locus-tag class description DE8555_RS00015 PF00749 tRNA synthetases class I (E and Q), catalytic domain DE8555_RS00025 PF03960 ArsC family DE8555_RS00030 PF08534 Redoxin DE8555_RS00035 PF00005 ABC transporter DE8555_RS00040 PF18075 FtsX extracellular domain DE8555_RS00050 PF00162 Phosphoglycerate kinase DE8555_RS00055 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DE8555_RS00065 PF03741 Integral membrane protein TerC family DE8555_RS00075 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) DE8555_RS00080 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DE8555_RS00080 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DE8555_RS00090 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase DE8555_RS00095 PF00114 Pilin (bacterial filament) DE8555_RS00095 PF07963 Prokaryotic N-terminal methylation motif DE8555_RS00100 PF00114 Pilin (bacterial filament) DE8555_RS00100 PF07963 Prokaryotic N-terminal methylation motif DE8555_RS00105 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DE8555_RS00115 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DE8555_RS00115 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DE8555_RS00120 PF09334 tRNA synthetases class I (M) DE8555_RS00120 PF01588 Putative tRNA binding domain DE8555_RS00120 PF08264 Anticodon-binding domain of tRNA DE8555_RS00125 PF01380 SIS domain DE8555_RS00145 PF03239 Iron permease FTR1 family DE8555_RS00150 PF09375 Imelysin DE8555_RS00150 PF13473 Cupredoxin-like domain DE8555_RS00155 PF04261 Dyp-type peroxidase family DE8555_RS00160 PF03831 PhnA domain DE8555_RS00160 PF08274 PhnA Zinc-Ribbon DE8555_RS00165 PF14602 Hexapeptide repeat of succinyl-transferase DE8555_RS00165 PF00132 Bacterial transferase hexapeptide (six repeats) DE8555_RS00165 PF12804 MobA-like NTP transferase domain DE8555_RS00180 PF05552 Conserved TM helix DE8555_RS00180 PF00924 Mechanosensitive ion channel DE8555_RS00185 PF02464 Competence-damaged protein DE8555_RS00190 PF01641 SelR domain DE8555_RS00190 PF08534 Redoxin DE8555_RS00190 PF01625 Peptide methionine sulfoxide reductase DE8555_RS00195 PF00448 SRP54-type protein, GTPase domain DE8555_RS00195 PF02881 SRP54-type protein, helical bundle domain DE8555_RS00210 PF05567 Neisseria PilC beta-propeller domain DE8555_RS00215 PF12805 FUSC-like inner membrane protein yccS DE8555_RS00220 PF00437 Type II/IV secretion system protein DE8555_RS00225 PF00437 Type II/IV secretion system protein DE8555_RS00230 PF01168 Alanine racemase, N-terminal domain DE8555_RS00240 PF14748 Pyrroline-5-carboxylate reductase dimerisation DE8555_RS00240 PF03807 NADP oxidoreductase coenzyme F420-dependent DE8555_RS00245 PF01258 Prokaryotic dksA/traR C4-type zinc finger DE8555_RS00280 PF10531 SLBB domain DE8555_RS00290 PF00684 DnaJ central domain DE8555_RS00290 PF00226 DnaJ domain DE8555_RS00290 PF01556 DnaJ C terminal domain DE8555_RS00295 PF03169 OPT oligopeptide transporter protein DE8555_RS00300 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DE8555_RS00305 PF00483 Nucleotidyl transferase DE8555_RS00310 PF16363 GDP-mannose 4,6 dehydratase DE8555_RS00315 PF16363 GDP-mannose 4,6 dehydratase DE8555_RS00335 PF03102 NeuB family DE8555_RS00335 PF08666 SAF domain DE8555_RS00340 PF02348 Cytidylyltransferase DE8555_RS00345 PF02350 UDP-N-acetylglucosamine 2-epimerase DE8555_RS00350 PF02563 Polysaccharide biosynthesis/export protein DE8555_RS00360 PF01061 ABC-2 type transporter DE8555_RS00365 PF00005 ABC transporter DE8555_RS00370 PF17674 HHH domain DE8555_RS00370 PF00575 S1 RNA binding domain DE8555_RS00370 PF09371 Tex-like protein N-terminal domain DE8555_RS00370 PF16921 Tex protein YqgF-like domain DE8555_RS00375 PF00145 C-5 cytosine-specific DNA methylase DE8555_RS00380 PF02086 D12 class N6 adenine-specific DNA methyltransferase DE8555_RS00385 PF16363 GDP-mannose 4,6 dehydratase DE8555_RS00390 PF16363 GDP-mannose 4,6 dehydratase DE8555_RS00395 PF00483 Nucleotidyl transferase DE8555_RS00400 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DE8555_RS00405 PF05159 Capsule polysaccharide biosynthesis protein DE8555_RS00410 PF05159 Capsule polysaccharide biosynthesis protein DE8555_RS00415 PF08238 Sel1 repeat DE8555_RS00420 PF03616 Sodium/glutamate symporter DE8555_RS00440 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) DE8555_RS00450 PF02887 Pyruvate kinase, alpha/beta domain DE8555_RS00450 PF00224 Pyruvate kinase, barrel domain DE8555_RS00490 PF00529 HlyD membrane-fusion protein of T1SS DE8555_RS00490 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DE8555_RS00495 PF03412 Peptidase C39 family DE8555_RS00495 PF00664 ABC transporter transmembrane region DE8555_RS00495 PF00005 ABC transporter DE8555_RS00550 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DE8555_RS00550 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DE8555_RS00555 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain DE8555_RS00555 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain DE8555_RS00565 PF01476 LysM domain DE8555_RS00575 PF01327 Polypeptide deformylase DE8555_RS00580 PF02911 Formyl transferase, C-terminal domain DE8555_RS00580 PF00551 Formyl transferase DE8555_RS00585 PF01029 NusB family DE8555_RS00585 PF01189 16S rRNA methyltransferase RsmB/F DE8555_RS00595 PF00672 HAMP domain DE8555_RS00595 PF00512 His Kinase A (phospho-acceptor) domain DE8555_RS00595 PF00989 PAS fold DE8555_RS00595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DE8555_RS00600 PF00158 Sigma-54 interaction domain DE8555_RS00600 PF00072 Response regulator receiver domain DE8555_RS00600 PF02954 Bacterial regulatory protein, Fis family DE8555_RS00605 PF17782 DprA winged helix domain DE8555_RS00605 PF02481 DNA recombination-mediator protein A DE8555_RS00610 PF04361 Protein of unknown function (DUF494) DE8555_RS00615 PF01131 DNA topoisomerase DE8555_RS00615 PF01751 Toprim domain DE8555_RS00615 PF13368 Topoisomerase C-terminal repeat DE8555_RS00640 PF00037 4Fe-4S binding domain DE8555_RS00660 PF00009 Elongation factor Tu GTP binding domain DE8555_RS00660 PF03144 Elongation factor Tu domain 2 DE8555_RS00660 PF03143 Elongation factor Tu C-terminal domain DE8555_RS00670 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DE8555_RS00675 PF00467 KOW motif DE8555_RS00675 PF02357 Transcription termination factor nusG DE8555_RS00680 PF03946 Ribosomal protein L11, N-terminal domain DE8555_RS00680 PF00298 Ribosomal protein L11, RNA binding domain DE8555_RS00685 PF00687 Ribosomal protein L1p/L10e family DE8555_RS00695 PF00466 Ribosomal protein L10 DE8555_RS00700 PF00542 Ribosomal protein L7/L12 C-terminal domain DE8555_RS00700 PF16320 Ribosomal protein L7/L12 dimerisation domain DE8555_RS00705 PF04560 RNA polymerase Rpb2, domain 7 DE8555_RS00705 PF04563 RNA polymerase beta subunit DE8555_RS00705 PF04565 RNA polymerase Rpb2, domain 3 DE8555_RS00705 PF10385 RNA polymerase beta subunit external 1 domain DE8555_RS00705 PF00562 RNA polymerase Rpb2, domain 6 DE8555_RS00705 PF04561 RNA polymerase Rpb2, domain 2 DE8555_RS00710 PF04983 RNA polymerase Rpb1, domain 3 DE8555_RS00710 PF05000 RNA polymerase Rpb1, domain 4 DE8555_RS00710 PF00623 RNA polymerase Rpb1, domain 2 DE8555_RS00710 PF04998 RNA polymerase Rpb1, domain 5 DE8555_RS00710 PF04997 RNA polymerase Rpb1, domain 1 DE8555_RS00715 PF00164 Ribosomal protein S12/S23 DE8555_RS00720 PF00177 Ribosomal protein S7p/S5e DE8555_RS00725 PF00679 Elongation factor G C-terminus DE8555_RS00725 PF14492 Elongation Factor G, domain II DE8555_RS00725 PF03764 Elongation factor G, domain IV DE8555_RS00725 PF00009 Elongation factor Tu GTP binding domain DE8555_RS00725 PF03144 Elongation factor Tu domain 2 DE8555_RS00730 PF03143 Elongation factor Tu C-terminal domain DE8555_RS00730 PF00009 Elongation factor Tu GTP binding domain DE8555_RS00730 PF03144 Elongation factor Tu domain 2 DE8555_RS00735 PF00338 Ribosomal protein S10p/S20e DE8555_RS00740 PF01609 Transposase DDE domain DE8555_RS00745 PF00297 Ribosomal protein L3 DE8555_RS00750 PF00573 Ribosomal protein L4/L1 family DE8555_RS00755 PF00276 Ribosomal protein L23 DE8555_RS00760 PF00181 Ribosomal Proteins L2, RNA binding domain DE8555_RS00760 PF03947 Ribosomal Proteins L2, C-terminal domain DE8555_RS00765 PF00203 Ribosomal protein S19 DE8555_RS00770 PF00237 Ribosomal protein L22p/L17e DE8555_RS00775 PF00189 Ribosomal protein S3, C-terminal domain DE8555_RS00775 PF07650 KH domain DE8555_RS00780 PF00252 Ribosomal protein L16p/L10e DE8555_RS00785 PF00831 Ribosomal L29 protein DE8555_RS00790 PF00366 Ribosomal protein S17 DE8555_RS00795 PF00238 Ribosomal protein L14p/L23e DE8555_RS00800 PF00467 KOW motif DE8555_RS00800 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DE8555_RS00805 PF00281 Ribosomal protein L5 DE8555_RS00805 PF00673 ribosomal L5P family C-terminus DE8555_RS00810 PF00253 Ribosomal protein S14p/S29e DE8555_RS00815 PF00410 Ribosomal protein S8 DE8555_RS00820 PF00347 Ribosomal protein L6 DE8555_RS00825 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DE8555_RS00830 PF03719 Ribosomal protein S5, C-terminal domain DE8555_RS00830 PF00333 Ribosomal protein S5, N-terminal domain DE8555_RS00835 PF00327 Ribosomal protein L30p/L7e DE8555_RS00840 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DE8555_RS00845 PF00344 SecY translocase DE8555_RS00850 PF01176 Translation initiation factor 1A / IF-1 DE8555_RS00855 PF00444 Ribosomal protein L36 DE8555_RS00860 PF00416 Ribosomal protein S13/S18 DE8555_RS00865 PF00411 Ribosomal protein S11 DE8555_RS00870 PF01479 S4 domain DE8555_RS00870 PF00163 Ribosomal protein S4/S9 N-terminal domain DE8555_RS00875 PF01000 RNA polymerase Rpb3/RpoA insert domain DE8555_RS00875 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DE8555_RS00875 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DE8555_RS00880 PF01196 Ribosomal protein L17 DE8555_RS00885 PF03775 Septum formation inhibitor MinC, C-terminal domain DE8555_RS00885 PF05209 Septum formation inhibitor MinC, N-terminal domain DE8555_RS00890 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DE8555_RS00895 PF03776 Septum formation topological specificity factor MinE DE8555_RS00900 PF03466 LysR substrate binding domain DE8555_RS00900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DE8555_RS00910 PF08264 Anticodon-binding domain of tRNA DE8555_RS00910 PF10458 Valyl tRNA synthetase tRNA binding arm DE8555_RS00910 PF00133 tRNA synthetases class I (I, L, M and V) DE8555_RS00915 PF02535 ZIP Zinc transporter DE8555_RS00920 PF01266 FAD dependent oxidoreductase DE8555_RS00925 PF01235 Sodium:alanine symporter family DE8555_RS00930 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DE8555_RS00930 PF00132 Bacterial transferase hexapeptide (six repeats) DE8555_RS00940 PF07977 FabA-like domain DE8555_RS00945 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD DE8555_RS00945 PF00132 Bacterial transferase hexapeptide (six repeats) DE8555_RS00955 PF01103 Surface antigen DE8555_RS00955 PF07244 Surface antigen variable number repeat DE8555_RS00960 PF02163 Peptidase family M50 DE8555_RS00960 PF17820 PDZ domain DE8555_RS00965 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DE8555_RS00965 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DE8555_RS00965 PF13288 DXP reductoisomerase C-terminal domain DE8555_RS00975 PF01255 Putative undecaprenyl diphosphate synthase DE8555_RS00980 PF01765 Ribosome recycling factor DE8555_RS01000 PF02527 rRNA small subunit methyltransferase G DE8555_RS01005 PF13614 AAA domain DE8555_RS01015 PF01351 Ribonuclease HII DE8555_RS01020 PF01134 Glucose inhibited division protein A DE8555_RS01020 PF13932 GidA associated domain DE8555_RS01025 PF01235 Sodium:alanine symporter family DE8555_RS01030 PF04166 Pyridoxal phosphate biosynthetic protein PdxA DE8555_RS01035 PF00575 S1 RNA binding domain DE8555_RS01035 PF10150 Ribonuclease E/G family DE8555_RS01035 PF12111 Polyribonucleotide phosphorylase C terminal DE8555_RS01045 PF00849 RNA pseudouridylate synthase DE8555_RS01045 PF01479 S4 domain DE8555_RS01050 PF02684 Lipid-A-disaccharide synthetase DE8555_RS01070 PF05173 Dihydrodipicolinate reductase, C-terminus DE8555_RS01070 PF01113 Dihydrodipicolinate reductase, N-terminus DE8555_RS01075 PF04355 SmpA / OmlA family DE8555_RS01080 PF01475 Ferric uptake regulator family DE8555_RS01085 PF03588 Leucyl/phenylalanyl-tRNA protein transferase DE8555_RS01090 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DE8555_RS01090 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DE8555_RS01095 PF04060 Putative Fe-S cluster DE8555_RS01100 PF00999 Sodium/hydrogen exchanger family DE8555_RS01100 PF02254 TrkA-N domain DE8555_RS01100 PF02080 TrkA-C domain DE8555_RS01135 PF03315 Serine dehydratase beta chain DE8555_RS01135 PF03313 Serine dehydratase alpha chain DE8555_RS01140 PF03315 Serine dehydratase beta chain DE8555_RS01140 PF03313 Serine dehydratase alpha chain DE8555_RS01145 PF00986 DNA gyrase B subunit, carboxyl terminus DE8555_RS01145 PF01751 Toprim domain DE8555_RS01145 PF00204 DNA gyrase B DE8555_RS01145 PF18053 DNA gyrase B subunit insert domain DE8555_RS01145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DE8555_RS01155 PF01432 Peptidase family M3 DE8555_RS01160 PF02659 Putative manganese efflux pump DE8555_RS01165 PF01797 Transposase IS200 like DE8555_RS01170 PF00114 Pilin (bacterial filament) DE8555_RS01170 PF07963 Prokaryotic N-terminal methylation motif DE8555_RS01180 PF00199 Catalase DE8555_RS01180 PF06628 Catalase-related immune-responsive DE8555_RS01185 PF04552 Sigma-54, DNA binding domain DE8555_RS01185 PF04963 Sigma-54 factor, core binding domain DE8555_RS01185 PF00309 Sigma-54 factor, Activator interacting domain (AID) DE8555_RS01185 