locus-tag class description CYG48_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix CYG48_RS00005 PF00308 Bacterial dnaA protein CYG48_RS00005 PF11638 DnaA N-terminal domain CYG48_RS00015 PF06969 HemN C-terminal domain CYG48_RS00015 PF04055 Radical SAM superfamily CYG48_RS00020 PF01725 Ham1 family CYG48_RS00030 PF03725 3' exoribonuclease family, domain 2 CYG48_RS00030 PF01138 3' exoribonuclease family, domain 1 CYG48_RS00035 PF01628 HrcA protein C terminal domain CYG48_RS00040 PF01025 GrpE CYG48_RS00045 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CYG48_RS00050 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CYG48_RS00050 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus CYG48_RS00055 PF00309 Sigma-54 factor, Activator interacting domain (AID) CYG48_RS00055 PF04963 Sigma-54 factor, core binding domain CYG48_RS00055 PF04552 Sigma-54, DNA binding domain CYG48_RS00060 PF00005 ABC transporter CYG48_RS00065 PF03968 OstA-like protein CYG48_RS00075 PF01343 Peptidase family S49 CYG48_RS00075 PF06965 Na+/H+ antiporter 1 CYG48_RS00080 PF00216 Bacterial DNA-binding protein CYG48_RS00095 PF10672 S-adenosylmethionine-dependent methyltransferase CYG48_RS00095 PF02926 THUMP domain CYG48_RS00095 PF01170 Putative RNA methylase family UPF0020 CYG48_RS00100 PF08032 RNA 2'-O ribose methyltransferase substrate binding CYG48_RS00100 PF00588 SpoU rRNA Methylase family CYG48_RS00105 PF01252 Signal peptidase (SPase) II CYG48_RS00110 PF00672 HAMP domain CYG48_RS00110 PF01627 Hpt domain CYG48_RS00110 PF00512 His Kinase A (phospho-acceptor) domain CYG48_RS00110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG48_RS00110 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CYG48_RS00110 PF00072 Response regulator receiver domain CYG48_RS00120 PF01515 Phosphate acetyl/butaryl transferase CYG48_RS00120 PF03949 Malic enzyme, NAD binding domain CYG48_RS00120 PF00390 Malic enzyme, N-terminal domain CYG48_RS00125 PF05192 MutS domain III CYG48_RS00125 PF00488 MutS domain V CYG48_RS00125 PF05188 MutS domain II CYG48_RS00125 PF05190 MutS family domain IV CYG48_RS00125 PF01624 MutS domain I CYG48_RS00130 PF01842 ACT domain CYG48_RS00130 PF08335 GlnD PII-uridylyltransferase CYG48_RS00130 PF01966 HD domain CYG48_RS00130 PF01909 Nucleotidyltransferase domain CYG48_RS00135 PF03023 Lipid II flippase MurJ CYG48_RS00145 PF00579 tRNA synthetases class I (W and Y) CYG48_RS00155 PF01106 NifU-like domain CYG48_RS00160 PF00814 Glycoprotease family CYG48_RS00165 PF00583 Acetyltransferase (GNAT) family CYG48_RS00170 PF01475 Ferric uptake regulator family CYG48_RS00180 PF01938 TRAM domain CYG48_RS00180 PF04055 Radical SAM superfamily CYG48_RS00180 PF00919 Uncharacterized protein family UPF0004 CYG48_RS00185 PF02562 PhoH-like protein CYG48_RS00190 PF02130 Uncharacterized protein family UPF0054 CYG48_RS00195 PF00571 CBS domain CYG48_RS00195 PF03471 Transporter associated domain CYG48_RS00200 PF00795 Carbon-nitrogen hydrolase CYG48_RS00205 PF01381 Helix-turn-helix CYG48_RS00210 PF02773 S-adenosylmethionine synthetase, C-terminal domain CYG48_RS00210 PF02772 S-adenosylmethionine synthetase, central domain CYG48_RS00210 PF00438 S-adenosylmethionine synthetase, N-terminal domain CYG48_RS00215 PF02390 Putative methyltransferase CYG48_RS00225 PF00011 Hsp20/alpha crystallin family CYG48_RS00230 PF00294 pfkB family carbohydrate kinase CYG48_RS00240 PF01327 Polypeptide deformylase CYG48_RS00245 PF00551 Formyl transferase CYG48_RS00245 PF02911 Formyl transferase, C-terminal domain CYG48_RS00250 PF01416 tRNA pseudouridine synthase CYG48_RS00260 PF01546 Peptidase family M20/M25/M40 CYG48_RS00260 PF07687 Peptidase dimerisation domain CYG48_RS00265 PF00132 Bacterial transferase hexapeptide (six repeats) CYG48_RS00265 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CYG48_RS00265 PF14602 Hexapeptide repeat of succinyl-transferase CYG48_RS00290 PF00696 Amino acid kinase family CYG48_RS00305 PF02469 Fasciclin domain CYG48_RS00310 PF01926 50S ribosome-binding GTPase CYG48_RS00315 PF14849 YidC periplasmic domain CYG48_RS00315 PF02096 60Kd inner membrane protein CYG48_RS00320 PF00825 Ribonuclease P CYG48_RS00325 PF00468 Ribosomal protein L34 CYG48_RS00330 PF00672 HAMP domain CYG48_RS00330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CYG48_RS00330 PF02203 Tar ligand binding domain homologue CYG48_RS00335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG48_RS00335 PF00512 His Kinase A (phospho-acceptor) domain CYG48_RS00355 PF05425 Copper resistance protein D CYG48_RS00360 PF04055 Radical SAM superfamily CYG48_RS00365 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase CYG48_RS00375 PF05544 Proline racemase CYG48_RS00385 PF01979 Amidohydrolase family CYG48_RS00390 PF00990 Diguanylate cyclase, GGDEF domain CYG48_RS00395 PF00156 Phosphoribosyl transferase domain CYG48_RS00400 PF00294 pfkB family carbohydrate kinase CYG48_RS00405 PF00342 Phosphoglucose isomerase CYG48_RS00415 PF00501 AMP-binding enzyme CYG48_RS00415 PF13193 AMP-binding enzyme C-terminal domain CYG48_RS00430 PF02540 NAD synthase CYG48_RS00435 PF00501 AMP-binding enzyme CYG48_RS00435 PF13193 AMP-binding enzyme C-terminal domain CYG48_RS00445 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CYG48_RS00445 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CYG48_RS00450 PF01266 FAD dependent oxidoreductase CYG48_RS00455 PF00701 Dihydrodipicolinate synthetase family CYG48_RS00470 PF08241 Methyltransferase domain CYG48_RS00480 PF03060 Nitronate monooxygenase CYG48_RS00490 PF03976 Polyphosphate kinase 2 (PPK2) CYG48_RS00495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG48_RS00495 PF16736 Single Cache-like CYG48_RS00495 PF00989 PAS fold CYG48_RS00495 PF00512 His Kinase A (phospho-acceptor) domain CYG48_RS00500 PF12849 PBP superfamily domain CYG48_RS00505 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS00510 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS00515 PF00005 ABC transporter CYG48_RS00520 PF01895 PhoU domain CYG48_RS00525 PF00486 Transcriptional regulatory protein, C terminal CYG48_RS00525 PF00072 Response regulator receiver domain CYG48_RS00545 PF00202 Aminotransferase class-III CYG48_RS00550 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CYG48_RS00550 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CYG48_RS00555 PF01430 Hsp33 protein CYG48_RS00560 PF04379 ApaG domain CYG48_RS00565 PF01053 Cys/Met metabolism PLP-dependent enzyme CYG48_RS00570 PF00692 dUTPase CYG48_RS00600 PF00196 Bacterial regulatory proteins, luxR family CYG48_RS00600 PF00072 Response regulator receiver domain CYG48_RS00615 PF01180 Dihydroorotate dehydrogenase CYG48_RS00620 PF01554 MatE CYG48_RS00635 PF08241 Methyltransferase domain CYG48_RS00650 PF08494 DEAD/H associated CYG48_RS00650 PF00271 Helicase conserved C-terminal domain CYG48_RS00650 PF00270 DEAD/DEAH box helicase CYG48_RS00670 PF01925 Sulfite exporter TauE/SafE CYG48_RS00680 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CYG48_RS00680 PF02770 Acyl-CoA dehydrogenase, middle domain CYG48_RS00680 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CYG48_RS00680 PF12806 Acetyl-CoA dehydrogenase C-terminal like CYG48_RS00685 PF02803 Thiolase, C-terminal domain CYG48_RS00685 PF00108 Thiolase, N-terminal domain CYG48_RS00690 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CYG48_RS00690 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CYG48_RS00690 PF00378 Enoyl-CoA hydratase/isomerase CYG48_RS00720 PF01232 Mannitol dehydrogenase Rossmann domain CYG48_RS00720 PF08125 Mannitol dehydrogenase C-terminal domain CYG48_RS00725 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CYG48_RS00725 PF13378 Enolase C-terminal domain-like CYG48_RS00735 PF08240 Alcohol dehydrogenase GroES-like domain CYG48_RS00735 PF00107 Zinc-binding dehydrogenase CYG48_RS00740 PF07729 FCD domain CYG48_RS00740 PF00392 Bacterial regulatory proteins, gntR family CYG48_RS00745 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus CYG48_RS00745 PF08666 SAF domain CYG48_RS00755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG48_RS00755 PF00512 His Kinase A (phospho-acceptor) domain CYG48_RS00755 PF00072 Response regulator receiver domain CYG48_RS00755 PF01627 Hpt domain CYG48_RS00755 PF00672 HAMP domain CYG48_RS00760 PF01741 Large-conductance mechanosensitive channel, MscL CYG48_RS00765 PF00155 Aminotransferase class I and II CYG48_RS00770 PF01370 NAD dependent epimerase/dehydratase family CYG48_RS00790 PF00072 Response regulator receiver domain CYG48_RS00790 PF00196 Bacterial regulatory proteins, luxR family CYG48_RS00795 PF00672 HAMP domain CYG48_RS00795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG48_RS00795 PF07730 Histidine kinase CYG48_RS00825 PF01531 Glycosyl transferase family 11 CYG48_RS00830 PF00005 ABC transporter CYG48_RS00830 PF00664 ABC transporter transmembrane region CYG48_RS00850 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CYG48_RS00855 PF00106 short chain dehydrogenase CYG48_RS00865 PF00815 Histidinol dehydrogenase CYG48_RS00870 PF06793 Uncharacterised protein family (UPF0262) CYG48_RS00880 PF01176 Translation initiation factor 1A / IF-1 CYG48_RS00885 PF02545 Maf-like protein CYG48_RS00890 PF03884 DNA gyrase inhibitor YacG CYG48_RS00905 PF00753 Metallo-beta-lactamase superfamily CYG48_RS00910 PF00308 Bacterial dnaA protein CYG48_RS00910 PF08299 Bacterial dnaA protein helix-turn-helix CYG48_RS00910 PF11638 DnaA N-terminal domain CYG48_RS00920 PF08450 SMP-30/Gluconolactonase/LRE-like region CYG48_RS00930 PF02245 Methylpurine-DNA glycosylase (MPG) CYG48_RS00940 PF07238 PilZ domain CYG48_RS00940 PF00535 Glycosyl transferase family 2 CYG48_RS00955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CYG48_RS00965 PF00072 Response regulator receiver domain CYG48_RS00970 PF02895 Signal transducing histidine kinase, homodimeric domain CYG48_RS00970 PF01584 CheW-like domain CYG48_RS00970 PF01627 Hpt domain CYG48_RS00970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG48_RS00975 PF01584 CheW-like domain CYG48_RS00980 PF03705 CheR methyltransferase, all-alpha domain CYG48_RS00980 PF01739 CheR methyltransferase, SAM binding domain CYG48_RS00985 PF00072 Response regulator receiver domain CYG48_RS00985 PF01339 CheB methylesterase CYG48_RS00990 PF00072 Response regulator receiver domain CYG48_RS00995 PF03975 CheD chemotactic sensory transduction CYG48_RS01005 PF01514 Secretory protein of YscJ/FliF family CYG48_RS01005 PF08345 Flagellar M-ring protein C-terminal CYG48_RS01010 PF00196 Bacterial regulatory proteins, luxR family CYG48_RS01010 PF03472 Autoinducer binding domain CYG48_RS01025 PF01312 FlhB HrpN YscU SpaS Family CYG48_RS01030 PF01706 FliG C-terminal domain CYG48_RS01030 PF14841 FliG middle domain CYG48_RS01030 PF14842 FliG N-terminal domain CYG48_RS01035 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CYG48_RS01040 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CYG48_RS01045 PF01618 MotA/TolQ/ExbB proton channel family CYG48_RS01055 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CYG48_RS01055 PF00460 Flagella basal body rod protein CYG48_RS01060 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CYG48_RS01060 PF18269 T3SS EscN ATPase C-terminal domain CYG48_RS01070 PF00460 Flagella basal body rod protein CYG48_RS01075 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CYG48_RS01080 PF02049 Flagellar hook-basal body complex protein FliE CYG48_RS01085 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CYG48_RS01085 PF00460 Flagella basal body rod protein CYG48_RS01090 PF13144 Chaperone for flagella basal body P-ring formation CYG48_RS01095 PF02119 Flagellar P-ring protein CYG48_RS01105 PF02107 Flagellar L-ring protein CYG48_RS01115 PF00813 FliP family CYG48_RS01130 PF00669 Bacterial flagellin N-terminal helical region CYG48_RS01130 PF00700 Bacterial flagellin C-terminal helical region CYG48_RS01150 PF01370 NAD dependent epimerase/dehydratase family CYG48_RS01155 PF00669 Bacterial flagellin N-terminal helical region CYG48_RS01155 PF00700 Bacterial flagellin C-terminal helical region CYG48_RS01160 PF00669 Bacterial flagellin N-terminal helical region CYG48_RS01160 PF00700 Bacterial flagellin C-terminal helical region CYG48_RS01170 PF13677 Membrane MotB of proton-channel complex MotA/MotB CYG48_RS01170 PF00691 OmpA family CYG48_RS01180 PF02120 Flagellar hook-length control protein FliK CYG48_RS01190 PF00486 Transcriptional regulatory protein, C terminal CYG48_RS01195 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CYG48_RS01195 PF07559 Flagellar basal body protein FlaE CYG48_RS01195 PF00460 Flagella basal body rod protein CYG48_RS01215 PF07378 Flagellar protein FlbT CYG48_RS01220 PF13860 FlgD Ig-like domain CYG48_RS01220 PF03963 Flagellar hook capping protein - N-terminal region CYG48_RS01220 PF13861 FlgD Tudor-like domain CYG48_RS01225 PF01313 Bacterial export proteins, family 3 CYG48_RS01230 PF00771 FHIPEP family CYG48_RS01235 PF01311 Bacterial export proteins, family 1 CYG48_RS01265 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CYG48_RS01265 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CYG48_RS01270 PF01547 Bacterial extracellular solute-binding protein CYG48_RS01275 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS01280 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS01285 PF00128 Alpha amylase, catalytic domain CYG48_RS01290 PF00005 ABC transporter CYG48_RS01290 PF17912 MalK OB fold domain CYG48_RS01290 PF03459 TOBE domain CYG48_RS01300 PF00920 Dehydratase family CYG48_RS01305 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CYG48_RS01310 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CYG48_RS01310 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CYG48_RS01315 PF01266 FAD dependent oxidoreductase CYG48_RS01320 PF00120 Glutamine synthetase, catalytic domain CYG48_RS01330 PF00672 HAMP domain CYG48_RS01330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CYG48_RS01345 PF00463 Isocitrate lyase family CYG48_RS01350 PF01381 Helix-turn-helix CYG48_RS01350 PF09856 Predicted transcriptional regulator (DUF2083) CYG48_RS01350 PF06114 IrrE N-terminal-like domain CYG48_RS01355 PF13416 Bacterial extracellular solute-binding protein CYG48_RS01360 PF08402 TOBE domain CYG48_RS01360 PF00005 ABC transporter CYG48_RS01365 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS01370 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS01375 PF13193 AMP-binding enzyme C-terminal domain CYG48_RS01375 PF00501 AMP-binding enzyme CYG48_RS01380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG48_RS01380 PF13188 PAS domain CYG48_RS01380 PF00512 His Kinase A (phospho-acceptor) domain CYG48_RS01380 PF00989 PAS fold CYG48_RS01380 PF13426 PAS domain CYG48_RS01400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG48_RS01400 PF03466 LysR substrate binding domain CYG48_RS01405 PF00171 Aldehyde dehydrogenase family CYG48_RS01415 PF02082 Transcriptional regulator CYG48_RS01430 PF01202 Shikimate kinase CYG48_RS01440 PF01266 FAD dependent oxidoreductase CYG48_RS01455 PF08220 DeoR-like helix-turn-helix domain CYG48_RS01455 PF00455 DeoR C terminal sensor domain CYG48_RS01460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG48_RS01460 PF00072 Response regulator receiver domain CYG48_RS01460 PF13426 PAS domain CYG48_RS01470 PF01547 Bacterial extracellular solute-binding protein CYG48_RS01475 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS01480 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS01485 PF00107 Zinc-binding dehydrogenase CYG48_RS01485 PF08240 Alcohol dehydrogenase GroES-like domain CYG48_RS01490 PF00005 ABC transporter CYG48_RS01490 PF17912 MalK OB fold domain CYG48_RS01500 PF01494 FAD binding domain CYG48_RS01510 PF01965 DJ-1/PfpI family CYG48_RS01525 PF02541 Ppx/GppA phosphatase family CYG48_RS01530 PF01728 FtsJ-like methyltransferase CYG48_RS01535 PF07690 Major Facilitator Superfamily CYG48_RS01540 PF00753 Metallo-beta-lactamase superfamily CYG48_RS01545 PF00571 CBS domain CYG48_RS01545 PF00478 IMP dehydrogenase / GMP reductase domain CYG48_RS01550 PF01738 Dienelactone hydrolase family CYG48_RS01555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG48_RS01555 PF03466 LysR substrate binding domain CYG48_RS01570 PF04107 Glutamate-cysteine ligase family 2(GCS2) CYG48_RS01575 PF04452 RNA methyltransferase CYG48_RS01580 PF01384 Phosphate transporter family CYG48_RS01595 PF17969 L,D-transpeptidase C-terminal domain CYG48_RS01595 PF03734 L,D-transpeptidase catalytic domain CYG48_RS01595 PF01476 LysM domain CYG48_RS01600 PF17969 L,D-transpeptidase C-terminal domain CYG48_RS01600 PF03734 L,D-transpeptidase catalytic domain CYG48_RS01605 PF03352 Methyladenine glycosylase CYG48_RS01625 PF13393 Histidyl-tRNA synthetase CYG48_RS01625 PF03129 Anticodon binding domain CYG48_RS01630 PF13393 Histidyl-tRNA synthetase CYG48_RS01635 PF01634 ATP phosphoribosyltransferase CYG48_RS01645 PF00999 Sodium/hydrogen exchanger family CYG48_RS01660 PF00118 TCP-1/cpn60 chaperonin family CYG48_RS01665 PF00166 Chaperonin 10 Kd subunit CYG48_RS01675 PF01687 Riboflavin kinase CYG48_RS01675 PF06574 FAD synthetase CYG48_RS01680 PF08264 Anticodon-binding domain of tRNA CYG48_RS01680 PF00133 tRNA synthetases class I (I, L, M and V) CYG48_RS01690 PF14437 MafB19-like deaminase CYG48_RS01695 PF01479 S4 domain CYG48_RS01695 PF00849 RNA pseudouridylate synthase CYG48_RS01705 PF01734 Patatin-like phospholipase CYG48_RS01710 PF00999 Sodium/hydrogen exchanger family CYG48_RS01710 PF02254 TrkA-N domain CYG48_RS01715 PF01523 Putative modulator of DNA gyrase CYG48_RS01720 PF00459 Inositol monophosphatase family CYG48_RS01730 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CYG48_RS01730 PF00534 Glycosyl transferases group 1 CYG48_RS01740 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CYG48_RS01750 PF08676 MutL C terminal dimerisation domain CYG48_RS01750 PF01119 DNA mismatch repair protein, C-terminal domain CYG48_RS01755 PF00072 Response regulator receiver domain CYG48_RS01760 PF00990 Diguanylate cyclase, GGDEF domain CYG48_RS01760 PF08447 PAS fold CYG48_RS01760 PF08448 PAS fold CYG48_RS01760 PF00563 EAL domain CYG48_RS01770 PF08450 SMP-30/Gluconolactonase/LRE-like region CYG48_RS01775 PF00196 Bacterial regulatory proteins, luxR family CYG48_RS01775 PF03472 Autoinducer binding domain CYG48_RS01780 PF01883 Iron-sulfur cluster assembly protein CYG48_RS01780 PF10609 NUBPL iron-transfer P-loop NTPase CYG48_RS01785 PF01544 CorA-like Mg2+ transporter protein CYG48_RS01790 PF02705 K+ potassium transporter CYG48_RS01800 PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter CYG48_RS01805 PF00119 ATP synthase A chain CYG48_RS01810 PF00137 ATP synthase subunit C CYG48_RS01815 PF00430 ATP synthase B/B' CF(0) CYG48_RS01820 PF00430 ATP synthase B/B' CF(0) CYG48_RS01825 PF01351 Ribonuclease HII CYG48_RS01840 PF00994 Probable molybdopterin binding domain CYG48_RS01845 PF00288 GHMP kinases N terminal domain CYG48_RS01845 PF08544 GHMP kinases C terminal CYG48_RS01855 PF00348 Polyprenyl synthetase CYG48_RS01870 PF01566 Natural resistance-associated macrophage protein CYG48_RS01875 PF01343 Peptidase family S49 CYG48_RS01875 PF06965 Na+/H+ antiporter 1 CYG48_RS01885 PF02091 Glycyl-tRNA synthetase alpha subunit CYG48_RS01890 PF04011 LemA family CYG48_RS01895 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CYG48_RS01905 PF05746 DALR anticodon binding domain CYG48_RS01905 PF02092 Glycyl-tRNA synthetase beta subunit CYG48_RS01910 PF00672 HAMP domain CYG48_RS01910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CYG48_RS01920 PF02844 Phosphoribosylglycinamide synthetase, N domain CYG48_RS01920 PF02843 Phosphoribosylglycinamide synthetase, C domain CYG48_RS01920 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CYG48_RS01925 PF17674 HHH domain CYG48_RS01925 PF09371 Tex-like protein N-terminal domain CYG48_RS01925 PF00575 S1 RNA binding domain CYG48_RS01925 PF16921 Tex protein YqgF-like domain CYG48_RS01935 PF01040 UbiA prenyltransferase family CYG48_RS01950 PF01565 FAD binding domain CYG48_RS01950 PF02913 FAD linked oxidases, C-terminal domain CYG48_RS01955 PF03481 Putative GTP-binding controlling metal-binding CYG48_RS01955 PF01300 Telomere recombination CYG48_RS01965 PF00355 Rieske [2Fe-2S] domain CYG48_RS01965 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CYG48_RS01970 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CYG48_RS01970 PF02770 Acyl-CoA dehydrogenase, middle domain CYG48_RS01970 PF12806 Acetyl-CoA dehydrogenase C-terminal like CYG48_RS01970 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CYG48_RS01985 PF05958 tRNA (Uracil-5-)-methyltransferase CYG48_RS01990 PF01479 S4 domain CYG48_RS01990 PF01728 FtsJ-like methyltransferase CYG48_RS01995 PF00672 HAMP domain CYG48_RS01995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CYG48_RS02005 PF02779 Transketolase, pyrimidine binding domain CYG48_RS02005 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CYG48_RS02005 PF02780 Transketolase, C-terminal domain CYG48_RS02010 PF05726 Pirin C-terminal cupin domain CYG48_RS02010 PF02678 Pirin CYG48_RS02035 PF16868 NMT1-like family CYG48_RS02040 PF02609 Exonuclease VII small subunit CYG48_RS02045 PF00850 Histone deacetylase domain CYG48_RS02055 PF02632 BioY family CYG48_RS02060 PF02361 Cobalt transport protein CYG48_RS02065 PF00005 ABC transporter CYG48_RS02070 PF06224 Winged helix DNA-binding domain CYG48_RS02075 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CYG48_RS02075 PF02806 Alpha amylase, C-terminal all-beta domain CYG48_RS02075 PF00128 Alpha amylase, catalytic domain CYG48_RS02080 PF00128 Alpha amylase, catalytic domain CYG48_RS02080 PF16657 Maltogenic Amylase, C-terminal domain CYG48_RS02085 PF11896 Domain of unknown function (DUF3416) CYG48_RS02085 PF00128 Alpha amylase, catalytic domain CYG48_RS02095 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CYG48_RS02095 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CYG48_RS02100 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CYG48_RS02100 PF00925 GTP cyclohydrolase II CYG48_RS02105 PF01264 Chorismate synthase CYG48_RS02110 PF00990 Diguanylate cyclase, GGDEF domain CYG48_RS02110 PF00563 EAL domain CYG48_RS02110 PF03707 Bacterial signalling protein N terminal repeat CYG48_RS02120 PF00300 Histidine phosphatase superfamily (branch 1) CYG48_RS02130 PF01556 DnaJ C terminal domain CYG48_RS02130 PF00226 DnaJ domain CYG48_RS02130 PF00684 DnaJ central domain CYG48_RS02140 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CYG48_RS02140 PF01243 Pyridoxamine 5'-phosphate oxidase CYG48_RS02150 PF01523 Putative modulator of DNA gyrase CYG48_RS02160 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CYG48_RS02160 PF02790 Cytochrome C oxidase subunit II, transmembrane domain CYG48_RS02165 PF00115 Cytochrome C and Quinol oxidase polypeptide I CYG48_RS02170 PF01040 UbiA prenyltransferase family CYG48_RS02180 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 CYG48_RS02185 PF00510 Cytochrome c oxidase subunit III CYG48_RS02190 PF02104 SURF1 family CYG48_RS02195 PF06993 Protein of unknown function (DUF1304) CYG48_RS02200 PF02401 LytB protein CYG48_RS02205 PF01636 Phosphotransferase enzyme family CYG48_RS02210 PF00075 RNase H CYG48_RS02220 PF00462 Glutaredoxin CYG48_RS02220 PF08534 Redoxin CYG48_RS02230 PF02622 Uncharacterized ACR, COG1678 CYG48_RS02240 PF15887 Putative zinc-binding metallo-peptidase CYG48_RS02240 PF10005 zinc-ribbon domain CYG48_RS02245 PF00563 EAL domain CYG48_RS02245 PF13188 PAS domain CYG48_RS02245 PF03707 Bacterial signalling protein N terminal repeat CYG48_RS02245 PF00990 Diguanylate cyclase, GGDEF domain CYG48_RS02250 PF13302 Acetyltransferase (GNAT) domain CYG48_RS02255 PF00675 Insulinase (Peptidase family M16) CYG48_RS02255 PF05193 Peptidase M16 inactive domain CYG48_RS02260 PF00291 Pyridoxal-phosphate dependent enzyme CYG48_RS02260 PF14821 Threonine synthase N terminus CYG48_RS02275 PF13419 Haloacid dehalogenase-like hydrolase CYG48_RS02300 PF18755 Restriction Enzyme Adenine Methylase Associated CYG48_RS02300 PF01555 DNA methylase CYG48_RS02320 PF00730 HhH-GPD superfamily base excision DNA repair protein CYG48_RS02320 PF14815 NUDIX domain CYG48_RS02335 PF02463 RecF/RecN/SMC N terminal domain CYG48_RS02340 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CYG48_RS02340 PF02896 PEP-utilising enzyme, TIM barrel domain CYG48_RS02340 PF00391 PEP-utilising enzyme, mobile domain CYG48_RS02365 PF00535 Glycosyl transferase family 2 CYG48_RS02370 PF00535 Glycosyl transferase family 2 CYG48_RS02380 PF00483 Nucleotidyl transferase CYG48_RS02385 PF04321 RmlD substrate binding domain CYG48_RS02390 PF16363 GDP-mannose 4,6 dehydratase CYG48_RS02395 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CYG48_RS02400 PF00535 Glycosyl transferase family 2 CYG48_RS02415 PF00005 ABC transporter CYG48_RS02445 PF00009 Elongation factor Tu GTP binding domain CYG48_RS02450 PF01507 Phosphoadenosine phosphosulfate reductase family CYG48_RS02455 PF01507 Phosphoadenosine phosphosulfate reductase family CYG48_RS02460 PF02082 Transcriptional regulator CYG48_RS02465 PF01272 Transcription elongation factor, GreA/GreB, C-term CYG48_RS02465 PF03449 Transcription elongation factor, N-terminal CYG48_RS02475 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS02480 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS02485 PF12857 TOBE-like domain CYG48_RS02485 PF00005 ABC transporter CYG48_RS02500 PF00732 GMC oxidoreductase CYG48_RS02500 PF05199 GMC oxidoreductase CYG48_RS02505 PF00171 Aldehyde dehydrogenase family CYG48_RS02510 PF12411 Choline sulfatase enzyme C terminal CYG48_RS02510 PF00884 Sulfatase CYG48_RS02515 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB CYG48_RS02520 PF01381 Helix-turn-helix CYG48_RS02525 PF00107 Zinc-binding dehydrogenase CYG48_RS02525 PF14765 Polyketide synthase dehydratase CYG48_RS02525 PF02801 Beta-ketoacyl synthase, C-terminal domain CYG48_RS02525 PF00109 Beta-ketoacyl synthase, N-terminal domain CYG48_RS02525 PF16197 Ketoacyl-synthetase C-terminal extension CYG48_RS02525 PF08659 KR domain CYG48_RS02525 PF08240 Alcohol dehydrogenase GroES-like domain CYG48_RS02525 PF00698 Acyl transferase domain CYG48_RS02525 PF00550 Phosphopantetheine attachment site CYG48_RS02555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG48_RS02555 PF03466 LysR substrate binding domain CYG48_RS02560 PF02798 Glutathione S-transferase, N-terminal domain CYG48_RS02580 PF00990 Diguanylate cyclase, GGDEF domain CYG48_RS02580 PF13426 PAS domain CYG48_RS02580 PF00563 EAL domain CYG48_RS02590 PF07690 Major Facilitator Superfamily CYG48_RS02600 PF04679 ATP dependent DNA ligase C terminal region CYG48_RS02600 PF01068 ATP dependent DNA ligase domain CYG48_RS02600 PF04675 DNA ligase N terminus CYG48_RS02610 PF03734 L,D-transpeptidase catalytic domain CYG48_RS02610 PF17969 L,D-transpeptidase C-terminal domain CYG48_RS02615 PF17969 L,D-transpeptidase C-terminal domain CYG48_RS02615 PF03734 L,D-transpeptidase catalytic domain CYG48_RS02620 PF01047 MarR family