29875 PF00004 ATPase family associated with various cellular activities (AAA) LI99_RS29880 PF00561 alpha/beta hydrolase fold LI99_RS29885 PF00296 Luciferase-like monooxygenase LI99_RS29890 PF00107 Zinc-binding dehydrogenase LI99_RS29890 PF08240 Alcohol dehydrogenase GroES-like domain LI99_RS29900 PF00156 Phosphoribosyl transferase domain LI99_RS29905 PF01171 PP-loop family LI99_RS29905 PF09179 TilS substrate binding domain LI99_RS29915 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family LI99_RS29920 PF00719 Inorganic pyrophosphatase LI99_RS29930 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LI99_RS29930 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LI99_RS29935 PF13378 Enolase C-terminal domain-like LI99_RS29940 PF01614 Bacterial transcriptional regulator LI99_RS29940 PF09339 IclR helix-turn-helix domain LI99_RS29950 PF00005 ABC transporter LI99_RS29950 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LI99_RS29955 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LI99_RS29955 PF00005 ABC transporter LI99_RS29960 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS29960 PF12911 N-terminal TM domain of oligopeptide transport permease C LI99_RS29965 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS29970 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LI99_RS29975 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LI99_RS29975 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LI99_RS29980 PF03466 LysR substrate binding domain LI99_RS29980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI99_RS29985 PF01740 STAS domain LI99_RS29995 PF00072 Response regulator receiver domain LI99_RS30000 PF01590 GAF domain LI99_RS30000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI99_RS30000 PF00512 His Kinase A (phospho-acceptor) domain LI99_RS30000 PF08446 PAS fold LI99_RS30000 PF00360 Phytochrome region LI99_RS30005 PF00072 Response regulator receiver domain LI99_RS30005 PF00486 Transcriptional regulatory protein, C terminal LI99_RS30010 PF13378 Enolase C-terminal domain-like LI99_RS30010 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LI99_RS30015 PF00701 Dihydrodipicolinate synthetase family LI99_RS30020 PF00171 Aldehyde dehydrogenase family LI99_RS30030 PF03741 Integral membrane protein TerC family LI99_RS30035 PF13193 AMP-binding enzyme C-terminal domain LI99_RS30035 PF08241 Methyltransferase domain LI99_RS30035 PF00391 PEP-utilising enzyme, mobile domain LI99_RS30035 PF00501 AMP-binding enzyme LI99_RS30035 PF00975 Thioesterase domain LI99_RS30035 PF00550 Phosphopantetheine attachment site LI99_RS30035 PF00668 Condensation domain LI99_RS30040 PF11838 ERAP1-like C-terminal domain LI99_RS30040 PF01433 Peptidase family M1 domain LI99_RS30050 PF00440 Bacterial regulatory proteins, tetR family LI99_RS30055 PF07969 Amidohydrolase family LI99_RS30060 PF16363 GDP-mannose 4,6 dehydratase LI99_RS30070 PF08237 PE-PPE domain LI99_RS30100 PF02627 Carboxymuconolactone decarboxylase family LI99_RS30105 PF00561 alpha/beta hydrolase fold LI99_RS30115 PF09115 DNA polymerase III, delta subunit, C terminal LI99_RS30120 PF00211 Adenylate and Guanylate cyclase catalytic domain LI99_RS30120 PF00672 HAMP domain LI99_RS30135 PF01751 Toprim domain LI99_RS30135 PF13368 Topoisomerase C-terminal repeat LI99_RS30135 PF01131 DNA topoisomerase LI99_RS30145 PF00313 'Cold-shock' DNA-binding domain LI99_RS30150 PF00270 DEAD/DEAH box helicase LI99_RS30150 PF09369 Domain of unknown function (DUF1998) LI99_RS30150 PF00271 Helicase conserved C-terminal domain LI99_RS30195 PF00437 Type II/IV secretion system protein LI99_RS30210 PF01614 Bacterial transcriptional regulator LI99_RS30210 PF09339 IclR helix-turn-helix domain LI99_RS30215 PF05035 2-keto-3-deoxy-galactonokinase LI99_RS30220 PF01081 KDPG and KHG aldolase LI99_RS30225 PF13378 Enolase C-terminal domain-like LI99_RS30225 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LI99_RS30230 PF07690 Major Facilitator Superfamily LI99_RS30240 PF00501 AMP-binding enzyme LI99_RS30240 PF16177 Acetyl-coenzyme A synthetase N-terminus LI99_RS30240 PF13193 AMP-binding enzyme C-terminal domain LI99_RS30260 PF02674 Colicin V production protein LI99_RS30265 PF00293 NUDIX domain LI99_RS30270 PF00085 Thioredoxin LI99_RS30275 PF10576 Iron-sulfur binding domain of endonuclease III LI99_RS30275 PF00633 Helix-hairpin-helix motif LI99_RS30275 PF00730 HhH-GPD superfamily base excision DNA repair protein LI99_RS30285 PF13545 Crp-like