PF04963 Sigma-54 factor, core binding domain DE8555_RS01185 PF00309 Sigma-54 factor, Activator interacting domain (AID) DE8555_RS01185 PF04552 Sigma-54, DNA binding domain DE8555_RS01200 PF01758 Sodium Bile acid symporter family DE8555_RS01205 PF00109 Beta-ketoacyl synthase, N-terminal domain DE8555_RS01205 PF02801 Beta-ketoacyl synthase, C-terminal domain DE8555_RS01210 PF00550 Phosphopantetheine attachment site DE8555_RS01215 PF01180 Dihydroorotate dehydrogenase DE8555_RS01250 PF08335 GlnD PII-uridylyltransferase DE8555_RS01250 PF03710 Glutamate-ammonia ligase adenylyltransferase DE8555_RS01260 PF01566 Natural resistance-associated macrophage protein DE8555_RS01265 PF03746 LamB/YcsF family DE8555_RS01270 PF02626 Carboxyltransferase domain, subdomain A and B DE8555_RS01275 PF02682 Carboxyltransferase domain, subdomain C and D DE8555_RS01285 PF00580 UvrD/REP helicase N-terminal domain DE8555_RS01285 PF13361 UvrD-like helicase C-terminal domain DE8555_RS01310 PF12762 ISXO2-like transposase domain DE8555_RS01315 PF07690 Major Facilitator Superfamily DE8555_RS01320 PF17284 Spermidine synthase tetramerisation domain DE8555_RS01325 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DE8555_RS01330 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DE8555_RS01335 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DE8555_RS01340 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DE8555_RS01350 PF10531 SLBB domain DE8555_RS01350 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DE8555_RS01350 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DE8555_RS01360 PF00384 Molybdopterin oxidoreductase DE8555_RS01360 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal DE8555_RS01360 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DE8555_RS01365 PF00146 NADH dehydrogenase DE8555_RS01370 PF12838 4Fe-4S dicluster domain DE8555_RS01375 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DE8555_RS01380 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DE8555_RS01385 PF02661 Fic/DOC family DE8555_RS01395 PF00361 Proton-conducting membrane transporter DE8555_RS01395 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DE8555_RS01400 PF00361 Proton-conducting membrane transporter DE8555_RS01400 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus DE8555_RS01405 PF00361 Proton-conducting membrane transporter DE8555_RS01415 PF00348 Polyprenyl synthetase DE8555_RS01420 PF02609 Exonuclease VII small subunit DE8555_RS01425 PF03193 RsgA GTPase DE8555_RS01430 PF00664 ABC transporter transmembrane region DE8555_RS01430 PF00005 ABC transporter DE8555_RS01440 PF07499 RuvA, C-terminal domain DE8555_RS01440 PF01330 RuvA N terminal domain DE8555_RS01450 PF03330 Lytic transglycolase DE8555_RS01450 PF05036 Sporulation related domain DE8555_RS01455 PF00588 SpoU rRNA Methylase family DE8555_RS01460 PF00156 Phosphoribosyl transferase domain DE8555_RS01465 PF00561 alpha/beta hydrolase fold DE8555_RS01470 PF08241 Methyltransferase domain DE8555_RS01475 PF01609 Transposase DDE domain DE8555_RS01490 PF00270 DEAD/DEAH box helicase DE8555_RS01490 PF00271 Helicase conserved C-terminal domain DE8555_RS01490 PF00570 HRDC domain DE8555_RS01490 PF16124 RecQ zinc-binding DE8555_RS01490 PF09382 RQC domain DE8555_RS01495 PF00218 Indole-3-glycerol phosphate synthase DE8555_RS01505 PF03023 Lipid II flippase MurJ DE8555_RS01510 PF01323 DSBA-like thioredoxin domain DE8555_RS01510 PF00085 Thioredoxin DE8555_RS01515 PF01636 Phosphotransferase enzyme family DE8555_RS01520 PF04453 LPS transport system D DE8555_RS01525 PF09312 SurA N-terminal domain DE8555_RS01525 PF00639 PPIC-type PPIASE domain DE8555_RS01530 PF00773 RNB domain DE8555_RS01535 PF03641 Possible lysine decarboxylase DE8555_RS01540 PF08328 Adenylosuccinate lyase C-terminal DE8555_RS01540 PF00206 Lyase DE8555_RS01545 PF01757 Acyltransferase family DE8555_RS01555 PF13307 Helicase C-terminal domain DE8555_RS01555 PF06733 DEAD_2 DE8555_RS01570 PF00145 C-5 cytosine-specific DNA methylase DE8555_RS01595 PF01609 Transposase DDE domain DE8555_RS01610 PF01609 Transposase DDE domain DE8555_RS01620 PF02540 NAD synthase DE8555_RS01620 PF00958 GMP synthase C terminal domain DE8555_RS01620 PF00117 Glutamine amidotransferase class-I DE8555_RS01625 PF00664 ABC transporter transmembrane region DE8555_RS01625 PF00005 ABC transporter DE8555_RS01630 PF00698 Acyl transferase domain DE8555_RS01640 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DE8555_RS01640 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DE8555_RS01660 PF02504 Fatty acid synthesis protein DE8555_RS01670 PF01783 Ribosomal L32p protein family DE8555_RS01680 PF02545 Maf-like protein DE8555_RS01685 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DE8555_RS01690 PF02096 60Kd inner membrane protein DE8555_RS01690 PF14849 YidC periplasmic domain DE8555_RS01700 PF01809 Putative membrane protein insertion efficiency factor DE8555_RS01705 PF00825 Ribonuclease P DE8555_RS01710 PF00468 Ribosomal protein L34 DE8555_RS01715 PF11638 DnaA N-terminal domain DE8555_RS01715 PF08299 Bacterial dnaA protein helix-turn-helix DE8555_RS01715 PF00308 Bacterial dnaA protein DE8555_RS01720 PF00712 DNA polymerase III beta subunit, N-terminal domain DE8555_RS01720 PF02767 DNA polymerase III beta subunit, central domain DE8555_RS01720 PF02768 DNA polymerase III beta subunit, C-terminal domain DE8555_RS01725 PF13090 Polyphosphate kinase C-terminal domain 2 DE8555_RS01725 PF13089 Polyphosphate kinase N-terminal domain DE8555_RS01725 PF02503 Polyphosphate kinase middle domain DE8555_RS01725 PF17941 Polyphosphate kinase C-terminal domain 1 DE8555_RS01740 PF13603 Leucyl-tRNA synthetase, Domain 2 DE8555_RS01740 PF09334 tRNA synthetases class I (M) DE8555_RS01740 PF08264 Anticodon-binding domain of tRNA DE8555_RS01740 PF00133 tRNA synthetases class I (I, L, M and V) DE8555_RS01745 PF02086 D12 class N6 adenine-specific DNA methyltransferase DE8555_RS01750 PF01555 DNA methylase DE8555_RS01785 PF00121 Triosephosphate isomerase DE8555_RS01790 PF13185 GAF domain DE8555_RS01800 PF00581 Rhodanese-like domain DE8555_RS01810 PF07715 TonB-dependent Receptor Plug Domain DE8555_RS01810 PF00593 TonB dependent receptor DE8555_RS01830 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain DE8555_RS01830 PF00326 Prolyl oligopeptidase family DE8555_RS01835 PF00583 Acetyltransferase (GNAT) family DE8555_RS01835 PF00696 Amino acid kinase family DE8555_RS01845 PF00156 Phosphoribosyl transferase domain DE8555_RS01860 PF00814 Glycoprotease family DE8555_RS01870 PF01116 Fructose-bisphosphate aldolase class-II DE8555_RS01875 PF02899 Phage integrase, N-terminal SAM-like domain DE8555_RS01875 PF00589 Phage integrase family DE8555_RS01880 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DE8555_RS01880 PF02779 Transketolase, pyrimidine binding domain DE8555_RS01880 PF02780 Transketolase, C-terminal domain DE8555_RS01885 PF00919 Uncharacterized protein family UPF0004 DE8555_RS01885 PF01938 TRAM domain DE8555_RS01885 PF04055 Radical SAM superfamily DE8555_RS01890 PF01609 Transposase DDE domain DE8555_RS01895 PF00202 Aminotransferase class-III DE8555_RS01900 PF00929 Exonuclease DE8555_RS01910 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DE8555_RS01910 PF00289 Biotin carboxylase, N-terminal domain DE8555_RS01910 PF02785 Biotin carboxylase C-terminal domain DE8555_RS01915 PF00364 Biotin-requiring enzyme DE8555_RS01925 PF02547 Queuosine biosynthesis protein DE8555_RS01935 PF02525 Flavodoxin-like fold DE8555_RS01940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DE8555_RS01940 PF03466 LysR substrate binding domain DE8555_RS01945 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DE8555_RS01945 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DE8555_RS01945 PF02142 MGS-like domain DE8555_RS01965 PF04480 Protein of unknown function (DUF559) DE8555_RS01985 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DE8555_RS01985 PF00117 Glutamine amidotransferase class-I DE8555_RS01990 PF05567 Neisseria PilC beta-propeller domain DE8555_RS01995 PF10609 NUBPL iron-transfer P-loop NTPase DE8555_RS02005 PF00578 AhpC/TSA family DE8555_RS02015 PF01047 MarR family DE8555_RS02020 PF01613 Flavin reductase like domain DE8555_RS02025 PF00483 Nucleotidyl transferase DE8555_RS02030 PF00892 EamA-like transporter family DE8555_RS02035 PF01268 Formate--tetrahydrofolate ligase DE8555_RS02040 PF06071 Protein of unknown function (DUF933) DE8555_RS02040 PF01926 50S ribosome-binding GTPase DE8555_RS02055 PF00579 tRNA synthetases class I (W and Y) DE8555_RS02065 PF01687 Riboflavin kinase DE8555_RS02065 PF06574 FAD synthetase DE8555_RS02070 PF08264 Anticodon-binding domain of tRNA DE8555_RS02070 PF06827 Zinc finger found in FPG and IleRS DE8555_RS02070 PF00133 tRNA synthetases class I (I, L, M and V) DE8555_RS02075 PF01252 Signal peptidase (SPase) II DE8555_RS02080 PF02401 LytB protein DE8555_RS02085 PF13419 Haloacid dehalogenase-like hydrolase DE8555_RS02090 PF00593 TonB dependent receptor DE8555_RS02090 PF07660 Secretin and TonB N terminus short domain DE8555_RS02090 PF07715 TonB-dependent Receptor Plug Domain DE8555_RS02100 PF01336 OB-fold nucleic acid binding domain DE8555_RS02100 PF02811 PHP domain DE8555_RS02100 PF14579 Helix-hairpin-helix motif DE8555_RS02100 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DE8555_RS02100 PF07733 Bacterial DNA polymerase III alpha NTPase domain DE8555_RS02115 PF02811 PHP domain DE8555_RS02120 PF00155 Aminotransferase class I and II DE8555_RS02125 PF02719 Polysaccharide biosynthesis protein DE8555_RS02130 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DE8555_RS02150 PF02397 Bacterial sugar transferase DE8555_RS02170 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DE8555_RS02170 PF01872 RibD C-terminal domain DE8555_RS02175 PF03477 ATP cone domain DE8555_RS02180 PF13230 Glutamine amidotransferases class-II DE8555_RS02185 PF01761 3-dehydroquinate synthase DE8555_RS02190 PF01202 Shikimate kinase DE8555_RS02195 PF07660 Secretin and TonB N terminus short domain DE8555_RS02195 PF03958 Bacterial type II/III secretion system short domain DE8555_RS02195 PF00263 Bacterial type II and III secretion system protein DE8555_RS02195 PF11741 AMIN domain DE8555_RS02205 PF04350 Pilus assembly protein, PilO DE8555_RS02220 PF00905 Penicillin binding protein transpeptidase domain DE8555_RS02220 PF00912 Transglycosylase DE8555_RS02220 PF17092 Penicillin-binding protein OB-like domain DE8555_RS02225 PF01926 50S ribosome-binding GTPase DE8555_RS02230 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DE8555_RS02240 PF05140 ResB-like family DE8555_RS02245 PF01578 Cytochrome C assembly protein DE8555_RS02250 PF00814 Glycoprotease family DE8555_RS02265 PF02773 S-adenosylmethionine synthetase, C-terminal domain DE8555_RS02265 PF00438 S-adenosylmethionine synthetase, N-terminal domain DE8555_RS02265 PF02772 S-adenosylmethionine synthetase, central domain DE8555_RS02275 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family DE8555_RS02280 PF03358 NADPH-dependent FMN reductase DE8555_RS02290 PF03600 Citrate transporter DE8555_RS02295 PF00072 Response regulator receiver domain DE8555_RS02295 PF00486 Transcriptional regulatory protein, C terminal DE8555_RS02300 PF00512 His Kinase A (phospho-acceptor) domain DE8555_RS02300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DE8555_RS02305 PF10150 Ribonuclease E/G family DE8555_RS02305 PF00575 S1 RNA binding domain DE8555_RS02310 PF00462 Glutaredoxin DE8555_RS02315 PF02556 Preprotein translocase subunit SecB DE8555_RS02320 PF00271 Helicase conserved C-terminal domain DE8555_RS02320 PF17191 RecG wedge domain DE8555_RS02320 PF00270 DEAD/DEAH box helicase DE8555_RS02325 PF02774 Semialdehyde dehydrogenase, dimerisation domain DE8555_RS02325 PF01118 Semialdehyde dehydrogenase, NAD binding domain DE8555_RS02330 PF03631 Virulence factor BrkB DE8555_RS02380 PF08479 POTRA domain, ShlB-type DE8555_RS02380 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB DE8555_RS02380 PF17287 POTRA domain DE8555_RS02385 PF04829 Pre-toxin domain with VENN motif DE8555_RS02385 PF13332 Hemagglutinin repeat DE8555_RS02385 PF05860 haemagglutination activity domain DE8555_RS02475 PF03631 Virulence factor BrkB DE8555_RS02485 PF06508 Queuosine biosynthesis protein QueC DE8555_RS02495 PF01242 6-pyruvoyl tetrahydropterin synthase DE8555_RS02500 PF06993 Protein of unknown function (DUF1304) DE8555_RS02505 PF04055 Radical SAM superfamily DE8555_RS02515 PF00933 Glycosyl hydrolase family 3 N terminal domain DE8555_RS02520 PF03553 Na+/H+ antiporter family DE8555_RS02525 PF13180 PDZ domain DE8555_RS02530 PF10576 Iron-sulfur binding domain of endonuclease III DE8555_RS02530 PF00633 Helix-hairpin-helix motif DE8555_RS02530 PF00730 HhH-GPD superfamily base excision DNA repair protein DE8555_RS02545 PF07690 Major Facilitator Superfamily DE8555_RS02555 PF03553 Na+/H+ antiporter family DE8555_RS02560 PF03471 Transporter associated domain DE8555_RS02560 PF00571 CBS domain DE8555_RS02565 PF02130 Uncharacterized protein family UPF0054 DE8555_RS02570 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DE8555_RS02570 PF03900 Porphobilinogen deaminase, C-terminal domain DE8555_RS02575 PF00155 Aminotransferase class I and II DE8555_RS02590 PF02652 L-lactate permease DE8555_RS02595 PF12850 Calcineurin-like phosphoesterase superfamily domain DE8555_RS02605 PF06470 SMC proteins Flexible Hinge Domain DE8555_RS02605 PF02463 RecF/RecN/SMC N terminal domain DE8555_RS02610 PF00107 Zinc-binding dehydrogenase DE8555_RS02610 PF08240 Alcohol dehydrogenase GroES-like domain DE8555_RS02615 PF07963 Prokaryotic N-terminal methylation