locus-tag class description CCD81_RS00010 PF11638 DnaA N-terminal domain CCD81_RS00010 PF08299 Bacterial dnaA protein helix-turn-helix CCD81_RS00010 PF00308 Bacterial dnaA protein CCD81_RS00015 PF00712 DNA polymerase III beta subunit, N-terminal domain CCD81_RS00015 PF02768 DNA polymerase III beta subunit, C-terminal domain CCD81_RS00015 PF02767 DNA polymerase III beta subunit, central domain CCD81_RS00025 PF13089 Polyphosphate kinase N-terminal domain CCD81_RS00025 PF17941 Polyphosphate kinase C-terminal domain 1 CCD81_RS00025 PF13090 Polyphosphate kinase C-terminal domain 2 CCD81_RS00025 PF02503 Polyphosphate kinase middle domain CCD81_RS00045 PF08264 Anticodon-binding domain of tRNA CCD81_RS00045 PF09334 tRNA synthetases class I (M) CCD81_RS00045 PF00133 tRNA synthetases class I (I, L, M and V) CCD81_RS00045 PF13603 Leucyl-tRNA synthetase, Domain 2 CCD81_RS00050 PF02086 D12 class N6 adenine-specific DNA methyltransferase CCD81_RS00055 PF01555 DNA methylase CCD81_RS00100 PF00121 Triosephosphate isomerase CCD81_RS00105 PF13185 GAF domain CCD81_RS00115 PF00581 Rhodanese-like domain CCD81_RS00130 PF07715 TonB-dependent Receptor Plug Domain CCD81_RS00130 PF00593 TonB dependent receptor CCD81_RS00155 PF14525 AraC-binding-like domain CCD81_RS00155 PF12833 Helix-turn-helix domain CCD81_RS00160 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CCD81_RS00160 PF00326 Prolyl oligopeptidase family CCD81_RS00165 PF00696 Amino acid kinase family CCD81_RS00165 PF00583 Acetyltransferase (GNAT) family CCD81_RS00175 PF00156 Phosphoribosyl transferase domain CCD81_RS00190 PF00814 Glycoprotease family CCD81_RS00200 PF01116 Fructose-bisphosphate aldolase class-II CCD81_RS00205 PF00589 Phage integrase family CCD81_RS00205 PF02899 Phage integrase, N-terminal SAM-like domain CCD81_RS00210 PF02780 Transketolase, C-terminal domain CCD81_RS00210 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CCD81_RS00210 PF02779 Transketolase, pyrimidine binding domain CCD81_RS00215 PF01938 TRAM domain CCD81_RS00215 PF00919 Uncharacterized protein family UPF0004 CCD81_RS00215 PF04055 Radical SAM superfamily CCD81_RS00230 PF00202 Aminotransferase class-III CCD81_RS00245 PF00929 Exonuclease CCD81_RS00255 PF02785 Biotin carboxylase C-terminal domain CCD81_RS00255 PF00289 Biotin carboxylase, N-terminal domain CCD81_RS00255 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CCD81_RS00260 PF00364 Biotin-requiring enzyme CCD81_RS00270 PF02547 Queuosine biosynthesis protein CCD81_RS00280 PF02525 Flavodoxin-like fold CCD81_RS00290 PF03466 LysR substrate binding domain CCD81_RS00290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCD81_RS00295 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CCD81_RS00295 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CCD81_RS00295 PF02142 MGS-like domain CCD81_RS00310 PF04480 Protein of unknown function (DUF559) CCD81_RS00320 PF00117 Glutamine amidotransferase class-I CCD81_RS00320 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CCD81_RS00335 PF05567 Neisseria PilC beta-propeller domain CCD81_RS00355 PF10609 NUBPL iron-transfer P-loop NTPase CCD81_RS00365 PF00578 AhpC/TSA family CCD81_RS00375 PF01047 MarR family CCD81_RS00380 PF01613 Flavin reductase like domain CCD81_RS00385 PF00483 Nucleotidyl transferase CCD81_RS00390 PF00892 EamA-like transporter family CCD81_RS00395 PF01268 Formate--tetrahydrofolate ligase CCD81_RS00400 PF06071 Protein of unknown function (DUF933) CCD81_RS00400 PF01926 50S ribosome-binding GTPase CCD81_RS00415 PF00579 tRNA synthetases class I (W and Y) CCD81_RS00420 PF01687 Riboflavin kinase CCD81_RS00420 PF06574 FAD synthetase CCD81_RS00425 PF08264 Anticodon-binding domain of tRNA CCD81_RS00425 PF06827 Zinc finger found in FPG and IleRS CCD81_RS00425 PF00133 tRNA synthetases class I (I, L, M and V) CCD81_RS00435 PF01252 Signal peptidase (SPase) II CCD81_RS00440 PF02401 LytB protein CCD81_RS00445 PF13419 Haloacid dehalogenase-like hydrolase CCD81_RS00450 PF01609 Transposase DDE domain CCD81_RS00455 PF09827 CRISPR associated protein Cas2 CCD81_RS00460 PF01867 CRISPR associated protein Cas1 CCD81_RS00465 PF18541 RuvC endonuclease subdomain 3 CCD81_RS00465 PF13395 HNH endonuclease CCD81_RS00470 PF07733 Bacterial DNA polymerase III alpha NTPase domain CCD81_RS00470 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CCD81_RS00470 PF02811 PHP domain CCD81_RS00470 PF14579 Helix-hairpin-helix motif CCD81_RS00470 PF01336 OB-fold nucleic acid binding domain CCD81_RS00495 PF02811 PHP domain CCD81_RS00500 PF00155 Aminotransferase class I and II CCD81_RS00505 PF02719 Polysaccharide biosynthesis protein CCD81_RS00510 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CCD81_RS00530 PF13477 Glycosyl transferase 4-like CCD81_RS00530 PF00534 Glycosyl transferases group 1 CCD81_RS00545 PF01872 RibD C-terminal domain CCD81_RS00545 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CCD81_RS00550 PF03477 ATP cone domain CCD81_RS00555 PF13230 Glutamine amidotransferases class-II CCD81_RS00565 PF01761 3-dehydroquinate synthase CCD81_RS00575 PF01202 Shikimate kinase CCD81_RS00590 PF00263 Bacterial type II and III secretion system protein CCD81_RS00590 PF03958 Bacterial type II/III secretion system short domain CCD81_RS00590 PF07660 Secretin and TonB N terminus short domain CCD81_RS00590 PF11741 AMIN domain CCD81_RS00600 PF04350 Pilus assembly protein, PilO CCD81_RS00615 PF00905 Penicillin binding protein transpeptidase domain CCD81_RS00615 PF17092 Penicillin-binding protein OB-like domain CCD81_RS00615 PF00912 Transglycosylase CCD81_RS00620 PF01926 50S ribosome-binding GTPase CCD81_RS00625 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CCD81_RS00630 PF05140 ResB-like family CCD81_RS00635 PF01578 Cytochrome C assembly protein CCD81_RS00640 PF00814 Glycoprotease family CCD81_RS00650 PF00438 S-adenosylmethionine synthetase, N-terminal domain CCD81_RS00650 PF02772 S-adenosylmethionine synthetase, central domain CCD81_RS00650 PF02773 S-adenosylmethionine synthetase, C-terminal domain CCD81_RS00660 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CCD81_RS00665 PF03358 NADPH-dependent FMN reductase CCD81_RS00675 PF03600 Citrate transporter CCD81_RS00685 PF00512 His Kinase A (phospho-acceptor) domain CCD81_RS00685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCD81_RS00690 PF00575 S1 RNA binding domain CCD81_RS00690 PF10150 Ribonuclease E/G family CCD81_RS00695 PF00462 Glutaredoxin CCD81_RS00700 PF02556 Preprotein translocase subunit SecB CCD81_RS00705 PF00270 DEAD/DEAH box helicase CCD81_RS00705 PF00271 Helicase conserved C-terminal domain CCD81_RS00705 PF17191 RecG wedge domain CCD81_RS00715 PF01118 Semialdehyde dehydrogenase, NAD binding domain CCD81_RS00715 PF02774 Semialdehyde dehydrogenase, dimerisation domain CCD81_RS00720 PF03631 Virulence factor BrkB CCD81_RS00775 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CCD81_RS00775 PF17287 POTRA domain CCD81_RS00775 PF08479 POTRA domain, ShlB-type CCD81_RS00780 PF05860 haemagglutination activity domain CCD81_RS00780 PF05860 haemagglutination activity domain CCD81_RS00780 PF13332 Hemagglutinin repeat CCD81_RS00780 PF04829 Pre-toxin domain with VENN motif CCD81_RS00780 PF04829 Pre-toxin domain with VENN motif CCD81_RS00780 PF13332 Hemagglutinin repeat CCD81_RS00825 PF01609 Transposase DDE domain CCD81_RS00850 PF00005 ABC transporter CCD81_RS00850 PF00664 ABC transporter transmembrane region CCD81_RS00850 PF03412 Peptidase C39 family CCD81_RS00855 PF03631 Virulence factor BrkB CCD81_RS00865 PF06508 Queuosine biosynthesis protein QueC CCD81_RS00875 PF01242 6-pyruvoyl tetrahydropterin synthase CCD81_RS00885 PF06993 Protein of unknown function (DUF1304) CCD81_RS00890 PF04055 Radical SAM superfamily CCD81_RS00900 PF00933 Glycosyl hydrolase family 3 N terminal domain CCD81_RS00905 PF03553 Na+/H+ antiporter family CCD81_RS00915 PF13180 PDZ domain CCD81_RS00920 PF00633 Helix-hairpin-helix motif CCD81_RS00920 PF10576 Iron-sulfur binding domain of endonuclease III CCD81_RS00920 PF00730 HhH-GPD superfamily base excision DNA repair protein CCD81_RS00940 PF07690 Major Facilitator Superfamily CCD81_RS00945 PF03553 Na+/H+ antiporter family CCD81_RS00950 PF00571 CBS domain CCD81_RS00950 PF03471 Transporter associated domain CCD81_RS00955 PF02130 Uncharacterized protein family UPF0054 CCD81_RS00960 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CCD81_RS00960 PF03900 Porphobilinogen deaminase, C-terminal domain CCD81_RS00965 PF00155 Aminotransferase class I and II CCD81_RS00980 PF02652 L-lactate permease CCD81_RS00985 PF12850 Calcineurin-like phosphoesterase superfamily domain CCD81_RS01000 PF02463 RecF/RecN/SMC N terminal domain CCD81_RS01000 PF06470 SMC proteins Flexible Hinge Domain CCD81_RS01010 PF08240 Alcohol dehydrogenase GroES-like domain CCD81_RS01010 PF00107 Zinc-binding dehydrogenase CCD81_RS01015 PF07963 Prokaryotic N-terminal methylation motif CCD81_RS01015 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor CCD81_RS01020 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CCD81_RS01025 PF02687 FtsX-like permease family CCD81_RS01025 PF12704 MacB-like periplasmic core domain CCD81_RS01025 PF00005 ABC transporter CCD81_RS01030 PF13098 Thioredoxin-like domain CCD81_RS01030 PF10411 Disulfide bond isomerase protein N-terminus CCD81_RS01035 PF17764 3′ DNA-binding domain (3′BD) CCD81_RS01035 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CCD81_RS01035 PF00271 Helicase conserved C-terminal domain CCD81_RS01035 PF00270 DEAD/DEAH box helicase CCD81_RS01035 PF18074 Primosomal protein N C-terminal domain CCD81_RS01050 PF01609 Transposase DDE domain CCD81_RS01065 PF00012 Hsp70 protein CCD81_RS01080 PF01521 Iron-sulphur cluster biosynthesis CCD81_RS01090 PF03109 ABC1 family CCD81_RS01095 PF00132 Bacterial transferase hexapeptide (six repeats) CCD81_RS01095 PF06426 Serine acetyltransferase, N-terminal CCD81_RS01100 PF01025 GrpE CCD81_RS01105 PF04400 (Na+)-NQR maturation NqrM CCD81_RS01110 PF02424 ApbE family CCD81_RS01115 PF00111 2Fe-2S iron-sulfur cluster binding domain CCD81_RS01115 PF00175 Oxidoreductase NAD-binding domain CCD81_RS01115 PF00970 Oxidoreductase FAD-binding domain CCD81_RS01120 PF02508 Rnf-Nqr subunit, membrane protein CCD81_RS01125 PF02508 Rnf-Nqr subunit, membrane protein CCD81_RS01130 PF04205 FMN-binding domain CCD81_RS01135 PF03116 NQR2, RnfD, RnfE family CCD81_RS01140 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) CCD81_RS01140 PF11973 NQRA C-terminal domain CCD81_RS01155 PF04304 Protein of unknown function (DUF454) CCD81_RS01165 PF01037 Lrp/AsnC ligand binding domain CCD81_RS01175 PF01571 Aminomethyltransferase folate-binding domain CCD81_RS01175 PF08669 Glycine cleavage T-protein C-terminal barrel domain CCD81_RS01180 PF01597 Glycine cleavage H-protein CCD81_RS01185 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CCD81_RS01185 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CCD81_RS01185 PF01488 Shikimate / quinate 5-dehydrogenase CCD81_RS01205 PF00005 ABC transporter CCD81_RS01210 PF01609 Transposase DDE domain CCD81_RS01215 PF05573 NosL CCD81_RS01235 PF00664 ABC transporter transmembrane region CCD81_RS01235 PF00005 ABC transporter CCD81_RS01235 PF03412 Peptidase C39 family CCD81_RS01245 PF06594 Haemolysin-type calcium binding protein related domain CCD81_RS01245 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) CCD81_RS01250 PF06594 Haemolysin-type calcium binding protein related domain CCD81_RS01250 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) CCD81_RS01255 PF06594 Haemolysin-type calcium binding protein related domain CCD81_RS01255 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) CCD81_RS01265 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) CCD81_RS01265 PF06594 Haemolysin-type calcium binding protein related domain CCD81_RS01290 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) CCD81_RS01290 PF06594 Haemolysin-type calcium binding protein related domain CCD81_RS01295 PF01297 Zinc-uptake complex component A periplasmic CCD81_RS01300 PF00950 ABC 3 transport family CCD81_RS01305 PF00005 ABC transporter CCD81_RS01310 PF01245 Ribosomal protein L19 CCD81_RS01315 PF01746 tRNA (Guanine-1)-methyltransferase CCD81_RS01320 PF01782 RimM N-terminal domain CCD81_RS01320 PF05239 PRC-barrel domain CCD81_RS01325 PF00886 Ribosomal protein S16 CCD81_RS01335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCD81_RS01335 PF00512 His Kinase A (phospho-acceptor) domain CCD81_RS01335 PF00672 HAMP domain CCD81_RS01335 PF16527 Two-component sensor protein CpxA, periplasmic domain CCD81_RS01340 PF00072 Response regulator receiver domain CCD81_RS01340 PF00486 Transcriptional regulatory protein, C terminal CCD81_RS01355 PF02545 Maf-like protein CCD81_RS01360 PF00902 Sec-independent protein translocase protein (TatC) CCD81_RS01365 PF02416 mttA/Hcf106 family CCD81_RS01370 PF02416 mttA/Hcf106 family CCD81_RS01380 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CCD81_RS01385 PF00107 Zinc-binding dehydrogenase CCD81_RS01385 PF08240 Alcohol dehydrogenase GroES-like domain CCD81_RS01390 PF00850 Histone deacetylase domain CCD81_RS01395 PF02699 Preprotein translocase subunit CCD81_RS01400 PF02355 Protein export membrane protein CCD81_RS01400 PF13721 SecD export protein N-terminal TM region CCD81_RS01400 PF07549 SecD/SecF GG Motif CCD81_RS01405 