helix-turn-helix domain LI99_RS30285 PF00027 Cyclic nucleotide-binding domain LI99_RS30290 PF16123 Hydroxyacylglutathione hydrolase C-terminus LI99_RS30290 PF00753 Metallo-beta-lactamase superfamily LI99_RS30305 PF02374 Anion-transporting ATPase LI99_RS30310 PF02374 Anion-transporting ATPase LI99_RS30320 PF00324 Amino acid permease LI99_RS30325 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LI99_RS30325 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LI99_RS30330 PF13556 PucR C-terminal helix-turn-helix domain LI99_RS30330 PF17853 GGDEF-like domain LI99_RS30330 PF06018 CodY GAF-like domain LI99_RS30335 PF02467 Transcription factor WhiB LI99_RS30345 PF00912 Transglycosylase LI99_RS30345 PF00905 Penicillin binding protein transpeptidase domain LI99_RS30350 PF10518 TAT (twin-arginine translocation) pathway signal sequence LI99_RS30350 PF00149 Calcineurin-like phosphoesterase LI99_RS30355 PF00291 Pyridoxal-phosphate dependent enzyme LI99_RS30370 PF00069 Protein kinase domain LI99_RS30370 PF03793 PASTA domain LI99_RS30375 PF10604 Polyketide cyclase / dehydrase and lipid transport LI99_RS30405 PF05067 Manganese containing catalase LI99_RS30430 PF14258 Domain of unknown function (DUF4350) LI99_RS30435 PF17863 AAA lid domain LI99_RS30435 PF07726 ATPase family associated with various cellular activities (AAA) LI99_RS30455 PF00440 Bacterial regulatory proteins, tetR family LI99_RS30460 PF07690 Major Facilitator Superfamily LI99_RS30465 PF03055 Retinal pigment epithelial membrane protein LI99_RS30475 PF03551 Transcriptional regulator PadR-like family LI99_RS30485 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LI99_RS30485 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LI99_RS30490 PF00398 Ribosomal RNA adenine dimethylase LI99_RS30500 PF00199 Catalase LI99_RS30500 PF06628 Catalase-related immune-responsive LI99_RS30505 PF12706 Beta-lactamase superfamily domain LI99_RS30515 PF13847 Methyltransferase domain LI99_RS30525 PF00072 Response regulator receiver domain LI99_RS30525 PF00196 Bacterial regulatory proteins, luxR family LI99_RS30530 PF07730 Histidine kinase LI99_RS30530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI99_RS30535 PF00465 Iron-containing alcohol dehydrogenase LI99_RS30550 PF00465 Iron-containing alcohol dehydrogenase LI99_RS30565 PF07690 Major Facilitator Superfamily LI99_RS30570 PF00266 Aminotransferase class-V LI99_RS30575 PF10017 Histidine-specific methyltransferase, SAM-dependent LI99_RS30585 PF03781 Sulfatase-modifying factor enzyme 1 LI99_RS30585 PF12867 DinB superfamily LI99_RS30590 PF04107 Glutamate-cysteine ligase family 2(GCS2) LI99_RS30605 PF01475 Ferric uptake regulator family LI99_RS30615 PF13810 Domain of unknown function (DUF4185) LI99_RS30620 PF01118 Semialdehyde dehydrogenase, NAD binding domain LI99_RS30620 PF02774 Semialdehyde dehydrogenase, dimerisation domain LI99_RS30625 PF00696 Amino acid kinase family LI99_RS30625 PF01842 ACT domain LI99_RS30625 PF13840 ACT domain LI99_RS30630 PF00881 Nitroreductase family LI99_RS30635 PF00909 Ammonium Transporter Family LI99_RS30640 PF00120 Glutamine synthetase, catalytic domain LI99_RS30650 PF01493 GXGXG motif LI99_RS30655 PF01645 Conserved region in glutamate synthase LI99_RS30660 PF01266 FAD dependent oxidoreductase LI99_RS30670 PF02211 Nitrile hydratase beta subunit LI99_RS30675 PF02979 Nitrile hydratase, alpha chain LI99_RS30685 PF03448 MgtE intracellular N domain LI99_RS30685 PF01769 Divalent cation transporter LI99_RS30685 PF00571 CBS domain LI99_RS30690 PF08502 LeuA allosteric (dimerisation) domain LI99_RS30690 PF00682 HMGL-like LI99_RS30695 PF05088 Bacterial NAD-glutamate dehydrogenase LI99_RS30705 PF00929 Exonuclease LI99_RS30710 PF08245 Mur ligase middle domain LI99_RS30710 PF08353 Domain of unknown function (DUF1727) LI99_RS30725 PF13662 Toprim domain LI99_RS30725 PF02132 RecR protein LI99_RS30730 PF02575 YbaB/EbfC DNA-binding family LI99_RS30735 PF01520 N-acetylmuramoyl-L-alanine amidase LI99_RS30755 PF12169 DNA polymerase III subunits gamma and tau domain III LI99_RS30760 PF12897 Alanine-glyoxylate amino-transferase LI99_RS30775 PF13180 PDZ domain LI99_RS30785 PF01266 FAD dependent oxidoreductase LI99_RS30790 PF03449 Transcription elongation factor, N-terminal LI99_RS30790 PF01272 Transcription elongation factor, GreA/GreB, C-term LI99_RS30800 PF02515 CoA-transferase family III LI99_RS30805 PF07690 Major Facilitator Superfamily LI99_RS30805 PF00083 Sugar (and other) transporter