motif DE8555_RS02615 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor DE8555_RS02620 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DE8555_RS02625 PF00005 ABC transporter DE8555_RS02625 PF12704 MacB-like periplasmic core domain DE8555_RS02625 PF02687 FtsX-like permease family DE8555_RS02630 PF13098 Thioredoxin-like domain DE8555_RS02630 PF10411 Disulfide bond isomerase protein N-terminus DE8555_RS02635 PF17764 3′ DNA-binding domain (3′BD) DE8555_RS02635 PF00271 Helicase conserved C-terminal domain DE8555_RS02635 PF00270 DEAD/DEAH box helicase DE8555_RS02635 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DE8555_RS02635 PF18074 Primosomal protein N C-terminal domain DE8555_RS02645 PF01548 Transposase DE8555_RS02645 PF02371 Transposase IS116/IS110/IS902 family DE8555_RS02650 PF00012 Hsp70 protein DE8555_RS02665 PF01521 Iron-sulphur cluster biosynthesis DE8555_RS02675 PF03109 ABC1 family DE8555_RS02680 PF00132 Bacterial transferase hexapeptide (six repeats) DE8555_RS02680 PF06426 Serine acetyltransferase, N-terminal DE8555_RS02685 PF01025 GrpE DE8555_RS02690 PF04400 (Na+)-NQR maturation NqrM DE8555_RS02695 PF02424 ApbE family DE8555_RS02700 PF00175 Oxidoreductase NAD-binding domain DE8555_RS02700 PF00970 Oxidoreductase FAD-binding domain DE8555_RS02700 PF00111 2Fe-2S iron-sulfur cluster binding domain DE8555_RS02705 PF02508 Rnf-Nqr subunit, membrane protein DE8555_RS02710 PF02508 Rnf-Nqr subunit, membrane protein DE8555_RS02715 PF04205 FMN-binding domain DE8555_RS02720 PF03116 NQR2, RnfD, RnfE family DE8555_RS02725 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) DE8555_RS02725 PF11973 NQRA C-terminal domain DE8555_RS02735 PF04304 Protein of unknown function (DUF454) DE8555_RS02745 PF01037 Lrp/AsnC ligand binding domain DE8555_RS02750 PF08669 Glycine cleavage T-protein C-terminal barrel domain DE8555_RS02750 PF01571 Aminomethyltransferase folate-binding domain DE8555_RS02755 PF01597 Glycine cleavage H-protein DE8555_RS02760 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain DE8555_RS02760 PF01488 Shikimate / quinate 5-dehydrogenase DE8555_RS02760 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain DE8555_RS02765 PF12801 4Fe-4S binding domain DE8555_RS02765 PF04205 FMN-binding domain DE8555_RS02775 PF00005 ABC transporter DE8555_RS02780 PF05573 NosL DE8555_RS02795 PF12762 ISXO2-like transposase domain DE8555_RS02810 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) DE8555_RS02810 PF06594 Haemolysin-type calcium binding protein related domain DE8555_RS02820 PF01297 Zinc-uptake complex component A periplasmic DE8555_RS02825 PF00950 ABC 3 transport family DE8555_RS02830 PF00005 ABC transporter DE8555_RS02835 PF01245 Ribosomal protein L19 DE8555_RS02840 PF01746 tRNA (Guanine-1)-methyltransferase DE8555_RS02845 PF01782 RimM N-terminal domain DE8555_RS02845 PF05239 PRC-barrel domain DE8555_RS02850 PF00886 Ribosomal protein S16 DE8555_RS02860 PF00512 His Kinase A (phospho-acceptor) domain DE8555_RS02860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DE8555_RS02860 PF00672 HAMP domain DE8555_RS02860 PF16527 Two-component sensor protein CpxA, periplasmic domain DE8555_RS02865 PF00486 Transcriptional regulatory protein, C terminal DE8555_RS02865 PF00072 Response regulator receiver domain DE8555_RS02880 PF02545 Maf-like protein DE8555_RS02885 PF00902 Sec-independent protein translocase protein (TatC) DE8555_RS02890 PF02416 mttA/Hcf106 family DE8555_RS02895 PF02416 mttA/Hcf106 family DE8555_RS02905 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase DE8555_RS02910 PF00107 Zinc-binding dehydrogenase DE8555_RS02910 PF08240 Alcohol dehydrogenase GroES-like domain DE8555_RS02915 PF00850 Histone deacetylase domain DE8555_RS02920 PF02699 Preprotein translocase subunit DE8555_RS02925 PF13721 SecD export protein N-terminal TM region DE8555_RS02925 PF07549 SecD/SecF GG Motif DE8555_RS02925 PF02355 Protein export membrane protein DE8555_RS02930 PF02355 Protein export membrane protein DE8555_RS02930 PF07549 SecD/SecF GG Motif DE8555_RS02935 PF00312 Ribosomal protein S15 DE8555_RS02940 PF00005 ABC transporter DE8555_RS02940 PF08402 TOBE domain DE8555_RS02945 PF00528 Binding-protein-dependent transport system inner membrane component DE8555_RS02950 PF00528 Binding-protein-dependent transport system inner membrane component DE8555_RS02955 PF01266 FAD dependent oxidoreductase DE8555_RS02960 PF00909 Ammonium Transporter Family DE8555_RS02965 PF01609 Transposase DDE domain DE8555_RS02970 PF07497 Rho termination factor, RNA-binding domain DE8555_RS02970 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DE8555_RS02970 PF07498 Rho termination factor, N-terminal domain DE8555_RS02975 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DE8555_RS02975 PF02896 PEP-utilising enzyme, TIM barrel domain DE8555_RS02975 PF00391 PEP-utilising enzyme, mobile domain DE8555_RS02980 PF03618 Kinase/pyrophosphorylase DE8555_RS02985 PF13419 Haloacid dehalogenase-like hydrolase DE8555_RS02990 PF04305 Protein of unknown function (DUF455) DE8555_RS03000 PF03548 Outer membrane lipoprotein carrier protein LolA DE8555_RS03005 PF13416 Bacterial extracellular solute-binding protein DE8555_RS03010 PF00535 Glycosyl transferase family 2 DE8555_RS03015 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 DE8555_RS03015 PF00535 Glycosyl transferase family 2 DE8555_RS03020 PF00132 Bacterial transferase hexapeptide (six repeats) DE8555_RS03030 PF16658 Class II release factor RF3, C-terminal domain DE8555_RS03030 PF00009 Elongation factor Tu GTP binding domain DE8555_RS03030 PF03144 Elongation factor Tu domain 2 DE8555_RS03035 PF01502 Phosphoribosyl-AMP cyclohydrolase DE8555_RS03040 PF00977 Histidine biosynthesis protein DE8555_RS03045 PF00977 Histidine biosynthesis protein DE8555_RS03050 PF00117 Glutamine amidotransferase class-I DE8555_RS03055 PF01515 Phosphate acetyl/butaryl transferase DE8555_RS03055 PF07085 DRTGG domain DE8555_RS03060 PF00005 ABC transporter DE8555_RS03060 PF17845 FbpC C-terminal regulatory nucleotide binding domain DE8555_RS03065 PF00528 Binding-protein-dependent transport system inner membrane component DE8555_RS03070 PF01547 Bacterial extracellular solute-binding protein DE8555_RS03080 PF00206 Lyase DE8555_RS03080 PF14698 Argininosuccinate lyase C-terminal DE8555_RS03085 PF00483 Nucleotidyl transferase DE8555_RS03090 PF01725 Ham1 family DE8555_RS03100 PF00719 Inorganic pyrophosphatase DE8555_RS03105 PF00293 NUDIX domain DE8555_RS03125 PF01337 Barstar (barnase inhibitor) DE8555_RS03225 PF02386 Cation transport protein DE8555_RS03230 PF00149 Calcineurin-like phosphoesterase DE8555_RS03235 PF01042 Endoribonuclease L-PSP DE8555_RS03240 PF02462 Opacity family porin protein DE8555_RS03250 PF04055 Radical SAM superfamily DE8555_RS03250 PF06969 HemN C-terminal domain DE8555_RS03255 PF03120 NAD-dependent DNA ligase OB-fold domain DE8555_RS03255 PF00533 BRCA1 C Terminus (BRCT) domain DE8555_RS03255 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DE8555_RS03255 PF12826 Helix-hairpin-helix motif DE8555_RS03255 PF01653 NAD-dependent DNA ligase adenylation domain DE8555_RS03265 PF01510 N-acetylmuramoyl-L-alanine amidase DE8555_RS03270 PF02618 YceG-like family DE8555_RS03275 PF02223 Thymidylate kinase DE8555_RS03280 PF00390 Malic enzyme, N-terminal domain DE8555_RS03280 PF01515 Phosphate acetyl/butaryl transferase DE8555_RS03280 PF03949 Malic enzyme, NAD binding domain DE8555_RS03285 PF02606 Tetraacyldisaccharide-1-P 4'-kinase DE8555_RS03295 PF03966 Trm112p-like protein DE8555_RS03300 PF02348 Cytidylyltransferase DE8555_RS03325 PF00290 Tryptophan synthase alpha chain DE8555_RS03330 PF17848 Acetyl-coA carboxylase zinc finger domain DE8555_RS03330 PF01039 Carboxyl transferase domain DE8555_RS03340 PF01206 Sulfurtransferase TusA DE8555_RS03350 PF01979 Amidohydrolase family DE8555_RS03360 PF01029 NusB family DE8555_RS03365 PF00885 6,7-dimethyl-8-ribityllumazine synthase DE8555_RS03375 PF00035 Double-stranded RNA binding motif DE8555_RS03375 PF14622 Ribonuclease-III-like DE8555_RS03380 PF01926 50S ribosome-binding GTPase DE8555_RS03380 PF07650 KH domain DE8555_RS03385 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase DE8555_RS03390 PF03449 Transcription elongation factor, N-terminal DE8555_RS03390 PF01272 Transcription elongation factor, GreA/GreB, C-term DE8555_RS03395 PF00156 Phosphoribosyl transferase domain DE8555_RS03410 PF08245 Mur ligase middle domain DE8555_RS03410 PF02875 Mur ligase family, glutamate ligase domain DE8555_RS03425 PF00005 ABC transporter DE8555_RS03430 PF00398 Ribosomal RNA adenine dimethylase DE8555_RS03440 PF00291 Pyridoxal-phosphate dependent enzyme DE8555_RS03445 PF03797 Autotransporter beta-domain DE8555_RS03445 PF02395 Immunoglobulin A1 protease DE8555_RS03445 PF03212 Pertactin DE8555_RS03455 PF00753 Metallo-beta-lactamase superfamily DE8555_RS03455 PF03772 Competence protein DE8555_RS03460 PF13525 Outer membrane lipoprotein DE8555_RS03465 PF01479 S4 domain DE8555_RS03465 PF00849 RNA pseudouridylate synthase DE8555_RS03470 PF01758 Sodium Bile acid symporter family DE8555_RS03475 PF02578 Multi-copper polyphenol oxidoreductase laccase DE8555_RS03480 PF04390 Lipopolysaccharide-assembly DE8555_RS03485 PF14840 Processivity clamp loader gamma complex DNA pol III C-term DE8555_RS03485 PF06144 DNA polymerase III, delta subunit DE8555_RS03500 PF08340 Domain of unknown function (DUF1732) DE8555_RS03500 PF03755 YicC-like family, N-terminal region DE8555_RS03505 PF04542 Sigma-70 region 2 DE8555_RS03505 PF00140 Sigma-70 factor, region 1.2 DE8555_RS03505 PF04545 Sigma-70, region 4 DE8555_RS03510 PF00795 Carbon-nitrogen hydrolase DE8555_RS03515 PF05661 Protein of unknown function (DUF808) DE8555_RS03540 PF00762 Ferrochelatase DE8555_RS03545 PF01702 Queuine tRNA-ribosyltransferase DE8555_RS03555 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DE8555_RS03555 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DE8555_RS03555 PF02824 TGS domain DE8555_RS03555 PF03129 Anticodon binding domain DE8555_RS03560 PF05198 Translation initiation factor IF-3, N-terminal domain DE8555_RS03560 PF00707 Translation initiation factor IF-3, C-terminal domain DE8555_RS03565 PF01632 Ribosomal protein L35 DE8555_RS03570 PF00453 Ribosomal protein L20 DE8555_RS03580 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DE8555_RS03580 PF01409 tRNA synthetases class II core domain (F) DE8555_RS03585 PF04480 Protein of unknown function (DUF559) DE8555_RS03585 PF03852 DNA mismatch endonuclease Vsr DE8555_RS03590 PF00145 C-5 cytosine-specific DNA methylase DE8555_RS03600 PF01588 Putative tRNA binding domain DE8555_RS03600 PF03147 Ferredoxin-fold anticodon binding domain DE8555_RS03600 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DE8555_RS03600 PF03483 B3/4 domain DE8555_RS03600 PF03484 tRNA synthetase B5 domain DE8555_RS03605 PF00216 Bacterial DNA-binding protein DE8555_RS03625 PF04055 Radical SAM superfamily DE8555_RS03625 PF06968 Biotin and Thiamin Synthesis associated domain DE8555_RS03625 PF00202 Aminotransferase class-III DE8555_RS03635 PF04345 Chorismate lyase DE8555_RS03640 PF01040 UbiA prenyltransferase family DE8555_RS03645 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DE8555_RS03650 PF02603 HPr Serine kinase N terminus DE8555_RS03650 PF07475 HPr Serine kinase C-terminal domain DE8555_RS03655 PF03668 P-loop ATPase protein family DE8555_RS03660 PF01926 50S ribosome-binding GTPase DE8555_RS03665 PF04079 Segregation and condensation complex subunit ScpB DE8555_RS03670 PF02463 RecF/RecN/SMC N terminal domain DE8555_RS03685 PF01266 FAD dependent oxidoreductase DE8555_RS03685 PF05430 S-adenosyl-L-methionine-dependent methyltransferase DE8555_RS03695 PF01209 ubiE/COQ5 methyltransferase family DE8555_RS03705 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DE8555_RS03715 PF06962 Putative rRNA methylase DE8555_RS03720 PF17209 Hfq protein DE8555_RS03725 PF00768 D-alanyl-D-alanine carboxypeptidase DE8555_RS03730 PF00578 AhpC/TSA family DE8555_RS03735 PF02899 Phage integrase, N-terminal SAM-like domain DE8555_RS03735 PF00589 Phage integrase family DE8555_RS03755 PF04321 RmlD substrate binding domain DE8555_RS03760 PF01259 SAICAR synthetase DE8555_RS03765 PF00575 S1 RNA binding domain DE8555_RS03765 PF03725 3' exoribonuclease family, domain 2 DE8555_RS03765 PF00013 KH domain DE8555_RS03765 PF01138 3' exoribonuclease family, domain 1 DE8555_RS03765 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DE8555_RS03780 PF01678 Diaminopimelate epimerase DE8555_RS03790 PF00291 Pyridoxal-phosphate dependent enzyme DE8555_RS03805 PF10502 Signal peptidase, peptidase S26 DE8555_RS03810 PF00679 Elongation factor G C-terminus DE8555_RS03810 PF06421 GTP-binding protein LepA C-terminus DE8555_RS03810 PF03144 Elongation factor Tu domain 2 DE8555_RS03810 PF00009 Elongation factor Tu GTP binding domain DE8555_RS03815 PF01048 Phosphorylase superfamily DE8555_RS03820 PF00437 Type II/IV secretion system protein DE8555_RS03825 PF09115 DNA polymerase III, delta subunit, C terminal DE8555_RS03835 PF01026 TatD related DNase DE8555_RS03845 PF00462 Glutaredoxin DE8555_RS03885 PF01208 Uroporphyrinogen decarboxylase (URO-D) DE8555_RS03890 PF18073 Rubredoxin metal binding domain DE8555_RS03905 PF00580 UvrD/REP helicase N-terminal domain DE8555_RS03905 PF13361 UvrD-like helicase C-terminal domain DE8555_RS03905 PF12705 PD-(D/E)XK nuclease superfamily DE8555_RS03910 PF04261 Dyp-type peroxidase family DE8555_RS03915 PF00497 Bacterial extracellular solute-binding proteins, family 3 DE8555_RS03920 PF00528 Binding-protein-dependent transport system inner membrane component DE8555_RS03925 