CYG48_RS02625 PF02566 OsmC-like protein CYG48_RS02650 PF08274 PhnA Zinc-Ribbon CYG48_RS02650 PF03831 PhnA domain CYG48_RS02655 PF05872 Bacterial protein of unknown function (DUF853) CYG48_RS02660 PF03631 Virulence factor BrkB CYG48_RS02670 PF01544 CorA-like Mg2+ transporter protein CYG48_RS02685 PF00248 Aldo/keto reductase family CYG48_RS02690 PF00248 Aldo/keto reductase family CYG48_RS02695 PF07690 Major Facilitator Superfamily CYG48_RS02700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG48_RS02700 PF03466 LysR substrate binding domain CYG48_RS02710 PF01063 Amino-transferase class IV CYG48_RS02725 PF01925 Sulfite exporter TauE/SafE CYG48_RS02730 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CYG48_RS02730 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CYG48_RS02755 PF01810 LysE type translocator CYG48_RS02760 PF01322 Cytochrome C' CYG48_RS02765 PF00034 Cytochrome c CYG48_RS02800 PF00326 Prolyl oligopeptidase family CYG48_RS02800 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CYG48_RS02815 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CYG48_RS02820 PF03006 Haemolysin-III related CYG48_RS02840 PF01263 Aldose 1-epimerase CYG48_RS02845 PF03466 LysR substrate binding domain CYG48_RS02845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG48_RS02850 PF01810 LysE type translocator CYG48_RS02855 PF00440 Bacterial regulatory proteins, tetR family CYG48_RS02865 PF01641 SelR domain CYG48_RS02870 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CYG48_RS02870 PF00361 Proton-conducting membrane transporter CYG48_RS02870 PF13244 Domain of unknown function (DUF4040) CYG48_RS02875 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter CYG48_RS02880 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CYG48_RS02885 PF00361 Proton-conducting membrane transporter CYG48_RS02890 PF01899 Na+/H+ ion antiporter subunit CYG48_RS02895 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) CYG48_RS02900 PF03334 Na+/H+ antiporter subunit CYG48_RS02905 PF05443 ROS/MUCR transcriptional regulator protein CYG48_RS02910 PF08299 Bacterial dnaA protein helix-turn-helix CYG48_RS02910 PF00308 Bacterial dnaA protein CYG48_RS02920 PF02657 Fe-S metabolism associated domain CYG48_RS02925 PF17264 Family of unknown function (DUF5330) CYG48_RS02930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG48_RS02930 PF00512 His Kinase A (phospho-acceptor) domain CYG48_RS02965 PF01381 Helix-turn-helix CYG48_RS02970 PF00912 Transglycosylase CYG48_RS02970 PF00905 Penicillin binding protein transpeptidase domain CYG48_RS02975 PF03692 Putative zinc- or iron-chelating domain CYG48_RS02990 PF05016 ParE toxin of type II toxin-antitoxin system, parDE CYG48_RS02995 PF00403 Heavy-metal-associated domain CYG48_RS03000 PF00376 MerR family regulatory protein CYG48_RS03000 PF09278 MerR, DNA binding CYG48_RS03010 PF13505 Outer membrane protein beta-barrel domain CYG48_RS03015 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CYG48_RS03050 PF04860 Phage portal protein CYG48_RS03105 PF00486 Transcriptional regulatory protein, C terminal CYG48_RS03105 PF00072 Response regulator receiver domain CYG48_RS03110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG48_RS03125 PF03100 CcmE CYG48_RS03130 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal CYG48_RS03130 PF01578 Cytochrome C assembly protein CYG48_RS03135 PF03918 Cytochrome C biogenesis protein CYG48_RS03140 PF13180 PDZ domain CYG48_RS03145 PF00072 Response regulator receiver domain CYG48_RS03145 PF00486 Transcriptional regulatory protein, C terminal CYG48_RS03150 PF00672 HAMP domain CYG48_RS03150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG48_RS03150 PF00512 His Kinase A (phospho-acceptor) domain CYG48_RS03155 PF03710 Glutamate-ammonia ligase adenylyltransferase CYG48_RS03155 PF08335 GlnD PII-uridylyltransferase CYG48_RS03160 PF00512 His Kinase A (phospho-acceptor) domain CYG48_RS03160 PF00989 PAS fold CYG48_RS03160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG48_RS03165 PF01433 Peptidase family M1 domain CYG48_RS03165 PF17432 Domain of unknown function (DUF3458_C) ARM repeats CYG48_RS03165 PF11940 Domain of unknown function (DUF3458) Ig-like fold CYG48_RS03185 PF00012 Hsp70 protein CYG48_RS03190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG48_RS03190 PF03466 LysR substrate binding domain CYG48_RS03195 PF00905 Penicillin binding protein transpeptidase domain CYG48_RS03215 PF01850 PIN domain CYG48_RS03220 PF09957 Bacterial antitoxin of type II TA system, VapB CYG48_RS03225 PF17969 L,D-transpeptidase C-terminal domain CYG48_RS03225 PF01476 LysM domain CYG48_RS03225 PF03734 L,D-transpeptidase catalytic domain CYG48_RS03235 PF00107 Zinc-binding dehydrogenase CYG48_RS03235 PF08240 Alcohol dehydrogenase GroES-like domain CYG48_RS03240 PF07690 Major Facilitator Superfamily CYG48_RS03245 PF00781 Diacylglycerol kinase catalytic domain CYG48_RS03250 PF00120 Glutamine synthetase, catalytic domain CYG48_RS03255 PF00202 Aminotransferase class-III CYG48_RS03260 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase CYG48_RS03265 PF00535 Glycosyl transferase family 2 CYG48_RS03275 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus CYG48_RS03275 PF01048 Phosphorylase superfamily CYG48_RS03320 PF00155 Aminotransferase class I and II CYG48_RS03330 PF14759 Reductase C-terminal CYG48_RS03330 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYG48_RS03335 PF03328 HpcH/HpaI aldolase/citrate lyase family CYG48_RS03345 PF02530 Porin subfamily CYG48_RS03350 PF02530 Porin subfamily CYG48_RS03360 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain CYG48_RS03360 PF01464 Transglycosylase SLT domain CYG48_RS03365 PF00701 Dihydrodipicolinate synthetase family CYG48_RS03370 PF01668 SmpB protein CYG48_RS03385 PF03706 Lysylphosphatidylglycerol synthase TM region CYG48_RS03395 PF01192 RNA polymerase Rpb6 CYG48_RS03400 PF13291 ACT domain CYG48_RS03400 PF02824 TGS domain CYG48_RS03400 PF04607 Region found in RelA / SpoT proteins CYG48_RS03405 PF13396 Phospholipase_D-nuclease N-terminal CYG48_RS03405 PF13091 PLD-like domain CYG48_RS03410 PF09335 SNARE associated Golgi protein CYG48_RS03420 PF01648 4'-phosphopantetheinyl transferase superfamily CYG48_RS03425 PF10502 Signal peptidase, peptidase S26 CYG48_RS03430 PF14622 Ribonuclease-III-like CYG48_RS03430 PF00035 Double-stranded RNA binding motif CYG48_RS03435 PF01926 50S ribosome-binding GTPase CYG48_RS03435 PF07650 KH domain CYG48_RS03445 PF11967 Recombination protein O N terminal CYG48_RS03445 PF02565 Recombination protein O C terminal CYG48_RS03465 PF01966 HD domain CYG48_RS03475 PF06745 KaiC CYG48_RS03480 PF07689 KaiB domain CYG48_RS03485 PF13426 PAS domain CYG48_RS03485 PF08447 PAS fold CYG48_RS03485 PF07536 HWE histidine kinase CYG48_RS03495 PF00005 ABC transporter CYG48_RS03500 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS03505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CYG48_RS03505 PF00672 HAMP domain CYG48_RS03510 PF01872 RibD C-terminal domain CYG48_RS03515 PF09722 Protein of unknown function (DUF2384) CYG48_RS03525 PF05552 Conserved TM helix CYG48_RS03525 PF00924 Mechanosensitive ion channel CYG48_RS03535 PF01966 HD domain CYG48_RS03540 PF01571 Aminomethyltransferase folate-binding domain CYG48_RS03560 PF00293 NUDIX domain CYG48_RS03575 PF02694 Uncharacterised BCR, YnfA/UPF0060 family CYG48_RS03580 PF02586 SOS response associated peptidase (SRAP) CYG48_RS03585 PF01066 CDP-alcohol phosphatidyltransferase CYG48_RS03590 PF02666 Phosphatidylserine decarboxylase CYG48_RS03595 PF00005 ABC transporter CYG48_RS03600 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS03605 PF00497 Bacterial extracellular solute-binding proteins, family 3 CYG48_RS03610 PF00296 Luciferase-like monooxygenase CYG48_RS03615 PF00005 ABC transporter CYG48_RS03615 PF00664 ABC transporter transmembrane region CYG48_RS03620 PF01476 LysM domain CYG48_RS03625 PF03641 Possible lysine decarboxylase CYG48_RS03630 PF00892 EamA-like transporter family CYG48_RS03635 PF08502 LeuA allosteric (dimerisation) domain CYG48_RS03635 PF00682 HMGL-like CYG48_RS03640 PF00561 alpha/beta hydrolase fold CYG48_RS03660 PF01406 tRNA synthetases class I (C) catalytic domain CYG48_RS03665 PF00106 short chain dehydrogenase CYG48_RS03670 PF13537 Glutamine amidotransferase domain CYG48_RS03670 PF00156 Phosphoribosyl transferase domain CYG48_RS03680 PF18073 Rubredoxin metal binding domain CYG48_RS03680 PF06745 KaiC CYG48_RS03685 PF01168 Alanine racemase, N-terminal domain CYG48_RS03685 PF00842 Alanine racemase, C-terminal domain CYG48_RS03695 PF03796 DnaB-like helicase C terminal domain CYG48_RS03695 PF00772 DnaB-like helicase N terminal domain CYG48_RS03700 PF01281 Ribosomal protein L9, N-terminal domain CYG48_RS03700 PF03948 Ribosomal protein L9, C-terminal domain CYG48_RS03710 PF01084 Ribosomal protein S18 CYG48_RS03715 PF01250 Ribosomal protein S6 CYG48_RS03730 PF00248 Aldo/keto reductase family CYG48_RS03740 PF00698 Acyl transferase domain CYG48_RS03750 PF00550 Phosphopantetheine attachment site CYG48_RS03755 PF02801 Beta-ketoacyl synthase, C-terminal domain CYG48_RS03755 PF00109 Beta-ketoacyl synthase, N-terminal domain CYG48_RS03760 PF02618 YceG-like family CYG48_RS03765 PF08340 Domain of unknown function (DUF1732) CYG48_RS03765 PF03755 YicC-like family, N-terminal region CYG48_RS03770 PF00625 Guanylate kinase CYG48_RS03780 PF00398 Ribosomal RNA adenine dimethylase CYG48_RS03785 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CYG48_RS03795 PF03968 OstA-like protein CYG48_RS03795 PF04453 LPS transport system D CYG48_RS03810 PF01569 PAP2 superfamily CYG48_RS03815 PF00883 Cytosol aminopeptidase family, catalytic domain CYG48_RS03815 PF02789 Cytosol aminopeptidase family, N-terminal domain CYG48_RS03825 PF00326 Prolyl oligopeptidase family CYG48_RS03825 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CYG48_RS03830 PF01850 PIN domain CYG48_RS03840 PF00005 ABC transporter CYG48_RS03840 PF12848 ABC transporter CYG48_RS03850 PF13417 Glutathione S-transferase, N-terminal domain CYG48_RS03855 PF00334 Nucleoside diphosphate kinase CYG48_RS03875 PF02391 MoaE protein CYG48_RS03885 PF01066 CDP-alcohol phosphatidyltransferase CYG48_RS03890 PF02151 UvrB/uvrC motif CYG48_RS03890 PF01541 GIY-YIG catalytic domain CYG48_RS03890 PF08459 UvrC Helix-hairpin-helix N-terminal CYG48_RS03895 PF13505 Outer membrane protein beta-barrel domain CYG48_RS03905 PF00445 Ribonuclease T2 family CYG48_RS03915 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ CYG48_RS03920 PF00384 Molybdopterin oxidoreductase CYG48_RS03920 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CYG48_RS03920 PF01568 Molydopterin dinucleotide binding domain CYG48_RS03925 PF00293 NUDIX domain CYG48_RS03940 PF00551 Formyl transferase CYG48_RS03945 PF00586 AIR synthase related protein, N-terminal domain CYG48_RS03945 PF02769 AIR synthase related protein, C-terminal domain CYG48_RS03950 PF01594 AI-2E family transporter CYG48_RS03960 PF13089 Polyphosphate kinase N-terminal domain CYG48_RS03960 PF02503 Polyphosphate kinase middle domain CYG48_RS03960 PF17941 Polyphosphate kinase C-terminal domain 1 CYG48_RS03960 PF13090 Polyphosphate kinase C-terminal domain 2 CYG48_RS03975 PF00570 HRDC domain CYG48_RS03975 PF01612 3'-5' exonuclease CYG48_RS03985 PF01336 OB-fold nucleic acid binding domain CYG48_RS03985 PF02938 GAD domain CYG48_RS03985 PF00152 tRNA synthetases class II (D, K and N) CYG48_RS03995 PF00067 Cytochrome P450 CYG48_RS04005 PF00916 Sulfate permease family CYG48_RS04005 PF01740 STAS domain CYG48_RS04015 PF03989 DNA gyrase C-terminal domain, beta-propeller CYG48_RS04015 PF00521 DNA gyrase/topoisomerase IV, subunit A CYG48_RS04020 PF02661 Fic/DOC family CYG48_RS04025 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CYG48_RS04030 PF04377 Arginine-tRNA-protein transferase, C terminus CYG48_RS04030 PF04376 Arginine-tRNA-protein transferase, N terminus CYG48_RS04040 PF00490 Delta-aminolevulinic acid dehydratase CYG48_RS04065 PF00464 Serine hydroxymethyltransferase CYG48_RS04070 PF03477 ATP cone domain CYG48_RS04075 PF01872 RibD C-terminal domain CYG48_RS04075 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CYG48_RS04080 PF00677 Lumazine binding domain CYG48_RS04085 PF00885 6,7-dimethyl-8-ribityllumazine synthase CYG48_RS04090 PF01029 NusB family CYG48_RS04095 PF07690 Major Facilitator Superfamily CYG48_RS04100 PF03030 Inorganic H+ pyrophosphatase CYG48_RS04120 PF02504 Fatty acid synthesis protein CYG48_RS04125 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CYG48_RS04125 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CYG48_RS04130 PF00216 Bacterial DNA-binding protein CYG48_RS04135 PF13411 MerR HTH family regulatory protein CYG48_RS04145 PF07886 BA14K-like protein CYG48_RS04150 PF02540 NAD synthase CYG48_RS04155 PF00512 His Kinase A (phospho-acceptor) domain CYG48_RS04155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG48_RS04155 PF00072 Response regulator receiver domain CYG48_RS04155 PF13188 PAS domain CYG48_RS04155 PF08448 PAS fold CYG48_RS04190 PF02397 Bacterial sugar transferase CYG48_RS04195 PF13439 Glycosyltransferase Family 4 CYG48_RS04195 PF00534 Glycosyl transferases group 1 CYG48_RS04220 PF02628 Cytochrome oxidase assembly protein CYG48_RS04230 PF01118 Semialdehyde dehydrogenase, NAD binding domain CYG48_RS04235 PF00491 Arginase family CYG48_RS04240 PF00380 Ribosomal protein S9/S16 CYG48_RS04245 PF00572 Ribosomal protein L13 CYG48_RS04255 PF13380 CoA binding domain CYG48_RS04260 PF01053 Cys/Met metabolism PLP-dependent enzyme CYG48_RS04280 PF00067 Cytochrome P450 CYG48_RS04290 PF17151 Periplasmic sensor domain CYG48_RS04290 PF00990 Diguanylate cyclase, GGDEF domain CYG48_RS04295 PF00574 Clp protease CYG48_RS04300 PF06689 ClpX C4-type zinc finger CYG48_RS04300 PF10431 C-terminal, D2-small domain, of ClpB protein CYG48_RS04300 PF07724 AAA domain (Cdc48 subfamily) CYG48_RS04305 PF00004 ATPase family associated with various cellular activities (AAA) CYG48_RS04305 PF05362 Lon protease (S16) C-terminal proteolytic domain CYG48_RS04305 PF02190 ATP-dependent protease La (LON) substrate-binding domain CYG48_RS04310 PF00216 Bacterial DNA-binding protein CYG48_RS04315 PF00248 Aldo/keto reductase family CYG48_RS04320 PF00149 Calcineurin-like phosphoesterase CYG48_RS04325 PF13514 AAA domain CYG48_RS04340 PF02801 Beta-ketoacyl synthase, C-terminal domain CYG48_RS04340 PF16197 Ketoacyl-synthetase C-terminal extension CYG48_RS04340 PF00698 Acyl transferase domain CYG48_RS04340 PF14765 Polyketide synthase dehydratase CYG48_RS04340 PF08240 Alcohol dehydrogenase GroES-like domain CYG48_RS04340 PF00550 Phosphopantetheine attachment site CYG48_RS04340 PF00109 Beta-ketoacyl synthase, N-terminal domain CYG48_RS04340 PF08659 KR domain CYG48_RS04345 PF00155 Aminotransferase class I and II CYG48_RS04355 PF00149 Calcineurin-like phosphoesterase CYG48_RS04360 PF13807 G-rich domain on putative tyrosine kinase CYG48_RS04360 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CYG48_RS04360 PF02706 Chain length determinant protein CYG48_RS04365 PF16363 GDP-mannose 4,6 dehydratase CYG48_RS04370 PF01370 NAD dependent epimerase/dehydratase family CYG48_RS04375 PF00534 Glycosyl transferases group 1 CYG48_RS04375 PF13579 Glycosyl transferase 4-like domain CYG48_RS04395 PF00534 Glycosyl transferases group 1 CYG48_RS04395 PF13439 Glycosyltransferase Family 4 CYG48_RS04430 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CYG48_RS04435 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CYG48_RS04440 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CYG48_RS04445 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CYG48_RS04460 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CYG48_RS04460 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CYG48_RS04460 PF10531 SLBB domain CYG48_RS04465 PF00829 Ribosomal prokaryotic L21 protein CYG48_RS04470 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CYG48_RS04470 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal CYG48_RS04470 PF00384 Molybdopterin oxidoreductase CYG48_RS04475 PF00146 NADH dehydrogenase CYG48_RS04480 PF12838 4Fe-4S dicluster domain CYG48_RS04485 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CYG48_RS04490 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CYG48_RS04495 PF00361 Proton-conducting membrane transporter CYG48_RS04495 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CYG48_RS04500 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus CYG48_RS04500 PF00361 Proton-conducting membrane transporter CYG48_RS04505 PF00361 Proton-conducting membrane transporter CYG48_RS04510 PF03309 Type III pantothenate kinase CYG48_RS04510 PF03099 Biotin/lipoate A/B protein ligase family CYG48_RS04510 PF02237 Biotin protein ligase C terminal domain CYG48_RS04515 PF12706 Beta-lactamase superfamily domain CYG48_RS04515 PF17770 Ribonuclease J C-terminal domain CYG48_RS04515 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CYG48_RS04530 PF03129 Anticodon binding domain CYG48_RS04530 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CYG48_RS04535 PF02687 FtsX-like permease family CYG48_RS04535 PF12704 MacB-like periplasmic core domain CYG48_RS04540 PF00005 ABC transporter CYG48_RS04550 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CYG48_RS04550 PF14579 Helix-hairpin-helix motif CYG48_RS04550 PF07733 Bacterial DNA polymerase III alpha NTPase domain CYG48_RS04550 PF02811 PHP domain CYG48_RS04560 PF11799 impB/mucB/samB family C-terminal domain CYG48_RS04560 PF00817 impB/mucB/samB family CYG48_RS04575 PF00072 Response regulator receiver domain CYG48_RS04580 PF00072 Response regulator receiver domain CYG48_RS04580 PF00990 Diguanylate cyclase, GGDEF domain CYG48_RS04590 PF00471 Ribosomal protein L33 CYG48_RS04610 PF17876 Cold shock domain CYG48_RS04610 PF08461 Ribonuclease R winged-helix domain CYG48_RS04610 PF00575 S1 RNA binding domain CYG48_RS04610 PF08206 Ribonuclease B OB domain CYG48_RS04610 PF00773 RNB domain CYG48_RS04615 PF01751 Toprim domain CYG48_RS04615 PF01396 Topoisomerase DNA binding C4 zinc finger CYG48_RS04615 PF13368 Topoisomerase C-terminal repeat CYG48_RS04615 PF01131 DNA topoisomerase CYG48_RS04625 PF17782 DprA winged helix domain CYG48_RS04625 PF02481 DNA recombination-mediator protein A CYG48_RS04630 PF02660 Glycerol-3-phosphate acyltransferase CYG48_RS04635 PF01979 Amidohydrolase family CYG48_RS04640 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CYG48_RS04640 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CYG48_RS04645 PF18158 Adaptive response protein AidB N-terminal domain CYG48_RS04645 PF02770 Acyl-CoA dehydrogenase, middle domain CYG48_RS04645 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CYG48_RS04665 PF03652 Holliday junction resolvase CYG48_RS04675 PF02686 Glu-tRNAGln amidotransferase C subunit CYG48_RS04680 PF01425 Amidase CYG48_RS04695 PF09857 Putative toxin of bacterial toxin-antitoxin pair CYG48_RS04705 PF02637 GatB domain CYG48_RS04705 PF02934 GatB/GatE catalytic domain CYG48_RS04725 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CYG48_RS04730 PF00289 Biotin carboxylase, N-terminal domain CYG48_RS04730 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CYG48_RS04730 PF02785 Biotin carboxylase C-terminal domain CYG48_RS04735 PF00364 Biotin-requiring enzyme CYG48_RS04740 PF01220 Dehydroquinase class II CYG48_RS04750 PF00575 S1 RNA binding domain CYG48_RS04750 PF10150 Ribonuclease E/G family CYG48_RS04750 PF12111 Polyribonucleotide phosphorylase C terminal CYG48_RS04755 PF01520 N-acetylmuramoyl-L-alanine amidase CYG48_RS04755 PF11741 AMIN domain CYG48_RS04760 PF17092 Penicillin-binding protein OB-like domain CYG48_RS04760 PF00912 Transglycosylase CYG48_RS04760 PF00905 Penicillin binding protein transpeptidase domain CYG48_RS04770 PF01513 ATP-NAD kinase CYG48_RS04915 PF01555 DNA methylase CYG48_RS04920 PF03796 DnaB-like helicase C terminal domain CYG48_RS04920 PF00772 DnaB-like helicase N terminal domain CYG48_RS04935 PF00308 Bacterial dnaA protein CYG48_RS04935 PF08299 Bacterial dnaA protein helix-turn-helix CYG48_RS04935 PF11638 DnaA N-terminal domain CYG48_RS05080 PF00535 Glycosyl transferase family 2 CYG48_RS05090 PF00182 Chitinase class I CYG48_RS05120 PF00565 Staphylococcal nuclease homologue CYG48_RS05120 PF05901 Excalibur calcium-binding domain CYG48_RS05145 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CYG48_RS05145 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CYG48_RS05145 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CYG48_RS05150 PF00459 Inositol monophosphatase family CYG48_RS05155 PF00588 SpoU rRNA Methylase family CYG48_RS05155 PF08032 RNA 2'-O ribose methyltransferase substrate binding CYG48_RS05170 PF03143 Elongation factor Tu C-terminal domain CYG48_RS05170 PF03144 Elongation factor Tu domain 2 CYG48_RS05170 PF00009 Elongation factor Tu GTP binding domain CYG48_RS05175 PF05159 Capsule polysaccharide biosynthesis protein CYG48_RS05180 PF05159 Capsule polysaccharide biosynthesis protein CYG48_RS05190 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CYG48_RS05195 PF02357 Transcription termination factor nusG CYG48_RS05195 PF00467 KOW motif CYG48_RS05200 PF03946 Ribosomal protein L11, N-terminal domain CYG48_RS05200 PF00298 Ribosomal protein L11, RNA binding domain CYG48_RS05205 PF00687 Ribosomal protein L1p/L10e family CYG48_RS05210 PF00466 Ribosomal protein L10 CYG48_RS05215 PF16320 Ribosomal protein L7/L12 dimerisation domain CYG48_RS05215 PF00542 Ribosomal protein L7/L12 C-terminal domain CYG48_RS05220 PF04560 RNA polymerase Rpb2, domain 7 CYG48_RS05220 PF00562 RNA polymerase Rpb2, domain 6 CYG48_RS05220 PF04563 RNA polymerase beta subunit CYG48_RS05220 PF04565 RNA polymerase Rpb2, domain 3 CYG48_RS05220 PF10385 RNA polymerase beta subunit external 1 domain CYG48_RS05220 PF04561 RNA polymerase Rpb2, domain 2 CYG48_RS05225 PF04983 RNA polymerase Rpb1, domain 3 CYG48_RS05225 PF05000 RNA polymerase Rpb1, domain 4 CYG48_RS05225 PF04998 RNA polymerase Rpb1, domain 5 CYG48_RS05225 PF04997 RNA polymerase Rpb1, domain 1 CYG48_RS05225 PF00623 RNA polymerase Rpb1, domain 2 CYG48_RS05235 PF00164 Ribosomal protein S12/S23 CYG48_RS05240 PF00177 Ribosomal protein S7p/S5e CYG48_RS05245 PF00679 Elongation factor G C-terminus CYG48_RS05245 PF00009 Elongation factor Tu GTP binding domain CYG48_RS05245 PF03144 Elongation factor Tu domain 2 CYG48_RS05245 PF14492 Elongation Factor G, domain II CYG48_RS05245 PF03764 Elongation factor G, domain IV CYG48_RS05250 PF03143 Elongation factor Tu C-terminal domain CYG48_RS05250 PF03144 Elongation factor Tu domain 2 CYG48_RS05250 PF00009 Elongation factor Tu GTP binding domain CYG48_RS05255 PF00338 Ribosomal protein S10p/S20e CYG48_RS05260 PF00297 Ribosomal protein L3 CYG48_RS05265 PF00573 Ribosomal protein L4/L1 family CYG48_RS05270 PF00276 Ribosomal protein L23 CYG48_RS05275 PF03947 Ribosomal Proteins L2, C-terminal domain CYG48_RS05275 PF00181 Ribosomal Proteins L2, RNA binding domain CYG48_RS05280 PF00203 Ribosomal protein S19 CYG48_RS05285 PF00237 Ribosomal protein L22p/L17e CYG48_RS05290 PF07650 KH domain CYG48_RS05290 PF00189 Ribosomal protein S3, C-terminal domain CYG48_RS05295 PF00252 Ribosomal protein L16p/L10e CYG48_RS05300 PF00831 Ribosomal L29 protein CYG48_RS05305 PF00366 Ribosomal protein S17 CYG48_RS05310 PF00238 Ribosomal protein L14p/L23e CYG48_RS05315 PF00467 KOW motif CYG48_RS05315 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CYG48_RS05320 PF00673 ribosomal L5P family C-terminus CYG48_RS05320 PF00281 Ribosomal protein L5 CYG48_RS05325 PF00253 Ribosomal protein S14p/S29e CYG48_RS05330 PF00410 Ribosomal protein S8 CYG48_RS05335 PF00347 Ribosomal protein L6 CYG48_RS05340 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CYG48_RS05345 PF03719 Ribosomal protein S5, C-terminal domain CYG48_RS05345 PF00333 Ribosomal protein S5, N-terminal domain CYG48_RS05350 PF00327 Ribosomal protein L30p/L7e CYG48_RS05355 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CYG48_RS05360 PF00344 SecY translocase CYG48_RS05365 PF05191 Adenylate kinase, active site lid CYG48_RS05370 PF00416 Ribosomal protein S13/S18 CYG48_RS05375 PF00411 Ribosomal protein S11 CYG48_RS05380 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CYG48_RS05380 PF01000 RNA polymerase Rpb3/RpoA insert domain CYG48_RS05380 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CYG48_RS05385 PF01196 Ribosomal protein L17 CYG48_RS05390 PF01794 Ferric reductase like transmembrane component CYG48_RS05395 PF00174 Oxidoreductase molybdopterin binding domain CYG48_RS05405 PF00920 Dehydratase family CYG48_RS05415 PF00595 PDZ domain CYG48_RS05420 PF00004 ATPase family associated with various cellular activities (AAA) CYG48_RS05420 PF16193 AAA C-terminal domain CYG48_RS05420 PF12002 MgsA AAA+ ATPase C terminal CYG48_RS05435 PF00091 Tubulin/FtsZ family, GTPase domain CYG48_RS05435 PF12327 FtsZ family, C-terminal domain CYG48_RS05465 PF02867 Ribonucleotide reductase, barrel domain CYG48_RS05465 PF08471 Class II vitamin B12-dependent ribonucleotide reductase CYG48_RS05470 PF00156 Phosphoribosyl transferase domain CYG48_RS05480 PF02464 Competence-damaged protein CYG48_RS05480 PF18146 Damage-inducible protein CinA KH domain CYG48_RS05480 PF00994 Probable molybdopterin binding domain CYG48_RS05485 PF03358 NADPH-dependent FMN reductase CYG48_RS05500 PF02796 Helix-turn-helix domain of resolvase CYG48_RS05500 PF00239 Resolvase, N terminal domain CYG48_RS05520 PF01695 IstB-like ATP binding protein CYG48_RS05525 PF00665 Integrase core domain CYG48_RS05555 PF04679 ATP dependent DNA ligase C terminal region CYG48_RS05555 PF13298 DNA polymerase Ligase (LigD) CYG48_RS05555 PF01068 ATP dependent DNA ligase domain CYG48_RS05560 PF08448 PAS fold CYG48_RS05560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG48_RS05560 PF13426 PAS domain CYG48_RS05560 PF00512 His Kinase A (phospho-acceptor) domain CYG48_RS05560 PF00072 Response regulator receiver domain CYG48_RS05565 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CYG48_RS05590 PF00149 Calcineurin-like phosphoesterase CYG48_RS05595 PF02386 Cation transport protein CYG48_RS05600 PF00585 C-terminal regulatory domain of Threonine dehydratase CYG48_RS05600 PF00291 Pyridoxal-phosphate dependent enzyme CYG48_RS05615 PF00072 Response regulator receiver domain CYG48_RS05615 PF00990 Diguanylate cyclase, GGDEF domain CYG48_RS05620 PF02525 Flavodoxin-like fold CYG48_RS05625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG48_RS05625 PF03466 LysR substrate binding domain CYG48_RS05635 PF00149 Calcineurin-like phosphoesterase CYG48_RS05635 PF02872 5'-nucleotidase, C-terminal domain CYG48_RS05650 PF01037 Lrp/AsnC ligand binding domain CYG48_RS05655 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CYG48_RS05655 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CYG48_RS05660 PF03551 Transcriptional regulator PadR-like family CYG48_RS05680 PF00581 Rhodanese-like domain CYG48_RS05685 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CYG48_RS05685 PF01411 tRNA