LI99_RS30810 PF00107 Zinc-binding dehydrogenase LI99_RS30810 PF08240 Alcohol dehydrogenase GroES-like domain LI99_RS30815 PF00171 Aldehyde dehydrogenase family LI99_RS30825 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LI99_RS30825 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LI99_RS30830 PF00392 Bacterial regulatory proteins, gntR family LI99_RS30830 PF07729 FCD domain LI99_RS30840 PF01068 ATP dependent DNA ligase domain LI99_RS30840 PF04679 ATP dependent DNA ligase C terminal region LI99_RS30845 PF04679 ATP dependent DNA ligase C terminal region LI99_RS30845 PF01068 ATP dependent DNA ligase domain LI99_RS30850 PF00135 Carboxylesterase family LI99_RS30860 PF00749 tRNA synthetases class I (E and Q), catalytic domain LI99_RS30875 PF00005 ABC transporter LI99_RS30885 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain LI99_RS30885 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain LI99_RS30895 PF00067 Cytochrome P450 LI99_RS30900 PF01702 Queuine tRNA-ribosyltransferase LI99_RS30910 PF00561 alpha/beta hydrolase fold LI99_RS30915 PF05481 Mycobacterium 19 kDa lipoprotein antigen LI99_RS30925 PF00905 Penicillin binding protein transpeptidase domain LI99_RS30930 PF18427 DD-reactivating factor swiveling domain LI99_RS30930 PF08841 Diol dehydratase reactivase ATPase-like domain LI99_RS30935 PF02287 Dehydratase small subunit LI99_RS30940 PF02286 Dehydratase large subunit LI99_RS30945 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain LI99_RS30945 PF06974 Protein of unknown function (DUF1298) LI99_RS30960 PF04075 F420H(2)-dependent quinone reductase LI99_RS30970 PF14437 MafB19-like deaminase LI99_RS30980 PF02153 Prephenate dehydrogenase LI99_RS30990 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS30995 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS31000 PF00005 ABC transporter LI99_RS31000 PF00571 CBS domain LI99_RS31005 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LI99_RS31010 PF06305 Lipopolysaccharide assembly protein A domain LI99_RS31030 PF14864 Alkyl sulfatase C-terminal LI99_RS31030 PF00753 Metallo-beta-lactamase superfamily LI99_RS31030 PF14863 Alkyl sulfatase dimerisation LI99_RS31045 PF01638 HxlR-like helix-turn-helix LI99_RS31085 PF00155 Aminotransferase class I and II LI99_RS31095 PF00378 Enoyl-CoA hydratase/isomerase LI99_RS31100 PF01083 Cutinase LI99_RS31110 PF12833 Helix-turn-helix domain LI99_RS31110 PF01965 DJ-1/PfpI family LI99_RS31135 PF02801 Beta-ketoacyl synthase, C-terminal domain LI99_RS31135 PF00698 Acyl transferase domain LI99_RS31135 PF08240 Alcohol dehydrogenase GroES-like domain LI99_RS31135 PF00109 Beta-ketoacyl synthase, N-terminal domain LI99_RS31135 PF16197 Ketoacyl-synthetase C-terminal extension LI99_RS31135 PF00107 Zinc-binding dehydrogenase LI99_RS31135 PF08659 KR domain LI99_RS31135 PF14765 Polyketide synthase dehydratase LI99_RS31135 PF00550 Phosphopantetheine attachment site LI99_RS31140 PF00266 Aminotransferase class-V LI99_RS31145 PF10759 Protein of unknown function (DUF2587) LI99_RS31150 PF00005 ABC transporter LI99_RS31160 PF01061 ABC-2 type transporter LI99_RS31170 PF02627 Carboxymuconolactone decarboxylase family LI99_RS31175 PF00155 Aminotransferase class I and II LI99_RS31175 PF00392 Bacterial regulatory proteins, gntR family LI99_RS31180 PF04138 GtrA-like protein LI99_RS31185 PF05853 beta-keto acid cleavage enzyme LI99_RS31190 PF02080 TrkA-C domain LI99_RS31190 PF02254 TrkA-N domain LI99_RS31195 PF07690 Major Facilitator Superfamily LI99_RS31200 PF00356 Bacterial regulatory proteins, lacI family LI99_RS31210 PF08450 SMP-30/Gluconolactonase/LRE-like region LI99_RS31225 PF06259 Alpha/beta hydrolase LI99_RS31230 PF01565 FAD binding domain LI99_RS31230 PF04030 D-arabinono-1,4-lactone oxidase LI99_RS31235 PF01475 Ferric uptake regulator family LI99_RS31240 PF00141 Peroxidase LI99_RS31245 PF00106 short chain dehydrogenase LI99_RS31250 PF12250 Arabinofuranosyltransferase N terminal LI99_RS31250 PF12249 Arabinofuranosyltransferase A C terminal LI99_RS31255 PF04602 Mycobacterial cell wall arabinan synthesis protein LI99_RS31255 PF17689 Arabinosyltransferase concanavalin like domain LI99_RS31255 PF14896 EmbC C-terminal domain LI99_RS31260 PF17689 Arabinosyltransferase concanavalin like domain LI99_RS31260 PF04602 Mycobacterial cell wall arabinan synthesis protein LI99_RS31260 PF14896 EmbC C-terminal domain LI99_RS31265 PF04602 Mycobacterial cell wall arabinan synthesis protein LI99_RS31265 