PF07549 SecD/SecF GG Motif CCD81_RS01405 PF02355 Protein export membrane protein CCD81_RS01410 PF00312 Ribosomal protein S15 CCD81_RS01420 PF08402 TOBE domain CCD81_RS01420 PF00005 ABC transporter CCD81_RS01425 PF00528 Binding-protein-dependent transport system inner membrane component CCD81_RS01430 PF00528 Binding-protein-dependent transport system inner membrane component CCD81_RS01440 PF01266 FAD dependent oxidoreductase CCD81_RS01450 PF00909 Ammonium Transporter Family CCD81_RS01475 PF12762 ISXO2-like transposase domain CCD81_RS01480 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CCD81_RS01480 PF07497 Rho termination factor, RNA-binding domain CCD81_RS01480 PF07498 Rho termination factor, N-terminal domain CCD81_RS01485 PF00391 PEP-utilising enzyme, mobile domain CCD81_RS01485 PF02896 PEP-utilising enzyme, TIM barrel domain CCD81_RS01485 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CCD81_RS01495 PF03618 Kinase/pyrophosphorylase CCD81_RS01500 PF13419 Haloacid dehalogenase-like hydrolase CCD81_RS01505 PF01545 Cation efflux family CCD81_RS01505 PF16916 Dimerisation domain of Zinc Transporter CCD81_RS01510 PF04305 Protein of unknown function (DUF455) CCD81_RS01520 PF03548 Outer membrane lipoprotein carrier protein LolA CCD81_RS01530 PF13416 Bacterial extracellular solute-binding protein CCD81_RS01535 PF00535 Glycosyl transferase family 2 CCD81_RS01540 PF00132 Bacterial transferase hexapeptide (six repeats) CCD81_RS01555 PF00009 Elongation factor Tu GTP binding domain CCD81_RS01555 PF16658 Class II release factor RF3, C-terminal domain CCD81_RS01555 PF03144 Elongation factor Tu domain 2 CCD81_RS01560 PF01502 Phosphoribosyl-AMP cyclohydrolase CCD81_RS01565 PF00977 Histidine biosynthesis protein CCD81_RS01570 PF00977 Histidine biosynthesis protein CCD81_RS01575 PF00117 Glutamine amidotransferase class-I CCD81_RS01580 PF01515 Phosphate acetyl/butaryl transferase CCD81_RS01580 PF07085 DRTGG domain CCD81_RS01585 PF00005 ABC transporter CCD81_RS01585 PF17845 FbpC C-terminal regulatory nucleotide binding domain CCD81_RS01590 PF00528 Binding-protein-dependent transport system inner membrane component CCD81_RS01595 PF01547 Bacterial extracellular solute-binding protein CCD81_RS01610 PF14698 Argininosuccinate lyase C-terminal CCD81_RS01610 PF00206 Lyase CCD81_RS01615 PF00483 Nucleotidyl transferase CCD81_RS01620 PF01725 Ham1 family CCD81_RS01630 PF00719 Inorganic pyrophosphatase CCD81_RS01635 PF00293 NUDIX domain CCD81_RS01695 PF02386 Cation transport protein CCD81_RS01700 PF00149 Calcineurin-like phosphoesterase CCD81_RS01705 PF01042 Endoribonuclease L-PSP CCD81_RS01710 PF02462 Opacity family porin protein CCD81_RS01725 PF04055 Radical SAM superfamily CCD81_RS01725 PF06969 HemN C-terminal domain CCD81_RS01730 PF12826 Helix-hairpin-helix motif CCD81_RS01730 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CCD81_RS01730 PF03120 NAD-dependent DNA ligase OB-fold domain CCD81_RS01730 PF01653 NAD-dependent DNA ligase adenylation domain CCD81_RS01730 PF00533 BRCA1 C Terminus (BRCT) domain CCD81_RS01745 PF01510 N-acetylmuramoyl-L-alanine amidase CCD81_RS01750 PF02618 YceG-like family CCD81_RS01755 PF02223 Thymidylate kinase CCD81_RS01760 PF00390 Malic enzyme, N-terminal domain CCD81_RS01760 PF01515 Phosphate acetyl/butaryl transferase CCD81_RS01760 PF03949 Malic enzyme, NAD binding domain CCD81_RS01775 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CCD81_RS01785 PF03966 Trm112p-like protein CCD81_RS01790 PF02348 Cytidylyltransferase CCD81_RS01810 PF00290 Tryptophan synthase alpha chain CCD81_RS01815 PF01039 Carboxyl transferase domain CCD81_RS01815 PF17848 Acetyl-coA carboxylase zinc finger domain CCD81_RS01825 PF01206 Sulfurtransferase TusA CCD81_RS01835 PF01979 Amidohydrolase family CCD81_RS01840 PF01029 NusB family CCD81_RS01845 PF00885 6,7-dimethyl-8-ribityllumazine synthase CCD81_RS01860 PF14622 Ribonuclease-III-like CCD81_RS01860 PF00035 Double-stranded RNA binding motif CCD81_RS01865 PF07650 KH domain CCD81_RS01865 PF01926 50S ribosome-binding GTPase CCD81_RS01875 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CCD81_RS01880 PF03449 Transcription elongation factor, N-terminal CCD81_RS01880 PF01272 Transcription elongation factor, GreA/GreB, C-term CCD81_RS01885 PF00156 Phosphoribosyl transferase domain CCD81_RS01900 PF08245 Mur ligase middle domain CCD81_RS01900 PF02875 Mur ligase family, glutamate ligase domain CCD81_RS01915 PF00005 ABC transporter CCD81_RS01920 PF00398 Ribosomal RNA adenine dimethylase CCD81_RS01935 PF00291 Pyridoxal-phosphate dependent enzyme CCD81_RS01945 PF03212 Pertactin CCD81_RS01945 PF02395 Immunoglobulin A1 protease CCD81_RS01945 PF03797 Autotransporter beta-domain CCD81_RS01955 PF00753 Metallo-beta-lactamase superfamily CCD81_RS01955 PF03772 Competence protein CCD81_RS01960 PF13525 Outer membrane lipoprotein CCD81_RS01965 PF01479 S4 domain CCD81_RS01965 PF00849 RNA pseudouridylate synthase CCD81_RS01970 PF01758 Sodium Bile acid symporter family CCD81_RS01985 PF02578 Multi-copper polyphenol oxidoreductase laccase CCD81_RS01990 PF04390 Lipopolysaccharide-assembly CCD81_RS01995 PF06144 DNA polymerase III, delta subunit CCD81_RS01995 PF14840 Processivity clamp loader gamma complex DNA pol III C-term CCD81_RS02010 PF03755 YicC-like family, N-terminal region CCD81_RS02010 PF08340 Domain of unknown function (DUF1732) CCD81_RS02015 PF04545 Sigma-70, region 4 CCD81_RS02015 PF04542 Sigma-70 region 2 CCD81_RS02015 PF00140 Sigma-70 factor, region 1.2 CCD81_RS02025 PF00795 Carbon-nitrogen hydrolase CCD81_RS02055 PF00762 Ferrochelatase CCD81_RS02060 PF01702 Queuine tRNA-ribosyltransferase CCD81_RS02070 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CCD81_RS02070 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CCD81_RS02070 PF03129 Anticodon binding domain CCD81_RS02070 PF02824 TGS domain CCD81_RS02075 PF00707 Translation initiation factor IF-3, C-terminal domain CCD81_RS02075 PF05198 Translation initiation factor IF-3, N-terminal domain CCD81_RS02080 PF01632 Ribosomal protein L35 CCD81_RS02085 PF00453 Ribosomal protein L20 CCD81_RS02095 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CCD81_RS02095 PF01409 tRNA synthetases class II core domain (F) CCD81_RS02110 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CCD81_RS02110 PF01588 Putative tRNA binding domain CCD81_RS02110 PF03484 tRNA synthetase B5 domain CCD81_RS02110 PF03147 Ferredoxin-fold anticodon binding domain CCD81_RS02110 PF03483 B3/4 domain CCD81_RS02115 PF00216 Bacterial DNA-binding protein CCD81_RS02140 PF00202 Aminotransferase class-III CCD81_RS02140 PF04055 Radical SAM superfamily CCD81_RS02140 PF06968 Biotin and Thiamin Synthesis associated domain CCD81_RS02170 PF04345 Chorismate lyase CCD81_RS02175 PF01040 UbiA prenyltransferase family CCD81_RS02180 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CCD81_RS02185 PF07475 HPr Serine kinase C-terminal domain CCD81_RS02185 PF02603 HPr Serine kinase N terminus CCD81_RS02190 PF03668 P-loop ATPase protein family CCD81_RS02195 PF01926 50S ribosome-binding GTPase CCD81_RS02200 PF04079 Segregation and condensation complex subunit ScpB CCD81_RS02205 PF02463 RecF/RecN/SMC N terminal domain CCD81_RS02230 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CCD81_RS02230 PF01266 FAD dependent oxidoreductase CCD81_RS02240 PF01209 ubiE/COQ5 methyltransferase family CCD81_RS02250 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CCD81_RS02260 PF06962 Putative rRNA methylase CCD81_RS02265 PF17209 Hfq protein CCD81_RS02270 PF00768 D-alanyl-D-alanine carboxypeptidase CCD81_RS02275 PF00578 AhpC/TSA family CCD81_RS02280 PF02899 Phage integrase, N-terminal SAM-like domain CCD81_RS02280 PF00589 Phage integrase family CCD81_RS02320 PF04321 RmlD substrate binding domain CCD81_RS02325 PF01259 SAICAR synthetase CCD81_RS02335 PF00575 S1 RNA binding domain CCD81_RS02335 PF03725 3' exoribonuclease family, domain 2 CCD81_RS02335 PF00013 KH domain CCD81_RS02335 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CCD81_RS02335 PF01138 3' exoribonuclease family, domain 1 CCD81_RS02350 PF01678 Diaminopimelate epimerase CCD81_RS02360 PF00291 Pyridoxal-phosphate dependent enzyme CCD81_RS02375 PF10502 Signal peptidase, peptidase S26 CCD81_RS02380 PF03144 Elongation factor Tu domain 2 CCD81_RS02380 PF06421 GTP-binding protein LepA C-terminus CCD81_RS02380 PF00679 Elongation factor G C-terminus CCD81_RS02380 PF00009 Elongation factor Tu GTP binding domain CCD81_RS02385 PF01048 Phosphorylase superfamily CCD81_RS02390 PF00437 Type II/IV secretion system protein CCD81_RS02395 PF09115 DNA polymerase III, delta subunit, C terminal CCD81_RS02405 PF01026 TatD related DNase CCD81_RS02415 PF00462 Glutaredoxin CCD81_RS02455 PF01208 Uroporphyrinogen decarboxylase (URO-D) CCD81_RS02460 PF18073 Rubredoxin metal binding domain CCD81_RS02480 PF13361 UvrD-like helicase C-terminal domain CCD81_RS02480 PF00580 UvrD/REP helicase N-terminal domain CCD81_RS02480 PF12705 PD-(D/E)XK nuclease superfamily CCD81_RS02485 PF04261 Dyp-type peroxidase family CCD81_RS02495 PF00497 Bacterial extracellular solute-binding proteins, family 3 CCD81_RS02500 PF00528 Binding-protein-dependent transport system inner membrane component CCD81_RS02505 PF00005 ABC transporter CCD81_RS02510 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CCD81_RS02510 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CCD81_RS02510 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CCD81_RS02510 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CCD81_RS02515 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CCD81_RS02520 PF00939 Sodium:sulfate symporter transmembrane region CCD81_RS02540 PF01195 Peptidyl-tRNA hydrolase CCD81_RS02545 PF03658 RnfH family Ubiquitin CCD81_RS02550 PF03364 Polyketide cyclase / dehydrase and lipid transport CCD81_RS02555 PF00004 ATPase family associated with various cellular activities (AAA) CCD81_RS02555 PF17862 AAA+ lid domain CCD81_RS02555 PF01434 Peptidase family M41 CCD81_RS02555 PF06480 FtsH Extracellular CCD81_RS02560 PF01728 FtsJ-like methyltransferase CCD81_RS02565 PF01985 CRS1 / YhbY (CRM) domain CCD81_RS02570 PF00490 Delta-aminolevulinic acid dehydratase CCD81_RS02575 PF01053 Cys/Met metabolism PLP-dependent enzyme CCD81_RS02580 PF02649 Type I GTP cyclohydrolase folE2 CCD81_RS02585 PF00881 Nitroreductase family CCD81_RS02590 PF01479 S4 domain CCD81_RS02590 PF00849 RNA pseudouridylate synthase CCD81_RS02595 PF01513 ATP-NAD kinase CCD81_RS02605 PF01370 NAD dependent epimerase/dehydratase family CCD81_RS02610 PF08359 YsiA-like protein, C-terminal region CCD81_RS02610 PF00440 Bacterial regulatory proteins, tetR family CCD81_RS02615 PF01565 FAD binding domain CCD81_RS02615 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CCD81_RS02620 PF01554 MatE CCD81_RS02635 PF13393 Histidyl-tRNA synthetase CCD81_RS02640 PF00709 Adenylosuccinate synthetase CCD81_RS02685 PF01435 Peptidase family M48 CCD81_RS02695 PF05191 Adenylate kinase, active site lid CCD81_RS02705 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CCD81_RS02710 PF00294 pfkB family carbohydrate kinase CCD81_RS02710 PF01467 Cytidylyltransferase-like CCD81_RS02715 PF01381 Helix-turn-helix CCD81_RS02715 PF00145 C-5 cytosine-specific DNA methylase CCD81_RS02725 PF01370 NAD dependent epimerase/dehydratase family CCD81_RS02730 PF12161 HsdM N-terminal domain CCD81_RS02730 PF02384 N-6 DNA Methylase CCD81_RS02740 PF01420 Type I restriction modification DNA specificity domain CCD81_RS02755 PF01420 Type I restriction modification DNA specificity domain CCD81_RS02760 PF12008 Type I restriction and modification enzyme - subunit R C terminal CCD81_RS02760 PF18766 SWI2/SNF2 ATPase CCD81_RS02760 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CCD81_RS02765 PF02861 Clp amino terminal domain, pathogenicity island component CCD81_RS02765 PF17871 AAA lid domain CCD81_RS02765 PF07724 AAA domain (Cdc48 subfamily) CCD81_RS02765 PF00004 ATPase family associated with various cellular activities (AAA) CCD81_RS02765 PF10431 C-terminal, D2-small domain, of ClpB protein CCD81_RS02770 PF02617 ATP-dependent Clp protease adaptor protein ClpS CCD81_RS02775 PF00313 'Cold-shock' DNA-binding domain CCD81_RS02785 PF01523 Putative modulator of DNA gyrase CCD81_RS02790 PF04751 Protein of unknown function (DUF615) CCD81_RS02800 PF17768 RecJ OB domain CCD81_RS02800 PF02272 DHHA1 domain CCD81_RS02800 PF01368 DHH family CCD81_RS02805 PF12626 Polymerase A arginine-rich C-terminus CCD81_RS02805 PF12627 Probable RNA and SrmB- binding site of polymerase A CCD81_RS02805 PF01743 Poly A polymerase head domain CCD81_RS02815 PF02562 PhoH-like protein CCD81_RS02820 PF13439 Glycosyltransferase Family 4 CCD81_RS02830 PF00692 dUTPase CCD81_RS02840 PF04381 Putative exonuclease, RdgC CCD81_RS02845 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CCD81_RS02845 PF01926 50S ribosome-binding GTPase CCD81_RS02850 PF09976 Tetratricopeptide repeat-like domain CCD81_RS02855 PF13393 Histidyl-tRNA synthetase CCD81_RS02855 PF03129 Anticodon binding domain CCD81_RS02940 PF00849 RNA pseudouridylate synthase CCD81_RS02965 PF02548 Ketopantoate hydroxymethyltransferase CCD81_RS02970 PF02569 Pantoate-beta-alanine ligase CCD81_RS02980 PF03550 Outer membrane lipoprotein LolB CCD81_RS02985 PF08544 GHMP kinases C terminal CCD81_RS02985 PF00288 