synthetases class II (A) CYG48_RS05685 PF02272 DHHA1 domain CYG48_RS05690 PF00571 CBS domain CYG48_RS05690 PF00291 Pyridoxal-phosphate dependent enzyme CYG48_RS05695 PF12973 ChrR Cupin-like domain CYG48_RS05705 PF01384 Phosphate transporter family CYG48_RS05710 PF01865 Protein of unknown function DUF47 CYG48_RS05720 PF07995 Glucose / Sorbosone dehydrogenase CYG48_RS05740 PF08281 Sigma-70, region 4 CYG48_RS05740 PF04542 Sigma-70 region 2 CYG48_RS05750 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CYG48_RS05750 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CYG48_RS05755 PF00107 Zinc-binding dehydrogenase CYG48_RS05755 PF08240 Alcohol dehydrogenase GroES-like domain CYG48_RS05760 PF01370 NAD dependent epimerase/dehydratase family CYG48_RS05765 PF16363 GDP-mannose 4,6 dehydratase CYG48_RS05770 PF13439 Glycosyltransferase Family 4 CYG48_RS05770 PF00534 Glycosyl transferases group 1 CYG48_RS05790 PF01370 NAD dependent epimerase/dehydratase family CYG48_RS05800 PF00106 short chain dehydrogenase CYG48_RS05805 PF00857 Isochorismatase family CYG48_RS05815 PF00107 Zinc-binding dehydrogenase CYG48_RS05815 PF13823 Alcohol dehydrogenase GroES-associated CYG48_RS05815 PF08240 Alcohol dehydrogenase GroES-like domain CYG48_RS05820 PF14659 Phage integrase, N-terminal SAM-like domain CYG48_RS05820 PF13356 Arm DNA-binding domain CYG48_RS05820 PF00589 Phage integrase family CYG48_RS05840 PF13276 HTH-like domain CYG48_RS05840 PF13333 Integrase core domain CYG48_RS05840 PF00665 Integrase core domain CYG48_RS05845 PF01695 IstB-like ATP binding protein CYG48_RS05850 PF00665 Integrase core domain CYG48_RS05925 PF06055 Exopolysaccharide synthesis, ExoD CYG48_RS05965 PF10458 Valyl tRNA synthetase tRNA binding arm CYG48_RS05965 PF00133 tRNA synthetases class I (I, L, M and V) CYG48_RS05965 PF08264 Anticodon-binding domain of tRNA CYG48_RS05975 PF08238 Sel1 repeat CYG48_RS05985 PF01521 Iron-sulphur cluster biosynthesis CYG48_RS05990 PF13286 Phosphohydrolase-associated domain CYG48_RS05990 PF01966 HD domain CYG48_RS05995 PF00750 tRNA synthetases class I (R) CYG48_RS05995 PF03485 Arginyl tRNA synthetase N terminal domain CYG48_RS05995 PF05746 DALR anticodon binding domain CYG48_RS06005 PF00933 Glycosyl hydrolase family 3 N terminal domain CYG48_RS06010 PF02616 Segregation and condensation protein ScpA CYG48_RS06015 PF04079 Segregation and condensation complex subunit ScpB CYG48_RS06020 PF02416 mttA/Hcf106 family CYG48_RS06025 PF02416 mttA/Hcf106 family CYG48_RS06030 PF00902 Sec-independent protein translocase protein (TatC) CYG48_RS06035 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CYG48_RS06035 PF02403 Seryl-tRNA synthetase N-terminal domain CYG48_RS06040 PF01975 Survival protein SurE CYG48_RS06050 PF06725 3D domain CYG48_RS06050 PF01476 LysM domain CYG48_RS06060 PF02699 Preprotein translocase subunit CYG48_RS06080 PF01134 Glucose inhibited division protein A CYG48_RS06100 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CYG48_RS06100 PF05697 Bacterial trigger factor protein (TF) CYG48_RS06100 PF05698 Bacterial trigger factor protein (TF) C-terminus CYG48_RS06105 PF00005 ABC transporter CYG48_RS06105 PF12848 ABC transporter CYG48_RS06125 PF00180 Isocitrate/isopropylmalate dehydrogenase CYG48_RS06140 PF01177 Asp/Glu/Hydantoin racemase CYG48_RS06145 PF01810 LysE type translocator CYG48_RS06155 PF00163 Ribosomal protein S4/S9 N-terminal domain CYG48_RS06155 PF01479 S4 domain CYG48_RS06160 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYG48_RS06160 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CYG48_RS06165 PF04002 RadC-like JAB domain CYG48_RS06170 PF00557 Metallopeptidase family M24 CYG48_RS06175 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus CYG48_RS06185 PF00155 Aminotransferase class I and II CYG48_RS06190 PF00742 Homoserine dehydrogenase CYG48_RS06190 PF01842 ACT domain CYG48_RS06190 PF03447 Homoserine dehydrogenase, NAD binding domain CYG48_RS06195 PF10141 Single-strand DNA-specific exonuclease, C terminal domain CYG48_RS06195 PF01368 DHH family CYG48_RS06195 PF02272 DHHA1 domain CYG48_RS06195 PF17768 RecJ OB domain CYG48_RS06215 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CYG48_RS06220 PF00313 'Cold-shock' DNA-binding domain CYG48_RS06250 PF00005 ABC transporter CYG48_RS06255 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS06260 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS06265 PF00497 Bacterial extracellular solute-binding proteins, family 3 CYG48_RS06270 PF01053 Cys/Met metabolism PLP-dependent enzyme CYG48_RS06275 PF01494 FAD binding domain CYG48_RS06285 PF00561 alpha/beta hydrolase fold CYG48_RS06290 PF06426 Serine acetyltransferase, N-terminal CYG48_RS06290 PF00132 Bacterial transferase hexapeptide (six repeats) CYG48_RS06305 PF02617 ATP-dependent Clp protease adaptor protein ClpS CYG48_RS06310 PF07724 AAA domain (Cdc48 subfamily) CYG48_RS06310 PF17871 AAA lid domain CYG48_RS06310 PF00004 ATPase family associated with various cellular activities (AAA) CYG48_RS06310 PF02861 Clp amino terminal domain, pathogenicity island component CYG48_RS06310 PF10431 C-terminal, D2-small domain, of ClpB protein CYG48_RS06330 PF01230 HIT domain CYG48_RS06355 PF01810 LysE type translocator CYG48_RS06365 PF00318 Ribosomal protein S2 CYG48_RS06370 PF00889 Elongation factor TS CYG48_RS06375 PF00696 Amino acid kinase family CYG48_RS06380 PF01765 Ribosome recycling factor CYG48_RS06385 PF01255 Putative undecaprenyl diphosphate synthase CYG48_RS06395 PF17820 PDZ domain CYG48_RS06395 PF02163 Peptidase family M50 CYG48_RS06400 PF07244 Surface antigen variable number repeat CYG48_RS06400 PF01103 Surface antigen CYG48_RS06405 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CYG48_RS06405 PF00132 Bacterial transferase hexapeptide (six repeats) CYG48_RS06410 PF07977 FabA-like domain CYG48_RS06415 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CYG48_RS06415 PF00132 Bacterial transferase hexapeptide (six repeats) CYG48_RS06420 PF17930 LpxI N-terminal domain CYG48_RS06420 PF06230 LpxI C-terminal domain CYG48_RS06425 PF02684 Lipid-A-disaccharide synthetase CYG48_RS06440 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CYG48_RS06440 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CYG48_RS06445 PF00155 Aminotransferase class I and II CYG48_RS06455 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS06460 PF00005 ABC transporter CYG48_RS06460 PF17912 MalK OB fold domain CYG48_RS06475 PF02567 Phenazine biosynthesis-like protein CYG48_RS06485 PF07886 BA14K-like protein CYG48_RS06495 PF13419 Haloacid dehalogenase-like hydrolase CYG48_RS06500 PF13520 Amino acid permease CYG48_RS06505 PF09335 SNARE associated Golgi protein CYG48_RS06510 PF02355 Protein export membrane protein CYG48_RS06510 PF07549 SecD/SecF GG Motif CYG48_RS06520 PF03741 Integral membrane protein TerC family CYG48_RS06535 PF03928 Haem-degrading CYG48_RS06550 PF00924 Mechanosensitive ion channel CYG48_RS06550 PF12795 Mechanosensitive ion channel porin domain CYG48_RS06550 PF12794 Mechanosensitive ion channel inner membrane domain 1 CYG48_RS06555 PF08669 Glycine cleavage T-protein C-terminal barrel domain CYG48_RS06555 PF01571 Aminomethyltransferase folate-binding domain CYG48_RS06555 PF16350 FAD dependent oxidoreductase central domain CYG48_RS06555 PF01266 FAD dependent oxidoreductase CYG48_RS06560 PF00072 Response regulator receiver domain CYG48_RS06565 PF00990 Diguanylate cyclase, GGDEF domain CYG48_RS06580 PF02654 Cobalamin-5-phosphate synthase CYG48_RS06585 PF02277 Phosphoribosyltransferase CYG48_RS06595 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CYG48_RS06600 PF01925 Sulfite exporter TauE/SafE CYG48_RS06605 PF01156 Inosine-uridine preferring nucleoside hydrolase CYG48_RS06610 PF00550 Phosphopantetheine attachment site CYG48_RS06615 PF07977 FabA-like domain CYG48_RS06625 PF00109 Beta-ketoacyl synthase, N-terminal domain CYG48_RS06625 PF02801 Beta-ketoacyl synthase, C-terminal domain CYG48_RS06630 PF00107 Zinc-binding dehydrogenase CYG48_RS06630 PF08240 Alcohol dehydrogenase GroES-like domain CYG48_RS06650 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CYG48_RS06650 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CYG48_RS06655 PF00248 Aldo/keto reductase family CYG48_RS06660 PF04616 Glycosyl hydrolases family 43 CYG48_RS06660 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain CYG48_RS06670 PF01297 Zinc-uptake complex component A periplasmic CYG48_RS06675 PF00005 ABC transporter CYG48_RS06680 PF00950 ABC 3 transport family CYG48_RS06685 PF01475 Ferric uptake regulator family CYG48_RS06690 PF00132 Bacterial transferase hexapeptide (six repeats) CYG48_RS06695 PF01557 Fumarylacetoacetate (FAA) hydrolase family CYG48_RS06700 PF01207 Dihydrouridine synthase (Dus) CYG48_RS06705 PF00154 recA bacterial DNA recombination protein CYG48_RS06710 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CYG48_RS06710 PF02272 DHHA1 domain CYG48_RS06710 PF01411 tRNA synthetases class II (A) CYG48_RS06715 PF01171 PP-loop family CYG48_RS06720 PF00459 Inositol monophosphatase family CYG48_RS06725 PF07690 Major Facilitator Superfamily CYG48_RS06730 PF00462 Glutaredoxin CYG48_RS06745 PF00586 AIR synthase related protein, N-terminal domain CYG48_RS06745 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CYG48_RS06745 PF02769 AIR synthase related protein, C-terminal domain CYG48_RS06765 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase CYG48_RS06770 PF01259 SAICAR synthetase CYG48_RS06785 PF00206 Lyase CYG48_RS06785 PF10397 Adenylosuccinate lyase C-terminus CYG48_RS06795 PF00834 Ribulose-phosphate 3 epimerase family CYG48_RS06805 PF00004 ATPase family associated with various cellular activities (AAA) CYG48_RS06805 PF02190 ATP-dependent protease La (LON) substrate-binding domain CYG48_RS06805 PF05362 Lon protease (S16) C-terminal proteolytic domain CYG48_RS06820 PF02625 XdhC and CoxI family CYG48_RS06820 PF13478 XdhC Rossmann domain CYG48_RS06825 PF12804 MobA-like NTP transferase domain CYG48_RS06835 PF00293 NUDIX domain CYG48_RS06835 PF03099 Biotin/lipoate A/B protein ligase family CYG48_RS06840 PF00270 DEAD/DEAH box helicase CYG48_RS06840 PF00271 Helicase conserved C-terminal domain CYG48_RS06845 PF01476 LysM domain CYG48_RS06845 PF08525 Opacity-associated protein A N-terminal motif CYG48_RS06845 PF01551 Peptidase family M23 CYG48_RS06850 PF04305 Protein of unknown function (DUF455) CYG48_RS06855 PF00578 AhpC/TSA family CYG48_RS06865 PF00579 tRNA synthetases class I (W and Y) CYG48_RS06870 PF17151 Periplasmic sensor domain CYG48_RS06870 PF00990 Diguanylate cyclase, GGDEF domain CYG48_RS06875 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CYG48_RS06880 PF00266 Aminotransferase class-V CYG48_RS06885 PF01458 Uncharacterized protein family (UPF0051) CYG48_RS06890 PF00005 ABC transporter CYG48_RS06895 PF01458 Uncharacterized protein family (UPF0051) CYG48_RS06900 PF00266 Aminotransferase class-V CYG48_RS06905 PF01883 Iron-sulfur cluster assembly protein CYG48_RS06910 PF01521 Iron-sulphur cluster biosynthesis CYG48_RS06915 PF00005 ABC transporter CYG48_RS06915 PF02687 FtsX-like permease family CYG48_RS06915 PF12704 MacB-like periplasmic core domain CYG48_RS06920 PF12704 MacB-like periplasmic core domain CYG48_RS06920 PF02687 FtsX-like permease family CYG48_RS06920 PF00005 ABC transporter CYG48_RS06925 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CYG48_RS06955 PF02683 Cytochrome C biogenesis protein transmembrane region CYG48_RS06960 PF03547 Membrane transport protein CYG48_RS06965 PF01494 FAD binding domain CYG48_RS06975 PF00005 ABC transporter CYG48_RS06980 PF02653 Branched-chain amino acid transport system / permease component CYG48_RS06985 PF02653 Branched-chain amino acid transport system / permease component CYG48_RS06990 PF02608 ABC transporter substrate-binding protein PnrA-like CYG48_RS06995 PF00132 Bacterial transferase hexapeptide (six repeats) CYG48_RS06995 PF14602 Hexapeptide repeat of succinyl-transferase CYG48_RS06995 PF12804 MobA-like NTP transferase domain CYG48_RS07000 PF01380 SIS domain CYG48_RS07010 PF00271 Helicase conserved C-terminal domain CYG48_RS07010 PF17191 RecG wedge domain CYG48_RS07010 PF00270 DEAD/DEAH box helicase CYG48_RS07020 PF00270 DEAD/DEAH box helicase CYG48_RS07020 PF17757 UvrB interaction domain CYG48_RS07020 PF03461 TRCF domain CYG48_RS07020 PF00271 Helicase conserved C-terminal domain CYG48_RS07020 PF02559 CarD-like/TRCF domain CYG48_RS07030 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CYG48_RS07050 PF00120 Glutamine synthetase, catalytic domain CYG48_RS07050 PF03951 Glutamine synthetase, beta-Grasp domain CYG48_RS07055 PF00543 Nitrogen regulatory protein P-II CYG48_RS07060 PF01256 Carbohydrate kinase CYG48_RS07060 PF03853 YjeF-related protein N-terminus CYG48_RS07070 PF17760 UvrA interaction domain CYG48_RS07070 PF17755 UvrA DNA-binding domain CYG48_RS07075 PF00436 Single-strand binding protein family CYG48_RS07080 PF01914 MarC family integral membrane protein CYG48_RS07085 PF03989 DNA gyrase C-terminal domain, beta-propeller CYG48_RS07085 PF00521 DNA gyrase/topoisomerase IV, subunit A CYG48_RS07095 PF01467 Cytidylyltransferase-like CYG48_RS07100 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CYG48_RS07105 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CYG48_RS07110 PF02547 Queuosine biosynthesis protein CYG48_RS07115 PF01702 Queuine tRNA-ribosyltransferase CYG48_RS07125 PF01556 DnaJ C terminal domain CYG48_RS07125 PF00226 DnaJ domain CYG48_RS07125 PF00684 DnaJ central domain CYG48_RS07145 PF12706 Beta-lactamase superfamily domain CYG48_RS07145 PF03099 Biotin/lipoate A/B protein ligase family CYG48_RS07150 PF01026 TatD related DNase CYG48_RS07155 PF09334 tRNA synthetases class I (M) CYG48_RS07155 PF08264 Anticodon-binding domain of tRNA CYG48_RS07160 PF09115 DNA polymerase III, delta subunit, C terminal CYG48_RS07165 PF02223 Thymidylate kinase CYG48_RS07170 PF00768 D-alanyl-D-alanine carboxypeptidase CYG48_RS07170 PF07943 Penicillin-binding protein 5, C-terminal domain CYG48_RS07175 PF05036 Sporulation related domain CYG48_RS07175 PF03330 Lytic transglycolase CYG48_RS07190 PF00211 Adenylate and Guanylate cyclase catalytic domain CYG48_RS07220 PF02885 Glycosyl transferase family, helical bundle domain CYG48_RS07220 PF00591 Glycosyl transferase family, a/b domain CYG48_RS07225 PF00218 Indole-3-glycerol phosphate synthase CYG48_RS07230 PF01967 MoaC family CYG48_RS07235 PF03453 MoeA N-terminal region (domain I and II) CYG48_RS07235 PF03454 MoeA C-terminal region (domain IV) CYG48_RS07235 PF00994 Probable molybdopterin binding domain CYG48_RS07240 PF03441 FAD binding domain of DNA photolyase CYG48_RS07240 PF00875 DNA photolyase CYG48_RS07255 PF00285 Citrate synthase, C-terminal domain CYG48_RS07260 PF01258 Prokaryotic dksA/traR C4-type zinc finger CYG48_RS07265 PF00300 Histidine phosphatase superfamily (branch 1) CYG48_RS07270 PF04317 YcjX-like family, DUF463 CYG48_RS07275 PF05128 Domain of unknown function (DUF697) CYG48_RS07285 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CYG48_RS07290 PF02152 Dihydroneopterin aldolase CYG48_RS07295 PF00809 Pterin binding enzyme CYG48_RS07305 PF00111 2Fe-2S iron-sulfur cluster binding domain CYG48_RS07330 PF00005 ABC transporter CYG48_RS07335 PF02405 Permease MlaE CYG48_RS07340 PF13378 Enolase C-terminal domain-like CYG48_RS07340 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CYG48_RS07350 PF01515 Phosphate acetyl/butaryl transferase CYG48_RS07350 PF03949 Malic enzyme, NAD binding domain CYG48_RS07350 PF00390 Malic enzyme, N-terminal domain CYG48_RS07360 PF07676 WD40-like Beta Propeller Repeat CYG48_RS07365 PF00795 Carbon-nitrogen hydrolase CYG48_RS07365 PF02540 NAD synthase CYG48_RS07370 PF01474 Class-II DAHP synthetase family CYG48_RS07375 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CYG48_RS07375 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYG48_RS07380 PF01638 HxlR-like helix-turn-helix CYG48_RS07390 PF01177 Asp/Glu/Hydantoin racemase CYG48_RS07395 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CYG48_RS07400 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain CYG48_RS07400 PF13538 UvrD-like helicase C-terminal domain CYG48_RS07400 PF14490 Helix-hairpin-helix containing domain CYG48_RS07410 PF02211 Nitrile hydratase beta subunit CYG48_RS07415 PF02979 Nitrile hydratase, alpha chain CYG48_RS07420 PF01810 LysE type translocator CYG48_RS07425 PF00248 Aldo/keto reductase family CYG48_RS07430 PF05159 Capsule polysaccharide biosynthesis protein CYG48_RS07435 PF10369 Small subunit of acetolactate synthase CYG48_RS07440 PF00205 Thiamine pyrophosphate enzyme, central domain CYG48_RS07440 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CYG48_RS07440 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CYG48_RS07460 PF13302 Acetyltransferase (GNAT) domain CYG48_RS07465 PF13180 PDZ domain CYG48_RS07470 PF01145 SPFH domain / Band 7 family CYG48_RS07475 PF01145 SPFH domain / Band 7 family CYG48_RS07480 PF00186 Dihydrofolate reductase CYG48_RS07485 PF00072 Response regulator receiver domain CYG48_RS07485 PF00486 Transcriptional regulatory protein, C terminal CYG48_RS07490 PF00303 Thymidylate synthase CYG48_RS07515 PF02574 Homocysteine S-methyltransferase CYG48_RS07515 PF00809 Pterin binding enzyme CYG48_RS07515 PF02965 Vitamin B12 dependent methionine synthase, activation domain CYG48_RS07515 PF02310 B12 binding domain CYG48_RS07515 PF02607 B12 binding domain CYG48_RS07530 PF06253 Trimethylamine methyltransferase (MTTB) CYG48_RS07535 PF02607 B12 binding domain CYG48_RS07535 PF02310 B12 binding domain CYG48_RS07560 PF02310 B12 binding domain CYG48_RS07560 PF02574 Homocysteine S-methyltransferase CYG48_RS07560 PF02607 B12 binding domain CYG48_RS07560 PF02965 Vitamin B12 dependent methionine synthase, activation domain CYG48_RS07560 PF00809 Pterin binding enzyme CYG48_RS07570 PF03466 LysR substrate binding domain CYG48_RS07570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG48_RS07580 PF12833 Helix-turn-helix domain CYG48_RS07580 PF01965 DJ-1/PfpI family CYG48_RS07585 PF01061 ABC-2 type transporter CYG48_RS07590 PF00005 ABC transporter CYG48_RS07595 PF01925 Sulfite exporter TauE/SafE CYG48_RS07605 PF08269 Cache domain CYG48_RS07605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CYG48_RS07605 PF08269 Cache domain CYG48_RS07605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CYG48_RS07610 PF03061 Thioesterase superfamily CYG48_RS07625 PF00990 Diguanylate cyclase, GGDEF domain CYG48_RS07625 PF03707 Bacterial signalling protein N terminal repeat CYG48_RS07625 PF00563 EAL domain CYG48_RS07630 PF12344 Ultra-violet resistance protein B CYG48_RS07630 PF17757 UvrB interaction domain CYG48_RS07630 PF02151 UvrB/uvrC motif CYG48_RS07630 PF04851 Type III restriction enzyme, res subunit CYG48_RS07630 PF00271 Helicase conserved C-terminal domain CYG48_RS07660 PF08448 PAS fold CYG48_RS07660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG48_RS07660 PF00512 His Kinase A (phospho-acceptor) domain CYG48_RS07660 PF13188 PAS domain CYG48_RS07660 PF00072 Response regulator receiver domain CYG48_RS07670 PF00117 Glutamine amidotransferase class-I CYG48_RS07670 PF06418 CTP synthase N-terminus CYG48_RS07675 PF03840 Preprotein translocase SecG subunit CYG48_RS07680 PF00121 Triosephosphate isomerase CYG48_RS07690 PF01751 Toprim domain CYG48_RS07690 PF00986 DNA gyrase B subunit, carboxyl terminus CYG48_RS07690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG48_RS07690 PF00204 DNA gyrase B CYG48_RS07695 PF01590 GAF domain CYG48_RS07695 PF00360 Phytochrome region CYG48_RS07695 PF08446 PAS fold CYG48_RS07695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG48_RS07695 PF00512 His Kinase A (phospho-acceptor) domain CYG48_RS07700 PF01594 AI-2E family transporter CYG48_RS07710 PF01613 Flavin reductase like domain CYG48_RS07725 PF02824 TGS domain CYG48_RS07725 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CYG48_RS07725 PF03129 Anticodon binding domain CYG48_RS07725 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CYG48_RS07730 PF01809 Putative membrane protein insertion efficiency factor CYG48_RS07740 PF01227 GTP cyclohydrolase I CYG48_RS07745 PF01502 Phosphoribosyl-AMP cyclohydrolase CYG48_RS07750 PF01734 Patatin-like phospholipase CYG48_RS07785 PF07943 Penicillin-binding protein 5, C-terminal domain CYG48_RS07785 PF00768 D-alanyl-D-alanine carboxypeptidase CYG48_RS07800 PF03315 Serine dehydratase beta chain CYG48_RS07800 PF03313 Serine dehydratase alpha chain CYG48_RS07815 PF09278 MerR, DNA binding CYG48_RS07815 PF00376 MerR family regulatory protein CYG48_RS07820 PF01769 Divalent cation transporter CYG48_RS07820 PF03448 MgtE intracellular N domain CYG48_RS07820 PF00571 CBS domain CYG48_RS07825 PF01327 Polypeptide deformylase CYG48_RS07840 PF03099 Biotin/lipoate A/B protein ligase family CYG48_RS07875 PF08240 Alcohol dehydrogenase GroES-like domain CYG48_RS07875 PF00107 Zinc-binding dehydrogenase CYG48_RS07880 PF13673 Acetyltransferase (GNAT) domain CYG48_RS07885 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CYG48_RS07890 PF00756 Putative esterase CYG48_RS07915 PF13419 Haloacid dehalogenase-like hydrolase CYG48_RS07920 PF01479 S4 domain CYG48_RS07920 PF00849 RNA pseudouridylate synthase CYG48_RS07925 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CYG48_RS07940 PF01571 Aminomethyltransferase folate-binding domain CYG48_RS07940 PF08669 Glycine cleavage T-protein C-terminal barrel domain CYG48_RS07945 PF01597 Glycine cleavage H-protein CYG48_RS07950 PF02347 Glycine cleavage system P-protein CYG48_RS07955 PF00175 Oxidoreductase NAD-binding domain CYG48_RS07955 PF00970 Oxidoreductase FAD-binding domain CYG48_RS07975 PF10414 Sirohaem synthase dimerisation region CYG48_RS07975 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CYG48_RS07985 PF03819 MazG nucleotide pyrophosphohydrolase domain CYG48_RS07990 PF16360 GTP-binding GTPase Middle Region CYG48_RS07990 PF13167 GTP-binding GTPase N-terminal CYG48_RS07990 PF01926 50S ribosome-binding GTPase CYG48_RS07995 PF17209 Hfq protein CYG48_RS08000 PF01063 Amino-transferase class IV CYG48_RS08005 PF02080 TrkA-C domain CYG48_RS08005 PF02254 TrkA-N domain CYG48_RS08010 PF00072 Response regulator receiver domain CYG48_RS08010 PF02954 Bacterial regulatory protein, Fis family CYG48_RS08010 PF00158 Sigma-54 interaction domain CYG48_RS08015 PF00672 HAMP domain CYG48_RS08015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG48_RS08015 PF00512 His Kinase A (phospho-acceptor) domain CYG48_RS08015 PF00989 PAS fold CYG48_RS08020 PF02954 Bacterial regulatory protein, Fis family CYG48_RS08020 PF00072 Response regulator receiver domain CYG48_RS08020 PF00158 Sigma-54 interaction domain CYG48_RS08025 PF00512 His Kinase A (phospho-acceptor) domain CYG48_RS08025 PF00989 PAS fold CYG48_RS08025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG48_RS08030 PF01207 Dihydrouridine synthase (Dus) CYG48_RS08035 PF02542 YgbB family CYG48_RS08035 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CYG48_RS08040 PF02464 Competence-damaged protein CYG48_RS08055 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CYG48_RS08055 PF04055 Radical SAM superfamily CYG48_RS08065 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CYG48_RS08065 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYG48_RS08075 PF02817 e3 binding domain CYG48_RS08075 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CYG48_RS08075 PF00364 Biotin-requiring enzyme CYG48_RS08080 PF02779 Transketolase, pyrimidine binding domain CYG48_RS08080 PF02780 Transketolase, C-terminal domain CYG48_RS08080 PF00364 Biotin-requiring enzyme CYG48_RS08085 PF00676 Dehydrogenase E1 component CYG48_RS08095 PF03952 Enolase, N-terminal domain CYG48_RS08095 PF00113 Enolase, C-terminal TIM barrel domain CYG48_RS08100 PF00793 DAHP synthetase I family CYG48_RS08110 PF01726 LexA DNA binding domain CYG48_RS08110 PF00717 Peptidase S24-like CYG48_RS08120 PF00285 Citrate synthase, C-terminal domain CYG48_RS08130 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CYG48_RS08135 PF13419 Haloacid dehalogenase-like hydrolase CYG48_RS08140 PF01471 Putative peptidoglycan binding domain CYG48_RS08140 PF03734 L,D-transpeptidase catalytic domain CYG48_RS08145 PF10415 Fumarase C C-terminus CYG48_RS08145 PF00206 Lyase CYG48_RS08150 PF17158 Membrane-associated sensor, integral membrane domain CYG48_RS08150 PF00990 Diguanylate cyclase, GGDEF domain CYG48_RS08165 PF01047 MarR family CYG48_RS08175 PF04055 Radical SAM superfamily CYG48_RS08175 PF06463 Molybdenum Cofactor Synthesis C CYG48_RS08185 PF07690 Major Facilitator Superfamily CYG48_RS08190 PF12804 MobA-like NTP transferase domain CYG48_RS08195 PF03205 Molybdopterin guanine dinucleotide synthesis protein B CYG48_RS08205 PF00497 Bacterial extracellular solute-binding proteins, family 3 CYG48_RS08210 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS08215 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS08220 PF06233 Usg-like family CYG48_RS08230 PF08241 Methyltransferase domain CYG48_RS08255 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CYG48_RS08255 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CYG48_RS08260 PF01037 Lrp/AsnC ligand binding domain CYG48_RS08260 PF13404 AsnC-type helix-turn-helix domain CYG48_RS08265 PF03167 Uracil DNA glycosylase superfamily CYG48_RS08275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG48_RS08275 PF00512 His Kinase A (phospho-acceptor) domain CYG48_RS08275 PF00989 PAS fold CYG48_RS08285 PF02913 FAD linked oxidases, C-terminal domain CYG48_RS08285 PF01565 FAD binding domain CYG48_RS08290 PF00873 AcrB/AcrD/AcrF family CYG48_RS08295 PF13533 Biotin-lipoyl like CYG48_RS08300 PF00580 UvrD/REP helicase N-terminal domain CYG48_RS08300 PF13361 UvrD-like helicase C-terminal domain CYG48_RS08305 PF07687 Peptidase dimerisation domain CYG48_RS08305 PF01546 Peptidase family M20/M25/M40 CYG48_RS08315 PF00857 Isochorismatase family CYG48_RS08330 PF01321 Creatinase/Prolidase N-terminal domain CYG48_RS08330 PF00557 Metallopeptidase family M24 CYG48_RS08345 PF02630 SCO1/SenC CYG48_RS08350 PF01584 CheW-like domain CYG48_RS08365 PF01653 NAD-dependent DNA ligase adenylation domain CYG48_RS08365 PF03120 NAD-dependent DNA ligase OB-fold domain CYG48_RS08365 PF00533 BRCA1 C Terminus (BRCT) domain CYG48_RS08365 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CYG48_RS08365 PF12826 Helix-hairpin-helix motif CYG48_RS08370 PF02463 RecF/RecN/SMC N terminal domain CYG48_RS08375 PF13525 Outer membrane lipoprotein CYG48_RS08380 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CYG48_RS08385 PF12327 FtsZ family, C-terminal domain CYG48_RS08385 PF00091 Tubulin/FtsZ family, GTPase domain CYG48_RS08390 PF02491 SHS2 domain inserted in FTSA CYG48_RS08395 PF08478 POTRA domain, FtsQ-type CYG48_RS08395 PF03799 Cell division protein FtsQ CYG48_RS08400 PF07478 D-ala D-ala ligase C-terminus CYG48_RS08400 PF01820 D-ala D-ala ligase N-terminus CYG48_RS08405 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CYG48_RS08405 