PF17689 Arabinosyltransferase concanavalin like domain LI99_RS31265 PF14896 EmbC C-terminal domain LI99_RS31275 PF01039 Carboxyl transferase domain LI99_RS31280 PF00550 Phosphopantetheine attachment site LI99_RS31280 PF00975 Thioesterase domain LI99_RS31280 PF00109 Beta-ketoacyl synthase, N-terminal domain LI99_RS31280 PF02801 Beta-ketoacyl synthase, C-terminal domain LI99_RS31280 PF16197 Ketoacyl-synthetase C-terminal extension LI99_RS31280 PF00698 Acyl transferase domain LI99_RS31285 PF00501 AMP-binding enzyme LI99_RS31290 PF01083 Cutinase LI99_RS31300 PF00756 Putative esterase LI99_RS31310 PF00756 Putative esterase LI99_RS31315 PF00756 Putative esterase LI99_RS31325 PF01040 UbiA prenyltransferase family LI99_RS31330 PF01569 PAP2 superfamily LI99_RS31335 PF17994 Galactofuranosyltransferase 2 N-terminal LI99_RS31340 PF03275 UDP-galactopyranose mutase LI99_RS31345 PF01744 GLTT repeat (6 copies) LI99_RS31360 PF01553 Acyltransferase LI99_RS31365 PF01553 Acyltransferase LI99_RS31370 PF00355 Rieske [2Fe-2S] domain LI99_RS31385 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LI99_RS31385 PF02403 Seryl-tRNA synthetase N-terminal domain LI99_RS31390 PF13845 Septum formation LI99_RS31410 PF01842 ACT domain LI99_RS31410 PF00800 Prephenate dehydratase LI99_RS31435 PF00210 Ferritin-like domain LI99_RS31440 PF03009 Glycerophosphoryl diester phosphodiesterase family LI99_RS31450 PF01206 Sulfurtransferase TusA LI99_RS31450 PF00581 Rhodanese-like domain LI99_RS31460 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LI99_RS31460 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LI99_RS31520 PF03737 Aldolase/RraA LI99_RS31525 PF00743 Flavin-binding monooxygenase-like LI99_RS31530 PF00440 Bacterial regulatory proteins, tetR family LI99_RS31535 PF11799 impB/mucB/samB family C-terminal domain LI99_RS31535 PF00817 impB/mucB/samB family LI99_RS31550 PF14791 DNA polymerase beta thumb LI99_RS31550 PF02811 PHP domain LI99_RS31550 PF14716 Helix-hairpin-helix domain LI99_RS31580 PF01740 STAS domain LI99_RS31580 PF00916 Sulfate permease family LI99_RS31585 PF00171 Aldehyde dehydrogenase family LI99_RS31590 PF00296 Luciferase-like monooxygenase LI99_RS31610 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LI99_RS31610 PF07992 Pyridine nucleotide-disulphide oxidoreductase LI99_RS31615 PF01493 GXGXG motif LI99_RS31615 PF01645 Conserved region in glutamate synthase LI99_RS31615 PF00310 Glutamine amidotransferases class-II LI99_RS31615 PF04898 Glutamate synthase central domain LI99_RS31645 PF00230 Major intrinsic protein LI99_RS31650 PF00210 Ferritin-like domain LI99_RS31670 PF01593 Flavin containing amine oxidoreductase LI99_RS31680 PF04072 Leucine carboxyl methyltransferase LI99_RS31700 PF01625 Peptide methionine sulfoxide reductase LI99_RS31705 PF00067 Cytochrome P450 LI99_RS31715 PF00440 Bacterial regulatory proteins, tetR family LI99_RS31730 PF08241 Methyltransferase domain LI99_RS31735 PF00534 Glycosyl transferases group 1 LI99_RS31735 PF13439 Glycosyltransferase Family 4 LI99_RS31740 PF01243 Pyridoxamine 5'-phosphate oxidase LI99_RS31745 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LI99_RS31760 PF01494 FAD binding domain LI99_RS31765 PF07690 Major Facilitator Superfamily LI99_RS31770 PF00171 Aldehyde dehydrogenase family LI99_RS31785 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS31795 PF00005 ABC transporter LI99_RS31835 PF00440 Bacterial regulatory proteins, tetR family LI99_RS31840 PF00881 Nitroreductase family LI99_RS31845 PF00857 Isochorismatase family LI99_RS31850 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LI99_RS31850 PF00128 Alpha amylase, catalytic domain LI99_RS31860 PF00005 ABC transporter LI99_RS31865 PF01061 ABC-2 type transporter LI99_RS31870 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS31870 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS31870 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS31875 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS31875 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS31875 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS31880 PF07690 Major Facilitator Superfamily LI99_RS31885 PF18085 Maltokinase N-terminal cap domain LI99_RS31885 PF01636 Phosphotransferase enzyme family LI99_RS31890 PF00128 Alpha amylase, catalytic domain LI99_RS31890 PF16657 Maltogenic Amylase, C-terminal domain LI99_RS31915 PF00156 Phosphoribosyl transferase domain LI99_RS31920 PF08402 TOBE domain