GHMP kinases N terminal domain CCD81_RS03005 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CCD81_RS03005 PF14572 Phosphoribosyl synthetase-associated domain CCD81_RS03010 PF01386 Ribosomal L25p family CCD81_RS03010 PF14693 Ribosomal protein TL5, C-terminal domain CCD81_RS03015 PF07943 Penicillin-binding protein 5, C-terminal domain CCD81_RS03015 PF00768 D-alanyl-D-alanine carboxypeptidase CCD81_RS03025 PF00291 Pyridoxal-phosphate dependent enzyme CCD81_RS03025 PF00585 C-terminal regulatory domain of Threonine dehydratase CCD81_RS03030 PF00005 ABC transporter CCD81_RS03035 PF00528 Binding-protein-dependent transport system inner membrane component CCD81_RS03040 PF00528 Binding-protein-dependent transport system inner membrane component CCD81_RS03055 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family CCD81_RS03060 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CCD81_RS03060 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CCD81_RS03070 PF03796 DnaB-like helicase C terminal domain CCD81_RS03070 PF00772 DnaB-like helicase N terminal domain CCD81_RS03075 PF12019 Type II transport protein GspH CCD81_RS03075 PF07963 Prokaryotic N-terminal methylation motif CCD81_RS03095 PF00114 Pilin (bacterial filament) CCD81_RS03095 PF07963 Prokaryotic N-terminal methylation motif CCD81_RS03115 PF00692 dUTPase CCD81_RS03120 PF00155 Aminotransferase class I and II CCD81_RS03125 PF03883 Peroxide stress protein YaaA CCD81_RS03140 PF01609 Transposase DDE domain CCD81_RS03150 PF03971 Monomeric isocitrate dehydrogenase CCD81_RS03165 PF07922 Glycosyltransferase family 52 CCD81_RS03170 PF01322 Cytochrome C' CCD81_RS03175 PF00106 short chain dehydrogenase CCD81_RS03180 PF03061 Thioesterase superfamily CCD81_RS03185 PF02462 Opacity family porin protein CCD81_RS03195 PF00561 alpha/beta hydrolase fold CCD81_RS03200 PF06804 NlpB/DapX lipoprotein CCD81_RS03205 PF00701 Dihydrodipicolinate synthetase family CCD81_RS03220 PF08032 RNA 2'-O ribose methyltransferase substrate binding CCD81_RS03220 PF00588 SpoU rRNA Methylase family CCD81_RS03230 PF14437 MafB19-like deaminase CCD81_RS03255 PF09285 Elongation factor P, C-terminal CCD81_RS03255 PF08207 Elongation factor P (EF-P) KOW-like domain CCD81_RS03255 PF01132 Elongation factor P (EF-P) OB domain CCD81_RS03265 PF07021 Methionine biosynthesis protein MetW CCD81_RS03265 PF00561 alpha/beta hydrolase fold CCD81_RS03270 PF00561 alpha/beta hydrolase fold CCD81_RS03280 PF00444 Ribosomal protein L36 CCD81_RS03285 PF01197 Ribosomal protein L31 CCD81_RS03290 PF02219 Methylenetetrahydrofolate reductase CCD81_RS03295 PF08267 Cobalamin-independent synthase, N-terminal domain CCD81_RS03295 PF01717 Cobalamin-independent synthase, Catalytic domain CCD81_RS03305 PF08534 Redoxin CCD81_RS03305 PF00462 Glutaredoxin CCD81_RS03310 PF07992 Pyridine nucleotide-disulphide oxidoreductase CCD81_RS03310 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CCD81_RS03330 PF00890 FAD binding domain CCD81_RS03330 PF02910 Fumarate reductase flavoprotein C-term CCD81_RS03335 PF13085 2Fe-2S iron-sulfur cluster binding domain CCD81_RS03340 PF03937 Flavinator of succinate dehydrogenase CCD81_RS03350 PF00285 Citrate synthase, C-terminal domain CCD81_RS03355 PF16870 2-oxoglutarate dehydrogenase C-terminal CCD81_RS03355 PF02779 Transketolase, pyrimidine binding domain CCD81_RS03355 PF16078 2-oxoglutarate dehydrogenase N-terminus CCD81_RS03355 PF00676 Dehydrogenase E1 component CCD81_RS03360 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CCD81_RS03360 PF00364 Biotin-requiring enzyme CCD81_RS03360 PF02817 e3 binding domain CCD81_RS03375 PF07992 Pyridine nucleotide-disulphide oxidoreductase CCD81_RS03375 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CCD81_RS03385 PF08442 ATP-grasp domain CCD81_RS03385 PF00549 CoA-ligase CCD81_RS03390 PF00549 CoA-ligase CCD81_RS03390 PF02629 CoA binding domain CCD81_RS03395 PF01797 Transposase IS200 like CCD81_RS03400 PF13411 MerR HTH family regulatory protein CCD81_RS03400 PF00145 C-5 cytosine-specific DNA methylase CCD81_RS03410 PF17760 UvrA interaction domain CCD81_RS03410 PF17755 UvrA DNA-binding domain CCD81_RS03415 PF02666 Phosphatidylserine decarboxylase CCD81_RS03425 PF00593 TonB dependent receptor CCD81_RS03425 PF07715 TonB-dependent Receptor Plug Domain CCD81_RS03435 PF00117 Glutamine amidotransferase class-I CCD81_RS03440 PF00591 Glycosyl transferase family, a/b domain CCD81_RS03440 PF02885 Glycosyl transferase family, helical bundle domain CCD81_RS03495 PF02525 Flavodoxin-like fold CCD81_RS03500 PF02233 NAD(P) transhydrogenase beta subunit CCD81_RS03510 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CCD81_RS03510 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CCD81_RS03510 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CCD81_RS03530 PF01808 AICARFT/IMPCHase bienzyme CCD81_RS03530 PF02142 MGS-like domain CCD81_RS03590 PF07411 Domain of unknown function (DUF1508) CCD81_RS03630 PF01609 Transposase DDE domain CCD81_RS03635 PF13018 Extended Signal Peptide of Type V secretion system CCD81_RS03635 PF15401 Tryptophan-ring motif of head of Trimeric autotransporter adhesin CCD81_RS03635 PF03895 YadA-like membrane anchor domain CCD81_RS03635 PF05662 Coiled stalk of trimeric autotransporter adhesin CCD81_RS03640 PF00301 Rubredoxin CCD81_RS03665 PF09330 D-lactate dehydrogenase, membrane binding CCD81_RS03665 PF01565 FAD binding domain CCD81_RS03680 PF01207 Dihydrouridine synthase (Dus) CCD81_RS03690 PF01609 Transposase DDE domain CCD81_RS03780 PF13276 HTH-like domain CCD81_RS03780 PF00665 Integrase core domain CCD81_RS03780 PF13333 Integrase core domain CCD81_RS03815 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CCD81_RS03815 PF02222 ATP-grasp domain CCD81_RS03825 PF04715 Anthranilate synthase component I, N terminal region CCD81_RS03825 PF00425 chorismate binding enzyme CCD81_RS03835 PF00005 ABC transporter CCD81_RS03835 PF16326 ABC transporter C-terminal domain CCD81_RS03835 PF12848 ABC transporter CCD81_RS03840 PF09335 SNARE associated Golgi protein CCD81_RS03850 PF01609 Transposase DDE domain CCD81_RS03855 PF00464 Serine hydroxymethyltransferase CCD81_RS03880 PF04325 Protein of unknown function (DUF465) CCD81_RS03885 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain CCD81_RS03890 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ CCD81_RS03895 PF02660 Glycerol-3-phosphate acyltransferase CCD81_RS03905 PF00293 NUDIX domain CCD81_RS03915 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CCD81_RS03930 PF17854 FtsK alpha domain CCD81_RS03930 PF01580 FtsK/SpoIIIE family CCD81_RS03930 PF09397 Ftsk gamma domain CCD81_RS03935 PF00171 Aldehyde dehydrogenase family CCD81_RS03940 PF01472 PUA domain CCD81_RS03940 PF00696 Amino acid kinase family CCD81_RS03950 PF00682 HMGL-like CCD81_RS03950 PF08502 LeuA allosteric (dimerisation) domain CCD81_RS03955 PF02810 SEC-C motif CCD81_RS03955 PF03695 Uncharacterised protein family (UPF0149) CCD81_RS03960 PF01790 Prolipoprotein diacylglyceryl transferase CCD81_RS03965 PF00246 Zinc carboxypeptidase CCD81_RS03965 PF18027 Cytosolic carboxypeptidase N-terminal domain CCD81_RS03970 PF00696 Amino acid kinase family CCD81_RS04020 PF00308 Bacterial dnaA protein CCD81_RS04020 PF08299 Bacterial dnaA protein helix-turn-helix CCD81_RS04025 PF06472 ABC transporter transmembrane region 2 CCD81_RS04025 PF00005 ABC transporter CCD81_RS04060 PF07352 Bacteriophage Mu Gam like protein CCD81_RS04070 PF08346 AntA/AntB antirepressor CCD81_RS04070 PF10548 P22AR C-terminal domain CCD81_RS04150 PF07411 Domain of unknown function (DUF1508) CCD81_RS04190 PF06074 Protein of unknown function (DUF935) CCD81_RS04200 PF05069 Phage virion morphogenesis family CCD81_RS04205 PF10123 Mu-like prophage I protein CCD81_RS04210 PF10124 Mu-like prophage major head subunit gpT CCD81_RS04335 PF00005 ABC transporter CCD81_RS04335 PF06472 ABC transporter transmembrane region 2 CCD81_RS04345 PF05643 Putative bacterial lipoprotein (DUF799) CCD81_RS04355 PF03783 Curli production assembly/transport component CsgG CCD81_RS04365 PF01593 Flavin containing amine oxidoreductase CCD81_RS04380 PF00012 Hsp70 protein CCD81_RS04390 PF10077 Uncharacterized protein conserved in bacteria (DUF2314) CCD81_RS04395 PF00111 2Fe-2S iron-sulfur cluster binding domain CCD81_RS04415 PF04384 Iron-sulphur cluster assembly CCD81_RS04420 PF01479 S4 domain CCD81_RS04425 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CCD81_RS04430 PF09179 TilS substrate binding domain CCD81_RS04430 PF01171 PP-loop family CCD81_RS04435 PF08032 RNA 2'-O ribose methyltransferase substrate binding CCD81_RS04435 PF00588 SpoU rRNA Methylase family CCD81_RS04455 PF01225 Mur ligase family, catalytic domain CCD81_RS04455 PF08245 Mur ligase middle domain CCD81_RS04455 PF02875 Mur ligase family, glutamate ligase domain CCD81_RS04465 PF04055 Radical SAM superfamily CCD81_RS04465 PF06968 Biotin and Thiamin Synthesis associated domain CCD81_RS04490 PF00920 Dehydratase family CCD81_RS04495 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CCD81_RS04495 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CCD81_RS04500 PF00175 Oxidoreductase NAD-binding domain CCD81_RS04500 PF00258 Flavodoxin CCD81_RS04500 PF00667 FAD binding domain CCD81_RS04505 PF00009 Elongation factor Tu GTP binding domain CCD81_RS04510 PF01507 Phosphoadenosine phosphosulfate reductase family CCD81_RS04515 PF01507 Phosphoadenosine phosphosulfate reductase family CCD81_RS04520 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CCD81_RS04520 PF10414 Sirohaem synthase dimerisation region CCD81_RS04520 PF14824 Sirohaem biosynthesis protein central CCD81_RS04530 PF01256 Carbohydrate kinase CCD81_RS04535 PF03144 Elongation factor Tu domain 2 CCD81_RS04535 PF00009 Elongation factor Tu GTP binding domain CCD81_RS04535 PF00679 Elongation factor G C-terminus CCD81_RS04560 PF00575 S1 RNA binding domain CCD81_RS04560 PF17876 Cold shock domain CCD81_RS04560 PF08206 Ribonuclease B OB domain CCD81_RS04560 PF00773 RNB domain CCD81_RS04560 PF08461 Ribonuclease R winged-helix domain CCD81_RS04570 PF00571 CBS domain CCD81_RS04570 PF00478 IMP dehydrogenase / GMP reductase domain CCD81_RS04575 PF01966 HD domain CCD81_RS04575 PF08335 GlnD PII-uridylyltransferase CCD81_RS04580 PF01381 Helix-turn-helix CCD81_RS04590 PF00210 Ferritin-like domain CCD81_RS04595 PF00210 Ferritin-like domain CCD81_RS04600 PF04055 Radical SAM superfamily CCD81_RS04600 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CCD81_RS04605 PF03099 Biotin/lipoate A/B protein ligase family CCD81_RS04610 PF04359 Protein of unknown function (DUF493) CCD81_RS04615 PF01594 AI-2E family transporter CCD81_RS04620 PF01145 SPFH domain / Band 7 family CCD81_RS04620 PF16200 C-terminal region of band_7 CCD81_RS04630 PF03167 Uracil DNA glycosylase superfamily CCD81_RS04665 PF00742 Homoserine dehydrogenase CCD81_RS04665 PF03447 Homoserine dehydrogenase, NAD binding domain CCD81_RS04665 PF01842 ACT domain CCD81_RS04675 PF00216 Bacterial DNA-binding protein CCD81_RS04680 PF00004 ATPase family associated with various cellular activities (AAA) CCD81_RS04680 PF05362 Lon protease (S16) C-terminal proteolytic domain CCD81_RS04680 PF02190 ATP-dependent protease La (LON) substrate-binding domain CCD81_RS04690 PF05175 Methyltransferase small domain CCD81_RS04690 PF17827 PrmC N-terminal domain CCD81_RS04695 PF13538 UvrD-like helicase C-terminal domain CCD81_RS04700 PF00005 ABC transporter CCD81_RS04705 PF12704 MacB-like periplasmic core domain CCD81_RS04705 PF02687 FtsX-like permease family CCD81_RS04715 PF13662 Toprim domain CCD81_RS04715 PF02132 RecR protein CCD81_RS04725 PF03960 ArsC family CCD81_RS04730 PF12848 ABC transporter CCD81_RS04730 PF00005 ABC transporter CCD81_RS04735 PF01966 HD domain CCD81_RS04735 PF12627 Probable RNA and SrmB- binding site of polymerase A CCD81_RS04735 PF01743 Poly A polymerase head domain CCD81_RS04745 PF17864 RuvB AAA lid domain CCD81_RS04745 PF05491 RuvB C-terminal winged helix domain CCD81_RS04745 PF05496 Holliday junction DNA helicase RuvB P-loop domain CCD81_RS04750 PF00834 Ribulose-phosphate 3 epimerase family CCD81_RS04770 PF07730 Histidine kinase CCD81_RS04770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCD81_RS04770 PF00672 HAMP domain CCD81_RS04770 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CCD81_RS04775 PF00072 Response regulator receiver domain CCD81_RS04775 PF00196 Bacterial regulatory proteins, luxR family CCD81_RS04780 PF00586 AIR synthase related protein, N-terminal domain CCD81_RS04780 PF02769 AIR synthase related protein, C-terminal domain CCD81_RS04800 PF00925 GTP cyclohydrolase II CCD81_RS04805 PF00535 Glycosyl transferase family 2 CCD81_RS04810 PF00925 GTP cyclohydrolase II CCD81_RS04810 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CCD81_RS04820 PF02384 N-6 DNA Methylase CCD81_RS04820 PF12161 HsdM N-terminal domain CCD81_RS04830 PF12008 Type I restriction and modification enzyme - subunit R C terminal CCD81_RS04830 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CCD81_RS04830 PF18766 SWI2/SNF2 ATPase CCD81_RS04835 PF00004 ATPase family associated with various cellular activities (AAA) CCD81_RS04835 PF12002 MgsA AAA+ ATPase C terminal CCD81_RS04835 PF16193 AAA C-terminal domain CCD81_RS04850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCD81_RS04850 PF03466 LysR substrate