PF00005 ABC transporter DE8555_RS03930 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DE8555_RS03930 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DE8555_RS03930 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DE8555_RS03930 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DE8555_RS03935 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DE8555_RS03940 PF00939 Sodium:sulfate symporter transmembrane region DE8555_RS03955 PF01195 Peptidyl-tRNA hydrolase DE8555_RS03960 PF03658 RnfH family Ubiquitin DE8555_RS03965 PF03364 Polyketide cyclase / dehydrase and lipid transport DE8555_RS03970 PF00004 ATPase family associated with various cellular activities (AAA) DE8555_RS03970 PF01434 Peptidase family M41 DE8555_RS03970 PF17862 AAA+ lid domain DE8555_RS03970 PF06480 FtsH Extracellular DE8555_RS03975 PF01728 FtsJ-like methyltransferase DE8555_RS03980 PF01985 CRS1 / YhbY (CRM) domain DE8555_RS03985 PF00490 Delta-aminolevulinic acid dehydratase DE8555_RS03990 PF01053 Cys/Met metabolism PLP-dependent enzyme DE8555_RS03995 PF02649 Type I GTP cyclohydrolase folE2 DE8555_RS04000 PF00881 Nitroreductase family DE8555_RS04005 PF00849 RNA pseudouridylate synthase DE8555_RS04005 PF01479 S4 domain DE8555_RS04010 PF01513 ATP-NAD kinase DE8555_RS04020 PF01370 NAD dependent epimerase/dehydratase family DE8555_RS04025 PF00440 Bacterial regulatory proteins, tetR family DE8555_RS04025 PF08359 YsiA-like protein, C-terminal region DE8555_RS04030 PF01565 FAD binding domain DE8555_RS04030 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DE8555_RS04035 PF01554 MatE DE8555_RS04045 PF13393 Histidyl-tRNA synthetase DE8555_RS04050 PF00709 Adenylosuccinate synthetase DE8555_RS04055 PF01435 Peptidase family M48 DE8555_RS04060 PF05191 Adenylate kinase, active site lid DE8555_RS04065 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DE8555_RS04070 PF00294 pfkB family carbohydrate kinase DE8555_RS04070 PF01467 Cytidylyltransferase-like DE8555_RS04075 PF01381 Helix-turn-helix DE8555_RS04075 PF00145 C-5 cytosine-specific DNA methylase DE8555_RS04085 PF01370 NAD dependent epimerase/dehydratase family DE8555_RS04090 PF02861 Clp amino terminal domain, pathogenicity island component DE8555_RS04090 PF17871 AAA lid domain DE8555_RS04090 PF07724 AAA domain (Cdc48 subfamily) DE8555_RS04090 PF00004 ATPase family associated with various cellular activities (AAA) DE8555_RS04090 PF10431 C-terminal, D2-small domain, of ClpB protein DE8555_RS04095 PF02617 ATP-dependent Clp protease adaptor protein ClpS DE8555_RS04100 PF00313 'Cold-shock' DNA-binding domain DE8555_RS04105 PF01523 Putative modulator of DNA gyrase DE8555_RS04110 PF04751 Protein of unknown function (DUF615) DE8555_RS04120 PF17768 RecJ OB domain DE8555_RS04120 PF01368 DHH family DE8555_RS04120 PF02272 DHHA1 domain DE8555_RS04125 PF12627 Probable RNA and SrmB- binding site of polymerase A DE8555_RS04125 PF01743 Poly A polymerase head domain DE8555_RS04125 PF12626 Polymerase A arginine-rich C-terminus DE8555_RS04135 PF02562 PhoH-like protein DE8555_RS04140 PF13439 Glycosyltransferase Family 4 DE8555_RS04140 PF00534 Glycosyl transferases group 1 DE8555_RS04155 PF00692 dUTPase DE8555_RS04165 PF04381 Putative exonuclease, RdgC DE8555_RS04170 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DE8555_RS04170 PF01926 50S ribosome-binding GTPase DE8555_RS04175 PF09976 Tetratricopeptide repeat-like domain DE8555_RS04180 PF13393 Histidyl-tRNA synthetase DE8555_RS04180 PF03129 Anticodon binding domain DE8555_RS04240 PF01479 S4 domain DE8555_RS04240 PF00849 RNA pseudouridylate synthase DE8555_RS04265 PF02548 Ketopantoate hydroxymethyltransferase DE8555_RS04270 PF02569 Pantoate-beta-alanine ligase DE8555_RS04280 PF03550 Outer membrane lipoprotein LolB DE8555_RS04285 PF08544 GHMP kinases C terminal DE8555_RS04285 PF00288 GHMP kinases N terminal domain DE8555_RS04305 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DE8555_RS04305 PF14572 Phosphoribosyl synthetase-associated domain DE8555_RS04310 PF01386 Ribosomal L25p family DE8555_RS04310 PF14693 Ribosomal protein TL5, C-terminal domain DE8555_RS04315 PF07943 Penicillin-binding protein 5, C-terminal domain DE8555_RS04315 PF00768 D-alanyl-D-alanine carboxypeptidase DE8555_RS04320 PF00585 C-terminal regulatory domain of Threonine dehydratase DE8555_RS04320 PF00291 Pyridoxal-phosphate dependent enzyme DE8555_RS04325 PF00005 ABC transporter DE8555_RS04330 PF00528 Binding-protein-dependent transport system inner membrane component DE8555_RS04335 PF00528 Binding-protein-dependent transport system inner membrane component DE8555_RS04345 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family DE8555_RS04350 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DE8555_RS04350 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DE8555_RS04355 PF00772 DnaB-like helicase N terminal domain DE8555_RS04355 PF03796 DnaB-like helicase C terminal domain DE8555_RS04360 PF12019 Type II transport protein GspH DE8555_RS04360 PF07963 Prokaryotic N-terminal methylation motif DE8555_RS04380 PF07963 Prokaryotic N-terminal methylation motif DE8555_RS04380 PF00114 Pilin (bacterial filament) DE8555_RS04390 PF01609 Transposase DDE domain DE8555_RS04395 PF00692 dUTPase DE8555_RS04400 PF00155 Aminotransferase class I and II DE8555_RS04405 PF03883 Peroxide stress protein YaaA DE8555_RS04420 PF13356 Arm DNA-binding domain DE8555_RS04420 PF00589 Phage integrase family DE8555_RS04570 PF06791 Prophage tail length tape measure protein DE8555_RS04660 PF01609 Transposase DDE domain DE8555_RS04670 PF00529 HlyD membrane-fusion protein of T1SS DE8555_RS04670 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DE8555_RS04675 PF03412 Peptidase C39 family DE8555_RS04675 PF00005 ABC transporter DE8555_RS04675 PF00664 ABC transporter transmembrane region DE8555_RS04695 PF13614 AAA domain DE8555_RS04700 PF01609 Transposase DDE domain DE8555_RS04705 PF03971 Monomeric isocitrate dehydrogenase DE8555_RS04710 PF07922 Glycosyltransferase family 52 DE8555_RS04715 PF01322 Cytochrome C' DE8555_RS04720 PF00106 short chain dehydrogenase DE8555_RS04725 PF03061 Thioesterase superfamily DE8555_RS04730 PF02462 Opacity family porin protein DE8555_RS04745 PF00561 alpha/beta hydrolase fold DE8555_RS04750 PF06804 NlpB/DapX lipoprotein DE8555_RS04755 PF00701 Dihydrodipicolinate synthetase family DE8555_RS04765 PF00860 Permease family DE8555_RS04770 PF08032 RNA 2'-O ribose methyltransferase substrate binding DE8555_RS04770 PF00588 SpoU rRNA Methylase family DE8555_RS04780 PF14437 MafB19-like deaminase DE8555_RS04805 PF01132 Elongation factor P (EF-P) OB domain DE8555_RS04805 PF08207 Elongation factor P (EF-P) KOW-like domain DE8555_RS04805 PF09285 Elongation factor P, C-terminal DE8555_RS04815 PF00561 alpha/beta hydrolase fold DE8555_RS04815 PF07021 Methionine biosynthesis protein MetW DE8555_RS04820 PF00561 alpha/beta hydrolase fold DE8555_RS04830 PF00444 Ribosomal protein L36 DE8555_RS04835 PF01197 Ribosomal protein L31 DE8555_RS04840 PF02219 Methylenetetrahydrofolate reductase DE8555_RS04845 PF01717 Cobalamin-independent synthase, Catalytic domain DE8555_RS04845 PF08267 Cobalamin-independent synthase, N-terminal domain DE8555_RS04855 PF08534 Redoxin DE8555_RS04855 PF00462 Glutaredoxin DE8555_RS04860 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DE8555_RS04860 PF07992 Pyridine nucleotide-disulphide oxidoreductase DE8555_RS04880 PF00890 FAD binding domain DE8555_RS04880 PF02910 Fumarate reductase flavoprotein C-term DE8555_RS04885 PF13085 2Fe-2S iron-sulfur cluster binding domain DE8555_RS04890 PF03937 Flavinator of succinate dehydrogenase DE8555_RS04895 PF00285 Citrate synthase, C-terminal domain DE8555_RS04900 PF02779 Transketolase, pyrimidine binding domain DE8555_RS04900 PF16870 2-oxoglutarate dehydrogenase C-terminal DE8555_RS04900 PF00676 Dehydrogenase E1 component DE8555_RS04900 PF16078 2-oxoglutarate dehydrogenase N-terminus DE8555_RS04905 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DE8555_RS04905 PF02817 e3 binding domain DE8555_RS04905 PF00364 Biotin-requiring enzyme DE8555_RS04910 PF07992 Pyridine nucleotide-disulphide oxidoreductase DE8555_RS04910 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DE8555_RS04920 PF08442 ATP-grasp domain DE8555_RS04920 PF00549 CoA-ligase DE8555_RS04925 PF02629 CoA binding domain DE8555_RS04925 PF00549 CoA-ligase DE8555_RS04930 PF01797 Transposase IS200 like DE8555_RS04945 PF17755 UvrA DNA-binding domain DE8555_RS04945 PF17760 UvrA interaction domain DE8555_RS04950 PF02666 Phosphatidylserine decarboxylase DE8555_RS04960 PF00593 TonB dependent receptor DE8555_RS04960 PF07715 TonB-dependent Receptor Plug Domain DE8555_RS04965 PF00117 Glutamine amidotransferase class-I DE8555_RS04970 PF00591 Glycosyl transferase family, a/b domain DE8555_RS04970 PF02885 Glycosyl transferase family, helical bundle domain DE8555_RS04980 PF12762 ISXO2-like transposase domain DE8555_RS05020 PF02525 Flavodoxin-like fold DE8555_RS05025 PF02233 NAD(P) transhydrogenase beta subunit DE8555_RS05035 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DE8555_RS05035 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch DE8555_RS05035 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DE8555_RS05050 PF02142 MGS-like domain DE8555_RS05050 PF01808 AICARFT/IMPCHase bienzyme DE8555_RS05055 PF01548 Transposase DE8555_RS05055 PF02371 Transposase IS116/IS110/IS902 family DE8555_RS05100 PF07411 Domain of unknown function (DUF1508) DE8555_RS05120 PF01609 Transposase DDE domain DE8555_RS05125 PF15401 Tryptophan-ring motif of head of Trimeric autotransporter adhesin DE8555_RS05125 PF13018 Extended Signal Peptide of Type V secretion system DE8555_RS05125 PF05662 Coiled stalk of trimeric autotransporter adhesin DE8555_RS05125 PF03895 YadA-like membrane anchor domain DE8555_RS05145 PF00301 Rubredoxin DE8555_RS05170 PF01565 FAD binding domain DE8555_RS05170 PF09330 D-lactate dehydrogenase, membrane binding DE8555_RS05185 PF01207 Dihydrouridine synthase (Dus) DE8555_RS05195 PF01609 Transposase DDE domain DE8555_RS05280 PF00665 Integrase core domain DE8555_RS05280 PF13333 Integrase core domain DE8555_RS05280 PF13276 HTH-like domain DE8555_RS05320 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain DE8555_RS05320 PF02222 ATP-grasp domain DE8555_RS05330 PF00425 chorismate binding enzyme DE8555_RS05330 PF04715 Anthranilate synthase component I, N terminal region DE8555_RS05340 PF12848 ABC transporter DE8555_RS05340 PF16326 ABC transporter C-terminal domain DE8555_RS05340 PF00005 ABC transporter DE8555_RS05345 PF09335 SNARE associated Golgi protein DE8555_RS05350 PF00464 Serine hydroxymethyltransferase DE8555_RS05365 PF00462 Glutaredoxin DE8555_RS05370 PF04325 Protein of unknown function (DUF465) DE8555_RS05375 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain DE8555_RS05380 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ DE8555_RS05385 PF02660 Glycerol-3-phosphate acyltransferase DE8555_RS05395 PF00293 NUDIX domain DE8555_RS05410 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DE8555_RS05420 PF09397 Ftsk gamma domain DE8555_RS05420 PF17854 FtsK alpha domain DE8555_RS05420 PF01580 FtsK/SpoIIIE family DE8555_RS05425 PF00171 Aldehyde dehydrogenase family DE8555_RS05430 PF00696 Amino acid kinase family DE8555_RS05430 PF01472 PUA domain DE8555_RS05440 PF08502 LeuA allosteric (dimerisation) domain DE8555_RS05440 PF00682 HMGL-like DE8555_RS05445 PF02810 SEC-C motif DE8555_RS05445 PF03695 Uncharacterised protein family (UPF0149) DE8555_RS05450 PF01790 Prolipoprotein diacylglyceryl transferase DE8555_RS05455 PF18027 Cytosolic carboxypeptidase N-terminal domain DE8555_RS05455 PF00246 Zinc carboxypeptidase DE8555_RS05460 PF00696 Amino acid kinase family DE8555_RS05480 PF08299 Bacterial dnaA protein helix-turn-helix DE8555_RS05480 PF00308 Bacterial dnaA protein DE8555_RS05485 PF00005 ABC transporter DE8555_RS05485 PF06472 ABC transporter transmembrane region 2 DE8555_RS05545 PF01381 Helix-turn-helix DE8555_RS05550 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB DE8555_RS05570 PF00005 ABC transporter DE8555_RS05570 PF06472 ABC transporter transmembrane region 2 DE8555_RS05585 PF05643 Putative bacterial lipoprotein (DUF799) DE8555_RS05595 PF03783 Curli production assembly/transport component CsgG DE8555_RS05605 PF01593 Flavin containing amine oxidoreductase DE8555_RS05615 PF00012 Hsp70 protein DE8555_RS05625 PF10077 Uncharacterized protein conserved in bacteria (DUF2314) DE8555_RS05630 PF00111 2Fe-2S iron-sulfur cluster binding domain DE8555_RS05645 PF04384 Iron-sulphur cluster assembly DE8555_RS05650 PF01479 S4 domain DE8555_RS05655 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DE8555_RS05660 PF01171 PP-loop family DE8555_RS05660 PF09179 TilS substrate binding domain DE8555_RS05665 PF08032 RNA 2'-O ribose methyltransferase substrate binding DE8555_RS05665 PF00588 SpoU rRNA Methylase family DE8555_RS05685 PF01225 Mur ligase family, catalytic domain DE8555_RS05685 PF02875 Mur ligase family, glutamate ligase domain DE8555_RS05685 PF08245 Mur ligase middle domain DE8555_RS05695 PF04055 Radical SAM superfamily DE8555_RS05695 PF06968 Biotin and Thiamin Synthesis associated domain DE8555_RS05710 PF00920 Dehydratase family DE8555_RS05715 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DE8555_RS05715 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DE8555_RS05720 PF00258 Flavodoxin DE8555_RS05720 PF00175 Oxidoreductase NAD-binding domain DE8555_RS05720 PF00667 FAD binding domain DE8555_RS05725 PF00009 Elongation factor Tu GTP binding domain DE8555_RS05730 PF01507 Phosphoadenosine phosphosulfate reductase