LI99_RS31920 PF00005 ABC transporter LI99_RS31965 PF00510 Cytochrome c oxidase subunit III LI99_RS31990 PF00679 Elongation factor G C-terminus LI99_RS31990 PF14492 Elongation Factor G, domain II LI99_RS31990 PF03764 Elongation factor G, domain IV LI99_RS31990 PF00009 Elongation factor Tu GTP binding domain LI99_RS31990 PF03144 Elongation factor Tu domain 2 LI99_RS32005 PF00106 short chain dehydrogenase LI99_RS32030 PF07228 Stage II sporulation protein E (SpoIIE) LI99_RS32030 PF00672 HAMP domain LI99_RS32040 PF00300 Histidine phosphatase superfamily (branch 1) LI99_RS32040 PF00934 PE family LI99_RS32045 PF07883 Cupin domain LI99_RS32045 PF12833 Helix-turn-helix domain LI99_RS32055 PF00355 Rieske [2Fe-2S] domain LI99_RS32075 PF00005 ABC transporter LI99_RS32080 PF04954 Siderophore-interacting protein LI99_RS32080 PF08021 Siderophore-interacting FAD-binding domain LI99_RS32080 PF00005 ABC transporter LI99_RS32080 PF00664 ABC transporter transmembrane region LI99_RS32120 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS32120 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS32120 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS32125 PF01370 NAD dependent epimerase/dehydratase family LI99_RS32130 PF16859 Tetracyclin repressor-like, C-terminal domain LI99_RS32130 PF00440 Bacterial regulatory proteins, tetR family LI99_RS32145 PF00196 Bacterial regulatory proteins, luxR family LI99_RS32145 PF17874 MalT-like TPR region LI99_RS32150 PF04261 Dyp-type peroxidase family LI99_RS32150 PF10518 TAT (twin-arginine translocation) pathway signal sequence LI99_RS32155 PF04314 Copper chaperone PCu(A)C LI99_RS32175 PF02720 Domain of unknown function (DUF222) LI99_RS32180 PF08768 Domain of unknown function (DUF1794) LI99_RS32185 PF00144 Beta-lactamase LI99_RS32190 PF01243 Pyridoxamine 5'-phosphate oxidase LI99_RS32195 PF01039 Carboxyl transferase domain LI99_RS32210 PF01638 HxlR-like helix-turn-helix LI99_RS32220 PF00756 Putative esterase LI99_RS32230 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS32230 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS32230 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS32235 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS32235 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS32235 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS32250 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LI99_RS32250 PF04408 Helicase associated domain (HA2) LI99_RS32250 PF00270 DEAD/DEAH box helicase LI99_RS32250 PF00271 Helicase conserved C-terminal domain LI99_RS32250 PF11898 Domain of unknown function (DUF3418) LI99_RS32260 PF13577 SnoaL-like domain LI99_RS32265 PF00106 short chain dehydrogenase LI99_RS32270 PF00266 Aminotransferase class-V LI99_RS32275 PF00005 ABC transporter LI99_RS32280 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS32285 PF00497 Bacterial extracellular solute-binding proteins, family 3 LI99_RS32300 PF00885 6,7-dimethyl-8-ribityllumazine synthase LI99_RS32310 PF00665 Integrase core domain LI99_RS32320 PF00296 Luciferase-like monooxygenase LI99_RS32365 PF07726 ATPase family associated with various cellular activities (AAA) LI99_RS32365 PF17863 AAA lid domain LI99_RS32375 PF00149 Calcineurin-like phosphoesterase LI99_RS32385 PF00107 Zinc-binding dehydrogenase LI99_RS32385 PF13823 Alcohol dehydrogenase GroES-associated LI99_RS32385 PF08240 Alcohol dehydrogenase GroES-like domain LI99_RS32390 PF00271 Helicase conserved C-terminal domain LI99_RS32390 PF00270 DEAD/DEAH box helicase LI99_RS32390 PF17191 RecG wedge domain LI99_RS32395 PF00293 NUDIX domain LI99_RS32410 PF00296 Luciferase-like monooxygenase LI99_RS32415 PF00067 Cytochrome P450 LI99_RS32440 PF01996 F420-0:Gamma-glutamyl ligase LI99_RS32440 PF00881 Nitroreductase family LI99_RS32450 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LI99_RS32460 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG LI99_RS32470 PF06857 Malonate decarboxylase delta subunit (MdcD) LI99_RS32475 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase LI99_RS32480 PF16957 Malonate decarboxylase, alpha subunit, transporter LI99_RS32485 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LI99_RS32485 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LI99_RS32495 PF01717 Cobalamin-independent synthase, Catalytic domain LI99_RS32495 PF08267 Cobalamin-independent synthase, N-terminal domain LI99_RS32505 PF00296 Luciferase-like monooxygenase LI99_RS32510 PF02515 