binding domain CCD81_RS04865 PF14821 Threonine synthase N terminus CCD81_RS04865 PF00291 Pyridoxal-phosphate dependent enzyme CCD81_RS04875 PF00175 Oxidoreductase NAD-binding domain CCD81_RS04875 PF00970 Oxidoreductase FAD-binding domain CCD81_RS04885 PF00403 Heavy-metal-associated domain CCD81_RS04890 PF01926 50S ribosome-binding GTPase CCD81_RS04890 PF13167 GTP-binding GTPase N-terminal CCD81_RS04890 PF16360 GTP-binding GTPase Middle Region CCD81_RS04900 PF02677 Epoxyqueuosine reductase QueH CCD81_RS04905 PF04002 RadC-like JAB domain CCD81_RS04915 PF00330 Aconitase family (aconitate hydratase) CCD81_RS04925 PF00694 Aconitase C-terminal domain CCD81_RS04930 PF00145 C-5 cytosine-specific DNA methylase CCD81_RS04935 PF09564 NgoBV restriction endonuclease CCD81_RS04940 PF00180 Isocitrate/isopropylmalate dehydrogenase CCD81_RS04945 PF04264 YceI-like domain CCD81_RS04960 PF10415 Fumarase C C-terminus CCD81_RS04960 PF00206 Lyase CCD81_RS04970 PF00684 DnaJ central domain CCD81_RS04970 PF01556 DnaJ C terminal domain CCD81_RS04970 PF00226 DnaJ domain CCD81_RS04980 PF01042 Endoribonuclease L-PSP CCD81_RS04990 PF01171 PP-loop family CCD81_RS05000 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CCD81_RS05005 PF02492 CobW/HypB/UreG, nucleotide-binding domain CCD81_RS05005 PF07683 Cobalamin synthesis protein cobW C-terminal domain CCD81_RS05015 PF01451 Low molecular weight phosphotyrosine protein phosphatase CCD81_RS05020 PF02595 Glycerate kinase family CCD81_RS05030 PF13847 Methyltransferase domain CCD81_RS05030 PF10119 Predicted methyltransferase regulatory domain CCD81_RS05035 PF00403 Heavy-metal-associated domain CCD81_RS05050 PF03062 MBOAT, membrane-bound O-acyltransferase family CCD81_RS05070 PF00501 AMP-binding enzyme CCD81_RS05070 PF13193 AMP-binding enzyme C-terminal domain CCD81_RS05075 PF02028 BCCT, betaine/carnitine/choline family transporter CCD81_RS05090 PF13406 Transglycosylase SLT domain CCD81_RS05110 PF17757 UvrB interaction domain CCD81_RS05110 PF00271 Helicase conserved C-terminal domain CCD81_RS05110 PF00270 DEAD/DEAH box helicase CCD81_RS05110 PF02559 CarD-like/TRCF domain CCD81_RS05110 PF03461 TRCF domain CCD81_RS05115 PF02261 Aspartate decarboxylase CCD81_RS05120 PF00793 DAHP synthetase I family CCD81_RS05130 PF00113 Enolase, C-terminal TIM barrel domain CCD81_RS05130 PF03952 Enolase, N-terminal domain CCD81_RS05135 PF04977 Septum formation initiator CCD81_RS05140 PF00111 2Fe-2S iron-sulfur cluster binding domain CCD81_RS05145 PF00268 Ribonucleotide reductase, small chain CCD81_RS05150 PF09217 Restriction endonuclease EcoRII, N-terminal CCD81_RS05150 PF09019 EcoRII C terminal CCD81_RS05155 PF00145 C-5 cytosine-specific DNA methylase CCD81_RS05155 PF01381 Helix-turn-helix CCD81_RS05160 PF02867 Ribonucleotide reductase, barrel domain CCD81_RS05160 PF03477 ATP cone domain CCD81_RS05160 PF00317 Ribonucleotide reductase, all-alpha domain CCD81_RS05175 PF01553 Acyltransferase CCD81_RS05180 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CCD81_RS05180 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CCD81_RS05180 PF06827 Zinc finger found in FPG and IleRS CCD81_RS05190 PF01476 LysM domain CCD81_RS05190 PF01464 Transglycosylase SLT domain CCD81_RS05195 PF01479 S4 domain CCD81_RS05195 PF00849 RNA pseudouridylate synthase CCD81_RS05215 PF02224 Cytidylate kinase CCD81_RS05220 PF00575 S1 RNA binding domain CCD81_RS05225 PF00216 Bacterial DNA-binding protein CCD81_RS05235 PF13411 MerR HTH family regulatory protein CCD81_RS05240 PF08240 Alcohol dehydrogenase GroES-like domain CCD81_RS05240 PF00107 Zinc-binding dehydrogenase CCD81_RS05245 PF00756 Putative esterase CCD81_RS05250 PF03969 AFG1-like ATPase CCD81_RS05255 PF00334 Nucleoside diphosphate kinase CCD81_RS05260 PF04055 Radical SAM superfamily CCD81_RS05270 PF04551 GcpE protein CCD81_RS05275 PF00574 Clp protease CCD81_RS05280 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CCD81_RS05280 PF05698 Bacterial trigger factor protein (TF) C-terminus CCD81_RS05280 PF05697 Bacterial trigger factor protein (TF) CCD81_RS05285 PF01580 FtsK/SpoIIIE family CCD81_RS05285 PF09397 Ftsk gamma domain CCD81_RS05285 PF17854 FtsK alpha domain CCD81_RS05285 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CCD81_RS05290 PF00860 Permease family CCD81_RS05310 PF01066 CDP-alcohol phosphatidyltransferase CCD81_RS05315 PF01925 Sulfite exporter TauE/SafE CCD81_RS05325 PF03948 Ribosomal protein L9, C-terminal domain CCD81_RS05325 PF01281 Ribosomal protein L9, N-terminal domain CCD81_RS05330 PF01084 Ribosomal protein S18 CCD81_RS05340 PF01250 Ribosomal protein S6 CCD81_RS05345 PF07992 Pyridine nucleotide-disulphide oxidoreductase CCD81_RS05350 PF00403 Heavy-metal-associated domain CCD81_RS05355 PF02151 UvrB/uvrC motif CCD81_RS05355 PF08459 UvrC Helix-hairpin-helix N-terminal CCD81_RS05355 PF01541 GIY-YIG catalytic domain CCD81_RS05360 PF08238 Sel1 repeat CCD81_RS05365 PF02390 Putative methyltransferase CCD81_RS05385 PF17757 UvrB interaction domain CCD81_RS05385 PF12344 Ultra-violet resistance protein B CCD81_RS05385 PF04851 Type III restriction enzyme, res subunit CCD81_RS05385 PF00271 Helicase conserved C-terminal domain CCD81_RS05385 PF02151 UvrB/uvrC motif CCD81_RS05390 PF03572 Peptidase family S41 CCD81_RS05390 PF13180 PDZ domain CCD81_RS05395 PF01551 Peptidase family M23 CCD81_RS05400 PF05981 CreA protein CCD81_RS05405 PF02622 Uncharacterized ACR, COG1678 CCD81_RS05410 PF03652 Holliday junction resolvase CCD81_RS05415 PF01557 Fumarylacetoacetate (FAA) hydrolase family CCD81_RS05420 PF04073 Aminoacyl-tRNA editing domain CCD81_RS05420 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CCD81_RS05420 PF03129 Anticodon binding domain CCD81_RS05425 PF00456 Transketolase, thiamine diphosphate binding domain CCD81_RS05425 PF17831 Pyruvate dehydrogenase E1 component middle domain CCD81_RS05430 PF02817 e3 binding domain CCD81_RS05430 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CCD81_RS05430 PF00364 Biotin-requiring enzyme CCD81_RS05435 PF07992 Pyridine nucleotide-disulphide oxidoreductase CCD81_RS05435 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CCD81_RS05450 PF00459 Inositol monophosphatase family CCD81_RS05460 PF00588 SpoU rRNA Methylase family CCD81_RS05475 PF01029 NusB family CCD81_RS05475 PF01189 16S rRNA methyltransferase RsmB/F CCD81_RS05485 PF00171 Aldehyde dehydrogenase family CCD81_RS05490 PF01914 MarC family integral membrane protein CCD81_RS05495 PF02686 Glu-tRNAGln amidotransferase C subunit CCD81_RS05500 PF01425 Amidase CCD81_RS05505 PF04393 Protein of unknown function (DUF535) CCD81_RS05510 PF02934 GatB/GatE catalytic domain CCD81_RS05510 PF02637 GatB domain CCD81_RS05515 PF00111 2Fe-2S iron-sulfur cluster binding domain CCD81_RS05515 PF00175 Oxidoreductase NAD-binding domain CCD81_RS05515 PF00970 Oxidoreductase FAD-binding domain CCD81_RS05520 PF01243 Pyridoxamine 5'-phosphate oxidase CCD81_RS05520 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CCD81_RS05525 PF01479 S4 domain CCD81_RS05525 PF00849 RNA pseudouridylate synthase CCD81_RS05535 PF13742 OB-fold nucleic acid binding domain CCD81_RS05535 PF02601 Exonuclease VII, large subunit CCD81_RS05545 PF02540 NAD synthase CCD81_RS05550 PF01814 Hemerythrin HHE cation binding domain CCD81_RS05560 PF00085 Thioredoxin CCD81_RS05565 PF10672 S-adenosylmethionine-dependent methyltransferase CCD81_RS05570 PF00270 DEAD/DEAH box helicase CCD81_RS05570 PF00271 Helicase conserved C-terminal domain CCD81_RS05600 PF00202 Aminotransferase class-III CCD81_RS05605 PF10431 C-terminal, D2-small domain, of ClpB protein CCD81_RS05605 PF06689 ClpX C4-type zinc finger CCD81_RS05605 PF07724 AAA domain (Cdc48 subfamily) CCD81_RS05610 PF02033 Ribosome-binding factor A CCD81_RS05615 PF01509 TruB family pseudouridylate synthase (N terminal domain) CCD81_RS05615 PF16198 tRNA pseudouridylate synthase B C-terminal domain CCD81_RS05615 PF09157 Pseudouridine synthase II TruB, C-terminal CCD81_RS05625 PF04851 Type III restriction enzyme, res subunit CCD81_RS05630 PF01070 FMN-dependent dehydrogenase CCD81_RS05635 PF02082 Transcriptional regulator CCD81_RS05640 PF00266 Aminotransferase class-V CCD81_RS05645 PF01592 NifU-like N terminal domain CCD81_RS05650 PF01521 Iron-sulphur cluster biosynthesis CCD81_RS05655 PF03889 Alternative ribosome-rescue factor A CCD81_RS05660 PF07743 HSCB C-terminal oligomerisation domain CCD81_RS05660 PF00226 DnaJ domain CCD81_RS05665 PF00521 DNA gyrase/topoisomerase IV, subunit A CCD81_RS05665 PF03989 DNA gyrase C-terminal domain, beta-propeller CCD81_RS05695 PF00342 Phosphoglucose isomerase CCD81_RS05700 PF01418 Helix-turn-helix domain, rpiR family CCD81_RS05700 PF01380 SIS domain CCD81_RS05705 PF02685 Glucokinase CCD81_RS05710 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CCD81_RS05715 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CCD81_RS05715 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CCD81_RS05725 PF00920 Dehydratase family CCD81_RS05730 PF01081 KDPG and KHG aldolase CCD81_RS05745 PF00633 Helix-hairpin-helix motif CCD81_RS05745 PF14815 NUDIX domain CCD81_RS05745 PF00730 HhH-GPD superfamily base excision DNA repair protein CCD81_RS05745 PF10576 Iron-sulfur binding domain of endonuclease III CCD81_RS05750 PF00080 Copper/zinc superoxide dismutase (SODC) CCD81_RS05760 PF01609 Transposase DDE domain CCD81_RS05790 PF06594 Haemolysin-type calcium binding protein related domain CCD81_RS05790 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) CCD81_RS05795 PF11940 Domain of unknown function (DUF3458) Ig-like fold CCD81_RS05795 PF01433 Peptidase family M1 domain CCD81_RS05795 PF17432 Domain of unknown function (DUF3458_C) ARM repeats CCD81_RS05820 PF02075 Crossover junction endodeoxyribonuclease RuvC CCD81_RS05825 PF02954 Bacterial regulatory protein, Fis family CCD81_RS05830 PF01207 Dihydrouridine synthase (Dus) CCD81_RS05840 PF00271 Helicase conserved C-terminal domain CCD81_RS05840 PF00270 DEAD/DEAH box helicase CCD81_RS05850 PF02661 Fic/DOC family CCD81_RS05850 PF13784 Fic/DOC family N-terminal CCD81_RS05860 PF01336 OB-fold nucleic acid binding domain CCD81_RS05860 PF00152 tRNA synthetases class II (D, K and N) CCD81_RS05875 PF00557 Metallopeptidase family M24 CCD81_RS05875 PF01321 Creatinase/Prolidase N-terminal domain CCD81_RS05880 PF00267 Gram-negative porin CCD81_RS05890 PF01272 Transcription elongation factor, GreA/GreB, C-term CCD81_RS05890 PF03449 Transcription elongation factor, N-terminal CCD81_RS05900 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CCD81_RS05905 PF00877 NlpC/P60 family CCD81_RS05915 PF13091 PLD-like domain CCD81_RS05920 PF07690 Major Facilitator Superfamily CCD81_RS05925 PF02754 Cysteine-rich domain CCD81_RS05930 PF02589 LUD domain CCD81_RS05935 PF02589 LUD domain CCD81_RS05935 PF13183 4Fe-4S dicluster domain CCD81_RS05935 PF11870 Domain of unknown function (DUF3390) CCD81_RS05940 PF00731 AIR carboxylase CCD81_RS05960 PF08676 MutL C terminal dimerisation domain CCD81_RS05960 PF01119 DNA mismatch repair protein, C-terminal domain CCD81_RS05965 PF12169 DNA polymerase III subunits gamma and tau domain III CCD81_RS05965 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding CCD81_RS05965 PF12170 DNA polymerase III tau subunit V interacting with alpha CCD81_RS05970 PF02575 YbaB/EbfC DNA-binding family CCD81_RS06015 PF00154 recA bacterial DNA recombination protein CCD81_RS06025 PF01487 Type I 3-dehydroquinase CCD81_RS06030 PF00580 UvrD/REP helicase N-terminal domain CCD81_RS06030 PF13361 UvrD-like helicase C-terminal domain CCD81_RS06035 PF00817 impB/mucB/samB family CCD81_RS06035 PF11799 impB/mucB/samB family C-terminal domain CCD81_RS06035 PF11798 IMS family HHH motif CCD81_RS06040 PF00593 TonB dependent receptor CCD81_RS06040 PF07660 Secretin and TonB N terminus short domain CCD81_RS06040 PF07715 TonB-dependent Receptor Plug Domain CCD81_RS06045 PF07660 Secretin and TonB N terminus short domain CCD81_RS06045 PF00593 TonB dependent receptor CCD81_RS06045 PF07715 TonB-dependent Receptor Plug Domain CCD81_RS06050 PF00970 Oxidoreductase FAD-binding domain CCD81_RS06050 PF00175 Oxidoreductase NAD-binding domain CCD81_RS06055 PF00929 Exonuclease CCD81_RS06070 PF03060 Nitronate monooxygenase CCD81_RS06080 PF13746 4Fe-4S dicluster domain CCD81_RS06080 PF12801 4Fe-4S binding domain CCD81_RS06080 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase CCD81_RS06095 PF00456 Transketolase, thiamine diphosphate binding domain CCD81_RS06095 PF02780 Transketolase, C-terminal domain CCD81_RS06095 PF02779 Transketolase, pyrimidine binding domain CCD81_RS06100 PF00206 Lyase CCD81_RS06100 PF10415 Fumarase C C-terminus CCD81_RS06105 PF00892 EamA-like transporter family CCD81_RS06110 PF00436 Single-strand binding protein family CCD81_RS06115 PF07690 Major Facilitator Superfamily CCD81_RS06120 PF01551 Peptidase family M23 CCD81_RS06120 PF01464 Transglycosylase SLT domain CCD81_RS06120 PF10145 Phage-related minor tail protein CCD81_RS06140 PF02462 Opacity family porin protein CCD81_RS06165 PF04575 Protein of unknown function (DUF560) CCD81_RS06170 PF02541 Ppx/GppA phosphatase family CCD81_RS06195 PF00579 tRNA synthetases class I (W and Y) CCD81_RS06200 PF10431 C-terminal, D2-small domain, of ClpB protein CCD81_RS06200 PF02861 Clp amino terminal domain, pathogenicity island component CCD81_RS06200 PF17871 