PF01565 FAD binding domain CYG48_RS08410 PF01225 Mur ligase family, catalytic domain CYG48_RS08410 PF02875 Mur ligase family, glutamate ligase domain CYG48_RS08410 PF08245 Mur ligase middle domain CYG48_RS08415 PF03033 Glycosyltransferase family 28 N-terminal domain CYG48_RS08415 PF04101 Glycosyltransferase family 28 C-terminal domain CYG48_RS08420 PF01098 Cell cycle protein CYG48_RS08425 PF08245 Mur ligase middle domain CYG48_RS08425 PF02875 Mur ligase family, glutamate ligase domain CYG48_RS08430 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CYG48_RS08430 PF00953 Glycosyl transferase family 4 CYG48_RS08435 PF02875 Mur ligase family, glutamate ligase domain CYG48_RS08435 PF08245 Mur ligase middle domain CYG48_RS08435 PF01225 Mur ligase family, catalytic domain CYG48_RS08440 PF08245 Mur ligase middle domain CYG48_RS08440 PF02875 Mur ligase family, glutamate ligase domain CYG48_RS08440 PF01225 Mur ligase family, catalytic domain CYG48_RS08445 PF00905 Penicillin binding protein transpeptidase domain CYG48_RS08445 PF03717 Penicillin-binding Protein dimerisation domain CYG48_RS08455 PF01795 MraW methylase family CYG48_RS08460 PF02381 MraZ protein, putative antitoxin-like CYG48_RS08480 PF01510 N-acetylmuramoyl-L-alanine amidase CYG48_RS08485 PF00226 DnaJ domain CYG48_RS08485 PF05099 Tellurite resistance protein TerB CYG48_RS08490 PF00365 Phosphofructokinase CYG48_RS08510 PF01183 Glycosyl hydrolases family 25 CYG48_RS08525 PF02219 Methylenetetrahydrofolate reductase CYG48_RS08530 PF13847 Methyltransferase domain CYG48_RS08530 PF03551 Transcriptional regulator PadR-like family CYG48_RS08535 PF00672 HAMP domain CYG48_RS08535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CYG48_RS08540 PF12848 ABC transporter CYG48_RS08540 PF00005 ABC transporter CYG48_RS08545 PF12146 Serine aminopeptidase, S33 CYG48_RS08550 PF02515 CoA-transferase family III CYG48_RS08555 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CYG48_RS08555 PF00205 Thiamine pyrophosphate enzyme, central domain CYG48_RS08555 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CYG48_RS08560 PF01042 Endoribonuclease L-PSP CYG48_RS08575 PF03734 L,D-transpeptidase catalytic domain CYG48_RS08575 PF01476 LysM domain CYG48_RS08580 PF07015 VirC1 protein CYG48_RS08585 PF00465 Iron-containing alcohol dehydrogenase CYG48_RS08590 PF00171 Aldehyde dehydrogenase family CYG48_RS08595 PF00120 Glutamine synthetase, catalytic domain CYG48_RS08595 PF03951 Glutamine synthetase, beta-Grasp domain CYG48_RS08605 PF01380 SIS domain CYG48_RS08605 PF01418 Helix-turn-helix domain, rpiR family CYG48_RS08625 PF08402 TOBE domain CYG48_RS08625 PF00005 ABC transporter CYG48_RS08630 PF00809 Pterin binding enzyme CYG48_RS08630 PF02965 Vitamin B12 dependent methionine synthase, activation domain CYG48_RS08630 PF02574 Homocysteine S-methyltransferase CYG48_RS08630 PF02310 B12 binding domain CYG48_RS08630 PF02607 B12 binding domain CYG48_RS08640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG48_RS08640 PF13426 PAS domain CYG48_RS08640 PF00072 Response regulator receiver domain CYG48_RS08650 PF01571 Aminomethyltransferase folate-binding domain CYG48_RS08655 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CYG48_RS08660 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS08665 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS08670 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CYG48_RS08670 PF00005 ABC transporter CYG48_RS08675 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CYG48_RS08675 PF00005 ABC transporter CYG48_RS08680 PF00266 Aminotransferase class-V CYG48_RS08685 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CYG48_RS08690 PF02653 Branched-chain amino acid transport system / permease component CYG48_RS08695 PF00005 ABC transporter CYG48_RS08700 PF13407 Periplasmic binding protein domain CYG48_RS08705 PF00920 Dehydratase family CYG48_RS08710 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CYG48_RS08720 PF13407 Periplasmic binding protein domain CYG48_RS08725 PF00005 ABC transporter CYG48_RS08730 PF02653 Branched-chain amino acid transport system / permease component CYG48_RS08735 PF02653 Branched-chain amino acid transport system / permease component CYG48_RS08740 PF07729 FCD domain CYG48_RS08740 PF00392 Bacterial regulatory proteins, gntR family CYG48_RS08755 PF01370 NAD dependent epimerase/dehydratase family CYG48_RS08760 PF07729 FCD domain CYG48_RS08760 PF00392 Bacterial regulatory proteins, gntR family CYG48_RS08765 PF00701 Dihydrodipicolinate synthetase family CYG48_RS08770 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CYG48_RS08770 PF13378 Enolase C-terminal domain-like CYG48_RS08775 PF04909 Amidohydrolase CYG48_RS08780 PF03480 Bacterial extracellular solute-binding protein, family 7 CYG48_RS08790 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CYG48_RS08795 PF00171 Aldehyde dehydrogenase family CYG48_RS08800 PF01625 Peptide methionine sulfoxide reductase CYG48_RS08805 PF05035 2-keto-3-deoxy-galactonokinase CYG48_RS08810 PF01081 KDPG and KHG aldolase CYG48_RS08815 PF13847 Methyltransferase domain CYG48_RS08820 PF01418 Helix-turn-helix domain, rpiR family CYG48_RS08820 PF01380 SIS domain CYG48_RS08825 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CYG48_RS08830 PF01869 BadF/BadG/BcrA/BcrD ATPase family CYG48_RS08835 PF13580 SIS domain CYG48_RS08840 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CYG48_RS08845 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS08850 PF12911 N-terminal TM domain of oligopeptide transport permease C CYG48_RS08850 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS08855 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CYG48_RS08855 PF00005 ABC transporter CYG48_RS08860 PF00144 Beta-lactamase CYG48_RS08865 PF03702 Anhydro-N-acetylmuramic acid kinase CYG48_RS08870 PF00892 EamA-like transporter family CYG48_RS08875 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS08880 PF00005 ABC transporter CYG48_RS08885 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS08890 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CYG48_RS08920 PF01695 IstB-like ATP binding protein CYG48_RS08925 PF00665 Integrase core domain CYG48_RS08965 PF03869 Arc-like DNA binding domain CYG48_RS08970 PF03869 Arc-like DNA binding domain CYG48_RS09005 PF04402 Protein of unknown function (DUF541) CYG48_RS09015 PF01894 Uncharacterised protein family UPF0047 CYG48_RS09025 PF03851 UV-endonuclease UvdE CYG48_RS09040 PF00893 Small Multidrug Resistance protein CYG48_RS09045 PF04546 Sigma-70, non-essential region CYG48_RS09045 PF04539 Sigma-70 region 3 CYG48_RS09045 PF04542 Sigma-70 region 2 CYG48_RS09045 PF04545 Sigma-70, region 4 CYG48_RS09045 PF03979 Sigma-70 factor, region 1.1 CYG48_RS09045 PF00140 Sigma-70 factor, region 1.2 CYG48_RS09050 PF01807 CHC2 zinc finger CYG48_RS09050 PF08275 DNA primase catalytic core, N-terminal domain CYG48_RS09060 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CYG48_RS09060 PF00117 Glutamine amidotransferase class-I CYG48_RS09065 PF01554 MatE CYG48_RS09070 PF07690 Major Facilitator Superfamily CYG48_RS09075 PF04228 Putative neutral zinc metallopeptidase CYG48_RS09080 PF07690 Major Facilitator Superfamily CYG48_RS09085 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CYG48_RS09085 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CYG48_RS09085 PF02142 MGS-like domain CYG48_RS09105 PF03167 Uracil DNA glycosylase superfamily CYG48_RS09115 PF03449 Transcription elongation factor, N-terminal CYG48_RS09115 PF01272 Transcription elongation factor, GreA/GreB, C-term CYG48_RS09120 PF00534 Glycosyl transferases group 1 CYG48_RS09125 PF00534 Glycosyl transferases group 1 CYG48_RS09125 PF13439 Glycosyltransferase Family 4 CYG48_RS09135 PF01037 Lrp/AsnC ligand binding domain CYG48_RS09140 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYG48_RS09145 PF03466 LysR substrate binding domain CYG48_RS09145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG48_RS09155 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CYG48_RS09165 PF03466 LysR substrate binding domain CYG48_RS09165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG48_RS09175 PF01699 Sodium/calcium exchanger protein CYG48_RS09180 PF01717 Cobalamin-independent synthase, Catalytic domain CYG48_RS09185 PF07995 Glucose / Sorbosone dehydrogenase CYG48_RS09190 PF00155 Aminotransferase class I and II CYG48_RS09195 PF00313 'Cold-shock' DNA-binding domain CYG48_RS09200 PF00753 Metallo-beta-lactamase superfamily CYG48_RS09210 PF12802 MarR family CYG48_RS09215 PF00486 Transcriptional regulatory protein, C terminal CYG48_RS09215 PF00072 Response regulator receiver domain CYG48_RS09220 PF00672 HAMP domain CYG48_RS09220 PF00512 His Kinase A (phospho-acceptor) domain CYG48_RS09220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG48_RS09220 PF16527 Two-component sensor protein CpxA, periplasmic domain CYG48_RS09225 PF01588 Putative tRNA binding domain CYG48_RS09230 PF03807 NADP oxidoreductase coenzyme F420-dependent CYG48_RS09230 PF14748 Pyrroline-5-carboxylate reductase dimerisation CYG48_RS09245 PF01790 Prolipoprotein diacylglyceryl transferase CYG48_RS09255 PF02578 Multi-copper polyphenol oxidoreductase laccase CYG48_RS09270 PF14572 Phosphoribosyl synthetase-associated domain CYG48_RS09270 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CYG48_RS09280 PF13188 PAS domain CYG48_RS09280 PF03707 Bacterial signalling protein N terminal repeat CYG48_RS09280 PF00990 Diguanylate cyclase, GGDEF domain CYG48_RS09280 PF00563 EAL domain CYG48_RS09290 PF01386 Ribosomal L25p family CYG48_RS09290 PF14693 Ribosomal protein TL5, C-terminal domain CYG48_RS09295 PF03707 Bacterial signalling protein N terminal repeat CYG48_RS09295 PF13188 PAS domain CYG48_RS09295 PF00990 Diguanylate cyclase, GGDEF domain CYG48_RS09295 PF00563 EAL domain CYG48_RS09300 PF01195 Peptidyl-tRNA hydrolase CYG48_RS09305 PF05175 Methyltransferase small domain CYG48_RS09310 PF02617 ATP-dependent Clp protease adaptor protein ClpS CYG48_RS09315 PF06071 Protein of unknown function (DUF933) CYG48_RS09315 PF01926 50S ribosome-binding GTPase CYG48_RS09330 PF00156 Phosphoribosyl transferase domain CYG48_RS09335 PF00033 Cytochrome b/b6/petB CYG48_RS09335 PF02167 Cytochrome C1 family CYG48_RS09335 PF00032 Cytochrome b(C-terminal)/b6/petD CYG48_RS09340 PF00032 Cytochrome b(C-terminal)/b6/petD CYG48_RS09340 PF00033 Cytochrome b/b6/petB CYG48_RS09345 PF00355 Rieske [2Fe-2S] domain CYG48_RS09345 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal CYG48_RS09355 PF00005 ABC transporter CYG48_RS09355 PF00664 ABC transporter transmembrane region CYG48_RS09360 PF00664 ABC transporter transmembrane region CYG48_RS09360 PF00005 ABC transporter CYG48_RS09365 PF00588 SpoU rRNA Methylase family CYG48_RS09370 PF02690 Na+/Pi-cotransporter CYG48_RS09380 PF01218 Coproporphyrinogen III oxidase CYG48_RS09395 PF12627 Probable RNA and SrmB- binding site of polymerase A CYG48_RS09395 PF13735 tRNA nucleotidyltransferase domain 2 putative CYG48_RS09395 PF01743 Poly A polymerase head domain CYG48_RS09400 PF00293 NUDIX domain CYG48_RS09410 PF17863 AAA lid domain CYG48_RS09410 PF07726 ATPase family associated with various cellular activities (AAA) CYG48_RS09430 PF00583 Acetyltransferase (GNAT) family CYG48_RS09435 PF00583 Acetyltransferase (GNAT) family CYG48_RS09440 PF07690 Major Facilitator Superfamily CYG48_RS09450 PF13409 Glutathione S-transferase, N-terminal domain CYG48_RS09455 PF01266 FAD dependent oxidoreductase CYG48_RS09470 PF04542 Sigma-70 region 2 CYG48_RS09470 PF08281 Sigma-70, region 4 CYG48_RS09480 PF08502 LeuA allosteric (dimerisation) domain CYG48_RS09480 PF00682 HMGL-like CYG48_RS09485 PF03594 Benzoate membrane transport protein CYG48_RS09490 PF13188 PAS domain CYG48_RS09490 PF03707 Bacterial signalling protein N terminal repeat CYG48_RS09490 PF00990 Diguanylate cyclase, GGDEF domain CYG48_RS09490 PF00563 EAL domain CYG48_RS09495 PF00574 Clp protease CYG48_RS09500 PF04955 HupE / UreJ protein CYG48_RS09505 PF14489 QueF-like protein CYG48_RS09510 PF16916 Dimerisation domain of Zinc Transporter CYG48_RS09510 PF01545 Cation efflux family CYG48_RS09525 PF00425 chorismate binding enzyme CYG48_RS09525 PF04715 Anthranilate synthase component I, N terminal region CYG48_RS09525 PF00117 Glutamine amidotransferase class-I CYG48_RS09535 PF01268 Formate--tetrahydrofolate ligase CYG48_RS09540 PF00196 Bacterial regulatory proteins, luxR family CYG48_RS09540 PF03472 Autoinducer binding domain CYG48_RS09560 PF00127 Copper binding proteins, plastocyanin/azurin family CYG48_RS09565 PF00265 Thymidine kinase CYG48_RS09575 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS09580 PF00005 ABC transporter CYG48_RS09580 PF00571 CBS domain CYG48_RS09590 PF01022 Bacterial regulatory protein, arsR family CYG48_RS09595 PF00202 Aminotransferase class-III CYG48_RS09600 PF00664 ABC transporter transmembrane region CYG48_RS09600 PF00005 ABC transporter CYG48_RS09605 PF00561 alpha/beta hydrolase fold CYG48_RS09610 PF01047 MarR family CYG48_RS09615 PF13458 Periplasmic binding protein CYG48_RS09620 PF13291 ACT domain CYG48_RS09620 PF00291 Pyridoxal-phosphate dependent enzyme CYG48_RS09625 PF01979 Amidohydrolase family CYG48_RS09625 PF13382 Adenine deaminase C-terminal domain CYG48_RS09640 PF12833 Helix-turn-helix domain CYG48_RS09640 PF06719 AraC-type transcriptional regulator N-terminus CYG48_RS09645 PF01022 Bacterial regulatory protein, arsR family CYG48_RS09660 PF00128 Alpha amylase, catalytic domain CYG48_RS09665 PF00294 pfkB family carbohydrate kinase CYG48_RS09670 PF01926 50S ribosome-binding GTPase CYG48_RS09670 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CYG48_RS09685 PF05992 SbmA/BacA-like family CYG48_RS09700 PF00557 Metallopeptidase family M24 CYG48_RS09715 PF13426 PAS domain CYG48_RS09715 PF13581 Histidine kinase-like ATPase domain CYG48_RS09715 PF07536 HWE histidine kinase CYG48_RS09725 PF08281 Sigma-70, region 4 CYG48_RS09725 PF04542 Sigma-70 region 2 CYG48_RS09730 PF03795 YCII-related domain CYG48_RS09735 PF00043 Glutathione S-transferase, C-terminal domain CYG48_RS09735 PF02798 Glutathione S-transferase, N-terminal domain CYG48_RS09745 PF00768 D-alanyl-D-alanine carboxypeptidase CYG48_RS09745 PF07943 Penicillin-binding protein 5, C-terminal domain CYG48_RS09750 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CYG48_RS09750 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CYG48_RS09760 PF00111 2Fe-2S iron-sulfur cluster binding domain CYG48_RS09760 PF01799 [2Fe-2S] binding domain CYG48_RS09765 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CYG48_RS09765 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CYG48_RS09780 PF04480 Protein of unknown function (DUF559) CYG48_RS09800 PF03466 LysR substrate binding domain CYG48_RS09800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG48_RS09810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG48_RS09810 PF03466 LysR substrate binding domain CYG48_RS09825 PF01979 Amidohydrolase family CYG48_RS09830 PF05016 ParE toxin of type II toxin-antitoxin system, parDE CYG48_RS09840 PF01070 FMN-dependent dehydrogenase CYG48_RS09845 PF01965 DJ-1/PfpI family CYG48_RS09860 PF14850 DNA-binding domain of Proline dehydrogenase CYG48_RS09860 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CYG48_RS09860 PF00171 Aldehyde dehydrogenase family CYG48_RS09860 PF01619 Proline dehydrogenase CYG48_RS09865 PF01037 Lrp/AsnC ligand binding domain CYG48_RS09885 PF00576 HIUase/Transthyretin family CYG48_RS09890 PF04115 Ureidoglycolate lyase CYG48_RS09905 PF03561 Allantoicase repeat CYG48_RS09910 PF01014 Uricase CYG48_RS09910 PF09349 OHCU decarboxylase CYG48_RS09920 PF01266 FAD dependent oxidoreductase CYG48_RS09925 PF01266 FAD dependent oxidoreductase CYG48_RS09925 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CYG48_RS09940 PF00512 His Kinase A (phospho-acceptor) domain CYG48_RS09940 PF01627 Hpt domain CYG48_RS09940 PF00072 Response regulator receiver domain CYG48_RS09940 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CYG48_RS09940 PF00672 HAMP domain CYG48_RS09940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG48_RS09950 PF00270 DEAD/DEAH box helicase CYG48_RS09950 PF00271 Helicase conserved C-terminal domain CYG48_RS09965 PF14403 Circularly permuted ATP-grasp type 2 CYG48_RS09970 PF14403 Circularly permuted ATP-grasp type 2 CYG48_RS09970 PF04168 A predicted alpha-helical domain with a conserved ER motif. CYG48_RS09975 PF08379 Bacterial transglutaminase-like N-terminal region CYG48_RS09975 PF01841 Transglutaminase-like superfamily CYG48_RS10000 PF01000 RNA polymerase Rpb3/RpoA insert domain CYG48_RS10000 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CYG48_RS10000 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CYG48_RS10025 PF01152 Bacterial-like globin CYG48_RS10045 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYG48_RS10045 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CYG48_RS10050 PF01180 Dihydroorotate dehydrogenase CYG48_RS10060 PF01381 Helix-turn-helix CYG48_RS10065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG48_RS10065 PF03466 LysR substrate binding domain CYG48_RS10070 PF03601 Conserved hypothetical protein 698 CYG48_RS10080 PF00120 Glutamine synthetase, catalytic domain CYG48_RS10080 PF03951 Glutamine synthetase, beta-Grasp domain CYG48_RS10085 PF08362 YcdC-like protein, C-terminal region CYG48_RS10085 PF00440 Bacterial regulatory proteins, tetR family CYG48_RS10090 PF07687 Peptidase dimerisation domain CYG48_RS10090 PF01546 Peptidase family M20/M25/M40 CYG48_RS10100 PF01979 Amidohydrolase family CYG48_RS10110 PF00005 ABC transporter CYG48_RS10115 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS10120 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS10135 PF00873 AcrB/AcrD/AcrF family CYG48_RS10140 PF13545 Crp-like helix-turn-helix domain CYG48_RS10140 PF00027 Cyclic nucleotide-binding domain CYG48_RS10150 PF02492 CobW/HypB/UreG, nucleotide-binding domain CYG48_RS10155 PF01730 UreF CYG48_RS10160 PF02814 UreE urease accessory protein, N-terminal domain CYG48_RS10160 PF05194 UreE urease accessory protein, C-terminal domain CYG48_RS10165 PF00449 Urease alpha-subunit, N-terminal domain CYG48_RS10165 PF01979 Amidohydrolase family CYG48_RS10170 PF07007 Lysozyme inhibitor LprI CYG48_RS10175 PF00699 Urease beta subunit CYG48_RS10180 PF00547 Urease, gamma subunit CYG48_RS10185 PF01774 UreD urease accessory protein CYG48_RS10195 PF16657 Maltogenic Amylase, C-terminal domain CYG48_RS10195 PF00128 Alpha amylase, catalytic domain CYG48_RS10205 PF13458 Periplasmic binding protein CYG48_RS10215 PF00005 ABC transporter CYG48_RS10220 PF12399 Branched-chain amino acid ATP-binding cassette transporter CYG48_RS10220 PF00005 ABC transporter CYG48_RS10225 PF11862 Domain of unknown function (DUF3382) CYG48_RS10225 PF02653 Branched-chain amino acid transport system / permease component CYG48_RS10230 PF02653 Branched-chain amino acid transport system / permease component CYG48_RS10260 PF00072 Response regulator receiver domain CYG48_RS10260 PF00486 Transcriptional regulatory protein, C terminal CYG48_RS10270 PF10090 Histidine phosphotransferase C-terminal domain CYG48_RS10285 PF00588 SpoU rRNA Methylase family CYG48_RS10295 PF00849 RNA pseudouridylate synthase CYG48_RS10300 PF00140 Sigma-70 factor, region 1.2 CYG48_RS10300 PF04545 Sigma-70, region 4 CYG48_RS10300 PF04542 Sigma-70 region 2 CYG48_RS10310 PF00709 Adenylosuccinate synthetase CYG48_RS10335 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CYG48_RS10340 PF03167 Uracil DNA glycosylase superfamily CYG48_RS10345 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CYG48_RS10350 PF16363 GDP-mannose 4,6 dehydratase CYG48_RS10355 PF04304 Protein of unknown function (DUF454) CYG48_RS10385 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYG48_RS10385 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CYG48_RS10390 PF02817 e3 binding domain CYG48_RS10390 PF00364 Biotin-requiring enzyme CYG48_RS10390 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CYG48_RS10395 PF02780 Transketolase, C-terminal domain CYG48_RS10395 PF02779 Transketolase, pyrimidine binding domain CYG48_RS10400 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal CYG48_RS10400 PF00676 Dehydrogenase E1 component CYG48_RS10405 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CYG48_RS10405 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CYG48_RS10405 PF02770 Acyl-CoA dehydrogenase, middle domain CYG48_RS10410 PF00128 Alpha amylase, catalytic domain CYG48_RS10410 PF11941 Domain of unknown function (DUF3459) CYG48_RS10410 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CYG48_RS10415 PF00128 Alpha amylase, catalytic domain CYG48_RS10420 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYG48_RS10475 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CYG48_RS10475 PF13244 Domain of unknown function (DUF4040) CYG48_RS10475 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter CYG48_RS10475 PF00361 Proton-conducting membrane transporter CYG48_RS10480 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CYG48_RS10485 PF00361 Proton-conducting membrane transporter CYG48_RS10490 PF01899 Na+/H+ ion antiporter subunit CYG48_RS10495 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) CYG48_RS10500 PF03334 Na+/H+ antiporter subunit CYG48_RS10505 PF01425 Amidase CYG48_RS10545 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CYG48_RS10545 PF01842 ACT domain CYG48_RS10545 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CYG48_RS10560 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CYG48_RS10560 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CYG48_RS10560 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CYG48_RS10560 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CYG48_RS10595 PF06480 FtsH Extracellular CYG48_RS10595 PF17862 AAA+ lid domain CYG48_RS10595 PF00004 ATPase family associated with various cellular activities (AAA) CYG48_RS10595 PF01434 Peptidase family M41 CYG48_RS10600 PF01171 PP-loop family CYG48_RS10610 PF00691 OmpA family CYG48_RS10615 PF04052 TolB amino-terminal domain CYG48_RS10615 PF07676 WD40-like Beta Propeller Repeat CYG48_RS10625 PF02472 Biopolymer transport protein ExbD/TolR CYG48_RS10630 PF01618 MotA/TolQ/ExbB proton channel family CYG48_RS10635 PF03061 Thioesterase superfamily CYG48_RS10645 PF00149 Calcineurin-like phosphoesterase CYG48_RS10645 PF10518 TAT (twin-arginine translocation) pathway signal sequence CYG48_RS10650 PF05496 Holliday junction DNA helicase RuvB P-loop domain CYG48_RS10650 PF05491 RuvB C-terminal winged helix domain CYG48_RS10650 PF17864 RuvB AAA lid domain CYG48_RS10655 PF07499 RuvA, C-terminal domain CYG48_RS10655 PF01330 RuvA N terminal domain CYG48_RS10670 PF02075 Crossover junction endodeoxyribonuclease RuvC CYG48_RS10680 PF00296 Luciferase-like monooxygenase CYG48_RS10685 PF01709 Transcriptional regulator CYG48_RS10705 PF13277 YmdB-like protein CYG48_RS10715 PF01595 Cyclin M transmembrane N-terminal domain CYG48_RS10715 PF00571 CBS domain CYG48_RS10715 PF03471 Transporter associated domain CYG48_RS10720 PF13581 Histidine kinase-like ATPase domain CYG48_RS10720 PF07568 Histidine kinase CYG48_RS10720 PF13426 PAS domain CYG48_RS10725 PF00072 Response regulator receiver domain CYG48_RS10755 PF00456 Transketolase, thiamine diphosphate binding domain CYG48_RS10755 PF02780 Transketolase, C-terminal domain CYG48_RS10755 PF02779 Transketolase, pyrimidine binding domain CYG48_RS10760 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CYG48_RS10760 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CYG48_RS10765 PF03471 Transporter associated domain CYG48_RS10765 PF02080 TrkA-C domain CYG48_RS10765 PF00999 Sodium/hydrogen exchanger family CYG48_RS10770 PF00162 Phosphoglycerate kinase CYG48_RS10775 PF00274 Fructose-bisphosphate aldolase class-I CYG48_RS10805 PF01197 Ribosomal protein L31 CYG48_RS10810 PF00005 ABC transporter CYG48_RS10810 PF00664 ABC transporter transmembrane region CYG48_RS10825 PF00691 OmpA family CYG48_RS10825 PF01389 OmpA-like transmembrane domain CYG48_RS10835 PF00459 Inositol monophosphatase family CYG48_RS10850 PF02581 Thiamine monophosphate synthase CYG48_RS10860 PF01022 Bacterial regulatory protein, arsR family CYG48_RS10875 PF00731 AIR carboxylase CYG48_RS10880 PF02222 ATP-grasp domain CYG48_RS10880 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CYG48_RS10885 PF00444 Ribosomal protein L36 CYG48_RS10895 PF12697 Alpha/beta hydrolase family CYG48_RS10900 PF02887 Pyruvate kinase, alpha/beta domain CYG48_RS10900 PF00224 Pyruvate kinase, barrel domain CYG48_RS10920 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) CYG48_RS10935 PF00158 Sigma-54 interaction domain CYG48_RS10935 PF00072 Response regulator receiver domain CYG48_RS10935 PF02954 Bacterial regulatory protein, Fis family CYG48_RS10945 PF04715 Anthranilate synthase component I, N terminal region CYG48_RS10945 PF00425 chorismate binding enzyme CYG48_RS10945 PF00117 Glutamine amidotransferase class-I CYG48_RS10955 PF03435 Saccharopine dehydrogenase NADP binding domain CYG48_RS10955 PF16653 Saccharopine dehydrogenase C-terminal domain CYG48_RS10965 PF00149 Calcineurin-like phosphoesterase CYG48_RS10965 PF02872 5'-nucleotidase, C-terminal domain CYG48_RS10970 PF00762 Ferrochelatase CYG48_RS10975 PF01494 FAD binding domain CYG48_RS10980 PF16200 C-terminal region of band_7 CYG48_RS10980 PF01145 SPFH domain / Band 7 family CYG48_RS10990 PF01380 SIS domain CYG48_RS10990 PF00571 CBS domain CYG48_RS11000 PF00483 Nucleotidyl transferase CYG48_RS11005 PF13406 Transglycosylase SLT domain CYG48_RS11015 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CYG48_RS11015 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYG48_RS11020 PF04898 Glutamate synthase central domain CYG48_RS11020 PF00310 Glutamine amidotransferases class-II CYG48_RS11020 PF01493 GXGXG motif CYG48_RS11020 PF01645 Conserved region in glutamate synthase CYG48_RS11025 PF01212 Beta-eliminating lyase CYG48_RS11040 PF13593 SBF-like CPA transporter family (DUF4137) CYG48_RS11045 PF00011 Hsp20/alpha crystallin family CYG48_RS11055 PF00459 Inositol monophosphatase family CYG48_RS11065 PF00072 Response regulator receiver domain CYG48_RS11095 PF13361 UvrD-like helicase C-terminal domain CYG48_RS11095 PF00580 UvrD/REP helicase N-terminal domain CYG48_RS11105 PF00005 ABC transporter CYG48_RS11115 PF14403 Circularly permuted ATP-grasp type 2 CYG48_RS11115 PF04168 A predicted alpha-helical domain with a conserved ER motif. CYG48_RS11120 PF08379 Bacterial transglutaminase-like N-terminal region CYG48_RS11120 PF01841 Transglutaminase-like superfamily CYG48_RS11130 PF00343 Carbohydrate phosphorylase CYG48_RS11135 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CYG48_RS11135 PF00128 Alpha amylase, catalytic domain CYG48_RS11135 PF02806 Alpha amylase, C-terminal all-beta domain CYG48_RS11140 PF00483 Nucleotidyl transferase CYG48_RS11145 PF00534 Glycosyl transferases group 1 