CoA-transferase family III LI99_RS32515 PF03328 HpcH/HpaI aldolase/citrate lyase family LI99_RS32520 PF01381 Helix-turn-helix LI99_RS32520 PF06114 IrrE N-terminal-like domain LI99_RS32520 PF09856 Predicted transcriptional regulator (DUF2083) LI99_RS32525 PF03972 MmgE/PrpD family LI99_RS32535 PF00285 Citrate synthase, C-terminal domain LI99_RS32540 PF02436 Conserved carboxylase domain LI99_RS32540 PF00682 HMGL-like LI99_RS32540 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LI99_RS32540 PF00364 Biotin-requiring enzyme LI99_RS32540 PF00289 Biotin carboxylase, N-terminal domain LI99_RS32540 PF02785 Biotin carboxylase C-terminal domain LI99_RS32585 PF16957 Malonate decarboxylase, alpha subunit, transporter LI99_RS32590 PF12697 Alpha/beta hydrolase family LI99_RS32615 PF08241 Methyltransferase domain LI99_RS32645 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS32650 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS32655 PF00005 ABC transporter LI99_RS32655 PF08402 TOBE domain LI99_RS32665 PF01425 Amidase LI99_RS32670 PF03466 LysR substrate binding domain LI99_RS32670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI99_RS32690 PF03466 LysR substrate binding domain LI99_RS32690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI99_RS32695 PF00753 Metallo-beta-lactamase superfamily LI99_RS32725 PF00202 Aminotransferase class-III LI99_RS32730 PF02770 Acyl-CoA dehydrogenase, middle domain LI99_RS32730 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI99_RS32730 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI99_RS32735 PF00171 Aldehyde dehydrogenase family LI99_RS32740 PF02515 CoA-transferase family III LI99_RS32745 PF07905 Purine catabolism regulatory protein-like family LI99_RS32745 PF13556 PucR C-terminal helix-turn-helix domain LI99_RS32750 PF07722 Peptidase C26 LI99_RS32755 PF07722 Peptidase C26 LI99_RS32760 PF00497 Bacterial extracellular solute-binding proteins, family 3 LI99_RS32765 PF00120 Glutamine synthetase, catalytic domain LI99_RS32775 PF00067 Cytochrome P450 LI99_RS32795 PF07729 FCD domain LI99_RS32795 PF00392 Bacterial regulatory proteins, gntR family LI99_RS32800 PF13520 Amino acid permease LI99_RS32805 PF00171 Aldehyde dehydrogenase family LI99_RS32810 PF00296 Luciferase-like monooxygenase LI99_RS32815 PF01614 Bacterial transcriptional regulator LI99_RS32815 PF09339 IclR helix-turn-helix domain LI99_RS32820 PF01488 Shikimate / quinate 5-dehydrogenase LI99_RS32820 PF08501 Shikimate dehydrogenase substrate binding domain LI99_RS32820 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LI99_RS32830 PF00561 alpha/beta hydrolase fold LI99_RS32845 PF07690 Major Facilitator Superfamily LI99_RS32850 PF00465 Iron-containing alcohol dehydrogenase LI99_RS32855 PF04444 Catechol dioxygenase N terminus LI99_RS32855 PF00775 Dioxygenase LI99_RS32875 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LI99_RS32875 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LI99_RS32880 PF07690 Major Facilitator Superfamily LI99_RS32885 PF00561 alpha/beta hydrolase fold LI99_RS32895 PF09995 Uncharacterized protein conserved in bacteria (DUF2236) LI99_RS32910 PF00005 ABC transporter LI99_RS32915 PF09819 ABC-type cobalt transport system, permease component LI99_RS32930 PF00248 Aldo/keto reductase family LI99_RS32950 PF00795 Carbon-nitrogen hydrolase LI99_RS32955 PF00296 Luciferase-like monooxygenase LI99_RS32965 PF00356 Bacterial regulatory proteins, lacI family LI99_RS32975 PF00392 Bacterial regulatory proteins, gntR family LI99_RS32975 PF07729 FCD domain LI99_RS32985 PF00291 Pyridoxal-phosphate dependent enzyme LI99_RS33010 PF00392 Bacterial regulatory proteins, gntR family LI99_RS33010 PF07702 UTRA domain LI99_RS33015 PF00248 Aldo/keto reductase family LI99_RS33020 PF00109 Beta-ketoacyl synthase, N-terminal domain LI99_RS33020 PF02801 Beta-ketoacyl synthase, C-terminal domain LI99_RS33020 PF08659 KR domain LI99_RS33020 PF08990 Erythronolide synthase docking LI99_RS33020 PF00698 Acyl transferase domain LI99_RS33020 PF16197 Ketoacyl-synthetase C-terminal extension LI99_RS33020 PF14765 Polyketide synthase dehydratase LI99_RS33020 PF00550 Phosphopantetheine attachment site LI99_RS33020 PF08240 Alcohol dehydrogenase GroES-like domain LI99_RS33025 PF12848 ABC transporter LI99_RS33025 PF16326 ABC transporter C-terminal domain LI99_RS33025 PF00005 ABC transporter LI99_RS33045 PF01341 Glycosyl hydrolases family 6 LI99_RS33045 PF00553 Cellulose binding domain LI99_RS33055 