AAA lid domain CCD81_RS06200 PF07724 AAA domain (Cdc48 subfamily) CCD81_RS06200 PF00004 ATPase family associated with various cellular activities (AAA) CCD81_RS06205 PF00155 Aminotransferase class I and II CCD81_RS06210 PF01361 Tautomerase enzyme CCD81_RS06220 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CCD81_RS06220 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CCD81_RS06230 PF13419 Haloacid dehalogenase-like hydrolase CCD81_RS06235 PF02631 RecX family CCD81_RS06250 PF03061 Thioesterase superfamily CCD81_RS06255 PF01551 Peptidase family M23 CCD81_RS06255 PF01476 LysM domain CCD81_RS06265 PF01975 Survival protein SurE CCD81_RS06270 PF00571 CBS domain CCD81_RS06270 PF03741 Integral membrane protein TerC family CCD81_RS06270 PF03471 Transporter associated domain CCD81_RS06285 PF00171 Aldehyde dehydrogenase family CCD81_RS06310 PF02554 Carbon starvation protein CstA CCD81_RS06310 PF13722 5TM C-terminal transporter carbon starvation CstA CCD81_RS06330 PF00849 RNA pseudouridylate synthase CCD81_RS06335 PF07715 TonB-dependent Receptor Plug Domain CCD81_RS06335 PF00593 TonB dependent receptor CCD81_RS06350 PF13840 ACT domain CCD81_RS06350 PF01842 ACT domain CCD81_RS06350 PF00696 Amino acid kinase family CCD81_RS06360 PF03725 3' exoribonuclease family, domain 2 CCD81_RS06360 PF01138 3' exoribonuclease family, domain 1 CCD81_RS06365 PF00582 Universal stress protein family CCD81_RS06375 PF00899 ThiF family CCD81_RS06390 PF02616 Segregation and condensation protein ScpA CCD81_RS06395 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CCD81_RS06395 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CCD81_RS06400 PF05746 DALR anticodon binding domain CCD81_RS06400 PF03485 Arginyl tRNA synthetase N terminal domain CCD81_RS06400 PF00750 tRNA synthetases class I (R) CCD81_RS06420 PF00528 Binding-protein-dependent transport system inner membrane component CCD81_RS06435 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CCD81_RS06440 PF02542 YgbB family CCD81_RS06445 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CCD81_RS06450 PF00929 Exonuclease CCD81_RS06455 PF07690 Major Facilitator Superfamily CCD81_RS06470 PF00871 Acetokinase family CCD81_RS06480 PF02683 Cytochrome C biogenesis protein transmembrane region CCD81_RS06480 PF00085 Thioredoxin CCD81_RS06480 PF11412 Disulphide bond corrector protein DsbC CCD81_RS06495 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CCD81_RS06505 PF01565 FAD binding domain CCD81_RS06505 PF02913 FAD linked oxidases, C-terminal domain CCD81_RS06510 PF03797 Autotransporter beta-domain CCD81_RS06520 PF01668 SmpB protein CCD81_RS06525 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CCD81_RS06535 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CCD81_RS06535 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CCD81_RS06550 PF07687 Peptidase dimerisation domain CCD81_RS06550 PF01546 Peptidase family M20/M25/M40 CCD81_RS06555 PF10786 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) CCD81_RS06560 PF01814 Hemerythrin HHE cation binding domain CCD81_RS06565 PF00127 Copper binding proteins, plastocyanin/azurin family CCD81_RS06580 PF07516 SecA Wing and Scaffold domain CCD81_RS06580 PF01043 SecA preprotein cross-linking domain CCD81_RS06580 PF07517 SecA DEAD-like domain CCD81_RS06580 PF02810 SEC-C motif CCD81_RS06585 PF08275 DNA primase catalytic core, N-terminal domain CCD81_RS06585 PF10410 DnaB-helicase binding domain of primase CCD81_RS06585 PF08278 DNA primase DnaG DnaB-binding CCD81_RS06585 PF01807 CHC2 zinc finger CCD81_RS06590 PF00140 Sigma-70 factor, region 1.2 CCD81_RS06590 PF04542 Sigma-70 region 2 CCD81_RS06590 PF04539 Sigma-70 region 3 CCD81_RS06590 PF04545 Sigma-70, region 4 CCD81_RS06590 PF03979 Sigma-70 factor, region 1.1 CCD81_RS06590 PF04546 Sigma-70, non-essential region CCD81_RS06605 PF00593 TonB dependent receptor CCD81_RS06605 PF07715 TonB-dependent Receptor Plug Domain CCD81_RS06610 PF17484 N-Lobe handle Tf-binding protein B CCD81_RS06610 PF01298 C-lobe and N-lobe beta barrels of Tf-binding protein B CCD81_RS06610 PF17483 C-lobe handle domain of Tf-binding protein B CCD81_RS06625 PF00117 Glutamine amidotransferase class-I CCD81_RS06625 PF06418 CTP synthase N-terminus CCD81_RS06630 PF00501 AMP-binding enzyme CCD81_RS06630 PF13193 AMP-binding enzyme C-terminal domain CCD81_RS06645 PF01219 Prokaryotic diacylglycerol kinase CCD81_RS06655 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CCD81_RS06655 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CCD81_RS06660 PF00749 tRNA synthetases class I (E and Q), catalytic domain CCD81_RS06660 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CCD81_RS06665 PF08220 DeoR-like helix-turn-helix domain CCD81_RS06665 PF00455 DeoR C terminal sensor domain CCD81_RS06670 PF03956 Lysine exporter LysO CCD81_RS06675 PF07729 FCD domain CCD81_RS06675 PF00392 Bacterial regulatory proteins, gntR family CCD81_RS06685 PF02566 OsmC-like protein CCD81_RS06695 PF00551 Formyl transferase CCD81_RS06700 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CCD81_RS06700 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CCD81_RS06710 PF00883 Cytosol aminopeptidase family, catalytic domain CCD81_RS06725 PF01609 Transposase DDE domain CCD81_RS06730 PF11791 Aconitate B N-terminal domain CCD81_RS06730 PF00330 Aconitase family (aconitate hydratase) CCD81_RS06730 PF06434 Aconitate hydratase 2 N-terminus CCD81_RS06735 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CCD81_RS06735 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CCD81_RS06745 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CCD81_RS06745 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CCD81_RS06755 PF10369 Small subunit of acetolactate synthase CCD81_RS06760 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CCD81_RS06760 PF00205 Thiamine pyrophosphate enzyme, central domain CCD81_RS06760 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CCD81_RS06770 PF02630 SCO1/SenC CCD81_RS06775 PF01634 ATP phosphoribosyltransferase CCD81_RS06785 PF00815 Histidinol dehydrogenase CCD81_RS06790 PF00155 Aminotransferase class I and II CCD81_RS06795 PF00475 Imidazoleglycerol-phosphate dehydratase CCD81_RS06800 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CCD81_RS06800 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CCD81_RS06810 PF01609 Transposase DDE domain CCD81_RS06830 PF01343 Peptidase family S49 CCD81_RS06830 PF08496 Peptidase family S49 N-terminal CCD81_RS06865 PF01066 CDP-alcohol phosphatidyltransferase CCD81_RS06875 PF02627 Carboxymuconolactone decarboxylase family CCD81_RS06880 PF12852 Cupin CCD81_RS06880 PF12833 Helix-turn-helix domain CCD81_RS06890 PF00892 EamA-like transporter family CCD81_RS06895 PF13416 Bacterial extracellular solute-binding protein CCD81_RS06900 PF02272 DHHA1 domain CCD81_RS06900 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CCD81_RS06900 PF01411 tRNA synthetases class II (A) CCD81_RS06920 PF00300 Histidine phosphatase superfamily (branch 1) CCD81_RS06925 PF00521 DNA gyrase/topoisomerase IV, subunit A CCD81_RS06935 PF00158 Sigma-54 interaction domain CCD81_RS06935 PF02954 Bacterial regulatory protein, Fis family CCD81_RS06935 PF00072 Response regulator receiver domain CCD81_RS06935 PF00158 Sigma-54 interaction domain CCD81_RS06935 PF00072 Response regulator receiver domain CCD81_RS06935 PF02954 Bacterial regulatory protein, Fis family CCD81_RS06940 PF04445 Putative SAM-dependent methyltransferase CCD81_RS06960 PF01053 Cys/Met metabolism PLP-dependent enzyme CCD81_RS06975 PF00497 Bacterial extracellular solute-binding proteins, family 3 CCD81_RS06980 PF05681 Fumarate hydratase (Fumerase) CCD81_RS06980 PF05683 Fumarase C-terminus CCD81_RS06985 PF02080 TrkA-C domain CCD81_RS06985 PF02254 TrkA-N domain CCD81_RS07020 PF08543 Phosphomethylpyrimidine kinase CCD81_RS07025 PF03848 Tellurite resistance protein TehB CCD81_RS07025 PF09313 Domain of unknown function (DUF1971) CCD81_RS07030 PF00075 RNase H CCD81_RS07055 PF02016 LD-carboxypeptidase N-terminal domain CCD81_RS07055 PF17676 LD-carboxypeptidase C-terminal domain CCD81_RS07060 PF00255 Glutathione peroxidase CCD81_RS07065 PF00115 Cytochrome C and Quinol oxidase polypeptide I CCD81_RS07075 PF03781 Sulfatase-modifying factor enzyme 1 CCD81_RS07085 PF02462 Opacity family porin protein CCD81_RS07095 PF00881 Nitroreductase family CCD81_RS07100 PF00884 Sulfatase CCD81_RS07100 PF08019 Phosphoethanolamine transferase EptA/EptB CCD81_RS07110 PF00266 Aminotransferase class-V CCD81_RS07115 PF02576 RimP N-terminal domain CCD81_RS07115 PF17384 RimP C-terminal SH3 domain CCD81_RS07120 PF08529 NusA N-terminal domain CCD81_RS07120 PF13184 NusA-like KH domain CCD81_RS07125 PF04760 Translation initiation factor IF-2, N-terminal region CCD81_RS07125 PF00009 Elongation factor Tu GTP binding domain CCD81_RS07125 PF11987 Translation-initiation factor 2 CCD81_RS07130 PF01926 50S ribosome-binding GTPase CCD81_RS07130 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CCD81_RS07135 PF11067 Protein of unknown function (DUF2868) CCD81_RS07140 PF03006 Haemolysin-III related CCD81_RS07145 PF01235 Sodium:alanine symporter family CCD81_RS07150 PF01709 Transcriptional regulator CCD81_RS07155 PF02600 Disulfide bond formation protein DsbB CCD81_RS07170 PF01037 Lrp/AsnC ligand binding domain CCD81_RS07175 PF00842 Alanine racemase, C-terminal domain CCD81_RS07175 PF01168 Alanine racemase, N-terminal domain CCD81_RS07180 PF05167 Uncharacterised ACR (DUF711) CCD81_RS07195 PF05175 Methyltransferase small domain CCD81_RS07210 PF10531 SLBB domain CCD81_RS07245 PF04127 DNA / pantothenate metabolism flavoprotein CCD81_RS07245 PF02441 Flavoprotein CCD81_RS07250 PF02824 TGS domain CCD81_RS07250 PF04607 Region found in RelA / SpoT proteins CCD81_RS07250 PF13291 ACT domain CCD81_RS07255 PF01192 RNA polymerase Rpb6 CCD81_RS07260 PF00625 Guanylate kinase CCD81_RS07265 PF00156 Phosphoribosyl transferase domain CCD81_RS07285 PF01136 Peptidase family U32 CCD81_RS07285 PF16325 Peptidase family U32 C-terminal domain CCD81_RS07315 PF02470 MlaD protein CCD81_RS07325 PF13673 Acetyltransferase (GNAT) domain CCD81_RS07325 PF00958 GMP synthase C terminal domain CCD81_RS07325 PF13302 Acetyltransferase (GNAT) domain CCD81_RS07325 PF03352 Methyladenine glycosylase CCD81_RS07325 PF00117 Glutamine amidotransferase class-I CCD81_RS07345 PF02347 Glycine cleavage system P-protein CCD81_RS07360 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CCD81_RS07370 PF00155 Aminotransferase class I and II CCD81_RS07375 PF05958 tRNA (Uracil-5-)-methyltransferase CCD81_RS07380 PF01264 Chorismate synthase CCD81_RS07390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCD81_RS07390 PF00986 DNA gyrase B subunit, carboxyl terminus CCD81_RS07390 PF00204 DNA gyrase B CCD81_RS07390 PF01751 Toprim domain CCD81_RS07395 PF00293 NUDIX domain CCD81_RS07400 PF02403 Seryl-tRNA synthetase N-terminal domain CCD81_RS07400 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CCD81_RS07405 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CCD81_RS07405 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CCD81_RS07410 PF00472 RF-1 domain CCD81_RS07410 PF03462 PCRF domain CCD81_RS07420 PF17763 Glutaminase/Asparaginase C-terminal domain CCD81_RS07420 PF00710 Asparaginase, N-terminal CCD81_RS07425 PF09335 SNARE associated Golgi protein CCD81_RS07430 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CCD81_RS07430 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CCD81_RS07430 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CCD81_RS07430 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CCD81_RS07435 PF00809 Pterin binding enzyme CCD81_RS07440 PF00793 DAHP synthetase I family CCD81_RS07440 PF18152 DAHP synthase ferredoxin-like domain CCD81_RS07450 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CCD81_RS07475 PF00109 Beta-ketoacyl synthase, N-terminal domain CCD81_RS07475 PF02801 Beta-ketoacyl synthase, C-terminal domain CCD81_RS07485 PF00535 Glycosyl transferase family 2 CCD81_RS07500 PF00209 Sodium:neurotransmitter symporter family CCD81_RS07515 PF00303 Thymidylate synthase CCD81_RS07520 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CCD81_RS07520 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CCD81_RS07535 PF00392 Bacterial regulatory proteins, gntR family CCD81_RS07535 PF07729 FCD domain CCD81_RS07540 PF02652 L-lactate permease CCD81_RS07545 PF00593 TonB dependent receptor CCD81_RS07545 PF07715 TonB-dependent Receptor Plug Domain CCD81_RS07550 PF02321 Outer membrane efflux protein CCD81_RS07555 PF00873 AcrB/AcrD/AcrF family CCD81_RS07560 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CCD81_RS07560 PF00529 HlyD membrane-fusion protein of T1SS CCD81_RS07565 PF08361 MAATS-type transcriptional repressor, C-terminal region CCD81_RS07565 PF00440 Bacterial regulatory proteins, tetR family CCD81_RS07575 PF03806 AbgT putative transporter family CCD81_RS07580 PF17946 RecC C-terminal domain CCD81_RS07595 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CCD81_RS07595 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP CCD81_RS07610 PF00115 Cytochrome C and Quinol oxidase polypeptide I CCD81_RS07620 PF00753 Metallo-beta-lactamase superfamily CCD81_RS07620 PF04273 Putative phosphatase (DUF442) CCD81_RS07625 PF02472 Biopolymer transport protein ExbD/TolR CCD81_RS07630 