family DE8555_RS05735 PF01507 Phosphoadenosine phosphosulfate reductase family DE8555_RS05740 PF10414 Sirohaem synthase dimerisation region DE8555_RS05740 PF14824 Sirohaem biosynthesis protein central DE8555_RS05740 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DE8555_RS05755 PF01256 Carbohydrate kinase DE8555_RS05760 PF00009 Elongation factor Tu GTP binding domain DE8555_RS05760 PF00679 Elongation factor G C-terminus DE8555_RS05760 PF03144 Elongation factor Tu domain 2 DE8555_RS05785 PF17876 Cold shock domain DE8555_RS05785 PF08461 Ribonuclease R winged-helix domain DE8555_RS05785 PF00575 S1 RNA binding domain DE8555_RS05785 PF00773 RNB domain DE8555_RS05785 PF08206 Ribonuclease B OB domain DE8555_RS05795 PF00478 IMP dehydrogenase / GMP reductase domain DE8555_RS05795 PF00571 CBS domain DE8555_RS05800 PF08335 GlnD PII-uridylyltransferase DE8555_RS05800 PF01966 HD domain DE8555_RS05805 PF01381 Helix-turn-helix DE8555_RS05815 PF00210 Ferritin-like domain DE8555_RS05820 PF00210 Ferritin-like domain DE8555_RS05825 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family DE8555_RS05825 PF04055 Radical SAM superfamily DE8555_RS05830 PF03099 Biotin/lipoate A/B protein ligase family DE8555_RS05835 PF04359 Protein of unknown function (DUF493) DE8555_RS05845 PF01594 AI-2E family transporter DE8555_RS05850 PF01145 SPFH domain / Band 7 family DE8555_RS05850 PF16200 C-terminal region of band_7 DE8555_RS05860 PF03167 Uracil DNA glycosylase superfamily DE8555_RS05865 PF12706 Beta-lactamase superfamily domain DE8555_RS05875 PF01548 Transposase DE8555_RS05875 PF02371 Transposase IS116/IS110/IS902 family DE8555_RS05910 PF12848 ABC transporter DE8555_RS05910 PF00005 ABC transporter DE8555_RS05920 PF00742 Homoserine dehydrogenase DE8555_RS05920 PF03447 Homoserine dehydrogenase, NAD binding domain DE8555_RS05920 PF01842 ACT domain DE8555_RS05930 PF00216 Bacterial DNA-binding protein DE8555_RS05935 PF00004 ATPase family associated with various cellular activities (AAA) DE8555_RS05935 PF05362 Lon protease (S16) C-terminal proteolytic domain DE8555_RS05935 PF02190 ATP-dependent protease La (LON) substrate-binding domain DE8555_RS05940 PF05175 Methyltransferase small domain DE8555_RS05940 PF17827 PrmC N-terminal domain DE8555_RS05945 PF13538 UvrD-like helicase C-terminal domain DE8555_RS05950 PF00005 ABC transporter DE8555_RS05955 PF02687 FtsX-like permease family DE8555_RS05955 PF12704 MacB-like periplasmic core domain DE8555_RS05965 PF02132 RecR protein DE8555_RS05965 PF13662 Toprim domain DE8555_RS05975 PF03960 ArsC family DE8555_RS05980 PF00005 ABC transporter DE8555_RS05980 PF12848 ABC transporter DE8555_RS05985 PF01966 HD domain DE8555_RS05985 PF12627 Probable RNA and SrmB- binding site of polymerase A DE8555_RS05985 PF01743 Poly A polymerase head domain DE8555_RS05995 PF05496 Holliday junction DNA helicase RuvB P-loop domain DE8555_RS05995 PF17864 RuvB AAA lid domain DE8555_RS05995 PF05491 RuvB C-terminal winged helix domain DE8555_RS06000 PF00834 Ribulose-phosphate 3 epimerase family DE8555_RS06020 PF00677 Lumazine binding domain DE8555_RS06025 PF12804 MobA-like NTP transferase domain DE8555_RS06030 PF07730 Histidine kinase DE8555_RS06030 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term DE8555_RS06030 PF00672 HAMP domain DE8555_RS06030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DE8555_RS06035 PF00072 Response regulator receiver domain DE8555_RS06035 PF00196 Bacterial regulatory proteins, luxR family DE8555_RS06040 PF00586 AIR synthase related protein, N-terminal domain DE8555_RS06040 PF02769 AIR synthase related protein, C-terminal domain DE8555_RS06060 PF00925 GTP cyclohydrolase II DE8555_RS06065 PF00535 Glycosyl transferase family 2 DE8555_RS06070 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DE8555_RS06070 PF00925 GTP cyclohydrolase II DE8555_RS06085 PF12002 MgsA AAA+ ATPase C terminal DE8555_RS06085 PF16193 AAA C-terminal domain DE8555_RS06085 PF00004 ATPase family associated with various cellular activities (AAA) DE8555_RS06100 PF03466 LysR substrate binding domain DE8555_RS06100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DE8555_RS06115 PF14821 Threonine synthase N terminus DE8555_RS06115 PF00291 Pyridoxal-phosphate dependent enzyme DE8555_RS06125 PF00970 Oxidoreductase FAD-binding domain DE8555_RS06125 PF00175 Oxidoreductase NAD-binding domain DE8555_RS06135 PF00403 Heavy-metal-associated domain DE8555_RS06140 PF16360 GTP-binding GTPase Middle Region DE8555_RS06140 PF01926 50S ribosome-binding GTPase DE8555_RS06140 PF13167 GTP-binding GTPase N-terminal DE8555_RS06150 PF02677 Epoxyqueuosine reductase QueH DE8555_RS06155 PF04002 RadC-like JAB domain DE8555_RS06165 PF00330 Aconitase family (aconitate hydratase) DE8555_RS06175 PF00694 Aconitase C-terminal domain DE8555_RS06185 PF09564 NgoBV restriction endonuclease DE8555_RS06190 PF09564 NgoBV restriction endonuclease DE8555_RS06195 PF00180 Isocitrate/isopropylmalate dehydrogenase DE8555_RS06200 PF04264 YceI-like domain DE8555_RS06205 PF00206 Lyase DE8555_RS06205 PF10415 Fumarase C C-terminus DE8555_RS06215 PF01556 DnaJ C terminal domain DE8555_RS06215 PF00226 DnaJ domain DE8555_RS06215 PF00684 DnaJ central domain DE8555_RS06225 PF01042 Endoribonuclease L-PSP DE8555_RS06235 PF01171 PP-loop family DE8555_RS06240 PF04851 Type III restriction enzyme, res subunit DE8555_RS06240 PF08774 VRR-NUC domain DE8555_RS06245 PF01555 DNA methylase DE8555_RS06245 PF18273 Type III R-M EcoP15I C-terminal domain DE8555_RS06250 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DE8555_RS06255 PF07683 Cobalamin synthesis protein cobW C-terminal domain DE8555_RS06255 PF02492 CobW/HypB/UreG, nucleotide-binding domain DE8555_RS06265 PF01451 Low molecular weight phosphotyrosine protein phosphatase DE8555_RS06270 PF02595 Glycerate kinase family DE8555_RS06280 PF13847 Methyltransferase domain DE8555_RS06280 PF10119 Predicted methyltransferase regulatory domain DE8555_RS06285 PF00403 Heavy-metal-associated domain DE8555_RS06295 PF03062 MBOAT, membrane-bound O-acyltransferase family DE8555_RS06315 PF13193 AMP-binding enzyme C-terminal domain DE8555_RS06315 PF00501 AMP-binding enzyme DE8555_RS06320 PF02028 BCCT, betaine/carnitine/choline family transporter DE8555_RS06330 PF13406 Transglycosylase SLT domain DE8555_RS06340 PF00270 DEAD/DEAH box helicase DE8555_RS06340 PF02559 CarD-like/TRCF domain DE8555_RS06340 PF03461 TRCF domain DE8555_RS06340 PF17757 UvrB interaction domain DE8555_RS06340 PF00271 Helicase conserved C-terminal domain DE8555_RS06345 PF02261 Aspartate decarboxylase DE8555_RS06350 PF00793 DAHP synthetase I family DE8555_RS06360 PF00113 Enolase, C-terminal TIM barrel domain DE8555_RS06360 PF03952 Enolase, N-terminal domain DE8555_RS06365 PF04977 Septum formation initiator DE8555_RS06370 PF00111 2Fe-2S iron-sulfur cluster binding domain DE8555_RS06375 PF00268 Ribonucleotide reductase, small chain DE8555_RS06385 PF00317 Ribonucleotide reductase, all-alpha domain DE8555_RS06385 PF02867 Ribonucleotide reductase, barrel domain DE8555_RS06385 PF03477 ATP cone domain DE8555_RS06395 PF01553 Acyltransferase DE8555_RS06400 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DE8555_RS06400 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DE8555_RS06400 PF06827 Zinc finger found in FPG and IleRS DE8555_RS06410 PF01476 LysM domain DE8555_RS06410 PF01464 Transglycosylase SLT domain DE8555_RS06415 PF00849 RNA pseudouridylate synthase DE8555_RS06415 PF01479 S4 domain DE8555_RS06425 PF02224 Cytidylate kinase DE8555_RS06430 PF00575 S1 RNA binding domain DE8555_RS06435 PF00216 Bacterial DNA-binding protein DE8555_RS06440 PF13411 MerR HTH family regulatory protein DE8555_RS06445 PF08240 Alcohol dehydrogenase GroES-like domain DE8555_RS06445 PF00107 Zinc-binding dehydrogenase DE8555_RS06450 PF00756 Putative esterase DE8555_RS06455 PF03969 AFG1-like ATPase DE8555_RS06460 PF00334 Nucleoside diphosphate kinase DE8555_RS06465 PF04055 Radical SAM superfamily DE8555_RS06475 PF04551 GcpE protein DE8555_RS06480 PF00574 Clp protease DE8555_RS06485 PF05697 Bacterial trigger factor protein (TF) DE8555_RS06485 PF05698 Bacterial trigger factor protein (TF) C-terminus DE8555_RS06485 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DE8555_RS06490 PF17854 FtsK alpha domain DE8555_RS06490 PF09397 Ftsk gamma domain DE8555_RS06490 PF13491 4TM region of DNA translocase FtsK/SpoIIIE DE8555_RS06490 PF01580 FtsK/SpoIIIE family DE8555_RS06495 PF00860 Permease family DE8555_RS06515 PF01066 CDP-alcohol phosphatidyltransferase DE8555_RS06520 PF01925 Sulfite exporter TauE/SafE DE8555_RS06525 PF01281 Ribosomal protein L9, N-terminal domain DE8555_RS06525 PF03948 Ribosomal protein L9, C-terminal domain DE8555_RS06530 PF01084 Ribosomal protein S18 DE8555_RS06540 PF01250 Ribosomal protein S6 DE8555_RS06545 PF07992 Pyridine nucleotide-disulphide oxidoreductase DE8555_RS06550 PF00403 Heavy-metal-associated domain DE8555_RS06555 PF08459 UvrC Helix-hairpin-helix N-terminal DE8555_RS06555 PF02151 UvrB/uvrC motif DE8555_RS06555 PF01541 GIY-YIG catalytic domain DE8555_RS06560 PF08238 Sel1 repeat DE8555_RS06565 PF08238 Sel1 repeat DE8555_RS06570 PF02390 Putative methyltransferase DE8555_RS06575 PF17757 UvrB interaction domain DE8555_RS06575 PF12344 Ultra-violet resistance protein B DE8555_RS06575 PF00271 Helicase conserved C-terminal domain DE8555_RS06575 PF04851 Type III restriction enzyme, res subunit DE8555_RS06575 PF02151 UvrB/uvrC motif DE8555_RS06580 PF03572 Peptidase family S41 DE8555_RS06580 PF13180 PDZ domain DE8555_RS06585 PF01551 Peptidase family M23 DE8555_RS06595 PF05981 CreA protein DE8555_RS06600 PF02622 Uncharacterized ACR, COG1678 DE8555_RS06605 PF03652 Holliday junction resolvase DE8555_RS06610 PF01557 Fumarylacetoacetate (FAA) hydrolase family DE8555_RS06615 PF04073 Aminoacyl-tRNA editing domain DE8555_RS06615 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DE8555_RS06615 PF03129 Anticodon binding domain DE8555_RS06625 PF00456 Transketolase, thiamine diphosphate binding domain DE8555_RS06625 PF17831 Pyruvate dehydrogenase E1 component middle domain DE8555_RS06630 PF00364 Biotin-requiring enzyme DE8555_RS06630 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DE8555_RS06630 PF02817 e3 binding domain DE8555_RS06635 PF07992 Pyridine nucleotide-disulphide oxidoreductase DE8555_RS06635 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DE8555_RS06650 PF00459 Inositol monophosphatase family DE8555_RS06655 PF00588 SpoU rRNA Methylase family DE8555_RS06665 PF01189 16S rRNA methyltransferase RsmB/F DE8555_RS06665 PF01029 NusB family DE8555_RS06675 PF00171 Aldehyde dehydrogenase family DE8555_RS06680 PF01914 MarC family integral membrane protein DE8555_RS06685 PF02686 Glu-tRNAGln amidotransferase C subunit DE8555_RS06690 PF01425 Amidase DE8555_RS06695 PF04393 Protein of unknown function (DUF535) DE8555_RS06700 PF02637 GatB domain DE8555_RS06700 PF02934 GatB/GatE catalytic domain DE8555_RS06705 PF00970 Oxidoreductase FAD-binding domain DE8555_RS06705 PF00111 2Fe-2S iron-sulfur cluster binding domain DE8555_RS06705 PF00175 Oxidoreductase NAD-binding domain DE8555_RS06710 PF01243 Pyridoxamine 5'-phosphate oxidase DE8555_RS06710 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region DE8555_RS06715 PF01479 S4 domain DE8555_RS06715 PF00849 RNA pseudouridylate synthase DE8555_RS06725 PF02601 Exonuclease VII, large subunit DE8555_RS06725 PF13742 OB-fold nucleic acid binding domain DE8555_RS06730 PF02540 NAD synthase DE8555_RS06735 PF01814 Hemerythrin HHE cation binding domain DE8555_RS06740 PF00085 Thioredoxin DE8555_RS06745 PF10672 S-adenosylmethionine-dependent methyltransferase DE8555_RS06755 PF00271 Helicase conserved C-terminal domain DE8555_RS06755 PF00270 DEAD/DEAH box helicase DE8555_RS06780 PF00202 Aminotransferase class-III DE8555_RS06785 PF10431 C-terminal, D2-small domain, of ClpB protein DE8555_RS06785 PF07724 AAA domain (Cdc48 subfamily) DE8555_RS06785 PF06689 ClpX C4-type zinc finger DE8555_RS06790 PF02033 Ribosome-binding factor A DE8555_RS06795 PF09157 Pseudouridine synthase II TruB, C-terminal DE8555_RS06795 PF01509 TruB family pseudouridylate synthase (N terminal domain) DE8555_RS06795 PF16198 tRNA pseudouridylate synthase B C-terminal domain DE8555_RS06800 PF12564 Type III restriction/modification enzyme methylation subunit DE8555_RS06805 PF01555 DNA methylase DE8555_RS06810 PF04851 Type III restriction enzyme, res subunit DE8555_RS06815 PF01070 FMN-dependent dehydrogenase DE8555_RS06820 PF02082 Transcriptional regulator DE8555_RS06825 PF00266 Aminotransferase class-V DE8555_RS06835 PF01592 NifU-like N terminal domain DE8555_RS06840 PF01521 Iron-sulphur cluster biosynthesis DE8555_RS06845 PF03889 Alternative ribosome-rescue factor A DE8555_RS06850 PF07743 HSCB C-terminal oligomerisation domain DE8555_RS06850 PF00226 DnaJ domain DE8555_RS06855 PF03989 DNA gyrase C-terminal domain, beta-propeller DE8555_RS06855 PF00521 DNA gyrase/topoisomerase IV, subunit A DE8555_RS06885 PF00342 Phosphoglucose isomerase DE8555_RS06890 PF01418 Helix-turn-helix domain, rpiR family DE8555_RS06890 PF01380 SIS domain DE8555_RS06895 PF02685 Glucokinase DE8555_RS06900 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DE8555_RS06905 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DE8555_RS06905 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DE8555_RS06910 PF00920 Dehydratase family DE8555_RS06915 PF01081 KDPG and KHG aldolase DE8555_RS06925 PF00730 HhH-GPD superfamily base excision DNA repair protein DE8555_RS06925 PF00633 Helix-hairpin-helix motif DE8555_RS06925 PF10576 Iron-sulfur binding domain of endonuclease