PF13452 N-terminal half of MaoC dehydratase LI99_RS33065 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LI99_RS33065 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LI99_RS33070 PF09339 IclR helix-turn-helix domain LI99_RS33070 PF01614 Bacterial transcriptional regulator LI99_RS33075 PF00230 Major intrinsic protein LI99_RS33080 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LI99_RS33080 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LI99_RS33085 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LI99_RS33085 PF01266 FAD dependent oxidoreductase LI99_RS33100 PF00561 alpha/beta hydrolase fold LI99_RS33105 PF00440 Bacterial regulatory proteins, tetR family LI99_RS33115 PF00005 ABC transporter LI99_RS33120 PF00550 Phosphopantetheine attachment site LI99_RS33120 PF00109 Beta-ketoacyl synthase, N-terminal domain LI99_RS33120 PF16197 Ketoacyl-synthetase C-terminal extension LI99_RS33120 PF14765 Polyketide synthase dehydratase LI99_RS33120 PF00698 Acyl transferase domain LI99_RS33120 PF08659 KR domain LI99_RS33120 PF02801 Beta-ketoacyl synthase, C-terminal domain LI99_RS33130 PF00999 Sodium/hydrogen exchanger family LI99_RS33145 PF00561 alpha/beta hydrolase fold LI99_RS33150 PF02515 CoA-transferase family III LI99_RS33155 PF00378 Enoyl-CoA hydratase/isomerase LI99_RS33160 PF00083 Sugar (and other) transporter LI99_RS33165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI99_RS33165 PF03466 LysR substrate binding domain LI99_RS33170 PF00378 Enoyl-CoA hydratase/isomerase LI99_RS33185 PF02567 Phenazine biosynthesis-like protein LI99_RS33205 PF00144 Beta-lactamase LI99_RS33215 PF00121 Triosephosphate isomerase LI99_RS33220 PF02502 Ribose/Galactose Isomerase LI99_RS33225 PF02734 DAK2 domain LI99_RS33225 PF02733 Dak1 domain LI99_RS33230 PF00392 Bacterial regulatory proteins, gntR family LI99_RS33230 PF07729 FCD domain LI99_RS33240 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LI99_RS33240 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LI99_RS33245 PF02447 GntP family permease LI99_RS33260 PF00378 Enoyl-CoA hydratase/isomerase LI99_RS33280 PF00356 Bacterial regulatory proteins, lacI family LI99_RS33290 PF00294 pfkB family carbohydrate kinase LI99_RS33295 PF00005 ABC transporter LI99_RS33300 PF02653 Branched-chain amino acid transport system / permease component LI99_RS33305 PF13407 Periplasmic binding protein domain LI99_RS33310 PF00144 Beta-lactamase LI99_RS33315 PF17755 UvrA DNA-binding domain LI99_RS33320 PF00440 Bacterial regulatory proteins, tetR family LI99_RS33330 PF07728 AAA domain (dynein-related subfamily) LI99_RS33330 PF08406 CbbQ/NirQ/NorQ C-terminal LI99_RS33365 PF00384 Molybdopterin oxidoreductase LI99_RS33365 PF01568 Molydopterin dinucleotide binding domain LI99_RS33365 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LI99_RS33375 PF07992 Pyridine nucleotide-disulphide oxidoreductase LI99_RS33375 PF18113 Rubredoxin binding C-terminal domain LI99_RS33385 PF01975 Survival protein SurE LI99_RS33390 PF00877 NlpC/P60 family LI99_RS33415 PF02652 L-lactate permease LI99_RS33440 PF12697 Alpha/beta hydrolase family LI99_RS33450 PF08240 Alcohol dehydrogenase GroES-like domain LI99_RS33450 PF00107 Zinc-binding dehydrogenase LI99_RS33455 PF00107 Zinc-binding dehydrogenase LI99_RS33455 PF08240 Alcohol dehydrogenase GroES-like domain LI99_RS33460 PF00487 Fatty acid desaturase LI99_RS33475 PF00561 alpha/beta hydrolase fold LI99_RS33480 PF01965 DJ-1/PfpI family LI99_RS33480 PF12833 Helix-turn-helix domain LI99_RS33490 PF00202 Aminotransferase class-III LI99_RS33495 PF01370 NAD dependent epimerase/dehydratase family LI99_RS33500 PF03480 Bacterial extracellular solute-binding protein, family 7 LI99_RS33505 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LI99_RS33520 PF01243 Pyridoxamine 5'-phosphate oxidase LI99_RS33525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI99_RS33525 PF03466 LysR substrate binding domain LI99_RS33530 PF00561 alpha/beta hydrolase fold LI99_RS33535 PF07859 alpha/beta hydrolase fold LI99_RS33545 PF00694 Aconitase C-terminal domain LI99_RS33550 PF00330 Aconitase family (aconitate hydratase) LI99_RS33560 PF03972 MmgE/PrpD family LI99_RS33565 PF09339 IclR helix-turn-helix domain LI99_RS33565 PF01614 Bacterial transcriptional regulator LI99_RS33570 PF06441 Epoxide hydrolase N terminus LI99_RS33575 PF00106 short chain dehydrogenase LI99_RS33595 PF00596 Class II Aldolase and Adducin N-terminal domain LI99_RS33605 