CYG48_RS11145 PF08323 Starch synthase catalytic domain CYG48_RS11150 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CYG48_RS11150 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CYG48_RS11150 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CYG48_RS11150 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CYG48_RS11155 PF18390 Glycogen debranching enzyme C-terminal domain CYG48_RS11155 PF00128 Alpha amylase, catalytic domain CYG48_RS11155 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CYG48_RS11160 PF01575 MaoC like domain CYG48_RS11170 PF17806 Sarcosine oxidase A3 domain CYG48_RS11170 PF01571 Aminomethyltransferase folate-binding domain CYG48_RS11170 PF08669 Glycine cleavage T-protein C-terminal barrel domain CYG48_RS11170 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYG48_RS11180 PF01266 FAD dependent oxidoreductase CYG48_RS11190 PF00698 Acyl transferase domain CYG48_RS11190 PF08240 Alcohol dehydrogenase GroES-like domain CYG48_RS11190 PF08990 Erythronolide synthase docking CYG48_RS11190 PF16197 Ketoacyl-synthetase C-terminal extension CYG48_RS11190 PF14765 Polyketide synthase dehydratase CYG48_RS11190 PF00109 Beta-ketoacyl synthase, N-terminal domain CYG48_RS11190 PF02801 Beta-ketoacyl synthase, C-terminal domain CYG48_RS11190 PF08659 KR domain CYG48_RS11190 PF00550 Phosphopantetheine attachment site CYG48_RS11190 PF09277 Erythronolide synthase, docking CYG48_RS11195 PF01165 Ribosomal protein S21 CYG48_RS11215 PF02233 NAD(P) transhydrogenase beta subunit CYG48_RS11220 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CYG48_RS11225 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CYG48_RS11225 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CYG48_RS11240 PF00990 Diguanylate cyclase, GGDEF domain CYG48_RS11240 PF08447 PAS fold CYG48_RS11240 PF08448 PAS fold CYG48_RS11240 PF00563 EAL domain CYG48_RS11250 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CYG48_RS11255 PF03480 Bacterial extracellular solute-binding protein, family 7 CYG48_RS11260 PF07722 Peptidase C26 CYG48_RS11265 PF00356 Bacterial regulatory proteins, lacI family CYG48_RS11270 PF01047 MarR family CYG48_RS11275 PF02633 Creatinine amidohydrolase CYG48_RS11285 PF01850 PIN domain CYG48_RS11290 PF02492 CobW/HypB/UreG, nucleotide-binding domain CYG48_RS11290 PF07683 Cobalamin synthesis protein cobW C-terminal domain CYG48_RS11315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG48_RS11315 PF03466 LysR substrate binding domain CYG48_RS11330 PF00583 Acetyltransferase (GNAT) family CYG48_RS11335 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CYG48_RS11335 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CYG48_RS11340 PF03466 LysR substrate binding domain CYG48_RS11340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG48_RS11350 PF03824 High-affinity nickel-transport protein CYG48_RS11355 PF03466 LysR substrate binding domain CYG48_RS11355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG48_RS11360 PF00248 Aldo/keto reductase family CYG48_RS11380 PF01081 KDPG and KHG aldolase CYG48_RS11385 PF01928 CYTH domain CYG48_RS11395 PF00581 Rhodanese-like domain CYG48_RS11395 PF17773 UPF0176 acylphosphatase like domain CYG48_RS11400 PF13188 PAS domain CYG48_RS11400 PF03707 Bacterial signalling protein N terminal repeat CYG48_RS11400 PF00563 EAL domain CYG48_RS11400 PF00990 Diguanylate cyclase, GGDEF domain CYG48_RS11405 PF03180 NLPA lipoprotein CYG48_RS11410 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS11415 PF00005 ABC transporter CYG48_RS11415 PF09383 NIL domain CYG48_RS11420 PF00232 Glycosyl hydrolase family 1 CYG48_RS11425 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CYG48_RS11425 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CYG48_RS11430 PF00132 Bacterial transferase hexapeptide (six repeats) CYG48_RS11440 PF13407 Periplasmic binding protein domain CYG48_RS11445 PF02653 Branched-chain amino acid transport system / permease component CYG48_RS11450 PF00005 ABC transporter CYG48_RS11455 PF01261 Xylose isomerase-like TIM barrel CYG48_RS11460 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CYG48_RS11460 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CYG48_RS11465 PF00356 Bacterial regulatory proteins, lacI family CYG48_RS11470 PF07690 Major Facilitator Superfamily CYG48_RS11475 PF13533 Biotin-lipoyl like CYG48_RS11480 PF17922 Tetracyclin repressor-like, C-terminal domain CYG48_RS11480 PF00440 Bacterial regulatory proteins, tetR family CYG48_RS11485 PF03741 Integral membrane protein TerC family CYG48_RS11485 PF03471 Transporter associated domain CYG48_RS11490 PF03600 Citrate transporter CYG48_RS11490 PF02080 TrkA-C domain CYG48_RS11495 PF00749 tRNA synthetases class I (E and Q), catalytic domain CYG48_RS11500 PF00152 tRNA synthetases class II (D, K and N) CYG48_RS11500 PF01336 OB-fold nucleic acid binding domain CYG48_RS11510 PF00923 Transaldolase/Fructose-6-phosphate aldolase CYG48_RS11515 PF13936 Helix-turn-helix domain CYG48_RS11515 PF04198 Putative sugar-binding domain CYG48_RS11520 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CYG48_RS11520 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CYG48_RS11530 PF00633 Helix-hairpin-helix motif CYG48_RS11530 PF00730 HhH-GPD superfamily base excision DNA repair protein CYG48_RS11530 PF10576 Iron-sulfur binding domain of endonuclease III CYG48_RS11545 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CYG48_RS11550 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS11555 PF12911 N-terminal TM domain of oligopeptide transport permease C CYG48_RS11555 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS11560 PF01425 Amidase CYG48_RS11575 PF08281 Sigma-70, region 4 CYG48_RS11575 PF04542 Sigma-70 region 2 CYG48_RS11585 PF00072 Response regulator receiver domain CYG48_RS11590 PF07536 HWE histidine kinase CYG48_RS11590 PF13426 PAS domain CYG48_RS11590 PF08447 PAS fold CYG48_RS11595 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS11595 PF12911 N-terminal TM domain of oligopeptide transport permease C CYG48_RS11600 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS11605 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CYG48_RS11610 PF01546 Peptidase family M20/M25/M40 CYG48_RS11610 PF07687 Peptidase dimerisation domain CYG48_RS11615 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CYG48_RS11615 PF00005 ABC transporter CYG48_RS11620 PF00325 Bacterial regulatory proteins, crp family CYG48_RS11620 PF04198 Putative sugar-binding domain CYG48_RS11630 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS11635 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS11640 PF08402 TOBE domain CYG48_RS11640 PF00005 ABC transporter CYG48_RS11645 PF08125 Mannitol dehydrogenase C-terminal domain CYG48_RS11645 PF01232 Mannitol dehydrogenase Rossmann domain CYG48_RS11650 PF13419 Haloacid dehalogenase-like hydrolase CYG48_RS11655 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CYG48_RS11655 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CYG48_RS11660 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CYG48_RS11660 PF00005 ABC transporter CYG48_RS11665 PF00005 ABC transporter CYG48_RS11665 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CYG48_RS11670 PF12911 N-terminal TM domain of oligopeptide transport permease C CYG48_RS11670 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS11675 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS11680 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CYG48_RS11685 PF01244 Membrane dipeptidase (Peptidase family M19) CYG48_RS11700 PF08402 TOBE domain CYG48_RS11700 PF00005 ABC transporter CYG48_RS11710 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS11720 PF00356 Bacterial regulatory proteins, lacI family CYG48_RS11725 PF01425 Amidase CYG48_RS11730 PF03466 LysR substrate binding domain CYG48_RS11730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG48_RS11735 PF02770 Acyl-CoA dehydrogenase, middle domain CYG48_RS11735 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CYG48_RS11735 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CYG48_RS11740 PF00171 Aldehyde dehydrogenase family CYG48_RS11745 PF08713 DNA alkylation repair enzyme CYG48_RS11750 PF00005 ABC transporter CYG48_RS11755 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS11760 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS11770 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CYG48_RS11770 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CYG48_RS11775 PF00378 Enoyl-CoA hydratase/isomerase CYG48_RS11780 PF00732 GMC oxidoreductase CYG48_RS11780 PF05199 GMC oxidoreductase CYG48_RS11785 PF11862 Domain of unknown function (DUF3382) CYG48_RS11785 PF02653 Branched-chain amino acid transport system / permease component CYG48_RS11790 PF02653 Branched-chain amino acid transport system / permease component CYG48_RS11795 PF00005 ABC transporter CYG48_RS11800 PF12399 Branched-chain amino acid ATP-binding cassette transporter CYG48_RS11800 PF00005 ABC transporter CYG48_RS11815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG48_RS11815 PF08448 PAS fold CYG48_RS11815 PF13188 PAS domain CYG48_RS11815 PF00072 Response regulator receiver domain CYG48_RS11815 PF00512 His Kinase A (phospho-acceptor) domain CYG48_RS11830 PF01011 PQQ enzyme repeat CYG48_RS11845 PF08281 Sigma-70, region 4 CYG48_RS11845 PF04542 Sigma-70 region 2 CYG48_RS11850 PF02735 Ku70/Ku80 beta-barrel domain CYG48_RS11855 PF13298 DNA polymerase Ligase (LigD) CYG48_RS11855 PF01068 ATP dependent DNA ligase domain CYG48_RS11855 PF04679 ATP dependent DNA ligase C terminal region CYG48_RS11860 PF02735 Ku70/Ku80 beta-barrel domain CYG48_RS11870 PF05974 Domain of unknown function (DUF892) CYG48_RS11885 PF08323 Starch synthase catalytic domain CYG48_RS11885 PF00534 Glycosyl transferases group 1 CYG48_RS11890 PF00128 Alpha amylase, catalytic domain CYG48_RS11890 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CYG48_RS11910 PF00034 Cytochrome c CYG48_RS11925 PF00115 Cytochrome C and Quinol oxidase polypeptide I CYG48_RS11930 PF00034 Cytochrome c CYG48_RS11930 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CYG48_RS11930 PF02790 Cytochrome C oxidase subunit II, transmembrane domain CYG48_RS11940 PF01965 DJ-1/PfpI family CYG48_RS11950 PF13426 PAS domain CYG48_RS11950 PF08447 PAS fold CYG48_RS11950 PF07536 HWE histidine kinase CYG48_RS11960 PF08402 TOBE domain CYG48_RS11960 PF00005 ABC transporter CYG48_RS11965 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS11970 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS11975 PF01547 Bacterial extracellular solute-binding protein CYG48_RS11980 PF00356 Bacterial regulatory proteins, lacI family CYG48_RS11985 PF01970 Tripartite tricarboxylate transporter TctA family CYG48_RS11995 PF03401 Tripartite tricarboxylate transporter family receptor CYG48_RS12000 PF00072 Response regulator receiver domain CYG48_RS12000 PF02954 Bacterial regulatory protein, Fis family CYG48_RS12000 PF00158 Sigma-54 interaction domain CYG48_RS12005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG48_RS12005 PF02743 Cache domain CYG48_RS12005 PF00512 His Kinase A (phospho-acceptor) domain CYG48_RS12015 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CYG48_RS12015 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYG48_RS12020 PF00733 Asparagine synthase CYG48_RS12020 PF13537 Glutamine amidotransferase domain CYG48_RS12040 PF13091 PLD-like domain CYG48_RS12045 PF03706 Lysylphosphatidylglycerol synthase TM region CYG48_RS12055 PF00156 Phosphoribosyl transferase domain CYG48_RS12055 PF01738 Dienelactone hydrolase family CYG48_RS12080 PF00296 Luciferase-like monooxygenase CYG48_RS12090 PF00155 Aminotransferase class I and II CYG48_RS12105 PF00155 Aminotransferase class I and II CYG48_RS12110 PF00174 Oxidoreductase molybdopterin binding domain CYG48_RS12115 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CYG48_RS12115 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CYG48_RS12120 PF03450 CO dehydrogenase flavoprotein C-terminal domain CYG48_RS12120 PF00941 FAD binding domain in molybdopterin dehydrogenase CYG48_RS12125 PF01799 [2Fe-2S] binding domain CYG48_RS12125 PF00111 2Fe-2S iron-sulfur cluster binding domain CYG48_RS12125 PF10518 TAT (twin-arginine translocation) pathway signal sequence CYG48_RS12130 PF00440 Bacterial regulatory proteins, tetR family CYG48_RS12130 PF17925 Tetracyclin repressor-like, C-terminal domain CYG48_RS12135 PF00485 Phosphoribulokinase / Uridine kinase family CYG48_RS12140 PF01055 Glycosyl hydrolases family 31 CYG48_RS12145 PF00392 Bacterial regulatory proteins, gntR family CYG48_RS12145 PF07702 UTRA domain CYG48_RS12150 PF00296 Luciferase-like monooxygenase CYG48_RS12155 PF00248 Aldo/keto reductase family CYG48_RS12160 PF01613 Flavin reductase like domain CYG48_RS12165 PF00155 Aminotransferase class I and II CYG48_RS12170 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CYG48_RS12170 PF17854 FtsK alpha domain CYG48_RS12170 PF01580 FtsK/SpoIIIE family CYG48_RS12170 PF09397 Ftsk gamma domain CYG48_RS12175 PF08376 Nitrate and nitrite sensing CYG48_RS12175 PF03861 ANTAR domain CYG48_RS12190 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS12195 PF00005 ABC transporter CYG48_RS12200 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CYG48_RS12200 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYG48_RS12200 PF18267 Rubredoxin NAD+ reductase C-terminal domain CYG48_RS12200 PF04324 BFD-like [2Fe-2S] binding domain CYG48_RS12200 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CYG48_RS12205 PF00355 Rieske [2Fe-2S] domain CYG48_RS12210 PF00384 Molybdopterin oxidoreductase CYG48_RS12210 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CYG48_RS12210 PF04324 BFD-like [2Fe-2S] binding domain CYG48_RS12210 PF01568 Molydopterin dinucleotide binding domain CYG48_RS12230 PF00266 Aminotransferase class-V CYG48_RS12240 PF00669 Bacterial flagellin N-terminal helical region CYG48_RS12240 PF00700 Bacterial flagellin C-terminal helical region CYG48_RS12245 PF00669 Bacterial flagellin N-terminal helical region CYG48_RS12245 PF00700 Bacterial flagellin C-terminal helical region CYG48_RS12250 PF00669 Bacterial flagellin N-terminal helical region CYG48_RS12250 PF00700 Bacterial flagellin C-terminal helical region CYG48_RS12260 PF01070 FMN-dependent dehydrogenase CYG48_RS12265 PF00348 Polyprenyl synthetase CYG48_RS12275 PF01593 Flavin containing amine oxidoreductase CYG48_RS12285 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CYG48_RS12285 PF10518 TAT (twin-arginine translocation) pathway signal sequence CYG48_RS12300 PF00005 ABC transporter CYG48_RS12300 PF17912 MalK OB fold domain CYG48_RS12305 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS12310 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS12315 PF01547 Bacterial extracellular solute-binding protein CYG48_RS12325 PF02308 MgtC family CYG48_RS12335 PF01047 MarR family CYG48_RS12340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG48_RS12340 PF00072 Response regulator receiver domain CYG48_RS12340 PF07495 Y_Y_Y domain CYG48_RS12340 PF07494 Two component regulator propeller CYG48_RS12340 PF00512 His Kinase A (phospho-acceptor) domain CYG48_RS12340 PF12833 Helix-turn-helix domain CYG48_RS12345 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal CYG48_RS12345 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal CYG48_RS12350 PF01613 Flavin reductase like domain CYG48_RS12360 PF00171 Aldehyde dehydrogenase family CYG48_RS12365 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CYG48_RS12370 PF01557 Fumarylacetoacetate (FAA) hydrolase family CYG48_RS12375 PF01557 Fumarylacetoacetate (FAA) hydrolase family CYG48_RS12380 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CYG48_RS12380 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CYG48_RS12380 PF00205 Thiamine pyrophosphate enzyme, central domain CYG48_RS12405 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CYG48_RS12430 PF13411 MerR HTH family regulatory protein CYG48_RS12440 PF01970 Tripartite tricarboxylate transporter TctA family CYG48_RS12450 PF03401 Tripartite tricarboxylate transporter family receptor CYG48_RS12455 PF08240 Alcohol dehydrogenase GroES-like domain CYG48_RS12455 PF00107 Zinc-binding dehydrogenase CYG48_RS12495 PF01551 Peptidase family M23 CYG48_RS12495 PF01464 Transglycosylase SLT domain CYG48_RS12495 PF10145 Phage-related minor tail protein CYG48_RS12500 PF00004 ATPase family associated with various cellular activities (AAA) CYG48_RS12500 PF10431 C-terminal, D2-small domain, of ClpB protein CYG48_RS12500 PF17871 AAA lid domain CYG48_RS12500 PF02861 Clp amino terminal domain, pathogenicity island component CYG48_RS12500 PF07724 AAA domain (Cdc48 subfamily) CYG48_RS12510 PF05175 Methyltransferase small domain CYG48_RS12510 PF17827 PrmC N-terminal domain CYG48_RS12515 PF03462 PCRF domain CYG48_RS12515 PF00472 RF-1 domain CYG48_RS12520 PF05524 PEP-utilising enzyme, N-terminal CYG48_RS12520 PF02896 PEP-utilising enzyme, TIM barrel domain CYG48_RS12520 PF00391 PEP-utilising enzyme, mobile domain CYG48_RS12525 PF00696 Amino acid kinase family CYG48_RS12525 PF01842 ACT domain CYG48_RS12525 PF13840 ACT domain CYG48_RS12535 PF00356 Bacterial regulatory proteins, lacI family CYG48_RS12540 PF07470 Glycosyl Hydrolase Family 88 CYG48_RS12545 PF04962 KduI/IolB family CYG48_RS12560 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS12565 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS12570 PF17912 MalK OB fold domain CYG48_RS12570 PF00005 ABC transporter CYG48_RS12590 PF08241 Methyltransferase domain CYG48_RS12600 PF00795 Carbon-nitrogen hydrolase CYG48_RS12605 PF00462 Glutaredoxin CYG48_RS12610 PF00156 Phosphoribosyl transferase domain CYG48_RS12615 PF08241 Methyltransferase domain CYG48_RS12630 PF00293 NUDIX domain CYG48_RS12640 PF01960 ArgJ family CYG48_RS12645 PF00639 PPIC-type PPIASE domain CYG48_RS12650 PF01043 SecA preprotein cross-linking domain CYG48_RS12650 PF07517 SecA DEAD-like domain CYG48_RS12650 PF02810 SEC-C motif CYG48_RS12650 PF07516 SecA Wing and Scaffold domain CYG48_RS12665 PF00501 AMP-binding enzyme CYG48_RS12665 PF13193 AMP-binding enzyme C-terminal domain CYG48_RS12715 PF00712 DNA polymerase III beta subunit, N-terminal domain CYG48_RS12715 PF02767 DNA polymerase III beta subunit, central domain CYG48_RS12715 PF02768 DNA polymerase III beta subunit, C-terminal domain CYG48_RS12735 PF00665 Integrase core domain CYG48_RS12740 PF01695 IstB-like ATP binding protein CYG48_RS12745 PF13333 Integrase core domain CYG48_RS12745 PF13276 HTH-like domain CYG48_RS12745 PF00665 Integrase core domain CYG48_RS12765 PF00535 Glycosyl transferase family 2 CYG48_RS12795 PF00182 Chitinase class I CYG48_RS12840 PF00487 Fatty acid desaturase CYG48_RS12865 PF01695 IstB-like ATP binding protein CYG48_RS12870 PF00665 Integrase core domain CYG48_RS12920 PF00749 tRNA synthetases class I (E and Q), catalytic domain CYG48_RS12925 PF03631 Virulence factor BrkB CYG48_RS12930 PF00106 short chain dehydrogenase CYG48_RS12940 PF01923 Cobalamin adenosyltransferase CYG48_RS12950 PF01012 Electron transfer flavoprotein domain CYG48_RS12955 PF01012 Electron transfer flavoprotein domain CYG48_RS12955 PF00766 Electron transfer flavoprotein FAD-binding domain CYG48_RS12960 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CYG48_RS12960 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CYG48_RS12965 PF08534 Redoxin CYG48_RS12970 PF00206 Lyase CYG48_RS12970 PF14698 Argininosuccinate lyase C-terminal CYG48_RS12980 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CYG48_RS12980 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CYG48_RS12990 PF00072 Response regulator receiver domain CYG48_RS12995 PF00156 Phosphoribosyl transferase domain CYG48_RS13005 PF00005 ABC transporter CYG48_RS13025 PF04752 ChaC-like protein CYG48_RS13035 PF02153 Prephenate dehydrogenase CYG48_RS13040 PF00155 Aminotransferase class I and II CYG48_RS13045 PF01209 ubiE/COQ5 methyltransferase family CYG48_RS13050 PF16123 Hydroxyacylglutathione hydrolase C-terminus CYG48_RS13050 PF00753 Metallo-beta-lactamase superfamily CYG48_RS13070 PF00830 Ribosomal L28 family CYG48_RS13075 PF02592 Putative vitamin uptake transporter CYG48_RS13085 PF11775 Cobalamin biosynthesis protein CobT VWA domain CYG48_RS13085 PF06213 Cobalamin biosynthesis protein CobT CYG48_RS13090 PF12556 Cobaltochelatase CobS subunit N terminal CYG48_RS13090 PF08406 CbbQ/NirQ/NorQ C-terminal CYG48_RS13090 PF07728 AAA domain (dynein-related subfamily) CYG48_RS13095 PF00226 DnaJ domain CYG48_RS13100 PF01722 BolA-like protein CYG48_RS13105 PF03471 Transporter associated domain CYG48_RS13105 PF01595 Cyclin M transmembrane N-terminal domain CYG48_RS13105 PF00571 CBS domain CYG48_RS13110 PF01761 3-dehydroquinate synthase CYG48_RS13115 PF01202 Shikimate kinase CYG48_RS13125 PF02899 Phage integrase, N-terminal SAM-like domain CYG48_RS13125 PF00589 Phage integrase family CYG48_RS13130 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CYG48_RS13135 PF03734 L,D-transpeptidase catalytic domain CYG48_RS13140 PF01206 Sulfurtransferase TusA CYG48_RS13145 PF07683 Cobalamin synthesis protein cobW C-terminal domain CYG48_RS13145 PF02492 CobW/HypB/UreG, nucleotide-binding domain CYG48_RS13150 PF07943 Penicillin-binding protein 5, C-terminal domain CYG48_RS13150 PF00768 D-alanyl-D-alanine carboxypeptidase CYG48_RS13155 PF07687 Peptidase dimerisation domain CYG48_RS13155 PF01546 Peptidase family M20/M25/M40 CYG48_RS13195 PF03358 NADPH-dependent FMN reductase CYG48_RS13200 PF03960 ArsC family CYG48_RS13205 PF01758 Sodium Bile acid symporter family CYG48_RS13240 PF07690 Major Facilitator Superfamily CYG48_RS13245 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CYG48_RS13250 PF00589 Phage integrase family CYG48_RS13250 PF02899 Phage integrase, N-terminal SAM-like domain CYG48_RS13260 PF00376 MerR family regulatory protein CYG48_RS13260 PF09278 MerR, DNA binding CYG48_RS13360 PF01527 Transposase CYG48_RS13365 PF05717 IS66 Orf2 like protein CYG48_RS13370 PF03050 Transposase IS66 family CYG48_RS13370 PF13817 IS66 C-terminal element CYG48_RS13370 PF13007 Transposase C of IS166 homeodomain CYG48_RS13370 PF13005 zinc-finger binding domain of transposase IS66 CYG48_RS13385 PF03852 DNA mismatch endonuclease Vsr CYG48_RS13400 PF00145 C-5 cytosine-specific DNA methylase CYG48_RS13405 PF02811 PHP domain CYG48_RS13405 PF14579 Helix-hairpin-helix motif CYG48_RS13405 PF07733 Bacterial DNA polymerase III alpha NTPase domain CYG48_RS13405 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CYG48_RS13435 PF17862 AAA+ lid domain CYG48_RS13435 PF01434 Peptidase family M41 CYG48_RS13435 PF00004 ATPase family associated with various cellular activities (AAA) CYG48_RS13445 PF01494 FAD binding domain CYG48_RS13450 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CYG48_RS13450 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CYG48_RS13450 PF13288 DXP reductoisomerase C-terminal domain CYG48_RS13455 PF00155 Aminotransferase class I and II CYG48_RS13460 PF00941 FAD binding domain in molybdopterin dehydrogenase CYG48_RS13460 PF03450 CO dehydrogenase flavoprotein C-terminal domain CYG48_RS13465 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CYG48_RS13465 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CYG48_RS13470 PF01799 [2Fe-2S] binding domain CYG48_RS13470 PF00111 2Fe-2S iron-sulfur cluster binding domain CYG48_RS13480 PF07244 Surface antigen variable number repeat CYG48_RS13480 PF01103 Surface antigen CYG48_RS13480 PF17243 POTRA domain TamA domain 1 CYG48_RS13490 PF00491 Arginase family CYG48_RS13495 PF01584 CheW-like domain CYG48_RS13500 PF13426 PAS domain CYG48_RS13500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CYG48_RS13500 PF08447 PAS fold CYG48_RS13505 PF07690 Major Facilitator Superfamily CYG48_RS13515 PF02634 FdhD/NarQ family CYG48_RS13520 PF01568 Molydopterin dinucleotide binding domain CYG48_RS13520 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CYG48_RS13520 PF00037 4Fe-4S binding domain CYG48_RS13520 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CYG48_RS13520 PF00384 Molybdopterin oxidoreductase CYG48_RS13525 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CYG48_RS13525 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CYG48_RS13525 PF00037 4Fe-4S binding domain CYG48_RS13535 PF03466 LysR substrate binding domain CYG48_RS13535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG48_RS13540 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CYG48_RS13545 PF02874 ATP synthase alpha/beta family, beta-barrel domain CYG48_RS13545 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CYG48_RS13550 PF00231 ATP synthase CYG48_RS13555 PF02874 ATP synthase alpha/beta family, beta-barrel domain CYG48_RS13555 PF00306 ATP synthase alpha/beta chain, C terminal domain CYG48_RS13555 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CYG48_RS13560 PF00213 ATP synthase delta (OSCP) subunit CYG48_RS13570 PF00270 DEAD/DEAH box helicase CYG48_RS13570 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CYG48_RS13570 PF18074 Primosomal protein N C-terminal domain CYG48_RS13570 PF17764 3′ DNA-binding domain (3′BD) CYG48_RS13585 PF02899 Phage integrase, N-terminal SAM-like domain CYG48_RS13585 PF00589 Phage integrase family CYG48_RS13605 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CYG48_RS13605 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYG48_RS13625 PF02817 e3 binding domain CYG48_RS13625 PF00364 Biotin-requiring enzyme CYG48_RS13625 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CYG48_RS13635 PF02779 Transketolase, pyrimidine binding domain CYG48_RS13635 PF16870 2-oxoglutarate dehydrogenase C-terminal CYG48_RS13635 PF00676 Dehydrogenase E1 component CYG48_RS13635 PF16078 2-oxoglutarate dehydrogenase N-terminus CYG48_RS13640 PF00549 CoA-ligase CYG48_RS13640 PF02629 CoA binding domain CYG48_RS13645 PF08442 ATP-grasp domain CYG48_RS13645 PF00549 CoA-ligase CYG48_RS13650 PF00056 lactate/malate dehydrogenase, NAD binding domain CYG48_RS13650 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CYG48_RS13655 PF03969 AFG1-like ATPase CYG48_RS13660 PF02974 Protease inhibitor Inh CYG48_RS13665 PF13237 4Fe-4S dicluster domain CYG48_RS13665 PF13085 2Fe-2S iron-sulfur cluster binding domain CYG48_RS13670 PF02910 Fumarate reductase flavoprotein C-term CYG48_RS13670 PF00890 FAD binding domain CYG48_RS13680 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CYG48_RS13705 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CYG48_RS13705 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CYG48_RS13710 PF00814 Glycoprotease family CYG48_RS13715 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CYG48_RS13715 PF03900 Porphobilinogen deaminase, C-terminal domain CYG48_RS13745 PF02325 YGGT family CYG48_RS13750 PF02594 Uncharacterised ACR, YggU family COG1872 CYG48_RS13755 PF00719 Inorganic pyrophosphatase CYG48_RS13760 PF00583 Acetyltransferase (GNAT) family CYG48_RS13765 PF00009 Elongation factor Tu GTP binding domain