III DE8555_RS06925 PF14815 NUDIX domain DE8555_RS06930 PF00080 Copper/zinc superoxide dismutase (SODC) DE8555_RS06935 PF01609 Transposase DDE domain DE8555_RS06945 PF00005 ABC transporter DE8555_RS06945 PF03412 Peptidase C39 family DE8555_RS06945 PF00664 ABC transporter transmembrane region DE8555_RS06950 PF12762 ISXO2-like transposase domain DE8555_RS06960 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) DE8555_RS06960 PF06594 Haemolysin-type calcium binding protein related domain DE8555_RS06975 PF17432 Domain of unknown function (DUF3458_C) ARM repeats DE8555_RS06975 PF01433 Peptidase family M1 domain DE8555_RS06975 PF11940 Domain of unknown function (DUF3458) Ig-like fold DE8555_RS06990 PF03279 Bacterial lipid A biosynthesis acyltransferase DE8555_RS06995 PF02075 Crossover junction endodeoxyribonuclease RuvC DE8555_RS07000 PF02954 Bacterial regulatory protein, Fis family DE8555_RS07005 PF01207 Dihydrouridine synthase (Dus) DE8555_RS07015 PF00270 DEAD/DEAH box helicase DE8555_RS07015 PF00271 Helicase conserved C-terminal domain DE8555_RS07025 PF02661 Fic/DOC family DE8555_RS07025 PF13784 Fic/DOC family N-terminal DE8555_RS07040 PF01336 OB-fold nucleic acid binding domain DE8555_RS07040 PF00152 tRNA synthetases class II (D, K and N) DE8555_RS07055 PF00557 Metallopeptidase family M24 DE8555_RS07055 PF01321 Creatinase/Prolidase N-terminal domain DE8555_RS07065 PF00267 Gram-negative porin DE8555_RS07070 PF01272 Transcription elongation factor, GreA/GreB, C-term DE8555_RS07070 PF03449 Transcription elongation factor, N-terminal DE8555_RS07080 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DE8555_RS07085 PF00877 NlpC/P60 family DE8555_RS07090 PF13091 PLD-like domain DE8555_RS07095 PF07690 Major Facilitator Superfamily DE8555_RS07100 PF02754 Cysteine-rich domain DE8555_RS07105 PF02589 LUD domain DE8555_RS07110 PF02589 LUD domain DE8555_RS07110 PF13183 4Fe-4S dicluster domain DE8555_RS07110 PF11870 Domain of unknown function (DUF3390) DE8555_RS07115 PF00731 AIR carboxylase DE8555_RS07135 PF08676 MutL C terminal dimerisation domain DE8555_RS07135 PF01119 DNA mismatch repair protein, C-terminal domain DE8555_RS07140 PF12170 DNA polymerase III tau subunit V interacting with alpha DE8555_RS07140 PF12169 DNA polymerase III subunits gamma and tau domain III DE8555_RS07145 PF02575 YbaB/EbfC DNA-binding family DE8555_RS07160 PF00154 recA bacterial DNA recombination protein DE8555_RS07165 PF01487 Type I 3-dehydroquinase DE8555_RS07170 PF13361 UvrD-like helicase C-terminal domain DE8555_RS07170 PF00580 UvrD/REP helicase N-terminal domain DE8555_RS07175 PF00817 impB/mucB/samB family DE8555_RS07175 PF11799 impB/mucB/samB family C-terminal domain DE8555_RS07175 PF11798 IMS family HHH motif DE8555_RS07185 PF01609 Transposase DDE domain DE8555_RS07190 PF00175 Oxidoreductase NAD-binding domain DE8555_RS07190 PF00970 Oxidoreductase FAD-binding domain DE8555_RS07195 PF00589 Phage integrase family DE8555_RS07195 PF13356 Arm DNA-binding domain DE8555_RS07220 PF03406 Phage tail fibre repeat DE8555_RS07230 PF01381 Helix-turn-helix DE8555_RS07235 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB DE8555_RS07250 PF17482 Phage tail sheath C-terminal domain DE8555_RS07250 PF04984 Phage tail sheath protein subtilisin-like domain DE8555_RS07350 PF05840 Bacteriophage replication gene A protein (GPA) DE8555_RS07440 PF00145 C-5 cytosine-specific DNA methylase DE8555_RS07440 PF12728 Helix-turn-helix domain DE8555_RS07445 PF01258 Prokaryotic dksA/traR C4-type zinc finger DE8555_RS07465 PF00929 Exonuclease DE8555_RS07480 PF03060 Nitronate monooxygenase DE8555_RS07490 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase DE8555_RS07490 PF13746 4Fe-4S dicluster domain DE8555_RS07490 PF12801 4Fe-4S binding domain DE8555_RS07505 PF02779 Transketolase, pyrimidine binding domain DE8555_RS07505 PF02780 Transketolase, C-terminal domain DE8555_RS07505 PF00456 Transketolase, thiamine diphosphate binding domain DE8555_RS07510 PF00206 Lyase DE8555_RS07510 PF10415 Fumarase C C-terminus DE8555_RS07515 PF00892 EamA-like transporter family DE8555_RS07520 PF00436 Single-strand binding protein family DE8555_RS07525 PF07690 Major Facilitator Superfamily DE8555_RS07530 PF01464 Transglycosylase SLT domain DE8555_RS07530 PF10145 Phage-related minor tail protein DE8555_RS07530 PF01551 Peptidase family M23 DE8555_RS07545 PF01609 Transposase DDE domain DE8555_RS07560 PF02462 Opacity family porin protein DE8555_RS07565 PF04575 Protein of unknown function (DUF560) DE8555_RS07570 PF02541 Ppx/GppA phosphatase family DE8555_RS07585 PF00579 tRNA synthetases class I (W and Y) DE8555_RS07590 PF10431 C-terminal, D2-small domain, of ClpB protein DE8555_RS07590 PF02861 Clp amino terminal domain, pathogenicity island component DE8555_RS07590 PF17871 AAA lid domain DE8555_RS07590 PF07724 AAA domain (Cdc48 subfamily) DE8555_RS07590 PF00004 ATPase family associated with various cellular activities (AAA) DE8555_RS07595 PF00155 Aminotransferase class I and II DE8555_RS07600 PF01361 Tautomerase enzyme DE8555_RS07610 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DE8555_RS07610 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DE8555_RS07620 PF13419 Haloacid dehalogenase-like hydrolase DE8555_RS07625 PF02631 RecX family DE8555_RS07640 PF03061 Thioesterase superfamily DE8555_RS07645 PF01476 LysM domain DE8555_RS07645 PF01551 Peptidase family M23 DE8555_RS07650 PF01975 Survival protein SurE DE8555_RS07655 PF03471 Transporter associated domain DE8555_RS07655 PF00571 CBS domain DE8555_RS07655 PF03741 Integral membrane protein TerC family DE8555_RS07670 PF00171 Aldehyde dehydrogenase family DE8555_RS07685 PF02554 Carbon starvation protein CstA DE8555_RS07685 PF13722 5TM C-terminal transporter carbon starvation CstA DE8555_RS07695 PF00593 TonB dependent receptor DE8555_RS07695 PF07715 TonB-dependent Receptor Plug Domain DE8555_RS07710 PF00696 Amino acid kinase family DE8555_RS07710 PF13840 ACT domain DE8555_RS07710 PF01842 ACT domain DE8555_RS07720 PF01138 3' exoribonuclease family, domain 1 DE8555_RS07720 PF03725 3' exoribonuclease family, domain 2 DE8555_RS07725 PF00582 Universal stress protein family DE8555_RS07730 PF00899 ThiF family DE8555_RS07735 PF02616 Segregation and condensation protein ScpA DE8555_RS07740 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family DE8555_RS07740 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain DE8555_RS07745 PF03485 Arginyl tRNA synthetase N terminal domain DE8555_RS07745 PF05746 DALR anticodon binding domain DE8555_RS07745 PF00750 tRNA synthetases class I (R) DE8555_RS07765 PF00528 Binding-protein-dependent transport system inner membrane component DE8555_RS07780 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DE8555_RS07785 PF02542 YgbB family DE8555_RS07790 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DE8555_RS07795 PF00929 Exonuclease DE8555_RS07800 PF07690 Major Facilitator Superfamily DE8555_RS07815 PF00871 Acetokinase family DE8555_RS07820 PF00085 Thioredoxin DE8555_RS07820 PF02683 Cytochrome C biogenesis protein transmembrane region DE8555_RS07820 PF11412 Disulphide bond corrector protein DsbC DE8555_RS07835 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DE8555_RS07850 PF02913 FAD linked oxidases, C-terminal domain DE8555_RS07850 PF01565 FAD binding domain DE8555_RS07855 PF03797 Autotransporter beta-domain DE8555_RS07860 PF01668 SmpB protein DE8555_RS07865 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DE8555_RS07875 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DE8555_RS07875 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DE8555_RS07880 PF01161 Phosphatidylethanolamine-binding protein DE8555_RS07885 PF07687 Peptidase dimerisation domain DE8555_RS07885 PF01546 Peptidase family M20/M25/M40 DE8555_RS07890 PF10786 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) DE8555_RS07895 PF01814 Hemerythrin HHE cation binding domain DE8555_RS07900 PF00127 Copper binding proteins, plastocyanin/azurin family DE8555_RS07915 PF07516 SecA Wing and Scaffold domain DE8555_RS07915 PF07517 SecA DEAD-like domain DE8555_RS07915 PF01043 SecA preprotein cross-linking domain DE8555_RS07915 PF02810 SEC-C motif DE8555_RS07920 PF08278 DNA primase DnaG DnaB-binding DE8555_RS07920 PF10410 DnaB-helicase binding domain of primase DE8555_RS07920 PF08275 DNA primase catalytic core, N-terminal domain DE8555_RS07920 PF01807 CHC2 zinc finger DE8555_RS07925 PF04545 Sigma-70, region 4 DE8555_RS07925 PF04546 Sigma-70, non-essential region DE8555_RS07925 PF04539 Sigma-70 region 3 DE8555_RS07925 PF03979 Sigma-70 factor, region 1.1 DE8555_RS07925 PF04542 Sigma-70 region 2 DE8555_RS07925 PF00140 Sigma-70 factor, region 1.2 DE8555_RS07930 PF01609 Transposase DDE domain DE8555_RS07935 PF07715 TonB-dependent Receptor Plug Domain DE8555_RS07935 PF00593 TonB dependent receptor DE8555_RS07940 PF17483 C-lobe handle domain of Tf-binding protein B DE8555_RS07940 PF01298 C-lobe and N-lobe beta barrels of Tf-binding protein B DE8555_RS07940 PF17484 N-Lobe handle Tf-binding protein B DE8555_RS07955 PF00117 Glutamine amidotransferase class-I DE8555_RS07955 PF06418 CTP synthase N-terminus DE8555_RS07960 PF13193 AMP-binding enzyme C-terminal domain DE8555_RS07960 PF00501 AMP-binding enzyme DE8555_RS07975 PF01219 Prokaryotic diacylglycerol kinase DE8555_RS07980 PF02951 Prokaryotic glutathione synthetase, N-terminal domain DE8555_RS07980 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain DE8555_RS07985 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain DE8555_RS07985 PF00749 tRNA synthetases class I (E and Q), catalytic domain DE8555_RS07990 PF08220 DeoR-like helix-turn-helix domain DE8555_RS07990 PF00455 DeoR C terminal sensor domain DE8555_RS07995 PF03956 Lysine exporter LysO DE8555_RS08000 PF00392 Bacterial regulatory proteins, gntR family DE8555_RS08000 PF07729 FCD domain DE8555_RS08005 PF02566 OsmC-like protein DE8555_RS08015 PF00551 Formyl transferase DE8555_RS08020 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DE8555_RS08020 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DE8555_RS08030 PF00883 Cytosol aminopeptidase family, catalytic domain DE8555_RS08045 PF11791 Aconitate B N-terminal domain DE8555_RS08045 PF06434 Aconitate hydratase 2 N-terminus DE8555_RS08045 PF00330 Aconitase family (aconitate hydratase) DE8555_RS08050 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DE8555_RS08050 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DE8555_RS08055 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DE8555_RS08055 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DE8555_RS08065 PF10369 Small subunit of acetolactate synthase DE8555_RS08070 PF00205 Thiamine pyrophosphate enzyme, central domain DE8555_RS08070 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DE8555_RS08070 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DE8555_RS08080 PF02630 SCO1/SenC DE8555_RS08085 PF01634 ATP phosphoribosyltransferase DE8555_RS08095 PF00815 Histidinol dehydrogenase DE8555_RS08100 PF00155 Aminotransferase class I and II DE8555_RS08105 PF00475 Imidazoleglycerol-phosphate dehydratase DE8555_RS08110 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DE8555_RS08110 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DE8555_RS08135 PF08496 Peptidase family S49 N-terminal DE8555_RS08135 PF01343 Peptidase family S49 DE8555_RS08170 PF01066 CDP-alcohol phosphatidyltransferase DE8555_RS08180 PF02627 Carboxymuconolactone decarboxylase family DE8555_RS08185 PF12852 Cupin DE8555_RS08185 PF12833 Helix-turn-helix domain DE8555_RS08195 PF00892 EamA-like transporter family DE8555_RS08200 PF13416 Bacterial extracellular solute-binding protein DE8555_RS08205 PF01411 tRNA synthetases class II (A) DE8555_RS08205 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DE8555_RS08205 PF02272 DHHA1 domain DE8555_RS08215 PF00145 C-5 cytosine-specific DNA methylase DE8555_RS08225 PF01609 Transposase DDE domain DE8555_RS08230 PF02371 Transposase IS116/IS110/IS902 family DE8555_RS08230 PF01548 Transposase DE8555_RS08240 PF03595 Voltage-dependent anion channel DE8555_RS08245 PF00300 Histidine phosphatase superfamily (branch 1) DE8555_RS08250 PF00521 DNA gyrase/topoisomerase IV, subunit A DE8555_RS08255 PF13188 PAS domain DE8555_RS08255 PF00989 PAS fold DE8555_RS08255 PF00512 His Kinase A (phospho-acceptor) domain DE8555_RS08255 PF13426 PAS domain DE8555_RS08255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DE8555_RS08260 PF02954 Bacterial regulatory protein, Fis family DE8555_RS08260 PF00158 Sigma-54 interaction domain DE8555_RS08260 PF02954 Bacterial regulatory protein, Fis family DE8555_RS08260 PF00072 Response regulator receiver domain DE8555_RS08260 PF00158 Sigma-54 interaction domain DE8555_RS08260 PF00072 Response regulator receiver domain DE8555_RS08265 PF04445 Putative SAM-dependent methyltransferase DE8555_RS08285 PF01053 Cys/Met metabolism PLP-dependent enzyme DE8555_RS08300 PF00497 Bacterial extracellular solute-binding proteins, family 3 DE8555_RS08305 PF05683 Fumarase C-terminus DE8555_RS08305 PF05681 Fumarate hydratase (Fumerase) DE8555_RS08310 PF02080 TrkA-C domain DE8555_RS08310 PF02254 TrkA-N domain DE8555_RS08330 PF08543 Phosphomethylpyrimidine kinase DE8555_RS08350 PF03848 Tellurite resistance protein TehB DE8555_RS08355 PF00075 RNase H DE8555_RS08370 PF17676 LD-carboxypeptidase C-terminal domain DE8555_RS08370 PF02016 LD-carboxypeptidase N-terminal domain DE8555_RS08375 PF00255 Glutathione peroxidase DE8555_RS08380 PF00115 Cytochrome C and Quinol oxidase polypeptide I DE8555_RS08390 PF07732 Multicopper oxidase DE8555_RS08395 PF07732 Multicopper