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LI99_RS33610 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS33615 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS33615 PF12911 N-terminal TM domain of oligopeptide transport permease C LI99_RS33620 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LI99_RS33620 PF00005 ABC transporter LI99_RS33625 PF00005 ABC transporter LI99_RS33625 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LI99_RS33630 PF00480 ROK family LI99_RS33635 PF02633 Creatinine amidohydrolase LI99_RS33640 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LI99_RS33640 PF13378 Enolase C-terminal domain-like LI99_RS33645 PF00144 Beta-lactamase LI99_RS33655 PF00171 Aldehyde dehydrogenase family LI99_RS33665 PF00005 ABC transporter LI99_RS33670 PF12399 Branched-chain amino acid ATP-binding cassette transporter LI99_RS33670 PF00005 ABC transporter LI99_RS33680 PF02653 Branched-chain amino acid transport system / permease component LI99_RS33700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI99_RS33710 PF00296 Luciferase-like monooxygenase LI99_RS33715 PF01638 HxlR-like helix-turn-helix LI99_RS33720 PF01979 Amidohydrolase family LI99_RS33740 PF14528 LAGLIDADG-like domain LI99_RS33740 PF00772 DnaB-like helicase N terminal domain LI99_RS33740 PF03796 DnaB-like helicase C terminal domain LI99_RS33750 PF03948 Ribosomal protein L9, C-terminal domain LI99_RS33750 PF01281 Ribosomal protein L9, N-terminal domain LI99_RS33755 PF01084 Ribosomal protein S18 LI99_RS33760 PF00436 Single-strand binding protein family LI99_RS33765 PF01250 Ribosomal protein S6 LI99_RS33780 PF00912 Transglycosylase LI99_RS33780 PF00905 Penicillin binding protein transpeptidase domain LI99_RS33785 PF17249 Family of unknown function (DUF5318) LI99_RS33790 PF08044 Domain of unknown function (DUF1707) LI99_RS33800 PF01658 Myo-inositol-1-phosphate synthase LI99_RS33805 PF12697 Alpha/beta hydrolase family LI99_RS33810 PF00296 Luciferase-like monooxygenase LI99_RS33815 PF00392 Bacterial regulatory proteins, gntR family LI99_RS33820 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS33825 PF00005 ABC transporter LI99_RS33840 PF00106 short chain dehydrogenase LI99_RS33845 PF08264 Anticodon-binding domain of tRNA LI99_RS33845 PF13603 Leucyl-tRNA synthetase, Domain 2 LI99_RS33845 PF09334 tRNA synthetases class I (M) LI99_RS33850 PF10738 Probable lipoprotein LpqN LI99_RS33860 PF02622 Uncharacterized ACR, COG1678 LI99_RS33865 PF07690 Major Facilitator Superfamily LI99_RS33870 PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain LI99_RS33870 PF08608 Wyosine base formation LI99_RS33880 PF01743 Poly A polymerase head domain LI99_RS33880 PF12627 Probable RNA and SrmB- binding site of polymerase A LI99_RS33880 PF01966 HD domain LI99_RS33885 PF00293 NUDIX domain LI99_RS33895 PF03023 Lipid II flippase MurJ LI99_RS33900 PF04542 Sigma-70 region 2 LI99_RS33900 PF08281 Sigma-70, region 4 LI99_RS33910 PF07992 Pyridine nucleotide-disulphide oxidoreductase LI99_RS33915 PF00085 Thioredoxin LI99_RS33920 PF01471 Putative peptidoglycan binding domain LI99_RS33920 PF01520 N-acetylmuramoyl-L-alanine amidase LI99_RS33930 PF17762 HTH domain found in ParB protein LI99_RS33930 PF02195 ParB-like nuclease domain LI99_RS33935 PF13614 AAA domain LI99_RS33940 PF02527 rRNA small subunit methyltransferase G LI99_RS33950 PF02096 60Kd inner membrane protein LI99_RS33955 PF01809 Putative membrane protein insertion efficiency factor LI99_RS33960 PF00825 Ribonuclease P LI99_RS33965 PF00468 Ribosomal protein L34 LI99_RS33970 PF00308 Bacterial dnaA protein LI99_RS33970 PF08299 Bacterial dnaA protein helix-turn-helix LI99_RS34010 PF00067 Cytochrome P450 LI99_RS34015 PF00067 Cytochrome P450 LI99_RS34035 PF14528 LAGLIDADG-like domain LI99_RS34035 PF03796 DnaB-like helicase C terminal domain LI99_RS34035 PF00772 DnaB-like helicase N terminal domain LI99_RS34040 PF07690 Major Facilitator Superfamily LI99_RS34305 PF13276 HTH-like domain LI99_RS34305 PF00665 Integrase core domain LI99_RS34425 PF04229 GrpB protein LI99_RS34430 PF00872 Transposase, Mutator family LI99_RS34440 PF01541 GIY-YIG catalytic domain LI99_RS34440 PF00929 Exonuclease LI99_RS34540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI99_RS34540 PF03466 LysR substrate binding domain LI99_RS34570 PF00528 Binding-protein-dependent transport system inner membrane component LI99_RS34585 PF03816 Cell envelope-related transcriptional attenuator domain