CYG48_RS13765 PF00679 Elongation factor G C-terminus CYG48_RS13765 PF03144 Elongation factor Tu domain 2 CYG48_RS13770 PF01432 Peptidase family M3 CYG48_RS13785 PF01047 MarR family CYG48_RS13790 PF07690 Major Facilitator Superfamily CYG48_RS13795 PF00764 Arginosuccinate synthase CYG48_RS13805 PF00106 short chain dehydrogenase CYG48_RS13810 PF01810 LysE type translocator CYG48_RS13815 PF00005 ABC transporter CYG48_RS13820 PF02653 Branched-chain amino acid transport system / permease component CYG48_RS13830 PF04055 Radical SAM superfamily CYG48_RS13840 PF04542 Sigma-70 region 2 CYG48_RS13840 PF04545 Sigma-70, region 4 CYG48_RS13850 PF01329 Pterin 4 alpha carbinolamine dehydratase CYG48_RS13855 PF02834 LigT like Phosphoesterase CYG48_RS13860 PF13472 GDSL-like Lipase/Acylhydrolase family CYG48_RS13865 PF00005 ABC transporter CYG48_RS13875 PF01027 Inhibitor of apoptosis-promoting Bax1 CYG48_RS13900 PF00694 Aconitase C-terminal domain CYG48_RS13900 PF00330 Aconitase family (aconitate hydratase) CYG48_RS13905 PF00005 ABC transporter CYG48_RS13910 PF03379 CcmB protein CYG48_RS13915 PF01578 Cytochrome C assembly protein CYG48_RS13920 PF04995 Heme exporter protein D (CcmD) CYG48_RS13925 PF08534 Redoxin CYG48_RS13930 PF10755 Protein of unknown function (DUF2585) CYG48_RS13935 PF04279 Intracellular septation protein A CYG48_RS13940 PF02881 SRP54-type protein, helical bundle domain CYG48_RS13940 PF00448 SRP54-type protein, GTPase domain CYG48_RS13945 PF04055 Radical SAM superfamily CYG48_RS13945 PF00919 Uncharacterized protein family UPF0004 CYG48_RS13950 PF01678 Diaminopimelate epimerase CYG48_RS13955 PF01126 Heme oxygenase CYG48_RS13960 PF12706 Beta-lactamase superfamily domain CYG48_RS13965 PF02978 Signal peptide binding domain CYG48_RS13965 PF02881 SRP54-type protein, helical bundle domain CYG48_RS13965 PF00448 SRP54-type protein, GTPase domain CYG48_RS13970 PF01817 Chorismate mutase type II CYG48_RS13970 PF02153 Prephenate dehydrogenase CYG48_RS13975 PF00886 Ribosomal protein S16 CYG48_RS13980 PF05239 PRC-barrel domain CYG48_RS13980 PF01782 RimM N-terminal domain CYG48_RS13985 PF01746 tRNA (Guanine-1)-methyltransferase CYG48_RS13995 PF01245 Ribosomal protein L19 CYG48_RS14005 PF00330 Aconitase family (aconitate hydratase) CYG48_RS14015 PF00486 Transcriptional regulatory protein, C terminal CYG48_RS14015 PF00072 Response regulator receiver domain CYG48_RS14030 PF03548 Outer membrane lipoprotein carrier protein LolA CYG48_RS14035 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CYG48_RS14035 PF09397 Ftsk gamma domain CYG48_RS14035 PF17854 FtsK alpha domain CYG48_RS14035 PF01580 FtsK/SpoIIIE family CYG48_RS14040 PF00909 Ammonium Transporter Family CYG48_RS14045 PF00543 Nitrogen regulatory protein P-II CYG48_RS14055 PF01494 FAD binding domain CYG48_RS14060 PF03966 Trm112p-like protein CYG48_RS14070 PF00085 Thioredoxin CYG48_RS14085 PF01263 Aldose 1-epimerase CYG48_RS14095 PF04204 Homoserine O-succinyltransferase CYG48_RS14100 PF02861 Clp amino terminal domain, pathogenicity island component CYG48_RS14100 PF07724 AAA domain (Cdc48 subfamily) CYG48_RS14100 PF17871 AAA lid domain CYG48_RS14100 PF00004 ATPase family associated with various cellular activities (AAA) CYG48_RS14100 PF10431 C-terminal, D2-small domain, of ClpB protein CYG48_RS14110 PF16326 ABC transporter C-terminal domain CYG48_RS14110 PF00005 ABC transporter CYG48_RS14125 PF01547 Bacterial extracellular solute-binding protein CYG48_RS14130 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS14135 PF00005 ABC transporter CYG48_RS14140 PF01435 Peptidase family M48 CYG48_RS14145 PF04545 Sigma-70, region 4 CYG48_RS14145 PF04542 Sigma-70 region 2 CYG48_RS14145 PF00140 Sigma-70 factor, region 1.2 CYG48_RS14150 PF02559 CarD-like/TRCF domain CYG48_RS14155 PF00037 4Fe-4S binding domain CYG48_RS14155 PF11953 Domain of unknown function (DUF3470) CYG48_RS14160 PF01479 S4 domain CYG48_RS14160 PF00163 Ribosomal protein S4/S9 N-terminal domain CYG48_RS14185 PF02803 Thiolase, C-terminal domain CYG48_RS14185 PF00108 Thiolase, N-terminal domain CYG48_RS14190 PF05233 PHB accumulation regulatory domain CYG48_RS14190 PF07879 PHB/PHA accumulation regulator DNA-binding domain CYG48_RS14195 PF01783 Ribosomal L32p protein family CYG48_RS14200 PF13417 Glutathione S-transferase, N-terminal domain CYG48_RS14200 PF00043 Glutathione S-transferase, C-terminal domain CYG48_RS14205 PF00912 Transglycosylase CYG48_RS14210 PF00348 Polyprenyl synthetase CYG48_RS14220 PF13488 Glycine zipper CYG48_RS14220 PF00691 OmpA family CYG48_RS14225 PF04551 GcpE protein CYG48_RS14230 PF07690 Major Facilitator Superfamily CYG48_RS14235 PF02436 Conserved carboxylase domain CYG48_RS14235 PF00289 Biotin carboxylase, N-terminal domain CYG48_RS14235 PF00682 HMGL-like CYG48_RS14235 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CYG48_RS14235 PF00364 Biotin-requiring enzyme CYG48_RS14235 PF02785 Biotin carboxylase C-terminal domain CYG48_RS14240 PF00072 Response regulator receiver domain CYG48_RS14240 PF00196 Bacterial regulatory proteins, luxR family CYG48_RS14245 PF00664 ABC transporter transmembrane region CYG48_RS14245 PF00005 ABC transporter CYG48_RS14250 PF10091 Putative glucoamylase CYG48_RS14250 PF06165 Glycosyltransferase family 36 CYG48_RS14250 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain CYG48_RS14255 PF00291 Pyridoxal-phosphate dependent enzyme CYG48_RS14265 PF13091 PLD-like domain CYG48_RS14265 PF13396 Phospholipase_D-nuclease N-terminal CYG48_RS14270 PF00202 Aminotransferase class-III CYG48_RS14275 PF01546 Peptidase family M20/M25/M40 CYG48_RS14280 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CYG48_RS14285 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS14290 PF12911 N-terminal TM domain of oligopeptide transport permease C CYG48_RS14290 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS14295 PF00005 ABC transporter CYG48_RS14295 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CYG48_RS14300 PF00005 ABC transporter CYG48_RS14300 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CYG48_RS14305 PF00912 Transglycosylase CYG48_RS14305 PF00905 Penicillin binding protein transpeptidase domain CYG48_RS14305 PF06832 Penicillin-Binding Protein C-terminus Family CYG48_RS14310 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain CYG48_RS14310 PF00207 Alpha-2-macroglobulin family CYG48_RS14310 PF07703 Alpha-2-macroglobulin bait region domain CYG48_RS14310 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain CYG48_RS14310 PF07678 A-macroglobulin TED domain CYG48_RS14310 PF01835 MG2 domain CYG48_RS14310 PF17962 Bacterial macroglobulin domain 6 CYG48_RS14310 PF11974 Bacterial alpha-2-macroglobulin MG3 domain CYG48_RS14310 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain CYG48_RS14320 PF00501 AMP-binding enzyme CYG48_RS14320 PF13193 AMP-binding enzyme C-terminal domain CYG48_RS14325 PF02803 Thiolase, C-terminal domain CYG48_RS14325 PF00108 Thiolase, N-terminal domain CYG48_RS14335 PF03480 Bacterial extracellular solute-binding protein, family 7 CYG48_RS14335 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CYG48_RS14340 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CYG48_RS14340 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CYG48_RS14360 PF02219 Methylenetetrahydrofolate reductase CYG48_RS14365 PF01571 Aminomethyltransferase folate-binding domain CYG48_RS14370 PF00392 Bacterial regulatory proteins, gntR family CYG48_RS14370 PF07729 FCD domain CYG48_RS14380 PF04303 PrpF protein CYG48_RS14385 PF03737 Aldolase/RraA CYG48_RS14390 PF02585 GlcNAc-PI de-N-acetylase CYG48_RS14395 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CYG48_RS14400 PF03741 Integral membrane protein TerC family CYG48_RS14410 PF00497 Bacterial extracellular solute-binding proteins, family 3 CYG48_RS14415 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS14420 PF04199 Putative cyclase CYG48_RS14425 PF01593 Flavin containing amine oxidoreductase CYG48_RS14430 PF01047 MarR family CYG48_RS14445 PF01494 FAD binding domain CYG48_RS14450 PF00106 short chain dehydrogenase CYG48_RS14455 PF00378 Enoyl-CoA hydratase/isomerase CYG48_RS14460 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CYG48_RS14460 PF02770 Acyl-CoA dehydrogenase, middle domain CYG48_RS14460 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CYG48_RS14470 PF01042 Endoribonuclease L-PSP CYG48_RS14475 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CYG48_RS14475 PF00378 Enoyl-CoA hydratase/isomerase CYG48_RS14475 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CYG48_RS14480 PF01546 Peptidase family M20/M25/M40 CYG48_RS14480 PF07687 Peptidase dimerisation domain CYG48_RS14485 PF01804 Penicillin amidase CYG48_RS14490 PF01261 Xylose isomerase-like TIM barrel CYG48_RS14495 PF13407 Periplasmic binding protein domain CYG48_RS14500 PF02653 Branched-chain amino acid transport system / permease component CYG48_RS14505 PF00005 ABC transporter CYG48_RS14515 PF08220 DeoR-like helix-turn-helix domain CYG48_RS14515 PF00455 DeoR C terminal sensor domain CYG48_RS14535 PF00266 Aminotransferase class-V CYG48_RS14540 PF03301 Tryptophan 2,3-dioxygenase CYG48_RS14590 PF00313 'Cold-shock' DNA-binding domain CYG48_RS14595 PF00486 Transcriptional regulatory protein, C terminal CYG48_RS14595 PF00072 Response regulator receiver domain CYG48_RS14600 PF06745 KaiC CYG48_RS14605 PF00011 Hsp20/alpha crystallin family CYG48_RS14615 PF00118 TCP-1/cpn60 chaperonin family CYG48_RS14620 PF00166 Chaperonin 10 Kd subunit CYG48_RS14655 PF01259 SAICAR synthetase CYG48_RS14660 PF00440 Bacterial regulatory proteins, tetR family CYG48_RS14660 PF08361 MAATS-type transcriptional repressor, C-terminal region CYG48_RS14665 PF00529 HlyD membrane-fusion protein of T1SS CYG48_RS14665 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CYG48_RS14670 PF00873 AcrB/AcrD/AcrF family CYG48_RS14675 PF02321 Outer membrane efflux protein CYG48_RS14680 PF08207 Elongation factor P (EF-P) KOW-like domain CYG48_RS14680 PF01132 Elongation factor P (EF-P) OB domain CYG48_RS14680 PF09285 Elongation factor P, C-terminal CYG48_RS14685 PF00152 tRNA synthetases class II (D, K and N) CYG48_RS14690 PF04055 Radical SAM superfamily CYG48_RS14690 PF12544 Lysine-2,3-aminomutase CYG48_RS14695 PF00150 Cellulase (glycosyl hydrolase family 5) CYG48_RS14700 PF00551 Formyl transferase CYG48_RS14715 PF03466 LysR substrate binding domain CYG48_RS14715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG48_RS14720 PF01266 FAD dependent oxidoreductase CYG48_RS14725 PF00171 Aldehyde dehydrogenase family CYG48_RS14730 PF03576 Peptidase family S58 CYG48_RS14745 PF00155 Aminotransferase class I and II CYG48_RS14750 PF03186 CobD/Cbib protein CYG48_RS14765 PF12399 Branched-chain amino acid ATP-binding cassette transporter CYG48_RS14765 PF00005 ABC transporter CYG48_RS14770 PF00005 ABC transporter CYG48_RS14780 PF00829 Ribosomal prokaryotic L21 protein CYG48_RS14785 PF01016 Ribosomal L27 protein CYG48_RS14790 PF13302 Acetyltransferase (GNAT) domain CYG48_RS14795 PF13302 Acetyltransferase (GNAT) domain CYG48_RS14800 PF01018 GTP1/OBG CYG48_RS14800 PF01926 50S ribosome-binding GTPase CYG48_RS14805 PF01472 PUA domain CYG48_RS14805 PF00696 Amino acid kinase family CYG48_RS14810 PF00171 Aldehyde dehydrogenase family CYG48_RS14815 PF01467 Cytidylyltransferase-like CYG48_RS14825 PF02590 Predicted SPOUT methyltransferase CYG48_RS14835 PF03572 Peptidase family S41 CYG48_RS14835 PF13180 PDZ domain CYG48_RS14845 PF00293 NUDIX domain CYG48_RS14850 PF00210 Ferritin-like domain CYG48_RS14860 PF14579 Helix-hairpin-helix motif CYG48_RS14860 PF07733 Bacterial DNA polymerase III alpha NTPase domain CYG48_RS14860 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CYG48_RS14860 PF01336 OB-fold nucleic acid binding domain CYG48_RS14860 PF02811 PHP domain CYG48_RS14880 PF03328 HpcH/HpaI aldolase/citrate lyase family CYG48_RS14890 PF00694 Aconitase C-terminal domain CYG48_RS14895 PF01042 Endoribonuclease L-PSP CYG48_RS14900 PF00180 Isocitrate/isopropylmalate dehydrogenase CYG48_RS14905 PF01569 PAP2 superfamily CYG48_RS14910 PF01118 Semialdehyde dehydrogenase, NAD binding domain CYG48_RS14910 PF02774 Semialdehyde dehydrogenase, dimerisation domain CYG48_RS14920 PF00484 Carbonic anhydrase CYG48_RS14925 PF08543 Phosphomethylpyrimidine kinase CYG48_RS14930 PF05088 Bacterial NAD-glutamate dehydrogenase CYG48_RS14935 PF11700 Vacuole effluxer Atg22 like CYG48_RS14940 PF02142 MGS-like domain CYG48_RS14940 PF01808 AICARFT/IMPCHase bienzyme CYG48_RS14950 PF01189 16S rRNA methyltransferase RsmB/F CYG48_RS14950 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF CYG48_RS14950 PF01029 NusB family CYG48_RS14955 PF01435 Peptidase family M48 CYG48_RS14970 PF13193 AMP-binding enzyme C-terminal domain CYG48_RS14970 PF16177 Acetyl-coenzyme A synthetase N-terminus CYG48_RS14970 PF00501 AMP-binding enzyme CYG48_RS14980 PF00501 AMP-binding enzyme CYG48_RS14980 PF16177 Acetyl-coenzyme A synthetase N-terminus CYG48_RS14980 PF13193 AMP-binding enzyme C-terminal domain CYG48_RS14985 PF01168 Alanine racemase, N-terminal domain CYG48_RS14990 PF00133 tRNA synthetases class I (I, L, M and V) CYG48_RS14990 PF13603 Leucyl-tRNA synthetase, Domain 2 CYG48_RS14990 PF08264 Anticodon-binding domain of tRNA CYG48_RS15005 PF17762 HTH domain found in ParB protein CYG48_RS15005 PF02195 ParB-like nuclease domain CYG48_RS15010 PF13614 AAA domain CYG48_RS15015 PF02527 rRNA small subunit methyltransferase G CYG48_RS15020 PF13932 GidA associated domain CYG48_RS15020 PF01134 Glucose inhibited division protein A CYG48_RS15025 PF10396 GTP-binding protein TrmE N-terminus CYG48_RS15025 PF01926 50S ribosome-binding GTPase CYG48_RS15025 PF12631 MnmE helical domain CYG48_RS15030 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CYG48_RS15030 PF07498 Rho termination factor, N-terminal domain CYG48_RS15030 PF07497 Rho termination factor, RNA-binding domain CYG48_RS15035 PF03653 Uncharacterised protein family (UPF0093) CYG48_RS15040 PF01208 Uroporphyrinogen decarboxylase (URO-D) CYG48_RS15045 PF03618 Kinase/pyrophosphorylase CYG48_RS15050 PF02545 Maf-like protein CYG48_RS15055 PF08501 Shikimate dehydrogenase substrate binding domain CYG48_RS15055 PF01488 Shikimate / quinate 5-dehydrogenase CYG48_RS15055 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CYG48_RS15060 PF01121 Dephospho-CoA kinase CYG48_RS15065 PF00929 Exonuclease CYG48_RS15070 PF02556 Preprotein translocase subunit SecB CYG48_RS15075 PF04186 FxsA cytoplasmic membrane protein CYG48_RS15100 PF00204 DNA gyrase B CYG48_RS15100 PF00986 DNA gyrase B subunit, carboxyl terminus CYG48_RS15100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG48_RS15100 PF01751 Toprim domain CYG48_RS15110 PF01557 Fumarylacetoacetate (FAA) hydrolase family CYG48_RS15130 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CYG48_RS15135 PF00291 Pyridoxal-phosphate dependent enzyme CYG48_RS15140 PF00290 Tryptophan synthase alpha chain CYG48_RS15145 PF01039 Carboxyl transferase domain CYG48_RS15150 PF02875 Mur ligase family, glutamate ligase domain CYG48_RS15150 PF08245 Mur ligase middle domain CYG48_RS15155 PF00085 Thioredoxin CYG48_RS15160 PF00580 UvrD/REP helicase N-terminal domain CYG48_RS15160 PF13361 UvrD-like helicase C-terminal domain CYG48_RS15160 PF12705 PD-(D/E)XK nuclease superfamily CYG48_RS15170 PF12804 MobA-like NTP transferase domain CYG48_RS15175 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CYG48_RS15180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG48_RS15180 PF00512 His Kinase A (phospho-acceptor) domain CYG48_RS15185 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CYG48_RS15185 PF05221 S-adenosyl-L-homocysteine hydrolase CYG48_RS15190 PF00381 PTS HPr component phosphorylation site CYG48_RS15195 PF03610 PTS system fructose IIA component CYG48_RS15195 PF03830 PTS system sorbose subfamily IIB component CYG48_RS15205 PF00512 His Kinase A (phospho-acceptor) domain CYG48_RS15205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG48_RS15205 PF13755 Sensor N-terminal transmembrane domain CYG48_RS15205 PF13756 Stimulus-sensing domain CYG48_RS15205 PF00672 HAMP domain CYG48_RS15210 PF00486 Transcriptional regulatory protein, C terminal CYG48_RS15210 PF00072 Response regulator receiver domain CYG48_RS15215 PF01293 Phosphoenolpyruvate carboxykinase CYG48_RS15220 PF00472 RF-1 domain CYG48_RS15225 PF13532 2OG-Fe(II) oxygenase superfamily CYG48_RS15230 PF00485 Phosphoribulokinase / Uridine kinase family CYG48_RS15235 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CYG48_RS15240 PF00977 Histidine biosynthesis protein CYG48_RS15245 PF00977 Histidine biosynthesis protein CYG48_RS15250 PF00117 Glutamine amidotransferase class-I CYG48_RS15260 PF00475 Imidazoleglycerol-phosphate dehydratase CYG48_RS15265 PF00227 Proteasome subunit CYG48_RS15270 PF01636 Phosphotransferase enzyme family CYG48_RS15275 PF10431 C-terminal, D2-small domain, of ClpB protein CYG48_RS15275 PF00004 ATPase family associated with various cellular activities (AAA) CYG48_RS15275 PF07724 AAA domain (Cdc48 subfamily) CYG48_RS15285 PF00067 Cytochrome P450 CYG48_RS15290 PF05378 Hydantoinase/oxoprolinase N-terminal region CYG48_RS15290 PF01968 Hydantoinase/oxoprolinase CYG48_RS15295 PF01274 Malate synthase CYG48_RS15310 PF00072 Response regulator receiver domain CYG48_RS15315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG48_RS15315 PF00512 His Kinase A (phospho-acceptor) domain CYG48_RS15320 PF00270 DEAD/DEAH box helicase CYG48_RS15320 PF04408 Helicase associated domain (HA2) CYG48_RS15320 PF08482 ATP-dependent helicase C-terminal CYG48_RS15320 PF00271 Helicase conserved C-terminal domain CYG48_RS15325 PF02423 Ornithine cyclodeaminase/mu-crystallin family CYG48_RS15365 PF00465 Iron-containing alcohol dehydrogenase CYG48_RS15370 PF01039 Carboxyl transferase domain CYG48_RS15380 PF02785 Biotin carboxylase C-terminal domain CYG48_RS15380 PF00364 Biotin-requiring enzyme CYG48_RS15380 PF00289 Biotin carboxylase, N-terminal domain CYG48_RS15380 PF18140 Propionyl-coenzyme A carboxylase BT domain CYG48_RS15380 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CYG48_RS15385 PF01642 Methylmalonyl-CoA mutase CYG48_RS15385 PF02310 B12 binding domain CYG48_RS15395 PF01047 MarR family CYG48_RS15400 PF00378 Enoyl-CoA hydratase/isomerase CYG48_RS15405 PF00501 AMP-binding enzyme CYG48_RS15405 PF07993 Male sterility protein CYG48_RS15405 PF00550 Phosphopantetheine attachment site CYG48_RS15410 PF00106 short chain dehydrogenase CYG48_RS15415 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CYG48_RS15415 PF12806 Acetyl-CoA dehydrogenase C-terminal like CYG48_RS15415 PF02770 Acyl-CoA dehydrogenase, middle domain CYG48_RS15415 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CYG48_RS15420 PF13614 AAA domain CYG48_RS15425 PF00072 Response regulator receiver domain CYG48_RS15425 PF01339 CheB methylesterase CYG48_RS15430 PF01739 CheR methyltransferase, SAM binding domain CYG48_RS15430 PF03705 CheR methyltransferase, all-alpha domain CYG48_RS15435 PF01584 CheW-like domain CYG48_RS15440 PF00672 HAMP domain CYG48_RS15440 PF02203 Tar ligand binding domain homologue CYG48_RS15440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CYG48_RS15445 PF01584 CheW-like domain CYG48_RS15450 PF01627 Hpt domain CYG48_RS15450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG48_RS15450 PF09078 CheY binding CYG48_RS15450 PF02895 Signal transducing histidine kinase, homodimeric domain CYG48_RS15450 PF01584 CheW-like domain CYG48_RS15455 PF00072 Response regulator receiver domain CYG48_RS15475 PF02033 Ribosome-binding factor A CYG48_RS15480 PF16198 tRNA pseudouridylate synthase B C-terminal domain CYG48_RS15480 PF09157 Pseudouridine synthase II TruB, C-terminal CYG48_RS15480 PF01509 TruB family pseudouridylate synthase (N terminal domain) CYG48_RS15485 PF00312 Ribosomal protein S15 CYG48_RS15490 PF00575 S1 RNA binding domain CYG48_RS15490 PF00013 KH domain CYG48_RS15490 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CYG48_RS15490 PF01138 3' exoribonuclease family, domain 1 CYG48_RS15490 PF03725 3' exoribonuclease family, domain 2 CYG48_RS15495 PF08468 Methyltransferase small domain N-terminal CYG48_RS15495 PF05175 Methyltransferase small domain CYG48_RS15505 PF00109 Beta-ketoacyl synthase, N-terminal domain CYG48_RS15505 PF02801 Beta-ketoacyl synthase, C-terminal domain CYG48_RS15510 PF07977 FabA-like domain CYG48_RS15520 PF03458 UPF0126 domain CYG48_RS15535 PF06912 Protein of unknown function (DUF1275) CYG48_RS15540 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYG48_RS15540 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CYG48_RS15550 PF05378 Hydantoinase/oxoprolinase N-terminal region CYG48_RS15550 PF01968 Hydantoinase/oxoprolinase CYG48_RS15560 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CYG48_RS15575 PF13193 AMP-binding enzyme C-terminal domain CYG48_RS15575 PF00501 AMP-binding enzyme CYG48_RS15585 PF02653 Branched-chain amino acid transport system / permease component CYG48_RS15590 PF11862 Domain of unknown function (DUF3382) CYG48_RS15590 PF02653 Branched-chain amino acid transport system / permease component CYG48_RS15595 PF00005 ABC transporter CYG48_RS15600 PF00005 ABC transporter CYG48_RS15605 PF12802 MarR family CYG48_RS15610 PF04960 Glutaminase CYG48_RS15615 PF01970 Tripartite tricarboxylate transporter TctA family CYG48_RS15640 PF00072 Response regulator receiver domain CYG48_RS15640 PF00486 Transcriptional regulatory protein, C terminal CYG48_RS15645 PF00672 HAMP domain CYG48_RS15645 PF00512 His Kinase A (phospho-acceptor) domain CYG48_RS15645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG48_RS15650 PF01979 Amidohydrolase family CYG48_RS15655 PF01380 SIS domain CYG48_RS15660 PF07702 UTRA domain CYG48_RS15660 PF00392 Bacterial regulatory proteins, gntR family CYG48_RS15665 PF01869 BadF/BadG/BcrA/BcrD ATPase family CYG48_RS15670 PF01380 SIS domain CYG48_RS15680 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS15685 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS15690 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CYG48_RS15690 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CYG48_RS15695 PF00005 ABC transporter CYG48_RS15695 PF08402 TOBE domain CYG48_RS15720 PF02224 Cytidylate kinase CYG48_RS15725 PF00575 S1 RNA binding domain CYG48_RS15745 PF02615 Malate/L-lactate dehydrogenase CYG48_RS15755 PF02472 Biopolymer transport protein ExbD/TolR CYG48_RS15760 PF01618 MotA/TolQ/ExbB proton channel family CYG48_RS15770 PF11987 Translation-initiation factor 2 CYG48_RS15770 PF00009 Elongation factor Tu GTP binding domain CYG48_RS15770 PF04760 Translation initiation factor IF-2, N-terminal region CYG48_RS15770 PF08364 Bacterial translation initiation factor IF-2 associated region CYG48_RS15770 PF03144 Elongation factor Tu domain 2 CYG48_RS15780 PF13184 NusA-like KH domain CYG48_RS15780 PF00575 S1 RNA binding domain CYG48_RS15780 PF08529 NusA N-terminal domain CYG48_RS15785 PF17384 RimP C-terminal SH3 domain CYG48_RS15785 PF02576 RimP N-terminal domain CYG48_RS15800 PF13406 Transglycosylase SLT domain CYG48_RS15805 PF02132 RecR protein CYG48_RS15805 PF13662 Toprim domain CYG48_RS15815 PF01810 LysE type translocator CYG48_RS15820 PF00440 Bacterial regulatory proteins, tetR family CYG48_RS15830 PF02575 YbaB/EbfC DNA-binding family CYG48_RS15835 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding CYG48_RS15835 PF12170 DNA polymerase III tau subunit V interacting with alpha CYG48_RS15835 PF12169 DNA polymerase III subunits gamma and tau domain III CYG48_RS15850 PF09297 NADH pyrophosphatase zinc ribbon domain CYG48_RS15850 PF00293 NUDIX domain CYG48_RS15855 PF00800 Prephenate dehydratase CYG48_RS15855 PF01817 Chorismate mutase type II CYG48_RS15860 PF02348 Cytidylyltransferase CYG48_RS15865 PF00034 Cytochrome c CYG48_RS15875 PF00294 pfkB family carbohydrate kinase CYG48_RS15885 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CYG48_RS15885 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CYG48_RS15890 PF00583 Acetyltransferase (GNAT) family CYG48_RS15895 PF00581 Rhodanese-like domain CYG48_RS15895 PF00899 ThiF family CYG48_RS15900 PF02463 RecF/RecN/SMC N terminal domain CYG48_RS15905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CYG48_RS15905 PF00672 HAMP domain CYG48_RS15910 PF04102 SlyX CYG48_RS15915 PF00684 DnaJ central domain CYG48_RS15915 PF00226 DnaJ domain CYG48_RS15915 PF01556 DnaJ C terminal domain CYG48_RS15920 PF00012 Hsp70 protein CYG48_RS15925 PF00905 Penicillin binding protein transpeptidase domain CYG48_RS15925 PF00912 Transglycosylase CYG48_RS15960 PF04073 Aminoacyl-tRNA editing domain CYG48_RS15965 PF00313 'Cold-shock' DNA-binding domain CYG48_RS15970 PF07687 Peptidase dimerisation domain CYG48_RS15970 PF01546 Peptidase family M20/M25/M40 CYG48_RS15980 PF01612 3'-5' exonuclease CYG48_RS15980 PF00476 DNA polymerase family A CYG48_RS15980 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CYG48_RS15980 PF01367 5'-3' exonuclease, C-terminal SAM fold CYG48_RS15990 PF00625 Guanylate kinase CYG48_RS15995 PF07969 Amidohydrolase family CYG48_RS16000 PF06299 Protein of unknown function (DUF1045) CYG48_RS16005 PF00300 Histidine phosphatase superfamily (branch 1) CYG48_RS16010 PF05173 Dihydrodipicolinate reductase, C-terminus CYG48_RS16010 PF01113 Dihydrodipicolinate reductase, N-terminus CYG48_RS16015 PF02685 Glucokinase CYG48_RS16020 PF02142 MGS-like domain CYG48_RS16025 PF03411 Penicillin-insensitive murein endopeptidase CYG48_RS16030 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CYG48_RS16035 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS16040 PF12911 N-terminal TM domain of oligopeptide transport permease C CYG48_RS16040 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS16045 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CYG48_RS16045 PF00005 ABC transporter CYG48_RS16050 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CYG48_RS16060 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CYG48_RS16060 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CYG48_RS16075 PF16363 GDP-mannose 4,6 dehydratase CYG48_RS16095 PF00437 Type II/IV secretion system protein CYG48_RS16110 PF13629 Pilus formation protein N terminal region CYG48_RS16110 PF00263 Bacterial type II and III secretion system protein CYG48_RS16110 PF04972 BON domain CYG48_RS16145 PF01676 Metalloenzyme superfamily CYG48_RS16150 PF00962 Adenosine/AMP deaminase CYG48_RS16165 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CYG48_RS16165 PF00591 Glycosyl transferase family, a/b domain CYG48_RS16165 PF02885 Glycosyl transferase family, helical bundle domain CYG48_RS16170 PF01791 DeoC/LacD family aldolase CYG48_RS16175 PF01048 Phosphorylase superfamily CYG48_RS16180 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CYG48_RS16185 PF02653 Branched-chain amino acid transport system / permease component CYG48_RS16190 PF02653 Branched-chain amino acid transport system / permease component CYG48_RS16195 PF00005 ABC transporter CYG48_RS16200 PF02608 