oxidase DE8555_RS08400 PF03781 Sulfatase-modifying factor enzyme 1 DE8555_RS08405 PF02462 Opacity family porin protein DE8555_RS08415 PF00881 Nitroreductase family DE8555_RS08420 PF00884 Sulfatase DE8555_RS08420 PF08019 Phosphoethanolamine transferase EptA/EptB DE8555_RS08430 PF00266 Aminotransferase class-V DE8555_RS08435 PF02576 RimP N-terminal domain DE8555_RS08435 PF17384 RimP C-terminal SH3 domain DE8555_RS08440 PF13184 NusA-like KH domain DE8555_RS08440 PF08529 NusA N-terminal domain DE8555_RS08445 PF11987 Translation-initiation factor 2 DE8555_RS08445 PF00009 Elongation factor Tu GTP binding domain DE8555_RS08445 PF04760 Translation initiation factor IF-2, N-terminal region DE8555_RS08450 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DE8555_RS08450 PF01926 50S ribosome-binding GTPase DE8555_RS08455 PF11067 Protein of unknown function (DUF2868) DE8555_RS08460 PF03006 Haemolysin-III related DE8555_RS08465 PF01235 Sodium:alanine symporter family DE8555_RS08470 PF01709 Transcriptional regulator DE8555_RS08475 PF02600 Disulfide bond formation protein DsbB DE8555_RS08485 PF01037 Lrp/AsnC ligand binding domain DE8555_RS08490 PF00842 Alanine racemase, C-terminal domain DE8555_RS08490 PF01168 Alanine racemase, N-terminal domain DE8555_RS08495 PF05167 Uncharacterised ACR (DUF711) DE8555_RS08510 PF05175 Methyltransferase small domain DE8555_RS08525 PF10531 SLBB domain DE8555_RS08565 PF04127 DNA / pantothenate metabolism flavoprotein DE8555_RS08565 PF02441 Flavoprotein DE8555_RS08570 PF04607 Region found in RelA / SpoT proteins DE8555_RS08570 PF02824 TGS domain DE8555_RS08570 PF13291 ACT domain DE8555_RS08575 PF01192 RNA polymerase Rpb6 DE8555_RS08580 PF00625 Guanylate kinase DE8555_RS08585 PF00156 Phosphoribosyl transferase domain DE8555_RS08600 PF16325 Peptidase family U32 C-terminal domain DE8555_RS08600 PF01136 Peptidase family U32 DE8555_RS08620 PF00593 TonB dependent receptor DE8555_RS08620 PF07715 TonB-dependent Receptor Plug Domain DE8555_RS08630 PF04403 Paraquat-inducible protein A DE8555_RS08635 PF02470 MlaD protein DE8555_RS08665 PF02347 Glycine cleavage system P-protein DE8555_RS08675 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DE8555_RS08685 PF00155 Aminotransferase class I and II DE8555_RS08690 PF05958 tRNA (Uracil-5-)-methyltransferase DE8555_RS08695 PF01264 Chorismate synthase DE8555_RS08705 PF00204 DNA gyrase B DE8555_RS08705 PF00986 DNA gyrase B subunit, carboxyl terminus DE8555_RS08705 PF01751 Toprim domain DE8555_RS08705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DE8555_RS08710 PF00293 NUDIX domain DE8555_RS08715 PF02403 Seryl-tRNA synthetase N-terminal domain DE8555_RS08715 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DE8555_RS08720 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DE8555_RS08720 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DE8555_RS08725 PF03462 PCRF domain DE8555_RS08725 PF00472 RF-1 domain DE8555_RS08735 PF17763 Glutaminase/Asparaginase C-terminal domain DE8555_RS08735 PF00710 Asparaginase, N-terminal DE8555_RS08740 PF09335 SNARE associated Golgi protein DE8555_RS08745 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DE8555_RS08745 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DE8555_RS08745 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DE8555_RS08745 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DE8555_RS08750 PF00809 Pterin binding enzyme DE8555_RS08760 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase DE8555_RS08780 PF12762 ISXO2-like transposase domain DE8555_RS08795 PF00535 Glycosyl transferase family 2 DE8555_RS08810 PF00209 Sodium:neurotransmitter symporter family DE8555_RS08815 PF01609 Transposase DDE domain DE8555_RS08825 PF00303 Thymidylate synthase DE8555_RS08830 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DE8555_RS08830 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DE8555_RS08845 PF07729 FCD domain DE8555_RS08845 PF00392 Bacterial regulatory proteins, gntR family DE8555_RS08850 PF02652 L-lactate permease DE8555_RS08860 PF02321 Outer membrane efflux protein DE8555_RS08865 PF00873 AcrB/AcrD/AcrF family DE8555_RS08870 PF00529 HlyD membrane-fusion protein of T1SS DE8555_RS08870 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DE8555_RS08875 PF08361 MAATS-type transcriptional repressor, C-terminal region DE8555_RS08875 PF00440 Bacterial regulatory proteins, tetR family DE8555_RS08885 PF03806 AbgT putative transporter family DE8555_RS08890 PF17946 RecC C-terminal domain DE8555_RS08900 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP DE8555_RS08900 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DE8555_RS08915 PF00115 Cytochrome C and Quinol oxidase polypeptide I DE8555_RS08925 PF04273 Putative phosphatase (DUF442) DE8555_RS08925 PF00753 Metallo-beta-lactamase superfamily DE8555_RS08930 PF02472 Biopolymer transport protein ExbD/TolR DE8555_RS08935 PF01618 MotA/TolQ/ExbB proton channel family DE8555_RS08940 PF03544 Gram-negative bacterial TonB protein C-terminal DE8555_RS08945 PF02163 Peptidase family M50 DE8555_RS08960 PF04399 Glutaredoxin 2, C terminal domain DE8555_RS08960 PF13417 Glutathione S-transferase, N-terminal domain DE8555_RS08965 PF13291 ACT domain DE8555_RS08965 PF04607 Region found in RelA / SpoT proteins DE8555_RS08965 PF02824 TGS domain DE8555_RS08975 PF02321 Outer membrane efflux protein DE8555_RS09060 PF08241 Methyltransferase domain DE8555_RS09065 PF04301 Protein of unknown function (DUF452) DE8555_RS09070 PF00155 Aminotransferase class I and II DE8555_RS09075 PF05958 tRNA (Uracil-5-)-methyltransferase DE8555_RS09080 PF01476 LysM domain DE8555_RS09080 PF03734 L,D-transpeptidase catalytic domain DE8555_RS09085 PF00939 Sodium:sulfate symporter transmembrane region DE8555_RS09090 PF00491 Arginase family DE8555_RS09095 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DE8555_RS09095 PF17810 Arginine decarboxylase helical bundle domain DE8555_RS09095 PF17944 Arginine decarboxylase C-terminal helical extension DE8555_RS09105 PF02938 GAD domain DE8555_RS09105 PF01336 OB-fold nucleic acid binding domain DE8555_RS09105 PF00152 tRNA synthetases class II (D, K and N) DE8555_RS09120 PF01649 Ribosomal protein S20 DE8555_RS09125 PF13416 Bacterial extracellular solute-binding protein DE8555_RS09180 PF07715 TonB-dependent Receptor Plug Domain DE8555_RS09180 PF00593 TonB dependent receptor DE8555_RS09185 PF17484 N-Lobe handle Tf-binding protein B DE8555_RS09185 PF01298 C-lobe and N-lobe beta barrels of Tf-binding protein B DE8555_RS09185 PF17483 C-lobe handle domain of Tf-binding protein B DE8555_RS09195 PF01177 Asp/Glu/Hydantoin racemase DE8555_RS09200 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DE8555_RS09205 PF01520 N-acetylmuramoyl-L-alanine amidase DE8555_RS09205 PF11741 AMIN domain DE8555_RS09215 PF02926 THUMP domain DE8555_RS09215 PF01170 Putative RNA methylase family UPF0020 DE8555_RS09230 PF01648 4'-phosphopantetheinyl transferase superfamily DE8555_RS09245 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ DE8555_RS09250 PF11967 Recombination protein O N terminal DE8555_RS09250 PF02565 Recombination protein O C terminal DE8555_RS09255 PF01817 Chorismate mutase type II DE8555_RS09255 PF01842 ACT domain DE8555_RS09255 PF00800 Prephenate dehydratase DE8555_RS09260 PF07690 Major Facilitator Superfamily DE8555_RS09265 PF00892 EamA-like transporter family DE8555_RS09320 PF02462 Opacity family porin protein DE8555_RS09325 PF00795 Carbon-nitrogen hydrolase DE8555_RS09330 PF01842 ACT domain DE8555_RS09330 PF02153 Prephenate dehydrogenase DE8555_RS09345 PF02082 Transcriptional regulator DE8555_RS09350 PF01300 Telomere recombination DE8555_RS09355 PF00871 Acetokinase family DE8555_RS09360 PF04303 PrpF protein DE8555_RS09365 PF00694 Aconitase C-terminal domain DE8555_RS09365 PF00330 Aconitase family (aconitate hydratase) DE8555_RS09370 PF05684 Protein of unknown function (DUF819) DE8555_RS09380 PF00285 Citrate synthase, C-terminal domain DE8555_RS09395 PF00860 Permease family DE8555_RS09400 PF00091 Tubulin/FtsZ family, GTPase domain DE8555_RS09400 PF12327 FtsZ family, C-terminal domain DE8555_RS09405 PF02491 SHS2 domain inserted in FTSA DE8555_RS09410 PF03799 Cell division protein FtsQ DE8555_RS09410 PF08478 POTRA domain, FtsQ-type DE8555_RS09415 PF01820 D-ala D-ala ligase N-terminus DE8555_RS09415 PF07478 D-ala D-ala ligase C-terminus DE8555_RS09420 PF02875 Mur ligase family, glutamate ligase domain DE8555_RS09420 PF01225 Mur ligase family, catalytic domain DE8555_RS09420 PF08245 Mur ligase middle domain DE8555_RS09425 PF03033 Glycosyltransferase family 28 N-terminal domain DE8555_RS09425 PF04101 Glycosyltransferase family 28 C-terminal domain DE8555_RS09430 PF01098 Cell cycle protein DE8555_RS09435 PF02875 Mur ligase family, glutamate ligase domain DE8555_RS09435 PF08245 Mur ligase middle domain DE8555_RS09445 PF00953 Glycosyl transferase family 4 DE8555_RS09455 PF02875 Mur ligase family, glutamate ligase domain DE8555_RS09455 PF01225 Mur ligase family, catalytic domain DE8555_RS09455 PF08245 Mur ligase middle domain DE8555_RS09460 PF00884 Sulfatase DE8555_RS09465 PF08245 Mur ligase middle domain DE8555_RS09465 PF02875 Mur ligase family, glutamate ligase domain DE8555_RS09465 PF01225 Mur ligase family, catalytic domain DE8555_RS09470 PF03717 Penicillin-binding Protein dimerisation domain DE8555_RS09470 PF00905 Penicillin binding protein transpeptidase domain DE8555_RS09475 PF04999 Cell division protein FtsL DE8555_RS09480 PF01795 MraW methylase family DE8555_RS09485 PF02381 MraZ protein, putative antitoxin-like DE8555_RS09505 PF02673 Bacitracin resistance protein BacA DE8555_RS09510 PF01323 DSBA-like thioredoxin domain DE8555_RS09520 PF01078 Magnesium chelatase, subunit ChlI DE8555_RS09520 PF13335 Magnesium chelatase, subunit ChlI C-terminal DE8555_RS09525 PF04380 Membrane fusogenic activity DE8555_RS09535 PF00474 Sodium:solute symporter family DE8555_RS09540 PF18327 Proline utilization A proline dehydrogenase N-terminal domain DE8555_RS09540 PF14850 DNA-binding domain of Proline dehydrogenase DE8555_RS09540 PF01619 Proline dehydrogenase DE8555_RS09540 PF00171 Aldehyde dehydrogenase family DE8555_RS09545 PF01548 Transposase DE8555_RS09545 PF02371 Transposase IS116/IS110/IS902 family DE8555_RS09550 PF03372 Endonuclease/Exonuclease/phosphatase family DE8555_RS09555 PF01022 Bacterial regulatory protein, arsR family DE8555_RS09565 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DE8555_RS09565 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DE8555_RS09575 PF02445 Quinolinate synthetase A protein DE8555_RS09580 PF00890 FAD binding domain DE8555_RS09590 PF01609 Transposase DDE domain DE8555_RS09595 PF01609 Transposase DDE domain DE8555_RS09600 PF13419 Haloacid dehalogenase-like hydrolase DE8555_RS09605 PF03633 Glycosyl hydrolase family 65, C-terminal domain DE8555_RS09605 PF03632 Glycosyl hydrolase family 65 central catalytic domain DE8555_RS09605 PF03636 Glycosyl hydrolase family 65, N-terminal domain DE8555_RS09610 PF01263 Aldose 1-epimerase DE8555_RS09620 PF00005 ABC transporter DE8555_RS09620 PF12848 ABC transporter DE8555_RS09625 PF04608 Phosphatidylglycerophosphatase A DE8555_RS09630 PF00586 AIR synthase related protein, N-terminal domain DE8555_RS09630 PF02769 AIR synthase related protein, C-terminal domain DE8555_RS09645 PF00691 OmpA family DE8555_RS09650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DE8555_RS09650 PF03466 LysR substrate binding domain DE8555_RS09655 PF00027 Cyclic nucleotide-binding domain DE8555_RS09655 PF13545 Crp-like helix-turn-helix domain DE8555_RS09660 PF04055 Radical SAM superfamily DE8555_RS09660 PF06969 HemN C-terminal domain DE8555_RS09665 PF01384 Phosphate transporter family DE8555_RS09675 PF03702 Anhydro-N-acetylmuramic acid kinase DE8555_RS09735 PF06594 Haemolysin-type calcium binding protein related domain DE8555_RS09735 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) DE8555_RS09745 PF01541 GIY-YIG catalytic domain DE8555_RS09750 PF07690 Major Facilitator Superfamily DE8555_RS09755 PF03951 Glutamine synthetase, beta-Grasp domain DE8555_RS09755 PF00120 Glutamine synthetase, catalytic domain DE8555_RS09765 PF01488 Shikimate / quinate 5-dehydrogenase DE8555_RS09765 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DE8555_RS09765 PF08501 Shikimate dehydrogenase substrate binding domain DE8555_RS09770 PF00912 Transglycosylase DE8555_RS09780 PF12399 Branched-chain amino acid ATP-binding cassette transporter DE8555_RS09780 PF00005 ABC transporter DE8555_RS09785 PF03968 OstA-like protein DE8555_RS09800 PF00571 CBS domain DE8555_RS09800 PF01380 SIS domain DE8555_RS09805 PF00923 Transaldolase/Fructose-6-phosphate aldolase DE8555_RS09815 PF00749 tRNA synthetases class I (E and Q), catalytic domain DE8555_RS09820 PF01207 Dihydrouridine synthase (Dus) DE8555_RS09825 PF02580 D-Tyr-tRNA(Tyr) deacylase DE8555_RS09845 PF03795 YCII-related domain DE8555_RS09850 PF04279 Intracellular septation protein A DE8555_RS09865 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DE8555_RS09870 PF18073 Rubredoxin metal binding domain DE8555_RS09885 PF01063 Amino-transferase class IV DE8555_RS09895 PF14602 Hexapeptide repeat of succinyl-transferase DE8555_RS09895 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal DE8555_RS09905 PF00342 Phosphoglucose isomerase DE8555_RS09910 PF00482 Type II secretion system (T2SS), protein F DE8555_RS09915 PF01478 Type IV leader peptidase family DE8555_RS09915 PF06750 Bacterial Peptidase A24 N-terminal domain DE8555_RS09920 PF01121 Dephospho-CoA kinase DE8555_RS09925 PF03884 DNA gyrase inhibitor YacG DE8555_RS09930 PF00437 