PF01618 MotA/TolQ/ExbB proton channel family CCD81_RS07635 PF03544 Gram-negative bacterial TonB protein C-terminal CCD81_RS07640 PF02163 Peptidase family M50 CCD81_RS07670 PF13417 Glutathione S-transferase, N-terminal domain CCD81_RS07670 PF04399 Glutaredoxin 2, C terminal domain CCD81_RS07675 PF13291 ACT domain CCD81_RS07675 PF04607 Region found in RelA / SpoT proteins CCD81_RS07675 PF02824 TGS domain CCD81_RS07685 PF02321 Outer membrane efflux protein CCD81_RS07770 PF08241 Methyltransferase domain CCD81_RS07775 PF04301 Protein of unknown function (DUF452) CCD81_RS07780 PF00155 Aminotransferase class I and II CCD81_RS07785 PF05958 tRNA (Uracil-5-)-methyltransferase CCD81_RS07790 PF03734 L,D-transpeptidase catalytic domain CCD81_RS07790 PF01476 LysM domain CCD81_RS07795 PF00939 Sodium:sulfate symporter transmembrane region CCD81_RS07800 PF00491 Arginase family CCD81_RS07805 PF17810 Arginine decarboxylase helical bundle domain CCD81_RS07805 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CCD81_RS07805 PF17944 Arginine decarboxylase C-terminal helical extension CCD81_RS07815 PF01336 OB-fold nucleic acid binding domain CCD81_RS07815 PF02938 GAD domain CCD81_RS07815 PF00152 tRNA synthetases class II (D, K and N) CCD81_RS07825 PF02253 Phospholipase A1 CCD81_RS07830 PF01649 Ribosomal protein S20 CCD81_RS07835 PF13416 Bacterial extracellular solute-binding protein CCD81_RS07840 PF07715 TonB-dependent Receptor Plug Domain CCD81_RS07840 PF00593 TonB dependent receptor CCD81_RS07845 PF17484 N-Lobe handle Tf-binding protein B CCD81_RS07845 PF17483 C-lobe handle domain of Tf-binding protein B CCD81_RS07845 PF01298 C-lobe and N-lobe beta barrels of Tf-binding protein B CCD81_RS07875 PF02661 Fic/DOC family CCD81_RS07875 PF13784 Fic/DOC family N-terminal CCD81_RS07885 PF01177 Asp/Glu/Hydantoin racemase CCD81_RS07895 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CCD81_RS07900 PF01520 N-acetylmuramoyl-L-alanine amidase CCD81_RS07900 PF11741 AMIN domain CCD81_RS07910 PF02926 THUMP domain CCD81_RS07910 PF01170 Putative RNA methylase family UPF0020 CCD81_RS07920 PF00293 NUDIX domain CCD81_RS07925 PF01648 4'-phosphopantetheinyl transferase superfamily CCD81_RS07945 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CCD81_RS07950 PF02565 Recombination protein O C terminal CCD81_RS07950 PF11967 Recombination protein O N terminal CCD81_RS07955 PF01817 Chorismate mutase type II CCD81_RS07955 PF01842 ACT domain CCD81_RS07955 PF00800 Prephenate dehydratase CCD81_RS07960 PF07690 Major Facilitator Superfamily CCD81_RS07970 PF00892 EamA-like transporter family CCD81_RS07975 PF02462 Opacity family porin protein CCD81_RS07990 PF00795 Carbon-nitrogen hydrolase CCD81_RS07995 PF01842 ACT domain CCD81_RS07995 PF02153 Prephenate dehydrogenase CCD81_RS08015 PF02082 Transcriptional regulator CCD81_RS08020 PF01300 Telomere recombination CCD81_RS08025 PF00871 Acetokinase family CCD81_RS08030 PF04303 PrpF protein CCD81_RS08035 PF00330 Aconitase family (aconitate hydratase) CCD81_RS08035 PF00694 Aconitase C-terminal domain CCD81_RS08040 PF01925 Sulfite exporter TauE/SafE CCD81_RS08045 PF00285 Citrate synthase, C-terminal domain CCD81_RS08060 PF00860 Permease family CCD81_RS08070 PF00091 Tubulin/FtsZ family, GTPase domain CCD81_RS08070 PF12327 FtsZ family, C-terminal domain CCD81_RS08075 PF02491 SHS2 domain inserted in FTSA CCD81_RS08080 PF08478 POTRA domain, FtsQ-type CCD81_RS08080 PF03799 Cell division protein FtsQ CCD81_RS08085 PF07478 D-ala D-ala ligase C-terminus CCD81_RS08085 PF01820 D-ala D-ala ligase N-terminus CCD81_RS08090 PF08245 Mur ligase middle domain CCD81_RS08090 PF02875 Mur ligase family, glutamate ligase domain CCD81_RS08090 PF01225 Mur ligase family, catalytic domain CCD81_RS08095 PF04101 Glycosyltransferase family 28 C-terminal domain CCD81_RS08095 PF03033 Glycosyltransferase family 28 N-terminal domain CCD81_RS08100 PF01098 Cell cycle protein CCD81_RS08110 PF02875 Mur ligase family, glutamate ligase domain CCD81_RS08110 PF08245 Mur ligase middle domain CCD81_RS08120 PF00953 Glycosyl transferase family 4 CCD81_RS08130 PF01225 Mur ligase family, catalytic domain CCD81_RS08130 PF02875 Mur ligase family, glutamate ligase domain CCD81_RS08130 PF08245 Mur ligase middle domain CCD81_RS08135 PF00884 Sulfatase CCD81_RS08140 PF01225 Mur ligase family, catalytic domain CCD81_RS08140 PF02875 Mur ligase family, glutamate ligase domain CCD81_RS08140 PF08245 Mur ligase middle domain CCD81_RS08145 PF00905 Penicillin binding protein transpeptidase domain CCD81_RS08145 PF03717 Penicillin-binding Protein dimerisation domain CCD81_RS08150 PF04999 Cell division protein FtsL CCD81_RS08155 PF01795 MraW methylase family CCD81_RS08160 PF02381 MraZ protein, putative antitoxin-like CCD81_RS08180 PF02673 Bacitracin resistance protein BacA CCD81_RS08185 PF01323 DSBA-like thioredoxin domain CCD81_RS08195 PF01078 Magnesium chelatase, subunit ChlI CCD81_RS08195 PF13335 Magnesium chelatase, subunit ChlI C-terminal CCD81_RS08200 PF04380 Membrane fusogenic activity CCD81_RS08210 PF00474 Sodium:solute symporter family CCD81_RS08220 PF00171 Aldehyde dehydrogenase family CCD81_RS08220 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CCD81_RS08220 PF14850 DNA-binding domain of Proline dehydrogenase CCD81_RS08220 PF01619 Proline dehydrogenase CCD81_RS08245 PF03372 Endonuclease/Exonuclease/phosphatase family CCD81_RS08250 PF01022 Bacterial regulatory protein, arsR family CCD81_RS08260 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CCD81_RS08260 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CCD81_RS08270 PF02445 Quinolinate synthetase A protein CCD81_RS08275 PF00890 FAD binding domain CCD81_RS08280 PF13419 Haloacid dehalogenase-like hydrolase CCD81_RS08285 PF03632 Glycosyl hydrolase family 65 central catalytic domain CCD81_RS08285 PF03633 Glycosyl hydrolase family 65, C-terminal domain CCD81_RS08285 PF03636 Glycosyl hydrolase family 65, N-terminal domain CCD81_RS08290 PF01263 Aldose 1-epimerase CCD81_RS08300 PF12848 ABC transporter CCD81_RS08300 PF00005 ABC transporter CCD81_RS08305 PF04608 Phosphatidylglycerophosphatase A CCD81_RS08310 PF02769 AIR synthase related protein, C-terminal domain CCD81_RS08310 PF00586 AIR synthase related protein, N-terminal domain CCD81_RS08325 PF00691 OmpA family CCD81_RS08335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCD81_RS08335 PF03466 LysR substrate binding domain CCD81_RS08340 PF00027 Cyclic nucleotide-binding domain CCD81_RS08340 PF13545 Crp-like helix-turn-helix domain CCD81_RS08345 PF06969 HemN C-terminal domain CCD81_RS08345 PF04055 Radical SAM superfamily CCD81_RS08355 PF01384 Phosphate transporter family CCD81_RS08365 PF03702 Anhydro-N-acetylmuramic acid kinase CCD81_RS08430 PF06594 Haemolysin-type calcium binding protein related domain CCD81_RS08430 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) CCD81_RS08445 PF01541 GIY-YIG catalytic domain CCD81_RS08450 PF07690 Major Facilitator Superfamily CCD81_RS08455 PF00120 Glutamine synthetase, catalytic domain CCD81_RS08455 PF03951 Glutamine synthetase, beta-Grasp domain CCD81_RS08465 PF01488 Shikimate / quinate 5-dehydrogenase CCD81_RS08465 PF08501 Shikimate dehydrogenase substrate binding domain CCD81_RS08465 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CCD81_RS08470 PF00912 Transglycosylase CCD81_RS08480 PF12399 Branched-chain amino acid ATP-binding cassette transporter CCD81_RS08480 PF00005 ABC transporter CCD81_RS08485 PF03968 OstA-like protein CCD81_RS08500 PF01380 SIS domain CCD81_RS08500 PF00571 CBS domain CCD81_RS08505 PF00923 Transaldolase/Fructose-6-phosphate aldolase CCD81_RS08515 PF00749 tRNA synthetases class I (E and Q), catalytic domain CCD81_RS08520 PF01207 Dihydrouridine synthase (Dus) CCD81_RS08525 PF02580 D-Tyr-tRNA(Tyr) deacylase CCD81_RS08545 PF03795 YCII-related domain CCD81_RS08550 PF04279 Intracellular septation protein A CCD81_RS08565 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CCD81_RS08570 PF18073 Rubredoxin metal binding domain CCD81_RS08585 PF01063 Amino-transferase class IV CCD81_RS08595 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CCD81_RS08595 PF14602 Hexapeptide repeat of succinyl-transferase CCD81_RS08605 PF00342 Phosphoglucose isomerase CCD81_RS08610 PF00482 Type II secretion system (T2SS), protein F CCD81_RS08615 PF06750 Bacterial Peptidase A24 N-terminal domain CCD81_RS08615 PF01478 Type IV leader peptidase family CCD81_RS08620 PF01121 Dephospho-CoA kinase CCD81_RS08625 PF03884 DNA gyrase inhibitor YacG CCD81_RS08630 PF00437 Type II/IV secretion system protein CCD81_RS08630 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CCD81_RS08650 PF04284 Protein of unknown function (DUF441) CCD81_RS08655 PF00348 Polyprenyl synthetase CCD81_RS08665 PF00829 Ribosomal prokaryotic L21 protein CCD81_RS08670 PF01016 Ribosomal L27 protein CCD81_RS08675 PF01494 FAD binding domain CCD81_RS08685 PF00471 Ribosomal protein L33 CCD81_RS08690 PF00830 Ribosomal L28 family CCD81_RS08700 PF07690 Major Facilitator Superfamily CCD81_RS08705 PF13533 Biotin-lipoyl like CCD81_RS08715 PF14489 QueF-like protein CCD81_RS08720 PF02592 Putative vitamin uptake transporter CCD81_RS08725 PF08525 Opacity-associated protein A N-terminal motif CCD81_RS08725 PF01551 Peptidase family M23 CCD81_RS08725 PF01476 LysM domain CCD81_RS08735 PF04575 Protein of unknown function (DUF560) CCD81_RS08760 PF03653 Uncharacterised protein family (UPF0093) CCD81_RS08765 PF01928 CYTH domain CCD81_RS08770 PF00186 Dihydrofolate reductase CCD81_RS08775 PF00793 DAHP synthetase I family CCD81_RS08800 PF12762 ISXO2-like transposase domain CCD81_RS08810 PF10531 SLBB domain CCD81_RS08850 PF00448 SRP54-type protein, GTPase domain CCD81_RS08850 PF02881 SRP54-type protein, helical bundle domain CCD81_RS08850 PF02978 Signal peptide binding domain CCD81_RS08855 PF01323 DSBA-like thioredoxin domain CCD81_RS08855 PF00085 Thioredoxin CCD81_RS08875 PF07715 TonB-dependent Receptor Plug Domain CCD81_RS08875 PF00593 TonB dependent receptor CCD81_RS08885 PF07681 DoxX CCD81_RS08890 PF03466 LysR substrate binding domain CCD81_RS08890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCD81_RS08895 PF03441 FAD binding domain of DNA photolyase CCD81_RS08895 PF00875 DNA photolyase CCD81_RS08905 PF06733 DEAD_2 CCD81_RS08905 PF13307 Helicase C-terminal domain CCD81_RS08915 PF01757 Acyltransferase family CCD81_RS08920 PF08328 Adenylosuccinate lyase C-terminal CCD81_RS08920 PF00206 Lyase CCD81_RS08925 PF03641 Possible lysine decarboxylase CCD81_RS08930 PF00773 RNB domain CCD81_RS08950 PF09312 SurA N-terminal domain CCD81_RS08950 PF00639 PPIC-type PPIASE domain CCD81_RS08955 PF04453 LPS transport system D CCD81_RS08960 PF01636 Phosphotransferase enzyme family CCD81_RS08965 PF01323 DSBA-like thioredoxin domain CCD81_RS08965 PF00085 Thioredoxin CCD81_RS08975 PF03023 Lipid II flippase MurJ CCD81_RS08985 PF00218 Indole-3-glycerol phosphate synthase CCD81_RS08990 PF09382 RQC domain CCD81_RS08990 PF16124 RecQ zinc-binding CCD81_RS08990 PF00570 HRDC domain CCD81_RS08990 PF00271 Helicase conserved C-terminal domain CCD81_RS08990 PF00270 DEAD/DEAH box helicase CCD81_RS09015 PF08241 Methyltransferase domain CCD81_RS09020 PF00561 alpha/beta hydrolase fold CCD81_RS09025 PF00156 Phosphoribosyl transferase domain CCD81_RS09030 PF00588 SpoU rRNA Methylase family CCD81_RS09040 PF03330 Lytic transglycolase CCD81_RS09040 PF05036 Sporulation related domain CCD81_RS09050 PF07499 RuvA, C-terminal domain CCD81_RS09050 PF01330 RuvA N terminal domain CCD81_RS09060 PF00664 ABC transporter transmembrane region CCD81_RS09060 PF00005 ABC transporter CCD81_RS09065 PF03193 RsgA GTPase CCD81_RS09075 PF02609 Exonuclease VII small subunit CCD81_RS09080 PF00348 Polyprenyl synthetase CCD81_RS09090 PF00361 Proton-conducting membrane transporter CCD81_RS09095 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus CCD81_RS09095 PF00361 Proton-conducting membrane transporter CCD81_RS09105 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CCD81_RS09105 PF00361 Proton-conducting membrane transporter CCD81_RS09115 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CCD81_RS09120 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CCD81_RS09125 PF12838 4Fe-4S dicluster domain CCD81_RS09130 PF00146 NADH dehydrogenase CCD81_RS09135 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CCD81_RS09135 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal CCD81_RS09135 PF00384 Molybdopterin oxidoreductase CCD81_RS09145 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CCD81_RS09145 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CCD81_RS09145 PF10531 SLBB domain CCD81_RS09155 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CCD81_RS09160 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CCD81_RS09165 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CCD81_RS09170 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CCD81_RS09180 PF17284 Spermidine synthase tetramerisation domain CCD81_RS09190 PF12762 ISXO2-like transposase domain CCD81_RS09215 PF00580 UvrD/REP helicase N-terminal domain CCD81_RS09215 PF13361 UvrD-like helicase C-terminal domain CCD81_RS09225 PF02682 Carboxyltransferase domain, subdomain C and D CCD81_RS09230 PF02626 Carboxyltransferase domain, subdomain A and B CCD81_RS09235 PF03746 LamB/YcsF family CCD81_RS09240 PF01566 