ABC transporter substrate-binding protein PnrA-like CYG48_RS16220 PF02789 Cytosol aminopeptidase family, N-terminal domain CYG48_RS16220 PF00883 Cytosol aminopeptidase family, catalytic domain CYG48_RS16230 PF00877 NlpC/P60 family CYG48_RS16240 PF06421 GTP-binding protein LepA C-terminus CYG48_RS16240 PF03144 Elongation factor Tu domain 2 CYG48_RS16240 PF00009 Elongation factor Tu GTP binding domain CYG48_RS16240 PF00679 Elongation factor G C-terminus CYG48_RS16245 PF07690 Major Facilitator Superfamily CYG48_RS16265 PF07690 Major Facilitator Superfamily CYG48_RS16270 PF00440 Bacterial regulatory proteins, tetR family CYG48_RS16285 PF01165 Ribosomal protein S21 CYG48_RS16295 PF00313 'Cold-shock' DNA-binding domain CYG48_RS16305 PF03480 Bacterial extracellular solute-binding protein, family 7 CYG48_RS16310 PF03480 Bacterial extracellular solute-binding protein, family 7 CYG48_RS16320 PF12282 Signal transduction histidine kinase CYG48_RS16320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG48_RS16320 PF07568 Histidine kinase CYG48_RS16335 PF05198 Translation initiation factor IF-3, N-terminal domain CYG48_RS16335 PF00707 Translation initiation factor IF-3, C-terminal domain CYG48_RS16340 PF01632 Ribosomal protein L35 CYG48_RS16345 PF00453 Ribosomal protein L20 CYG48_RS16350 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CYG48_RS16350 PF01409 tRNA synthetases class II core domain (F) CYG48_RS16355 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CYG48_RS16355 PF03483 B3/4 domain CYG48_RS16355 PF03484 tRNA synthetase B5 domain CYG48_RS16355 PF03147 Ferredoxin-fold anticodon binding domain CYG48_RS16355 PF01588 Putative tRNA binding domain CYG48_RS16370 PF00248 Aldo/keto reductase family CYG48_RS16375 PF00248 Aldo/keto reductase family CYG48_RS16380 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CYG48_RS16380 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CYG48_RS16390 PF03960 ArsC family CYG48_RS16395 PF04073 Aminoacyl-tRNA editing domain CYG48_RS16405 PF02073 Thermophilic metalloprotease (M29) CYG48_RS16410 PF13742 OB-fold nucleic acid binding domain CYG48_RS16410 PF02601 Exonuclease VII, large subunit CYG48_RS16420 PF00958 GMP synthase C terminal domain CYG48_RS16420 PF00117 Glutamine amidotransferase class-I CYG48_RS16435 PF03073 TspO/MBR family CYG48_RS16440 PF01029 NusB family CYG48_RS16440 PF01189 16S rRNA methyltransferase RsmB/F CYG48_RS16445 PF03330 Lytic transglycolase CYG48_RS16455 PF08331 Domain of unknown function (DUF1730) CYG48_RS16460 PF13417 Glutathione S-transferase, N-terminal domain CYG48_RS16460 PF00043 Glutathione S-transferase, C-terminal domain CYG48_RS16465 PF02673 Bacitracin resistance protein BacA CYG48_RS16485 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CYG48_RS16495 PF13649 Methyltransferase domain CYG48_RS16500 PF02768 DNA polymerase III beta subunit, C-terminal domain CYG48_RS16500 PF02767 DNA polymerase III beta subunit, central domain CYG48_RS16500 PF00712 DNA polymerase III beta subunit, N-terminal domain CYG48_RS16505 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CYG48_RS16510 PF02021 Uncharacterised protein family UPF0102 CYG48_RS16515 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CYG48_RS16515 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CYG48_RS16520 PF01078 Magnesium chelatase, subunit ChlI CYG48_RS16520 PF13335 Magnesium chelatase, subunit ChlI C-terminal CYG48_RS16525 PF00291 Pyridoxal-phosphate dependent enzyme CYG48_RS16530 PF00692 dUTPase CYG48_RS16535 PF03144 Elongation factor Tu domain 2 CYG48_RS16535 PF00009 Elongation factor Tu GTP binding domain CYG48_RS16535 PF16658 Class II release factor RF3, C-terminal domain CYG48_RS16540 PF01205 Uncharacterized protein family UPF0029 CYG48_RS16545 PF00291 Pyridoxal-phosphate dependent enzyme CYG48_RS16545 PF13291 ACT domain CYG48_RS16550 PF00982 Glycosyltransferase family 20 CYG48_RS16555 PF02358 Trehalose-phosphatase CYG48_RS16565 PF04127 DNA / pantothenate metabolism flavoprotein CYG48_RS16565 PF02441 Flavoprotein CYG48_RS16570 PF07690 Major Facilitator Superfamily CYG48_RS16585 PF03109 ABC1 family CYG48_RS16590 PF01209 ubiE/COQ5 methyltransferase family CYG48_RS16595 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CYG48_RS16595 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CYG48_RS16595 PF06827 Zinc finger found in FPG and IleRS CYG48_RS16600 PF00378 Enoyl-CoA hydratase/isomerase CYG48_RS16605 PF01649 Ribosomal protein S20 CYG48_RS16625 PF04205 FMN-binding domain CYG48_RS16625 PF03358 NADPH-dependent FMN reductase CYG48_RS16625 PF00890 FAD binding domain CYG48_RS16635 PF00005 ABC transporter CYG48_RS16640 PF12399 Branched-chain amino acid ATP-binding cassette transporter CYG48_RS16640 PF00005 ABC transporter CYG48_RS16645 PF11862 Domain of unknown function (DUF3382) CYG48_RS16645 PF02653 Branched-chain amino acid transport system / permease component CYG48_RS16650 PF02653 Branched-chain amino acid transport system / permease component CYG48_RS16660 PF00694 Aconitase C-terminal domain CYG48_RS16665 PF00330 Aconitase family (aconitate hydratase) CYG48_RS16690 PF13533 Biotin-lipoyl like CYG48_RS16700 PF01047 MarR family CYG48_RS16710 PF01739 CheR methyltransferase, SAM binding domain CYG48_RS16710 PF03705 CheR methyltransferase, all-alpha domain CYG48_RS16715 PF01584 CheW-like domain CYG48_RS16720 PF00672 HAMP domain CYG48_RS16720 PF02203 Tar ligand binding domain homologue CYG48_RS16720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CYG48_RS16725 PF01584 CheW-like domain CYG48_RS16730 PF09078 CheY binding CYG48_RS16730 PF01584 CheW-like domain CYG48_RS16730 PF02895 Signal transducing histidine kinase, homodimeric domain CYG48_RS16730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG48_RS16730 PF01627 Hpt domain CYG48_RS16735 PF00072 Response regulator receiver domain CYG48_RS16745 PF00072 Response regulator receiver domain CYG48_RS16750 PF00356 Bacterial regulatory proteins, lacI family CYG48_RS16755 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS16760 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS16770 PF01134 Glucose inhibited division protein A CYG48_RS16770 PF13932 GidA associated domain CYG48_RS16775 PF08402 TOBE domain CYG48_RS16775 PF00005 ABC transporter CYG48_RS16780 PF00106 short chain dehydrogenase CYG48_RS16785 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CYG48_RS16785 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CYG48_RS16790 PF00929 Exonuclease CYG48_RS16800 PF00571 CBS domain CYG48_RS16800 PF00005 ABC transporter CYG48_RS16805 PF00474 Sodium:solute symporter family CYG48_RS16815 PF01758 Sodium Bile acid symporter family CYG48_RS16820 PF01235 Sodium:alanine symporter family CYG48_RS16830 PF01757 Acyltransferase family CYG48_RS16840 PF02563 Polysaccharide biosynthesis/export protein CYG48_RS16845 PF02397 Bacterial sugar transferase CYG48_RS16850 PF11089 Exopolysaccharide production repressor CYG48_RS16855 PF00535 Glycosyl transferase family 2 CYG48_RS16860 PF04230 Polysaccharide pyruvyl transferase CYG48_RS16865 PF00535 Glycosyl transferase family 2 CYG48_RS16870 PF01943 Polysaccharide biosynthesis protein CYG48_RS16875 PF01757 Acyltransferase family CYG48_RS16880 PF00722 Glycosyl hydrolases family 16 CYG48_RS16890 PF00535 Glycosyl transferase family 2 CYG48_RS16895 PF00535 Glycosyl transferase family 2 CYG48_RS16900 PF13807 G-rich domain on putative tyrosine kinase CYG48_RS16900 PF02706 Chain length determinant protein CYG48_RS16900 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CYG48_RS16905 PF00672 HAMP domain CYG48_RS16905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CYG48_RS16945 PF01933 Uncharacterised protein family UPF0052 CYG48_RS16950 PF00591 Glycosyl transferase family, a/b domain CYG48_RS16950 PF02885 Glycosyl transferase family, helical bundle domain CYG48_RS16960 PF01032 FecCD transport family CYG48_RS16965 PF01032 FecCD transport family CYG48_RS16970 PF00005 ABC transporter CYG48_RS16980 PF00593 TonB dependent receptor CYG48_RS16980 PF07715 TonB-dependent Receptor Plug Domain CYG48_RS16990 PF03576 Peptidase family S58 CYG48_RS16995 PF00005 ABC transporter CYG48_RS17000 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS17005 PF00497 Bacterial extracellular solute-binding proteins, family 3 CYG48_RS17010 PF01063 Amino-transferase class IV CYG48_RS17015 PF03466 LysR substrate binding domain CYG48_RS17015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG48_RS17055 PF00440 Bacterial regulatory proteins, tetR family CYG48_RS17085 PF00465 Iron-containing alcohol dehydrogenase CYG48_RS17090 PF00171 Aldehyde dehydrogenase family CYG48_RS17095 PF07859 alpha/beta hydrolase fold CYG48_RS17105 PF00106 short chain dehydrogenase CYG48_RS17115 PF03466 LysR substrate binding domain CYG48_RS17115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG48_RS17120 PF01042 Endoribonuclease L-PSP CYG48_RS17125 PF17757 UvrB interaction domain CYG48_RS17125 PF02559 CarD-like/TRCF domain CYG48_RS17125 PF00271 Helicase conserved C-terminal domain CYG48_RS17125 PF00270 DEAD/DEAH box helicase CYG48_RS17125 PF03461 TRCF domain CYG48_RS17130 PF01232 Mannitol dehydrogenase Rossmann domain CYG48_RS17130 PF08125 Mannitol dehydrogenase C-terminal domain CYG48_RS17135 PF05336 L-rhamnose mutarotase CYG48_RS17145 PF00248 Aldo/keto reductase family CYG48_RS17155 PF02653 Branched-chain amino acid transport system / permease component CYG48_RS17160 PF00005 ABC transporter CYG48_RS17165 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CYG48_RS17165 PF00356 Bacterial regulatory proteins, lacI family CYG48_RS17175 PF13407 Periplasmic binding protein domain CYG48_RS17180 PF00005 ABC transporter CYG48_RS17185 PF02653 Branched-chain amino acid transport system / permease component CYG48_RS17190 PF02653 Branched-chain amino acid transport system / permease component CYG48_RS17195 PF17912 MalK OB fold domain CYG48_RS17195 PF00005 ABC transporter CYG48_RS17200 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS17205 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS17210 PF01547 Bacterial extracellular solute-binding protein CYG48_RS17215 PF06964 Alpha-L-arabinofuranosidase C-terminal domain CYG48_RS17225 PF13378 Enolase C-terminal domain-like CYG48_RS17225 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CYG48_RS17230 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CYG48_RS17240 PF03480 Bacterial extracellular solute-binding protein, family 7 CYG48_RS17250 PF00266 Aminotransferase class-V CYG48_RS17255 PF00005 ABC transporter CYG48_RS17260 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS17265 PF00497 Bacterial extracellular solute-binding proteins, family 3 CYG48_RS17270 PF00392 Bacterial regulatory proteins, gntR family CYG48_RS17270 PF07729 FCD domain CYG48_RS17275 PF01979 Amidohydrolase family CYG48_RS17280 PF01037 Lrp/AsnC ligand binding domain CYG48_RS17290 PF02203 Tar ligand binding domain homologue CYG48_RS17290 PF00672 HAMP domain CYG48_RS17290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CYG48_RS17300 PF00005 ABC transporter CYG48_RS17300 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CYG48_RS17305 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CYG48_RS17305 PF00005 ABC transporter CYG48_RS17315 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS17315 PF12911 N-terminal TM domain of oligopeptide transport permease C CYG48_RS17320 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS17325 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CYG48_RS17330 PF01522 Polysaccharide deacetylase CYG48_RS17350 PF00034 Cytochrome c CYG48_RS17350 PF02790 Cytochrome C oxidase subunit II, transmembrane domain CYG48_RS17350 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CYG48_RS17355 PF00115 Cytochrome C and Quinol oxidase polypeptide I CYG48_RS17365 PF01546 Peptidase family M20/M25/M40 CYG48_RS17365 PF07687 Peptidase dimerisation domain CYG48_RS17370 PF00005 ABC transporter CYG48_RS17375 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS17390 PF00155 Aminotransferase class I and II CYG48_RS17390 PF00392 Bacterial regulatory proteins, gntR family CYG48_RS17395 PF17912 MalK OB fold domain CYG48_RS17395 PF00005 ABC transporter CYG48_RS17400 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS17405 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS17415 PF01053 Cys/Met metabolism PLP-dependent enzyme CYG48_RS17420 PF07729 FCD domain CYG48_RS17420 PF00392 Bacterial regulatory proteins, gntR family CYG48_RS17425 PF16653 Saccharopine dehydrogenase C-terminal domain CYG48_RS17425 PF03435 Saccharopine dehydrogenase NADP binding domain CYG48_RS17430 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CYG48_RS17440 PF03480 Bacterial extracellular solute-binding protein, family 7 CYG48_RS17450 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CYG48_RS17455 PF07687 Peptidase dimerisation domain CYG48_RS17455 PF01546 Peptidase family M20/M25/M40 CYG48_RS17460 PF03466 LysR substrate binding domain CYG48_RS17460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG48_RS17465 PF13439 Glycosyltransferase Family 4 CYG48_RS17465 PF00534 Glycosyl transferases group 1 CYG48_RS17475 PF07411 Domain of unknown function (DUF1508) CYG48_RS17480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG48_RS17480 PF00989 PAS fold CYG48_RS17480 PF16736 Single Cache-like CYG48_RS17480 PF00512 His Kinase A (phospho-acceptor) domain CYG48_RS17490 PF00072 Response regulator receiver domain CYG48_RS17490 PF00486 Transcriptional regulatory protein, C terminal CYG48_RS17495 PF06114 IrrE N-terminal-like domain CYG48_RS17495 PF01381 Helix-turn-helix CYG48_RS17495 PF09856 Predicted transcriptional regulator (DUF2083) CYG48_RS17505 PF02653 Branched-chain amino acid transport system / permease component CYG48_RS17510 PF02653 Branched-chain amino acid transport system / permease component CYG48_RS17515 PF12399 Branched-chain amino acid ATP-binding cassette transporter CYG48_RS17515 PF00005 ABC transporter CYG48_RS17520 PF00005 ABC transporter CYG48_RS17530 PF16197 Ketoacyl-synthetase C-terminal extension CYG48_RS17530 PF02801 Beta-ketoacyl synthase, C-terminal domain CYG48_RS17530 PF00109 Beta-ketoacyl synthase, N-terminal domain CYG48_RS17530 PF08659 KR domain CYG48_RS17530 PF08240 Alcohol dehydrogenase GroES-like domain CYG48_RS17530 PF14765 Polyketide synthase dehydratase CYG48_RS17530 PF00550 Phosphopantetheine attachment site CYG48_RS17530 PF00698 Acyl transferase domain CYG48_RS17535 PF03466 LysR substrate binding domain CYG48_RS17535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG48_RS17540 PF06441 Epoxide hydrolase N terminus CYG48_RS17545 PF02567 Phenazine biosynthesis-like protein CYG48_RS17550 PF03466 LysR substrate binding domain CYG48_RS17550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG48_RS17560 PF03358 NADPH-dependent FMN reductase CYG48_RS17590 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CYG48_RS17600 PF01266 FAD dependent oxidoreductase CYG48_RS17605 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYG48_RS17605 PF17806 Sarcosine oxidase A3 domain CYG48_RS17610 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CYG48_RS17610 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CYG48_RS17615 PF00455 DeoR C terminal sensor domain CYG48_RS17615 PF08220 DeoR-like helix-turn-helix domain CYG48_RS17620 PF02423 Ornithine cyclodeaminase/mu-crystallin family CYG48_RS17625 PF00132 Bacterial transferase hexapeptide (six repeats) CYG48_RS17630 PF01654 Cytochrome bd terminal oxidase subunit I CYG48_RS17635 PF02322 Cytochrome bd terminal oxidase subunit II CYG48_RS17650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CYG48_RS17650 PF00672 HAMP domain CYG48_RS17655 PF16868 NMT1-like family CYG48_RS17685 PF00171 Aldehyde dehydrogenase family CYG48_RS17690 PF13458 Periplasmic binding protein CYG48_RS17695 PF02653 Branched-chain amino acid transport system / permease component CYG48_RS17705 PF12399 Branched-chain amino acid ATP-binding cassette transporter CYG48_RS17705 PF00005 ABC transporter CYG48_RS17710 PF00005 ABC transporter CYG48_RS17715 PF00171 Aldehyde dehydrogenase family CYG48_RS17720 PF01145 SPFH domain / Band 7 family CYG48_RS17720 PF15975 Flotillin CYG48_RS17730 PF07930 D-aminopeptidase, domain B CYG48_RS17730 PF00144 Beta-lactamase CYG48_RS17735 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CYG48_RS17740 PF00005 ABC transporter CYG48_RS17740 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CYG48_RS17745 PF12911 N-terminal TM domain of oligopeptide transport permease C CYG48_RS17745 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS17750 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS17755 PF00561 alpha/beta hydrolase fold CYG48_RS17765 PF00561 alpha/beta hydrolase fold CYG48_RS17770 PF03707 Bacterial signalling protein N terminal repeat CYG48_RS17770 PF00563 EAL domain CYG48_RS17770 PF00990 Diguanylate cyclase, GGDEF domain CYG48_RS17785 PF09339 IclR helix-turn-helix domain CYG48_RS17785 PF01614 Bacterial transcriptional regulator CYG48_RS17795 PF00072 Response regulator receiver domain CYG48_RS17795 PF00196 Bacterial regulatory proteins, luxR family CYG48_RS17800 PF13579 Glycosyl transferase 4-like domain CYG48_RS17800 PF00534 Glycosyl transferases group 1 CYG48_RS17810 PF00698 Acyl transferase domain CYG48_RS17810 PF02801 Beta-ketoacyl synthase, C-terminal domain CYG48_RS17810 PF00109 Beta-ketoacyl synthase, N-terminal domain CYG48_RS17810 PF16197 Ketoacyl-synthetase C-terminal extension CYG48_RS17810 PF00550 Phosphopantetheine attachment site CYG48_RS17810 PF00668 Condensation domain CYG48_RS17815 PF13193 AMP-binding enzyme C-terminal domain CYG48_RS17815 PF00668 Condensation domain CYG48_RS17815 PF00501 AMP-binding enzyme CYG48_RS17815 PF00550 Phosphopantetheine attachment site CYG48_RS17835 PF00732 GMC oxidoreductase CYG48_RS17835 PF05199 GMC oxidoreductase CYG48_RS17840 PF02397 Bacterial sugar transferase CYG48_RS17845 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CYG48_RS17845 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CYG48_RS17855 PF13193 AMP-binding enzyme C-terminal domain CYG48_RS17855 PF00501 AMP-binding enzyme CYG48_RS17870 PF00534 Glycosyl transferases group 1 CYG48_RS17870 PF13439 Glycosyltransferase Family 4 CYG48_RS17875 PF02563 Polysaccharide biosynthesis/export protein CYG48_RS17900 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CYG48_RS17900 PF00005 ABC transporter CYG48_RS17905 PF00005 ABC transporter CYG48_RS17905 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CYG48_RS17910 PF00005 ABC transporter CYG48_RS17910 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CYG48_RS17915 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CYG48_RS17915 PF00005 ABC transporter CYG48_RS17920 PF00534 Glycosyl transferases group 1 CYG48_RS17920 PF13439 Glycosyltransferase Family 4 CYG48_RS17965 PF00535 Glycosyl transferase family 2 CYG48_RS17970 PF00534 Glycosyl transferases group 1 CYG48_RS17970 PF13439 Glycosyltransferase Family 4 CYG48_RS17980 PF00534 Glycosyl transferases group 1 CYG48_RS17980 PF13439 Glycosyltransferase Family 4 CYG48_RS17985 PF00529 HlyD membrane-fusion protein of T1SS CYG48_RS17985 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CYG48_RS17990 PF00005 ABC transporter CYG48_RS17990 PF00664 ABC transporter transmembrane region CYG48_RS18005 PF00196 Bacterial regulatory proteins, luxR family CYG48_RS18005 PF13185 GAF domain CYG48_RS18025 PF08241 Methyltransferase domain CYG48_RS18060 PF00462 Glutaredoxin CYG48_RS18065 PF07972 NrdI Flavodoxin like CYG48_RS18070 PF00317 Ribonucleotide reductase, all-alpha domain CYG48_RS18070 PF02867 Ribonucleotide reductase, barrel domain CYG48_RS18070 PF08343 Ribonucleotide reductase N-terminal CYG48_RS18075 PF00268 Ribonucleotide reductase, small chain CYG48_RS18085 PF03466 LysR substrate binding domain CYG48_RS18085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG48_RS18105 PF03466 LysR substrate binding domain CYG48_RS18105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG48_RS18125 PF00034 Cytochrome c CYG48_RS18125 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CYG48_RS18125 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CYG48_RS18150 PF00115 Cytochrome C and Quinol oxidase polypeptide I CYG48_RS18155 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CYG48_RS18155 PF02790 Cytochrome C oxidase subunit II, transmembrane domain CYG48_RS18165 PF00384 Molybdopterin oxidoreductase CYG48_RS18195 PF00156 Phosphoribosyl transferase domain CYG48_RS18195 PF05139 Erythromycin esterase CYG48_RS18200 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CYG48_RS18200 PF00205 Thiamine pyrophosphate enzyme, central domain CYG48_RS18200 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CYG48_RS18210 PF00106 short chain dehydrogenase CYG48_RS18225 PF00561 alpha/beta hydrolase fold CYG48_RS18235 PF00892 EamA-like transporter family CYG48_RS18270 PF00202 Aminotransferase class-III CYG48_RS18275 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CYG48_RS18275 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CYG48_RS18280 PF01042 Endoribonuclease L-PSP CYG48_RS18285 PF08402 TOBE domain CYG48_RS18285 PF00005 ABC transporter CYG48_RS18290 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS18295 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS18305 PF01244 Membrane dipeptidase (Peptidase family M19) CYG48_RS18330 PF13378 Enolase C-terminal domain-like CYG48_RS18330 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CYG48_RS18335 PF00701 Dihydrodipicolinate synthetase family CYG48_RS18340 PF07729 FCD domain CYG48_RS18340 PF00392 Bacterial regulatory proteins, gntR family CYG48_RS18345 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CYG48_RS18350 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS18355 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS18355 PF12911 N-terminal TM domain of oligopeptide transport permease C CYG48_RS18360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CYG48_RS18360 PF00005 ABC transporter CYG48_RS18365 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CYG48_RS18365 PF00005 ABC transporter CYG48_RS18370 PF13426 PAS domain CYG48_RS18370 PF07568 Histidine kinase CYG48_RS18370 PF13581 Histidine kinase-like ATPase domain CYG48_RS18375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG48_RS18375 PF13426 PAS domain CYG48_RS18375 PF00072 Response regulator receiver domain CYG48_RS18385 PF00990 Diguanylate cyclase, GGDEF domain CYG48_RS18390 PF13817 IS66 C-terminal element CYG48_RS18390 PF13007 Transposase C of IS166 homeodomain CYG48_RS18390 PF13005 zinc-finger binding domain of transposase IS66 CYG48_RS18390 PF03050 Transposase IS66 family CYG48_RS18395 PF05717 IS66 Orf2 like protein CYG48_RS18400 PF01527 Transposase CYG48_RS18415 PF00892 EamA-like transporter family CYG48_RS18435 PF07536 HWE histidine kinase CYG48_RS18435 PF13426 PAS domain CYG48_RS18435 PF13581 Histidine kinase-like ATPase domain CYG48_RS18440 PF01339 CheB methylesterase CYG48_RS18445 PF01739 CheR methyltransferase, SAM binding domain CYG48_RS18445 PF03705 CheR methyltransferase, all-alpha domain CYG48_RS18450 PF00072 Response regulator receiver domain CYG48_RS18450 PF00512 His Kinase A (phospho-acceptor) domain CYG48_RS18450 PF01627 Hpt domain CYG48_RS18450 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CYG48_RS18450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG48_RS18450 PF00672 HAMP domain CYG48_RS18455 PF01695 IstB-like ATP binding protein CYG48_RS18460 PF00665 Integrase core domain CYG48_RS18470 PF00672 HAMP domain CYG48_RS18470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CYG48_RS18480 PF08447 PAS fold CYG48_RS18480 PF00563 EAL domain CYG48_RS18480 PF08448 PAS fold CYG48_RS18480 PF00990 Diguanylate cyclase, GGDEF domain CYG48_RS18505 PF00672 HAMP domain CYG48_RS18505 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CYG48_RS18505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG48_RS18505 PF00072 Response regulator receiver domain CYG48_RS18505 PF00512 His Kinase A (phospho-acceptor) domain CYG48_RS18505 PF01627 Hpt domain CYG48_RS18510 PF00563 EAL domain CYG48_RS18510 PF13185 GAF domain CYG48_RS18510 PF00990 Diguanylate cyclase, GGDEF domain CYG48_RS18520 PF02308 MgtC family CYG48_RS18535 PF03471 Transporter associated domain CYG48_RS18535 PF03741 Integral membrane protein TerC family CYG48_RS18550 PF13276 HTH-like domain CYG48_RS18550 PF00665 Integrase core domain CYG48_RS18550 PF13333 Integrase core domain CYG48_RS18555 PF00665 Integrase core domain CYG48_RS18560 PF01695 IstB-like ATP binding protein CYG48_RS18570 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CYG48_RS18570 PF07685 CobB/CobQ-like glutamine amidotransferase domain CYG48_RS18575 PF12557 Cob(I)alamin adenosyltransferase N terminal CYG48_RS18575 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CYG48_RS18595 PF02492 CobW/HypB/UreG, nucleotide-binding domain CYG48_RS18595 PF07683 Cobalamin synthesis protein cobW C-terminal domain CYG48_RS18600 PF02514 CobN/Magnesium Chelatase CYG48_RS18605 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CYG48_RS18610 PF02570 Precorrin-8X methylmutase CYG48_RS18615 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CYG48_RS18620 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CYG48_RS18625 PF02571 Precorrin-6x reductase CbiJ/CobK CYG48_RS18630 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CYG48_RS18640 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CYG48_RS18645 PF01888 CbiD CYG48_RS18650 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CYG48_RS18655 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CYG48_RS18655 PF07685 CobB/CobQ-like glutamine amidotransferase domain CYG48_RS18660 PF02705 K+ potassium transporter CYG48_RS18665 PF04954 Siderophore-interacting protein CYG48_RS18665 PF08021 Siderophore-interacting FAD-binding domain CYG48_RS18670 PF07690 Major Facilitator Superfamily CYG48_RS18675 PF00593 TonB dependent receptor CYG48_RS18675 PF07715 TonB-dependent Receptor Plug Domain CYG48_RS18690 PF04221 RelB antitoxin CYG48_RS18705 PF13276 HTH-like domain CYG48_RS18705 PF13333 Integrase core domain CYG48_RS18705 PF00665 Integrase core domain CYG48_RS18710 PF01695 IstB-like ATP binding protein CYG48_RS18715 PF00665 Integrase core domain CYG48_RS18720 PF00905 Penicillin binding protein transpeptidase domain CYG48_RS18720 PF03717 Penicillin-binding Protein dimerisation domain CYG48_RS18730 PF03458 UPF0126 domain CYG48_RS18735 PF13091 PLD-like domain CYG48_RS18740 PF13091 PLD-like domain CYG48_RS18780 PF01370 NAD dependent epimerase/dehydratase family CYG48_RS18780 PF08338 Domain of unknown function (DUF1731) CYG48_RS18785 PF13419 Haloacid dehalogenase-like hydrolase CYG48_RS18790 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CYG48_RS18795 PF00005 ABC transporter CYG48_RS18795 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CYG48_RS18800 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CYG48_RS18800 