Type II/IV secretion system protein DE8555_RS09930 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DE8555_RS09940 PF04284 Protein of unknown function (DUF441) DE8555_RS09945 PF00348 Polyprenyl synthetase DE8555_RS09950 PF00829 Ribosomal prokaryotic L21 protein DE8555_RS09955 PF01016 Ribosomal L27 protein DE8555_RS09960 PF01494 FAD binding domain DE8555_RS09965 PF00471 Ribosomal protein L33 DE8555_RS09970 PF00830 Ribosomal L28 family DE8555_RS09980 PF07690 Major Facilitator Superfamily DE8555_RS09985 PF13533 Biotin-lipoyl like DE8555_RS09990 PF14489 QueF-like protein DE8555_RS09995 PF02592 Putative vitamin uptake transporter DE8555_RS10000 PF01551 Peptidase family M23 DE8555_RS10000 PF01476 LysM domain DE8555_RS10000 PF08525 Opacity-associated protein A N-terminal motif DE8555_RS10010 PF04575 Protein of unknown function (DUF560) DE8555_RS10030 PF03653 Uncharacterised protein family (UPF0093) DE8555_RS10035 PF01928 CYTH domain DE8555_RS10040 PF00186 Dihydrofolate reductase DE8555_RS10045 PF00793 DAHP synthetase I family DE8555_RS10065 PF10531 SLBB domain DE8555_RS10105 PF02978 Signal peptide binding domain DE8555_RS10105 PF00448 SRP54-type protein, GTPase domain DE8555_RS10105 PF02881 SRP54-type protein, helical bundle domain DE8555_RS10110 PF00085 Thioredoxin DE8555_RS10110 PF01323 DSBA-like thioredoxin domain DE8555_RS10120 PF07715 TonB-dependent Receptor Plug Domain DE8555_RS10120 PF00593 TonB dependent receptor DE8555_RS10130 PF07681 DoxX DE8555_RS10135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DE8555_RS10135 PF03466 LysR substrate binding domain DE8555_RS10140 PF03441 FAD binding domain of DNA photolyase DE8555_RS10140 PF00875 DNA photolyase DE8555_RS10145 PF01609 Transposase DDE domain DE8555_RS10150 PF02810 SEC-C motif DE8555_RS10155 PF00459 Inositol monophosphatase family DE8555_RS10160 PF04452 RNA methyltransferase DE8555_RS10165 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) DE8555_RS10175 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) DE8555_RS10180 PF00535 Glycosyl transferase family 2 DE8555_RS10185 PF02092 Glycyl-tRNA synthetase beta subunit DE8555_RS10185 PF05746 DALR anticodon binding domain DE8555_RS10190 PF02091 Glycyl-tRNA synthetase alpha subunit DE8555_RS10195 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DE8555_RS10195 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain DE8555_RS10200 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DE8555_RS10200 PF02874 ATP synthase alpha/beta family, beta-barrel domain DE8555_RS10205 PF00231 ATP synthase DE8555_RS10210 PF00306 ATP synthase alpha/beta chain, C terminal domain DE8555_RS10210 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DE8555_RS10210 PF02874 ATP synthase alpha/beta family, beta-barrel domain DE8555_RS10215 PF00213 ATP synthase delta (OSCP) subunit DE8555_RS10220 PF00430 ATP synthase B/B' CF(0) DE8555_RS10225 PF00137 ATP synthase subunit C DE8555_RS10230 PF00119 ATP synthase A chain DE8555_RS10250 PF02195 ParB-like nuclease domain DE8555_RS10250 PF17762 HTH domain found in ParB protein DE8555_RS10260 PF02441 Flavoprotein DE8555_RS10265 PF03180 NLPA lipoprotein DE8555_RS10270 PF00528 Binding-protein-dependent transport system inner membrane component DE8555_RS10275 PF00005 ABC transporter DE8555_RS10275 PF09383 NIL domain DE8555_RS10280 PF01464 Transglycosylase SLT domain DE8555_RS10280 PF14718 Soluble lytic murein transglycosylase L domain DE8555_RS10285 PF01165 Ribosomal protein S21 DE8555_RS10290 PF09424 Yqey-like protein DE8555_RS10300 PF04386 Stringent starvation protein B DE8555_RS10305 PF00043 Glutathione S-transferase, C-terminal domain DE8555_RS10305 PF02798 Glutathione S-transferase, N-terminal domain DE8555_RS10320 PF01197 Ribosomal protein L31 DE8555_RS10330 PF14602 Hexapeptide repeat of succinyl-transferase DE8555_RS10330 PF00132 Bacterial transferase hexapeptide (six repeats) DE8555_RS10330 PF12464 Maltose acetyltransferase DE8555_RS10360 PF05494 MlaC protein DE8555_RS10365 PF02470 MlaD protein DE8555_RS10370 PF02405 Permease MlaE DE8555_RS10375 PF00005 ABC transporter DE8555_RS10390 PF00171 Aldehyde dehydrogenase family DE8555_RS10400 PF00082 Subtilase family DE8555_RS10400 PF03797 Autotransporter beta-domain DE8555_RS10405 PF04715 Anthranilate synthase component I, N terminal region DE8555_RS10405 PF00425 chorismate binding enzyme DE8555_RS10405 PF00117 Glutamine amidotransferase class-I DE8555_RS10410 PF04575 Protein of unknown function (DUF560) DE8555_RS10420 PF07715 TonB-dependent Receptor Plug Domain DE8555_RS10420 PF00593 TonB dependent receptor DE8555_RS10425 PF00118 TCP-1/cpn60 chaperonin family DE8555_RS10430 PF00166 Chaperonin 10 Kd subunit DE8555_RS10435 PF12762 ISXO2-like transposase domain DE8555_RS10440 PF00209 Sodium:neurotransmitter symporter family DE8555_RS10445 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DE8555_RS10445 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DE8555_RS10455 PF01491 Frataxin-like domain DE8555_RS10460 PF10008 Uncharacterized protein conserved in bacteria (DUF2251) DE8555_RS10465 PF02664 S-Ribosylhomocysteinase (LuxS) DE8555_RS10470 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DE8555_RS10470 PF00476 DNA polymerase family A DE8555_RS10470 PF01612 3'-5' exonuclease DE8555_RS10470 PF01367 5'-3' exonuclease, C-terminal SAM fold DE8555_RS10480 PF03212 Pertactin DE8555_RS10480 PF02395 Immunoglobulin A1 protease DE8555_RS10500 PF01926 50S ribosome-binding GTPase DE8555_RS10500 PF12631 MnmE helical domain DE8555_RS10500 PF10396 GTP-binding protein TrmE N-terminus DE8555_RS10530 PF01032 FecCD transport family DE8555_RS10535 PF01032 FecCD transport family DE8555_RS10545 PF00005 ABC transporter DE8555_RS10550 PF05658 Head domain of trimeric autotransporter adhesin DE8555_RS10550 PF03895 YadA-like membrane anchor domain DE8555_RS10555 PF00543 Nitrogen regulatory protein P-II DE8555_RS10560 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DE8555_RS10560 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal DE8555_RS10560 PF02769 AIR synthase related protein, C-terminal domain DE8555_RS10565 PF00753 Metallo-beta-lactamase superfamily DE8555_RS10565 PF16123 Hydroxyacylglutathione hydrolase C-terminus DE8555_RS10570 PF03212 Pertactin DE8555_RS10570 PF02395 Immunoglobulin A1 protease DE8555_RS10570 PF03797 Autotransporter beta-domain DE8555_RS10580 PF00571 CBS domain DE8555_RS10580 PF01769 Divalent cation transporter DE8555_RS10580 PF03448 MgtE intracellular N domain DE8555_RS10585 PF01430 Hsp33 protein DE8555_RS10590 PF00877 NlpC/P60 family DE8555_RS10605 PF04172 LrgB-like family DE8555_RS10610 PF01960 ArgJ family DE8555_RS10615 PF00654 Voltage gated chloride channel DE8555_RS10620 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold DE8555_RS10620 PF00270 DEAD/DEAH box helicase DE8555_RS10620 PF11898 Domain of unknown function (DUF3418) DE8555_RS10620 PF00271 Helicase conserved C-terminal domain DE8555_RS10620 PF04408 Helicase associated domain (HA2) DE8555_RS10635 PF00270 DEAD/DEAH box helicase DE8555_RS10635 PF11898 Domain of unknown function (DUF3418) DE8555_RS10635 PF04408 Helicase associated domain (HA2) DE8555_RS10635 PF00271 Helicase conserved C-terminal domain DE8555_RS10635 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold DE8555_RS10640 PF03852 DNA mismatch endonuclease Vsr DE8555_RS10650 PF00145 C-5 cytosine-specific DNA methylase DE8555_RS10670 PF07963 Prokaryotic N-terminal methylation motif DE8555_RS10670 PF08334 Type II secretion system (T2SS), protein G DE8555_RS10675 PF10531 SLBB domain DE8555_RS10710 PF00849 RNA pseudouridylate synthase DE8555_RS10715 PF01467 Cytidylyltransferase-like DE8555_RS10720 PF01027 Inhibitor of apoptosis-promoting Bax1 DE8555_RS10725 PF04362 Bacterial Fe(2+) trafficking DE8555_RS10730 PF02590 Predicted SPOUT methyltransferase DE8555_RS10740 PF01467 Cytidylyltransferase-like DE8555_RS10745 PF00484 Carbonic anhydrase DE8555_RS10750 PF00528 Binding-protein-dependent transport system inner membrane component DE8555_RS10755 PF02447 GntP family permease DE8555_RS10765 PF01636 Phosphotransferase enzyme family DE8555_RS10775 PF03222 Tryptophan/tyrosine permease family DE8555_RS10780 PF00534 Glycosyl transferases group 1 DE8555_RS10780 PF13439 Glycosyltransferase Family 4 DE8555_RS10785 PF00884 Sulfatase DE8555_RS10790 PF00132 Bacterial transferase hexapeptide (six repeats) DE8555_RS10815 PF01416 tRNA pseudouridine synthase DE8555_RS10830 PF00267 Gram-negative porin DE8555_RS10850 PF01964 Radical SAM ThiC family DE8555_RS10850 PF13667 ThiC-associated domain DE8555_RS10865 PF00005 ABC transporter DE8555_RS10865 PF08402 TOBE domain DE8555_RS10870 PF00391 PEP-utilising enzyme, mobile domain DE8555_RS10870 PF05524 PEP-utilising enzyme, N-terminal DE8555_RS10870 PF02896 PEP-utilising enzyme, TIM barrel domain DE8555_RS10875 PF00381 PTS HPr component phosphorylation site DE8555_RS10885 PF00156 Phosphoribosyl transferase domain DE8555_RS10890 PF14743 DNA ligase OB-like domain DE8555_RS10890 PF01068 ATP dependent DNA ligase domain DE8555_RS10895 PF00753 Metallo-beta-lactamase superfamily DE8555_RS10900 PF02646 RmuC family DE8555_RS10905 PF02167 Cytochrome C1 family DE8555_RS10910 PF00033 Cytochrome b/b6/petB DE8555_RS10910 PF00032 Cytochrome b(C-terminal)/b6/petD DE8555_RS10915 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal DE8555_RS10915 PF00355 Rieske [2Fe-2S] domain DE8555_RS10920 PF01784 NIF3 (NGG1p interacting factor 3) DE8555_RS10925 PF03466 LysR substrate binding domain DE8555_RS10925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DE8555_RS10930 PF00380 Ribosomal protein S9/S16 DE8555_RS10935 PF00572 Ribosomal protein L13 DE8555_RS10945 PF05164 Cell division protein ZapA DE8555_RS10955 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DE8555_RS10955 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DE8555_RS10960 PF00311 Phosphoenolpyruvate carboxylase DE8555_RS10965 PF00899 ThiF family DE8555_RS10975 PF04102 SlyX DE8555_RS10980 PF03553 Na+/H+ antiporter family DE8555_RS10980 PF13726 Na+-H+ antiporter family DE8555_RS10985 PF17827 PrmC N-terminal domain DE8555_RS10985 PF05175 Methyltransferase small domain DE8555_RS10990 PF01523 Putative modulator of DNA gyrase DE8555_RS11000 PF01266 FAD dependent oxidoreductase DE8555_RS11005 PF02581 Thiamine monophosphate synthase DE8555_RS11015 PF05690 Thiazole biosynthesis protein ThiG DE8555_RS11035 PF02237 Biotin protein ligase C terminal domain DE8555_RS11035 PF03099 Biotin/lipoate A/B protein ligase family DE8555_RS11035 PF03309 Type III pantothenate kinase DE8555_RS11040 PF01467 Cytidylyltransferase-like DE8555_RS11060 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DE8555_RS11060 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DE8555_RS11070 PF02774 Semialdehyde dehydrogenase, dimerisation domain DE8555_RS11070 PF01118 Semialdehyde dehydrogenase, NAD binding domain DE8555_RS11085 PF03372 Endonuclease/Exonuclease/phosphatase family DE8555_RS11090 PF09190 DALR domain DE8555_RS11090 PF01406 tRNA synthetases class I (C) catalytic domain DE8555_RS11100 PF01018 GTP1/OBG DE8555_RS11100 PF01926 50S ribosome-binding GTPase DE8555_RS11105 PF01292 Prokaryotic cytochrome b561 DE8555_RS11110 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DE8555_RS11115 PF02021 Uncharacterised protein family UPF0102 DE8555_RS11120 PF13580 SIS domain DE8555_RS11135 PF00557 Metallopeptidase family M24 DE8555_RS11150 PF06039 Malate:quinone oxidoreductase (Mqo) DE8555_RS11160 PF01812 5-formyltetrahydrofolate cyclo-ligase family DE8555_RS11170 PF00318 Ribosomal protein S2 DE8555_RS11175 PF00889 Elongation factor TS DE8555_RS11180 PF00696 Amino acid kinase family DE8555_RS11285 PF01343 Peptidase family S49 DE8555_RS11290 PF18146 Damage-inducible protein CinA KH domain DE8555_RS11290 PF00994 Probable molybdopterin binding domain DE8555_RS11290 PF02464 Competence-damaged protein DE8555_RS11295 PF00764 Arginosuccinate synthase DE8555_RS11315 PF00375 Sodium:dicarboxylate symporter family DE8555_RS11320 PF17243 POTRA domain TamA domain 1 DE8555_RS11320 PF01103 Surface antigen DE8555_RS11330 PF00854 POT family DE8555_RS11345 PF03462 PCRF domain DE8555_RS11345 PF00472 RF-1 domain DE8555_RS11350 PF01734 Patatin-like phospholipase DE8555_RS11355 PF07681 DoxX DE8555_RS11365 PF05114 Protein of unknown function (DUF692) DE8555_RS11370 PF09836 Putative DNA-binding domain DE8555_RS11375 PF08281 Sigma-70, region 4 DE8555_RS11375 PF04542 Sigma-70 region 2 DE8555_RS11405 PF12762 ISXO2-like transposase domain DE8555_RS11410 PF01300 Telomere recombination DE8555_RS11415 PF02843 Phosphoribosylglycinamide synthetase, C domain DE8555_RS11415 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DE8555_RS11415 PF02844 Phosphoribosylglycinamide synthetase, N domain DE8555_RS11425 PF09186 Domain of unknown function (DUF1949) DE8555_RS11425 PF01205 Uncharacterized protein family UPF0029 DE8555_RS11430 PF00766 Electron transfer flavoprotein FAD-binding domain DE8555_RS11430 PF01012 Electron transfer flavoprotein domain DE8555_RS11435 PF01012 Electron transfer flavoprotein domain DE8555_RS11440 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DE8555_RS11445 PF00857 Isochorismatase family DE8555_RS11450 PF01980 tRNA-methyltransferase O DE8555_RS11450 PF18389 TrmO C-terminal domain DE8555_RS11455 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DE8555_RS11455 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DE8555_RS11460 PF01624 MutS domain I DE8555_RS11460 PF05188 MutS domain II DE8555_RS11460 PF05192 MutS domain III DE8555_RS11460 PF05190 MutS family domain IV DE8555_RS11460 PF00488 MutS domain V