Natural resistance-associated macrophage protein CCD81_RS09255 PF08335 GlnD PII-uridylyltransferase CCD81_RS09255 PF03710 Glutamate-ammonia ligase adenylyltransferase CCD81_RS09285 PF01180 Dihydroorotate dehydrogenase CCD81_RS09290 PF00550 Phosphopantetheine attachment site CCD81_RS09295 PF00109 Beta-ketoacyl synthase, N-terminal domain CCD81_RS09295 PF02801 Beta-ketoacyl synthase, C-terminal domain CCD81_RS09300 PF01758 Sodium Bile acid symporter family CCD81_RS09315 PF04963 Sigma-54 factor, core binding domain CCD81_RS09315 PF00309 Sigma-54 factor, Activator interacting domain (AID) CCD81_RS09315 PF04552 Sigma-54, DNA binding domain CCD81_RS09320 PF06628 Catalase-related immune-responsive CCD81_RS09320 PF00199 Catalase CCD81_RS09345 PF02659 Putative manganese efflux pump CCD81_RS09355 PF01432 Peptidase family M3 CCD81_RS09370 PF00204 DNA gyrase B CCD81_RS09370 PF18053 DNA gyrase B subunit insert domain CCD81_RS09370 PF00986 DNA gyrase B subunit, carboxyl terminus CCD81_RS09370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCD81_RS09370 PF01751 Toprim domain CCD81_RS09375 PF03313 Serine dehydratase alpha chain CCD81_RS09375 PF03315 Serine dehydratase beta chain CCD81_RS09410 PF02254 TrkA-N domain CCD81_RS09410 PF02080 TrkA-C domain CCD81_RS09410 PF00999 Sodium/hydrogen exchanger family CCD81_RS09415 PF04060 Putative Fe-S cluster CCD81_RS09420 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CCD81_RS09420 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CCD81_RS09425 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CCD81_RS09430 PF01475 Ferric uptake regulator family CCD81_RS09435 PF04355 SmpA / OmlA family CCD81_RS09440 PF05173 Dihydrodipicolinate reductase, C-terminus CCD81_RS09440 PF01113 Dihydrodipicolinate reductase, N-terminus CCD81_RS09460 PF02684 Lipid-A-disaccharide synthetase CCD81_RS09465 PF00849 RNA pseudouridylate synthase CCD81_RS09465 PF01479 S4 domain CCD81_RS09475 PF12111 Polyribonucleotide phosphorylase C terminal CCD81_RS09475 PF00575 S1 RNA binding domain CCD81_RS09475 PF10150 Ribonuclease E/G family CCD81_RS09480 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CCD81_RS09485 PF01235 Sodium:alanine symporter family CCD81_RS09495 PF01134 Glucose inhibited division protein A CCD81_RS09495 PF13932 GidA associated domain CCD81_RS09500 PF01351 Ribonuclease HII CCD81_RS09510 PF13614 AAA domain CCD81_RS09515 PF02527 rRNA small subunit methyltransferase G CCD81_RS09540 PF01765 Ribosome recycling factor CCD81_RS09545 PF01255 Putative undecaprenyl diphosphate synthase CCD81_RS09555 PF13288 DXP reductoisomerase C-terminal domain CCD81_RS09555 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CCD81_RS09555 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CCD81_RS09560 PF02163 Peptidase family M50 CCD81_RS09560 PF17820 PDZ domain CCD81_RS09565 PF07244 Surface antigen variable number repeat CCD81_RS09565 PF01103 Surface antigen CCD81_RS09575 PF00132 Bacterial transferase hexapeptide (six repeats) CCD81_RS09575 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CCD81_RS09580 PF07977 FabA-like domain CCD81_RS09590 PF00132 Bacterial transferase hexapeptide (six repeats) CCD81_RS09590 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CCD81_RS09595 PF01235 Sodium:alanine symporter family CCD81_RS09600 PF01266 FAD dependent oxidoreductase CCD81_RS09605 PF02535 ZIP Zinc transporter CCD81_RS09610 PF10458 Valyl tRNA synthetase tRNA binding arm CCD81_RS09610 PF00133 tRNA synthetases class I (I, L, M and V) CCD81_RS09610 PF08264 Anticodon-binding domain of tRNA CCD81_RS09620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCD81_RS09620 PF03466 LysR substrate binding domain CCD81_RS09625 PF03776 Septum formation topological specificity factor MinE CCD81_RS09630 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CCD81_RS09635 PF05209 Septum formation inhibitor MinC, N-terminal domain CCD81_RS09635 PF03775 Septum formation inhibitor MinC, C-terminal domain CCD81_RS09640 PF01196 Ribosomal protein L17 CCD81_RS09645 PF01000 RNA polymerase Rpb3/RpoA insert domain CCD81_RS09645 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CCD81_RS09645 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CCD81_RS09650 PF01479 S4 domain CCD81_RS09650 PF00163 Ribosomal protein S4/S9 N-terminal domain CCD81_RS09655 PF00411 Ribosomal protein S11 CCD81_RS09660 PF00416 Ribosomal protein S13/S18 CCD81_RS09665 PF00444 Ribosomal protein L36 CCD81_RS09670 PF01176 Translation initiation factor 1A / IF-1 CCD81_RS09675 PF00344 SecY translocase CCD81_RS09680 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CCD81_RS09685 PF00327 Ribosomal protein L30p/L7e CCD81_RS09690 PF03719 Ribosomal protein S5, C-terminal domain CCD81_RS09690 PF00333 Ribosomal protein S5, N-terminal domain CCD81_RS09695 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CCD81_RS09700 PF00347 Ribosomal protein L6 CCD81_RS09705 PF00410 Ribosomal protein S8 CCD81_RS09710 PF00253 Ribosomal protein S14p/S29e CCD81_RS09715 PF00281 Ribosomal protein L5 CCD81_RS09715 PF00673 ribosomal L5P family C-terminus CCD81_RS09720 PF00467 KOW motif CCD81_RS09720 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CCD81_RS09725 PF00238 Ribosomal protein L14p/L23e CCD81_RS09730 PF00366 Ribosomal protein S17 CCD81_RS09735 PF00831 Ribosomal L29 protein CCD81_RS09740 PF00252 Ribosomal protein L16p/L10e CCD81_RS09745 PF07650 KH domain CCD81_RS09745 PF00189 Ribosomal protein S3, C-terminal domain CCD81_RS09750 PF00237 Ribosomal protein L22p/L17e CCD81_RS09755 PF00203 Ribosomal protein S19 CCD81_RS09760 PF00181 Ribosomal Proteins L2, RNA binding domain CCD81_RS09760 PF03947 Ribosomal Proteins L2, C-terminal domain CCD81_RS09765 PF00276 Ribosomal protein L23 CCD81_RS09770 PF00573 Ribosomal protein L4/L1 family CCD81_RS09775 PF00297 Ribosomal protein L3 CCD81_RS09785 PF00338 Ribosomal protein S10p/S20e CCD81_RS09790 PF00009 Elongation factor Tu GTP binding domain CCD81_RS09790 PF03143 Elongation factor Tu C-terminal domain CCD81_RS09790 PF03144 Elongation factor Tu domain 2 CCD81_RS09795 PF00679 Elongation factor G C-terminus CCD81_RS09795 PF03764 Elongation factor G, domain IV CCD81_RS09795 PF03144 Elongation factor Tu domain 2 CCD81_RS09795 PF14492 Elongation Factor G, domain II CCD81_RS09795 PF00009 Elongation factor Tu GTP binding domain CCD81_RS09800 PF00177 Ribosomal protein S7p/S5e CCD81_RS09805 PF00164 Ribosomal protein S12/S23 CCD81_RS09820 PF04998 RNA polymerase Rpb1, domain 5 CCD81_RS09820 PF05000 RNA polymerase Rpb1, domain 4 CCD81_RS09820 PF04983 RNA polymerase Rpb1, domain 3 CCD81_RS09820 PF04997 RNA polymerase Rpb1, domain 1 CCD81_RS09820 PF00623 RNA polymerase Rpb1, domain 2 CCD81_RS09825 PF04560 RNA polymerase Rpb2, domain 7 CCD81_RS09825 PF00562 RNA polymerase Rpb2, domain 6 CCD81_RS09825 PF10385 RNA polymerase beta subunit external 1 domain CCD81_RS09825 PF04561 RNA polymerase Rpb2, domain 2 CCD81_RS09825 PF04563 RNA polymerase beta subunit CCD81_RS09825 PF04565 RNA polymerase Rpb2, domain 3 CCD81_RS09830 PF16320 Ribosomal protein L7/L12 dimerisation domain CCD81_RS09830 PF00542 Ribosomal protein L7/L12 C-terminal domain CCD81_RS09835 PF00466 Ribosomal protein L10 CCD81_RS09845 PF00687 Ribosomal protein L1p/L10e family CCD81_RS09850 PF03946 Ribosomal protein L11, N-terminal domain CCD81_RS09850 PF00298 Ribosomal protein L11, RNA binding domain CCD81_RS09855 PF02357 Transcription termination factor nusG CCD81_RS09855 PF00467 KOW motif CCD81_RS09860 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CCD81_RS09870 PF00009 Elongation factor Tu GTP binding domain CCD81_RS09870 PF03143 Elongation factor Tu C-terminal domain CCD81_RS09870 PF03144 Elongation factor Tu domain 2 CCD81_RS09890 PF00037 4Fe-4S binding domain CCD81_RS09915 PF13368 Topoisomerase C-terminal repeat CCD81_RS09915 PF01131 DNA topoisomerase CCD81_RS09915 PF01751 Toprim domain CCD81_RS09920 PF04361 Protein of unknown function (DUF494) CCD81_RS09925 PF02481 DNA recombination-mediator protein A CCD81_RS09925 PF17782 DprA winged helix domain CCD81_RS09930 PF00072 Response regulator receiver domain CCD81_RS09930 PF02954 Bacterial regulatory protein, Fis family CCD81_RS09930 PF00158 Sigma-54 interaction domain CCD81_RS09935 PF00989 PAS fold CCD81_RS09935 PF00512 His Kinase A (phospho-acceptor) domain CCD81_RS09935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCD81_RS09935 PF00672 HAMP domain CCD81_RS09945 PF01189 16S rRNA methyltransferase RsmB/F CCD81_RS09945 PF01029 NusB family CCD81_RS09950 PF00551 Formyl transferase CCD81_RS09950 PF02911 Formyl transferase, C-terminal domain CCD81_RS09955 PF01327 Polypeptide deformylase CCD81_RS09960 PF01476 LysM domain CCD81_RS09970 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain CCD81_RS09970 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain CCD81_RS09975 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CCD81_RS09975 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CCD81_RS10020 PF01609 Transposase DDE domain CCD81_RS10025 PF00664 ABC transporter transmembrane region CCD81_RS10025 PF03412 Peptidase C39 family CCD81_RS10025 PF00005 ABC transporter CCD81_RS10030 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CCD81_RS10030 PF00529 HlyD membrane-fusion protein of T1SS CCD81_RS10070 PF02887 Pyruvate kinase, alpha/beta domain CCD81_RS10070 PF00224 Pyruvate kinase, barrel domain CCD81_RS10075 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) CCD81_RS10100 PF03616 Sodium/glutamate symporter CCD81_RS10105 PF08238 Sel1 repeat CCD81_RS10110 PF05159 Capsule polysaccharide biosynthesis protein CCD81_RS10115 PF05159 Capsule polysaccharide biosynthesis protein CCD81_RS10135 PF00483 Nucleotidyl transferase CCD81_RS10140 PF16363 GDP-mannose 4,6 dehydratase CCD81_RS10145 PF16363 GDP-mannose 4,6 dehydratase CCD81_RS10150 PF00483 Nucleotidyl transferase CCD81_RS10165 PF00132 Bacterial transferase hexapeptide (six repeats) CCD81_RS10180 PF08666 SAF domain CCD81_RS10180 PF03102 NeuB family CCD81_RS10185 PF02348 Cytidylyltransferase CCD81_RS10190 PF02350 UDP-N-acetylglucosamine 2-epimerase CCD81_RS10195 PF02563 Polysaccharide biosynthesis/export protein CCD81_RS10205 PF01061 ABC-2 type transporter CCD81_RS10210 PF00005 ABC transporter CCD81_RS10215 PF16921 Tex protein YqgF-like domain CCD81_RS10215 PF09371 Tex-like protein N-terminal domain CCD81_RS10215 PF17674 HHH domain CCD81_RS10215 PF00575 S1 RNA binding domain CCD81_RS10225 PF02086 D12 class N6 adenine-specific DNA methyltransferase CCD81_RS10230 PF16363 GDP-mannose 4,6 dehydratase CCD81_RS10235 PF16363 GDP-mannose 4,6 dehydratase CCD81_RS10240 PF00483 Nucleotidyl transferase CCD81_RS10245 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CCD81_RS10250 PF03169 OPT oligopeptide transporter protein CCD81_RS10255 PF00226 DnaJ domain CCD81_RS10255 PF00684 DnaJ central domain CCD81_RS10255 PF01556 DnaJ C terminal domain CCD81_RS10265 PF10531 SLBB domain CCD81_RS10300 PF01258 Prokaryotic dksA/traR C4-type zinc finger CCD81_RS10305 PF03807 NADP oxidoreductase coenzyme F420-dependent CCD81_RS10305 PF14748 Pyrroline-5-carboxylate reductase dimerisation CCD81_RS10315 PF01168 Alanine racemase, N-terminal domain CCD81_RS10320 PF00437 Type II/IV secretion system protein CCD81_RS10325 PF00437 Type II/IV secretion system protein CCD81_RS10330 PF12805 FUSC-like inner membrane protein yccS CCD81_RS10345 PF02881 SRP54-type protein, helical bundle domain CCD81_RS10345 PF00448 SRP54-type protein, GTPase domain CCD81_RS10350 PF08534 Redoxin CCD81_RS10350 PF01641 SelR domain CCD81_RS10350 PF01625 Peptide methionine sulfoxide reductase CCD81_RS10355 PF02464 Competence-damaged protein CCD81_RS10360 PF00924 Mechanosensitive ion channel CCD81_RS10360 PF05552 Conserved TM helix CCD81_RS10380 PF12804 MobA-like NTP transferase domain CCD81_RS10380 PF00132 Bacterial transferase hexapeptide (six repeats) CCD81_RS10380 PF14602 Hexapeptide repeat of succinyl-transferase CCD81_RS10385 PF08274 PhnA Zinc-Ribbon CCD81_RS10385 PF03831 PhnA domain CCD81_RS10390 PF04261 Dyp-type peroxidase family CCD81_RS10395 PF13473 Cupredoxin-like domain CCD81_RS10395 PF09375 Imelysin CCD81_RS10400 PF03239 Iron permease FTR1 family CCD81_RS10420 PF01380 SIS domain CCD81_RS10425 PF08264 Anticodon-binding domain of tRNA CCD81_RS10425 PF01588 Putative tRNA binding domain CCD81_RS10425 PF09334 tRNA synthetases class I (M) CCD81_RS10430 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CCD81_RS10430 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CCD81_RS10440 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CCD81_RS10445 PF00114 Pilin (bacterial filament) CCD81_RS10445 PF07963 Prokaryotic N-terminal methylation motif CCD81_RS10450 PF07963 Prokaryotic N-terminal methylation motif CCD81_RS10450 PF00114 Pilin (bacterial filament) CCD81_RS10455 PF00114 Pilin (bacterial filament) CCD81_RS10455 PF07963 Prokaryotic N-terminal methylation motif CCD81_RS10465 PF00114 Pilin (bacterial filament) CCD81_RS10465 PF07963 Prokaryotic N-terminal methylation motif CCD81_RS10475 PF00114 Pilin (bacterial filament) CCD81_RS10475 PF07963 Prokaryotic N-terminal methylation motif CCD81_RS10485 PF01609 Transposase DDE domain CCD81_RS10490 PF00114 Pilin (bacterial filament) CCD81_RS10490 PF07963 Prokaryotic N-terminal methylation motif CCD81_RS10495 PF07963 Prokaryotic N-terminal methylation motif CCD81_RS10495 PF00114 Pilin (bacterial filament) CCD81_RS10500 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CCD81_RS10515 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CCD81_RS10515 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CCD81_RS10520 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CCD81_RS10530 PF03741 Integral membrane protein TerC family CCD81_RS10540 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CCD81_RS10545 PF00162 Phosphoglycerate kinase CCD81_RS10555 PF18075 FtsX extracellular domain CCD81_RS10560 PF00005 ABC transporter CCD81_RS10570 PF08534 Redoxin CCD81_RS10575 PF03960 ArsC family CCD81_RS10585 PF00749 tRNA synthetases class I (E and Q), catalytic domain CCD81_RS10600 PF05190 MutS family domain IV CCD81_RS10600 PF05192 MutS domain III CCD81_RS10600 PF01624 MutS domain I CCD81_RS10600 PF05188 MutS domain II CCD81_RS10600 PF00488 MutS domain V CCD81_RS10605 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CCD81_RS10605 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CCD81_RS10615 PF18389 TrmO C-terminal domain CCD81_RS10615 PF01980 tRNA-methyltransferase O CCD81_RS10620 PF00857 Isochorismatase family CCD81_RS10625 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CCD81_RS10630 PF01012 Electron transfer flavoprotein domain CCD81_RS10635 PF00766 Electron transfer flavoprotein FAD-binding domain CCD81_RS10635 PF01012 Electron transfer flavoprotein domain CCD81_RS10640 PF01205 Uncharacterized protein family UPF0029 CCD81_RS10640 PF09186 Domain of unknown function (DUF1949) CCD81_RS10650 PF02844 Phosphoribosylglycinamide synthetase, N domain CCD81_RS10650 PF02843 Phosphoribosylglycinamide synthetase, C domain CCD81_RS10650 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CCD81_RS10655 PF01300 Telomere recombination CCD81_RS10660 PF12762 ISXO2-like transposase domain CCD81_RS10690 PF04542 Sigma-70 region 2 CCD81_RS10690 PF08281 Sigma-70, region 4 CCD81_RS10695 PF09836 Putative DNA-binding domain CCD81_RS10700 PF05114 Protein of unknown function (DUF692) CCD81_RS10710 PF07681 DoxX CCD81_RS10715 PF01734 Patatin-like phospholipase CCD81_RS10720 PF03462 PCRF domain CCD81_RS10720 PF00472 RF-1 domain CCD81_RS10735 PF00854 POT family CCD81_RS10755 PF01103 Surface antigen CCD81_RS10755 PF17243 POTRA domain TamA domain 1 CCD81_RS10775 PF00375 Sodium:dicarboxylate symporter family CCD81_RS10795 PF00764 Arginosuccinate synthase CCD81_RS10800 PF18146 Damage-inducible protein CinA KH domain CCD81_RS10800 PF00994 Probable molybdopterin binding domain CCD81_RS10800 PF02464 Competence-damaged protein CCD81_RS10805 PF01343 Peptidase family S49 CCD81_RS10805 PF06965 Na+/H+ antiporter 1 CCD81_RS10945 PF00696 Amino acid kinase family CCD81_RS10950 PF00889 Elongation factor TS CCD81_RS10960 PF00318 Ribosomal protein S2 CCD81_RS10970 PF01812 5-formyltetrahydrofolate cyclo-ligase family CCD81_RS10985 PF06039 Malate:quinone oxidoreductase (Mqo) CCD81_RS11000 PF00557 Metallopeptidase family M24 CCD81_RS11015 PF13580 SIS domain CCD81_RS11020 PF02021 Uncharacterised protein family UPF0102 CCD81_RS11025 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CCD81_RS11030 PF01292 Prokaryotic cytochrome b561 CCD81_RS11045 PF01018 GTP1/OBG CCD81_RS11045 PF01926 50S ribosome-binding GTPase CCD81_RS11055 PF09190 DALR domain CCD81_RS11055 PF01406 tRNA synthetases class I (C) catalytic domain CCD81_RS11060 PF03372 Endonuclease/Exonuclease/phosphatase family CCD81_RS11075 PF01118 Semialdehyde dehydrogenase, NAD binding domain CCD81_RS11075 PF02774 Semialdehyde dehydrogenase, dimerisation domain CCD81_RS11085 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CCD81_RS11085 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CCD81_RS11110 PF01467 Cytidylyltransferase-like CCD81_RS11115 PF03309 Type III pantothenate kinase CCD81_RS11115 PF03099 Biotin/lipoate A/B protein ligase family CCD81_RS11115 PF02237 Biotin protein ligase C terminal domain CCD81_RS11135 PF05690 Thiazole biosynthesis protein ThiG CCD81_RS11155 PF02581 Thiamine monophosphate synthase CCD81_RS11160 PF01266 FAD dependent oxidoreductase CCD81_RS11170 PF01523 Putative modulator of DNA gyrase CCD81_RS11175 PF05175 Methyltransferase small domain CCD81_RS11175 PF17827 PrmC N-terminal domain CCD81_RS11180 PF13726 Na+-H+ antiporter family CCD81_RS11180 PF03553 Na+/H+ antiporter family CCD81_RS11185 PF04102 SlyX CCD81_RS11200 PF00899 ThiF family CCD81_RS11205 PF00311 Phosphoenolpyruvate carboxylase CCD81_RS11210 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CCD81_RS11210 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CCD81_RS11230 PF00572 Ribosomal protein L13 CCD81_RS11235 PF00380 Ribosomal protein S9/S16 CCD81_RS11250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCD81_RS11250 PF03466 LysR substrate binding domain CCD81_RS11255 PF01784 NIF3 (NGG1p interacting factor 3) CCD81_RS11260 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal CCD81_RS11260 PF00355 Rieske [2Fe-2S] domain CCD81_RS11265 PF00033 Cytochrome b/b6/petB CCD81_RS11265 PF00032 Cytochrome b(C-terminal)/b6/petD CCD81_RS11270 PF02167 Cytochrome C1 family CCD81_RS11275 PF02646 RmuC family CCD81_RS11280 PF00753 Metallo-beta-lactamase superfamily CCD81_RS11285 PF01068 ATP dependent DNA ligase domain CCD81_RS11285 PF14743 DNA ligase OB-like domain CCD81_RS11290 PF00156 Phosphoribosyl transferase domain CCD81_RS11300 PF00381 PTS HPr component phosphorylation site CCD81_RS11305 PF05524 PEP-utilising enzyme, N-terminal CCD81_RS11305 PF00391 PEP-utilising enzyme, mobile domain CCD81_RS11305 PF02896 PEP-utilising enzyme, TIM barrel domain CCD81_RS11325 PF08402 TOBE domain CCD81_RS11325 PF00005 ABC transporter CCD81_RS11345 PF01964 Radical SAM ThiC family CCD81_RS11345 PF13667 ThiC-associated domain CCD81_RS11380 PF00267 Gram-negative porin CCD81_RS11405 PF01416 tRNA pseudouridine synthase CCD81_RS11435 PF00534 Glycosyl transferases group 1 CCD81_RS11435 PF13439 Glycosyltransferase Family 4 CCD81_RS11440 PF03222 Tryptophan/tyrosine permease family CCD81_RS11450 PF01636 Phosphotransferase enzyme family CCD81_RS11460 PF02447 GntP family permease CCD81_RS11465 PF00528 Binding-protein-dependent transport system inner membrane component CCD81_RS11470 PF00484 Carbonic anhydrase CCD81_RS11475 PF01467 Cytidylyltransferase-like CCD81_RS11485 PF02590 Predicted SPOUT methyltransferase CCD81_RS11490 PF04362 Bacterial Fe(2+) trafficking CCD81_RS11495 PF01027 Inhibitor of apoptosis-promoting Bax1 CCD81_RS11500 PF01467 Cytidylyltransferase-like CCD81_RS11505 PF00849 RNA pseudouridylate synthase CCD81_RS11535 PF10531 SLBB domain CCD81_RS11540 PF08334 Type II secretion system (T2SS), protein G CCD81_RS11540 PF07963 Prokaryotic N-terminal methylation motif CCD81_RS11565 PF05762 VWA domain containing CoxE-like protein CCD81_RS11570 PF12592 Protein of unknown function (DUF3763) CCD81_RS11570 PF17868 AAA lid domain CCD81_RS11570 PF07728 AAA domain (dynein-related subfamily) CCD81_RS11575 PF11898 Domain of unknown function (DUF3418) CCD81_RS11575 PF04408 Helicase associated domain (HA2) CCD81_RS11575 PF00271 Helicase conserved C-terminal domain CCD81_RS11575 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CCD81_RS11575 PF00270 DEAD/DEAH box helicase CCD81_RS11590 PF04408 Helicase associated domain (HA2) CCD81_RS11590 PF00271 Helicase conserved C-terminal domain CCD81_RS11590 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CCD81_RS11590 PF00270 DEAD/DEAH box helicase CCD81_RS11590 PF11898 Domain of unknown function (DUF3418) CCD81_RS11595 PF00654 Voltage gated chloride channel CCD81_RS11600 PF01960 ArgJ family CCD81_RS11605 PF04172 LrgB-like family CCD81_RS11610 PF03788 LrgA family CCD81_RS11625 PF00877 NlpC/P60 family CCD81_RS11640 PF01609 Transposase DDE domain CCD81_RS11655 PF01769 Divalent cation transporter CCD81_RS11655 PF00571 CBS domain CCD81_RS11655 PF03448 MgtE intracellular N domain CCD81_RS11670 PF16123 Hydroxyacylglutathione hydrolase C-terminus CCD81_RS11670 PF00753 Metallo-beta-lactamase superfamily CCD81_RS11675 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CCD81_RS11675 PF02769 AIR synthase related protein, C-terminal domain CCD81_RS11675 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal CCD81_RS11685 PF00543 Nitrogen regulatory protein P-II CCD81_RS11690 PF00005 ABC transporter CCD81_RS11700 PF01032 FecCD transport family CCD81_RS11705 PF01032 FecCD transport family CCD81_RS11745 PF10396 GTP-binding protein TrmE N-terminus CCD81_RS11745 PF12631 MnmE helical domain CCD81_RS11745 PF01926 50S ribosome-binding GTPase CCD81_RS11755 PF02395 Immunoglobulin A1 protease CCD81_RS11755 PF03212 Pertactin CCD81_RS11760 PF01609 Transposase DDE domain CCD81_RS11770 PF01609 Transposase DDE domain CCD81_RS11780 PF01367 5'-3' exonuclease, C-terminal SAM fold CCD81_RS11780 PF00476 DNA polymerase family A CCD81_RS11780 PF01612 3'-5' exonuclease CCD81_RS11780 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CCD81_RS11785 PF02664 S-Ribosylhomocysteinase (LuxS) CCD81_RS11790 PF10008 Uncharacterized protein conserved in bacteria (DUF2251) CCD81_RS11795 PF03601 Conserved hypothetical protein 698 CCD81_RS11800 PF01491 Frataxin-like domain CCD81_RS11810 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CCD81_RS11810 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CCD81_RS11820 PF00209 Sodium:neurotransmitter symporter family CCD81_RS11835 PF12762 ISXO2-like transposase domain CCD81_RS11840 PF00166 Chaperonin 10 Kd subunit CCD81_RS11845 PF00118 TCP-1/cpn60 chaperonin family CCD81_RS11855 PF07715 TonB-dependent Receptor Plug Domain CCD81_RS11855 PF00593 TonB dependent receptor CCD81_RS11875 PF04575 Protein of unknown function (DUF560) CCD81_RS11880 PF00425 chorismate binding enzyme CCD81_RS11880 PF04715 Anthranilate synthase component I, N terminal region CCD81_RS11880 PF00117 Glutamine amidotransferase class-I CCD81_RS11885 PF00082 Subtilase family CCD81_RS11885 PF03797 Autotransporter beta-domain CCD81_RS11890 PF00171 Aldehyde dehydrogenase family CCD81_RS11910 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term CCD81_RS11910 PF12833 Helix-turn-helix domain CCD81_RS11915 PF00005 ABC transporter CCD81_RS11920 PF02405 Permease MlaE CCD81_RS11925 PF02470 MlaD protein CCD81_RS11930 PF05494 MlaC protein CCD81_RS11960 PF00132 Bacterial transferase hexapeptide (six repeats) CCD81_RS11960 PF12464 Maltose acetyltransferase CCD81_RS11960 PF14602 Hexapeptide repeat of succinyl-transferase CCD81_RS11970 PF01197 Ribosomal protein L31 CCD81_RS11990 PF00043 Glutathione S-transferase, C-terminal domain CCD81_RS11990 PF02798 Glutathione S-transferase, N-terminal domain CCD81_RS11995 PF04386 Stringent starvation protein B CCD81_RS12000 PF09424 Yqey-like protein CCD81_RS12005 PF01165 Ribosomal protein S21 CCD81_RS12010 PF14718 Soluble lytic murein transglycosylase L domain CCD81_RS12010 PF01464 Transglycosylase SLT domain CCD81_RS12015 PF09383 NIL domain CCD81_RS12015 PF00005 ABC transporter CCD81_RS12020 PF00528 Binding-protein-dependent transport system inner membrane component CCD81_RS12025 PF03180 NLPA lipoprotein CCD81_RS12030 PF02441 Flavoprotein CCD81_RS12040 PF02195 ParB-like nuclease domain CCD81_RS12040 PF17762 HTH domain found in ParB protein CCD81_RS12060 PF00119 ATP synthase A chain CCD81_RS12065 PF00137 ATP synthase subunit C CCD81_RS12070 PF00430 ATP synthase B/B' CF(0) CCD81_RS12075 PF00213 ATP synthase delta (OSCP) subunit CCD81_RS12080 PF00306 ATP synthase alpha/beta chain, C terminal domain CCD81_RS12080 PF02874 ATP synthase alpha/beta family, beta-barrel domain CCD81_RS12080 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CCD81_RS12085 PF00231 ATP synthase CCD81_RS12090 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CCD81_RS12090 PF02874 ATP synthase alpha/beta family, beta-barrel domain CCD81_RS12095 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CCD81_RS12095 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CCD81_RS12105 PF02091 Glycyl-tRNA synthetase alpha subunit CCD81_RS12115 PF02092 Glycyl-tRNA synthetase beta subunit CCD81_RS12115 PF05746 DALR anticodon binding domain CCD81_RS12120 PF00535 Glycosyl transferase family 2 CCD81_RS12125 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) CCD81_RS12135 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) CCD81_RS12140 PF04452 RNA methyltransferase CCD81_RS12150 PF00459 Inositol monophosphatase family CCD81_RS12175 PF01609 Transposase DDE domain CCD81_RS12205 PF00117 Glutamine amidotransferase class-I CCD81_RS12205 PF00958 GMP synthase C terminal domain CCD81_RS12205 PF02540 NAD synthase CCD81_RS12210 PF00664 ABC transporter transmembrane region CCD81_RS12210 PF00005 ABC transporter CCD81_RS12215 PF00698 Acyl transferase domain CCD81_RS12225 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CCD81_RS12225 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CCD81_RS12245 PF02504 Fatty acid synthesis protein CCD81_RS12255 PF01783 Ribosomal L32p protein family CCD81_RS12265 PF02545 Maf-like protein CCD81_RS12270 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CCD81_RS12275 PF14849 YidC periplasmic domain CCD81_RS12275 PF02096 60Kd inner membrane protein CCD81_RS12285 PF01809 Putative membrane protein insertion efficiency factor CCD81_RS12290 PF00825 Ribonuclease P CCD81_RS12295 PF00468 Ribosomal protein L34