PF00005 ABC transporter CYG48_RS18805 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS18810 PF12911 N-terminal TM domain of oligopeptide transport permease C CYG48_RS18810 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS18815 PF03009 Glycerophosphoryl diester phosphodiesterase family CYG48_RS18900 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CYG48_RS18900 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CYG48_RS18905 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CYG48_RS18910 PF00005 ABC transporter CYG48_RS18910 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CYG48_RS18915 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CYG48_RS18915 PF00005 ABC transporter CYG48_RS18920 PF12911 N-terminal TM domain of oligopeptide transport permease C CYG48_RS18920 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS18925 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS18930 PF03466 LysR substrate binding domain CYG48_RS18930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG48_RS18950 PF09339 IclR helix-turn-helix domain CYG48_RS18950 PF01614 Bacterial transcriptional regulator CYG48_RS18955 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CYG48_RS18965 PF03480 Bacterial extracellular solute-binding protein, family 7 CYG48_RS18975 PF03972 MmgE/PrpD family CYG48_RS19010 PF13378 Enolase C-terminal domain-like CYG48_RS19010 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CYG48_RS19030 PF01012 Electron transfer flavoprotein domain CYG48_RS19030 PF00766 Electron transfer flavoprotein FAD-binding domain CYG48_RS19035 PF01012 Electron transfer flavoprotein domain CYG48_RS19040 PF00378 Enoyl-CoA hydratase/isomerase CYG48_RS19050 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CYG48_RS19050 PF02770 Acyl-CoA dehydrogenase, middle domain CYG48_RS19050 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CYG48_RS19055 PF02515 CoA-transferase family III CYG48_RS19065 PF01070 FMN-dependent dehydrogenase CYG48_RS19070 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CYG48_RS19070 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CYG48_RS19070 PF01842 ACT domain CYG48_RS19085 PF03401 Tripartite tricarboxylate transporter family receptor CYG48_RS19095 PF01970 Tripartite tricarboxylate transporter TctA family CYG48_RS19100 PF07690 Major Facilitator Superfamily CYG48_RS19145 PF00199 Catalase CYG48_RS19145 PF06628 Catalase-related immune-responsive CYG48_RS19150 PF00892 EamA-like transporter family CYG48_RS19160 PF00440 Bacterial regulatory proteins, tetR family CYG48_RS19165 PF05853 beta-keto acid cleavage enzyme CYG48_RS19175 PF03401 Tripartite tricarboxylate transporter family receptor CYG48_RS19185 PF01970 Tripartite tricarboxylate transporter TctA family CYG48_RS19195 PF00171 Aldehyde dehydrogenase family CYG48_RS19205 PF03328 HpcH/HpaI aldolase/citrate lyase family CYG48_RS19210 PF00698 Acyl transferase domain CYG48_RS19210 PF00550 Phosphopantetheine attachment site CYG48_RS19210 PF00107 Zinc-binding dehydrogenase CYG48_RS19210 PF16197 Ketoacyl-synthetase C-terminal extension CYG48_RS19210 PF02801 Beta-ketoacyl synthase, C-terminal domain CYG48_RS19210 PF08659 KR domain CYG48_RS19210 PF08240 Alcohol dehydrogenase GroES-like domain CYG48_RS19210 PF00109 Beta-ketoacyl synthase, N-terminal domain CYG48_RS19210 PF14765 Polyketide synthase dehydratase CYG48_RS19230 PF02913 FAD linked oxidases, C-terminal domain CYG48_RS19230 PF01565 FAD binding domain CYG48_RS19235 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CYG48_RS19240 PF07687 Peptidase dimerisation domain CYG48_RS19240 PF01546 Peptidase family M20/M25/M40 CYG48_RS19245 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS19250 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS19255 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CYG48_RS19255 PF00005 ABC transporter CYG48_RS19260 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CYG48_RS19260 PF00005 ABC transporter CYG48_RS19265 PF00155 Aminotransferase class I and II CYG48_RS19270 PF07859 alpha/beta hydrolase fold CYG48_RS19285 PF02653 Branched-chain amino acid transport system / permease component CYG48_RS19290 PF00005 ABC transporter CYG48_RS19295 PF00005 ABC transporter CYG48_RS19295 PF12399 Branched-chain amino acid ATP-binding cassette transporter CYG48_RS19310 PF00701 Dihydrodipicolinate synthetase family CYG48_RS19320 PF01593 Flavin containing amine oxidoreductase CYG48_RS19335 PF00480 ROK family CYG48_RS19340 PF13407 Periplasmic binding protein domain CYG48_RS19345 PF02653 Branched-chain amino acid transport system / permease component CYG48_RS19350 PF00005 ABC transporter CYG48_RS19365 PF01220 Dehydroquinase class II CYG48_RS19370 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CYG48_RS19380 PF03480 Bacterial extracellular solute-binding protein, family 7 CYG48_RS19390 PF01261 Xylose isomerase-like TIM barrel CYG48_RS19390 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CYG48_RS19395 PF08501 Shikimate dehydrogenase substrate binding domain CYG48_RS19395 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CYG48_RS19420 PF10397 Adenylosuccinate lyase C-terminus CYG48_RS19420 PF00206 Lyase CYG48_RS19425 PF00775 Dioxygenase CYG48_RS19430 PF00775 Dioxygenase CYG48_RS19430 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal CYG48_RS19435 PF02627 Carboxymuconolactone decarboxylase family CYG48_RS19440 PF00561 alpha/beta hydrolase fold CYG48_RS19445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG48_RS19445 PF03466 LysR substrate binding domain CYG48_RS19450 PF13660 Domain of unknown function (DUF4147) CYG48_RS19450 PF05161 MOFRL family CYG48_RS19455 PF13180 PDZ domain CYG48_RS19470 PF11972 HTH DNA binding domain CYG48_RS19470 PF07756 Protein of unknown function (DUF1612) CYG48_RS19475 PF13614 AAA domain CYG48_RS19475 PF00376 MerR family regulatory protein CYG48_RS19480 PF02195 ParB-like nuclease domain CYG48_RS19480 PF07506 RepB plasmid partitioning protein CYG48_RS19485 PF03428 Replication protein C N-terminal domain CYG48_RS19485 PF11800 Replication protein C C-terminal region CYG48_RS19495 PF01068 ATP dependent DNA ligase domain CYG48_RS19495 PF13298 DNA polymerase Ligase (LigD) CYG48_RS19495 PF04679 ATP dependent DNA ligase C terminal region CYG48_RS19500 PF01068 ATP dependent DNA ligase domain CYG48_RS19500 PF13298 DNA polymerase Ligase (LigD) CYG48_RS19500 PF04679 ATP dependent DNA ligase C terminal region CYG48_RS19505 PF02735 Ku70/Ku80 beta-barrel domain CYG48_RS19510 PF02735 Ku70/Ku80 beta-barrel domain CYG48_RS19515 PF07702 UTRA domain CYG48_RS19515 PF00392 Bacterial regulatory proteins, gntR family CYG48_RS19520 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CYG48_RS19525 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS19530 PF12911 N-terminal TM domain of oligopeptide transport permease C CYG48_RS19530 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS19545 PF00005 ABC transporter CYG48_RS19545 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CYG48_RS19550 PF07976 Phenol hydroxylase, C-terminal dimerisation domain CYG48_RS19550 PF01494 FAD binding domain CYG48_RS19560 PF08402 TOBE domain CYG48_RS19560 PF00005 ABC transporter CYG48_RS19570 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS19575 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS19580 PF01565 FAD binding domain CYG48_RS19580 PF02913 FAD linked oxidases, C-terminal domain CYG48_RS19585 PF01156 Inosine-uridine preferring nucleoside hydrolase CYG48_RS19590 PF04227 Indigoidine synthase A like protein CYG48_RS19595 PF00294 pfkB family carbohydrate kinase CYG48_RS19600 PF05336 L-rhamnose mutarotase CYG48_RS19605 PF02653 Branched-chain amino acid transport system / permease component CYG48_RS19610 PF02653 Branched-chain amino acid transport system / permease component CYG48_RS19615 PF00005 ABC transporter CYG48_RS19620 PF13407 Periplasmic binding protein domain CYG48_RS19625 PF00455 DeoR C terminal sensor domain CYG48_RS19625 PF08220 DeoR-like helix-turn-helix domain CYG48_RS19630 PF00596 Class II Aldolase and Adducin N-terminal domain CYG48_RS19635 PF01261 Xylose isomerase-like TIM barrel CYG48_RS19640 PF02446 4-alpha-glucanotransferase CYG48_RS19645 PF02311 AraC-like ligand binding domain CYG48_RS19645 PF12833 Helix-turn-helix domain CYG48_RS19650 PF00171 Aldehyde dehydrogenase family CYG48_RS19660 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CYG48_RS19660 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CYG48_RS19665 PF03450 CO dehydrogenase flavoprotein C-terminal domain CYG48_RS19665 PF00941 FAD binding domain in molybdopterin dehydrogenase CYG48_RS19670 PF10518 TAT (twin-arginine translocation) pathway signal sequence CYG48_RS19670 PF01799 [2Fe-2S] binding domain CYG48_RS19670 PF00111 2Fe-2S iron-sulfur cluster binding domain CYG48_RS19675 PF00027 Cyclic nucleotide-binding domain CYG48_RS19675 PF13545 Crp-like helix-turn-helix domain CYG48_RS19680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG48_RS19680 PF13426 PAS domain CYG48_RS19680 PF00072 Response regulator receiver domain CYG48_RS19685 PF03597 Cytochrome oxidase maturation protein cbb3-type CYG48_RS19695 PF05751 FixH CYG48_RS19700 PF12801 4Fe-4S binding domain CYG48_RS19700 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase CYG48_RS19700 PF13746 4Fe-4S dicluster domain CYG48_RS19705 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CYG48_RS19705 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP CYG48_RS19720 PF00115 Cytochrome C and Quinol oxidase polypeptide I CYG48_RS19725 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS19730 PF09084 NMT1/THI5 like CYG48_RS19735 PF03786 D-mannonate dehydratase (UxuA) CYG48_RS19740 PF00107 Zinc-binding dehydrogenase CYG48_RS19740 PF08240 Alcohol dehydrogenase GroES-like domain CYG48_RS19745 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CYG48_RS19755 PF03480 Bacterial extracellular solute-binding protein, family 7 CYG48_RS19760 PF00392 Bacterial regulatory proteins, gntR family CYG48_RS19760 PF07729 FCD domain CYG48_RS19765 PF00356 Bacterial regulatory proteins, lacI family CYG48_RS19765 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CYG48_RS19770 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CYG48_RS19770 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CYG48_RS19775 PF07005 Sugar-binding N-terminal domain CYG48_RS19775 PF17042 Nucleotide-binding C-terminal domain CYG48_RS19780 PF00596 Class II Aldolase and Adducin N-terminal domain CYG48_RS19785 PF01261 Xylose isomerase-like TIM barrel CYG48_RS19790 PF01370 NAD dependent epimerase/dehydratase family CYG48_RS19800 PF17912 MalK OB fold domain CYG48_RS19800 PF03459 TOBE domain CYG48_RS19800 PF00005 ABC transporter CYG48_RS19810 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS19815 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS19820 PF02798 Glutathione S-transferase, N-terminal domain CYG48_RS19830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG48_RS19830 PF01590 GAF domain CYG48_RS19830 PF00360 Phytochrome region CYG48_RS19830 PF08446 PAS fold CYG48_RS19830 PF00512 His Kinase A (phospho-acceptor) domain CYG48_RS19835 PF00072 Response regulator receiver domain CYG48_RS19850 PF03775 Septum formation inhibitor MinC, C-terminal domain CYG48_RS19855 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CYG48_RS19860 PF03776 Septum formation topological specificity factor MinE CYG48_RS19870 PF05974 Domain of unknown function (DUF892) CYG48_RS19875 PF03328 HpcH/HpaI aldolase/citrate lyase family CYG48_RS19885 PF00296 Luciferase-like monooxygenase CYG48_RS19890 PF01613 Flavin reductase like domain CYG48_RS19900 PF05661 Protein of unknown function (DUF808) CYG48_RS19915 PF05067 Manganese containing catalase CYG48_RS19920 PF01569 PAP2 superfamily CYG48_RS19935 PF00293 NUDIX domain CYG48_RS19945 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS19950 PF03459 TOBE domain CYG48_RS19950 PF00005 ABC transporter CYG48_RS19955 PF00356 Bacterial regulatory proteins, lacI family CYG48_RS19960 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS19965 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS19970 PF00497 Bacterial extracellular solute-binding proteins, family 3 CYG48_RS19975 PF00005 ABC transporter CYG48_RS19980 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CYG48_RS19980 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CYG48_RS19995 PF07886 BA14K-like protein CYG48_RS20000 PF13183 4Fe-4S dicluster domain CYG48_RS20000 PF02754 Cysteine-rich domain CYG48_RS20005 PF01565 FAD binding domain CYG48_RS20010 PF02913 FAD linked oxidases, C-terminal domain CYG48_RS20010 PF01565 FAD binding domain CYG48_RS20025 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CYG48_RS20030 PF00510 Cytochrome c oxidase subunit III CYG48_RS20035 PF00115 Cytochrome C and Quinol oxidase polypeptide I CYG48_RS20040 PF06481 COX Aromatic Rich Motif CYG48_RS20040 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CYG48_RS20045 PF00083 Sugar (and other) transporter CYG48_RS20045 PF07690 Major Facilitator Superfamily CYG48_RS20050 PF00557 Metallopeptidase family M24 CYG48_RS20050 PF01321 Creatinase/Prolidase N-terminal domain CYG48_RS20060 PF00849 RNA pseudouridylate synthase CYG48_RS20060 PF01479 S4 domain CYG48_RS20070 PF14760 Rnk N-terminus CYG48_RS20070 PF01272 Transcription elongation factor, GreA/GreB, C-term CYG48_RS20075 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CYG48_RS20075 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CYG48_RS20080 PF14760 Rnk N-terminus CYG48_RS20080 PF01272 Transcription elongation factor, GreA/GreB, C-term CYG48_RS20110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG48_RS20110 PF03466 LysR substrate binding domain CYG48_RS20125 PF12857 TOBE-like domain CYG48_RS20125 PF00005 ABC transporter CYG48_RS20135 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS20140 PF00392 Bacterial regulatory proteins, gntR family CYG48_RS20140 PF00155 Aminotransferase class I and II CYG48_RS20145 PF00892 EamA-like transporter family CYG48_RS20150 PF03372 Endonuclease/Exonuclease/phosphatase family CYG48_RS20165 PF00817 impB/mucB/samB family CYG48_RS20165 PF11799 impB/mucB/samB family C-terminal domain CYG48_RS20175 PF08447 PAS fold CYG48_RS20175 PF07536 HWE histidine kinase CYG48_RS20175 PF13426 PAS domain CYG48_RS20180 PF01494 FAD binding domain CYG48_RS20185 PF00171 Aldehyde dehydrogenase family CYG48_RS20210 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CYG48_RS20210 PF00205 Thiamine pyrophosphate enzyme, central domain CYG48_RS20210 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CYG48_RS20215 PF00072 Response regulator receiver domain CYG48_RS20215 PF13426 PAS domain CYG48_RS20215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG48_RS20220 PF06745 KaiC CYG48_RS20225 PF12802 MarR family CYG48_RS20230 PF00501 AMP-binding enzyme CYG48_RS20230 PF13193 AMP-binding enzyme C-terminal domain CYG48_RS20235 PF00378 Enoyl-CoA hydratase/isomerase CYG48_RS20255 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CYG48_RS20260 PF13419 Haloacid dehalogenase-like hydrolase CYG48_RS20265 PF00072 Response regulator receiver domain CYG48_RS20265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG48_RS20265 PF13426 PAS domain CYG48_RS20270 PF00072 Response regulator receiver domain CYG48_RS20270 PF00486 Transcriptional regulatory protein, C terminal CYG48_RS20280 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS20285 PF08402 TOBE domain CYG48_RS20285 PF00005 ABC transporter CYG48_RS20300 PF00072 Response regulator receiver domain CYG48_RS20300 PF13188 PAS domain CYG48_RS20300 PF00512 His Kinase A (phospho-acceptor) domain CYG48_RS20300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG48_RS20300 PF08448 PAS fold CYG48_RS20305 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CYG48_RS20310 PF00999 Sodium/hydrogen exchanger family CYG48_RS20325 PF00700 Bacterial flagellin C-terminal helical region CYG48_RS20325 PF00669 Bacterial flagellin N-terminal helical region CYG48_RS20330 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CYG48_RS20330 PF07559 Flagellar basal body protein FlaE CYG48_RS20330 PF00460 Flagella basal body rod protein CYG48_RS20340 PF00563 EAL domain CYG48_RS20340 PF00990 Diguanylate cyclase, GGDEF domain CYG48_RS20340 PF03707 Bacterial signalling protein N terminal repeat CYG48_RS20355 PF00480 ROK family CYG48_RS20355 PF01325 Iron dependent repressor, N-terminal DNA binding domain CYG48_RS20360 PF13416 Bacterial extracellular solute-binding protein CYG48_RS20365 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS20370 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS20375 PF00206 Lyase CYG48_RS20375 PF14698 Argininosuccinate lyase C-terminal CYG48_RS20380 PF00005 ABC transporter CYG48_RS20380 PF08402 TOBE domain CYG48_RS20385 PF00294 pfkB family carbohydrate kinase CYG48_RS20390 PF16657 Maltogenic Amylase, C-terminal domain CYG48_RS20390 PF00128 Alpha amylase, catalytic domain CYG48_RS20405 PF07722 Peptidase C26 CYG48_RS20420 PF01546 Peptidase family M20/M25/M40 CYG48_RS20420 PF07687 Peptidase dimerisation domain CYG48_RS20440 PF02631 RecX family CYG48_RS20445 PF00795 Carbon-nitrogen hydrolase CYG48_RS20450 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS20455 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS20460 PF00005 ABC transporter CYG48_RS20460 PF08402 TOBE domain CYG48_RS20465 PF01547 Bacterial extracellular solute-binding protein CYG48_RS20470 PF00491 Arginase family CYG48_RS20475 PF03466 LysR substrate binding domain CYG48_RS20475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG48_RS20485 PF03480 Bacterial extracellular solute-binding protein, family 7 CYG48_RS20490 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CYG48_RS20505 PF01027 Inhibitor of apoptosis-promoting Bax1 CYG48_RS20515 PF08281 Sigma-70, region 4 CYG48_RS20515 PF04542 Sigma-70 region 2 CYG48_RS20520 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS20525 PF00005 ABC transporter CYG48_RS20535 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CYG48_RS20535 PF08501 Shikimate dehydrogenase substrate binding domain CYG48_RS20535 PF01488 Shikimate / quinate 5-dehydrogenase CYG48_RS20545 PF13458 Periplasmic binding protein CYG48_RS20550 PF02653 Branched-chain amino acid transport system / permease component CYG48_RS20560 PF00005 ABC transporter CYG48_RS20560 PF12399 Branched-chain amino acid ATP-binding cassette transporter CYG48_RS20565 PF00005 ABC transporter CYG48_RS20575 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CYG48_RS20575 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CYG48_RS20575 PF16582 Middle domain of thiamine pyrophosphate CYG48_RS20580 PF03480 Bacterial extracellular solute-binding protein, family 7 CYG48_RS20590 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CYG48_RS20615 PF01613 Flavin reductase like domain CYG48_RS20620 PF13193 AMP-binding enzyme C-terminal domain CYG48_RS20620 PF00501 AMP-binding enzyme CYG48_RS20625 PF04199 Putative cyclase CYG48_RS20640 PF00005 ABC transporter CYG48_RS20645 PF00005 ABC transporter CYG48_RS20645 PF12399 Branched-chain amino acid ATP-binding cassette transporter CYG48_RS20685 PF03808 Glycosyl transferase WecB/TagA/CpsF family CYG48_RS20720 PF00331 Glycosyl hydrolase family 10 CYG48_RS20725 PF01040 UbiA prenyltransferase family CYG48_RS20730 PF01565 FAD binding domain CYG48_RS20730 PF04030 D-arabinono-1,4-lactone oxidase CYG48_RS20735 PF00893 Small Multidrug Resistance protein CYG48_RS20745 PF00202 Aminotransferase class-III CYG48_RS20750 PF09992 Phosphodiester glycosidase CYG48_RS20760 PF04542 Sigma-70 region 2 CYG48_RS20760 PF08281 Sigma-70, region 4 CYG48_RS20780 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CYG48_RS20785 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS20790 PF00571 CBS domain CYG48_RS20790 PF00005 ABC transporter CYG48_RS20825 PF07690 Major Facilitator Superfamily CYG48_RS20830 PF09084 NMT1/THI5 like CYG48_RS20835 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS20840 PF00005 ABC transporter CYG48_RS20845 PF00296 Luciferase-like monooxygenase CYG48_RS20850 PF00005 ABC transporter CYG48_RS20855 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS20860 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS20865 PF00497 Bacterial extracellular solute-binding proteins, family 3 CYG48_RS20870 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family CYG48_RS20875 PF01321 Creatinase/Prolidase N-terminal domain CYG48_RS20875 PF00557 Metallopeptidase family M24 CYG48_RS20880 PF02423 Ornithine cyclodeaminase/mu-crystallin family CYG48_RS20885 PF00291 Pyridoxal-phosphate dependent enzyme CYG48_RS20890 PF00392 Bacterial regulatory proteins, gntR family CYG48_RS20890 PF00155 Aminotransferase class I and II CYG48_RS20895 PF00202 Aminotransferase class-III CYG48_RS20900 PF00171 Aldehyde dehydrogenase family CYG48_RS20905 PF01037 Lrp/AsnC ligand binding domain CYG48_RS20920 PF01022 Bacterial regulatory protein, arsR family CYG48_RS20930 PF00990 Diguanylate cyclase, GGDEF domain CYG48_RS20930 PF08448 PAS fold CYG48_RS20945 PF00313 'Cold-shock' DNA-binding domain CYG48_RS20955 PF00732 GMC oxidoreductase CYG48_RS20955 PF05199 GMC oxidoreductase CYG48_RS20960 PF00392 Bacterial regulatory proteins, gntR family CYG48_RS20960 PF07729 FCD domain CYG48_RS20965 PF03480 Bacterial extracellular solute-binding protein, family 7 CYG48_RS20975 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CYG48_RS20985 PF13193 AMP-binding enzyme C-terminal domain CYG48_RS20985 PF00501 AMP-binding enzyme CYG48_RS20990 PF07715 TonB-dependent Receptor Plug Domain CYG48_RS20990 PF00593 TonB dependent receptor CYG48_RS20995 PF01497 Periplasmic binding protein CYG48_RS21000 PF01032 FecCD transport family CYG48_RS21005 PF00005 ABC transporter CYG48_RS21025 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS21030 PF01048 Phosphorylase superfamily CYG48_RS21060 PF00892 EamA-like transporter family CYG48_RS21065 PF00892 EamA-like transporter family CYG48_RS21105 PF00563 EAL domain CYG48_RS21105 PF08448 PAS fold CYG48_RS21105 PF08447 PAS fold CYG48_RS21105 PF00990 Diguanylate cyclase, GGDEF domain CYG48_RS21110 PF08281 Sigma-70, region 4 CYG48_RS21110 PF04542 Sigma-70 region 2 CYG48_RS21115 PF02627 Carboxymuconolactone decarboxylase family CYG48_RS21120 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CYG48_RS21125 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS21130 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS21130 PF12911 N-terminal TM domain of oligopeptide transport permease C CYG48_RS21135 PF01979 Amidohydrolase family CYG48_RS21150 PF03841 L-seryl-tRNA selenium transferase CYG48_RS21155 PF00005 ABC transporter CYG48_RS21155 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CYG48_RS21160 PF01112 Asparaginase CYG48_RS21165 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CYG48_RS21180 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS21185 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS21185 PF12911 N-terminal TM domain of oligopeptide transport permease C CYG48_RS21190 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CYG48_RS21190 PF00005 ABC transporter CYG48_RS21200 PF00990 Diguanylate cyclase, GGDEF domain CYG48_RS21200 PF08447 PAS fold CYG48_RS21200 PF00563 EAL domain CYG48_RS21200 PF08448 PAS fold CYG48_RS21205 PF00005 ABC transporter CYG48_RS21205 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CYG48_RS21215 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CYG48_RS21220 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS21225 PF12911 N-terminal TM domain of oligopeptide transport permease C CYG48_RS21225 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS21250 PF01292 Prokaryotic cytochrome b561 CYG48_RS21255 PF00174 Oxidoreductase molybdopterin binding domain CYG48_RS21265 PF04545 Sigma-70, region 4 CYG48_RS21265 PF04542 Sigma-70 region 2 CYG48_RS21285 PF13473 Cupredoxin-like domain CYG48_RS21285 PF09375 Imelysin CYG48_RS21290 PF04261 Dyp-type peroxidase family CYG48_RS21295 PF13473 Cupredoxin-like domain CYG48_RS21295 PF09375 Imelysin CYG48_RS21300 PF03239 Iron permease FTR1 family CYG48_RS21325 PF01183 Glycosyl hydrolases family 25 CYG48_RS21335 PF08220 DeoR-like helix-turn-helix domain CYG48_RS21335 PF00455 DeoR C terminal sensor domain CYG48_RS21340 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CYG48_RS21340 PF01266 FAD dependent oxidoreductase CYG48_RS21345 PF08402 TOBE domain CYG48_RS21345 PF00005 ABC transporter CYG48_RS21350 PF00005 ABC transporter CYG48_RS21350 PF17912 MalK OB fold domain CYG48_RS21355 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS21360 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS21375 PF00313 'Cold-shock' DNA-binding domain CYG48_RS21380 PF03328 HpcH/HpaI aldolase/citrate lyase family CYG48_RS21385 PF01575 MaoC like domain CYG48_RS21390 PF00289 Biotin carboxylase, N-terminal domain CYG48_RS21390 PF00364 Biotin-requiring enzyme CYG48_RS21390 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CYG48_RS21390 PF02785 Biotin carboxylase C-terminal domain CYG48_RS21395 PF01039 Carboxyl transferase domain CYG48_RS21400 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CYG48_RS21400 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CYG48_RS21400 PF02770 Acyl-CoA dehydrogenase, middle domain CYG48_RS21410 PF00005 ABC transporter CYG48_RS21410 PF17912 MalK OB fold domain CYG48_RS21415 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS21420 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS21425 PF13416 Bacterial extracellular solute-binding protein CYG48_RS21445 PF02110 Hydroxyethylthiazole kinase family CYG48_RS21450 PF02581 Thiamine monophosphate synthase CYG48_RS21455 PF08543 Phosphomethylpyrimidine kinase CYG48_RS21465 PF00384 Molybdopterin oxidoreductase CYG48_RS21475 PF04909 Amidohydrolase CYG48_RS21480 PF03401 Tripartite tricarboxylate transporter family receptor CYG48_RS21485 PF00005 ABC transporter CYG48_RS21490 PF00005 ABC transporter CYG48_RS21490 PF12399 Branched-chain amino acid ATP-binding cassette transporter CYG48_RS21505 PF13458 Periplasmic binding protein CYG48_RS21510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG48_RS21510 PF03466 LysR substrate binding domain CYG48_RS21520 PF00108 Thiolase, N-terminal domain CYG48_RS21520 PF02803 Thiolase, C-terminal domain CYG48_RS21525 PF01144 Coenzyme A transferase CYG48_RS21530 PF01144 Coenzyme A transferase CYG48_RS21535 PF09339 IclR helix-turn-helix domain CYG48_RS21535 PF01614 Bacterial transcriptional regulator CYG48_RS21545 PF00072 Response regulator receiver domain CYG48_RS21550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG48_RS21550 PF13426 PAS domain CYG48_RS21550 PF00072 Response regulator receiver domain CYG48_RS21560 PF00990 Diguanylate cyclase, GGDEF domain CYG48_RS21560 PF00563 EAL domain CYG48_RS21560 PF13188 PAS domain CYG48_RS21560 PF03707 Bacterial signalling protein N terminal repeat CYG48_RS21580 PF00005 ABC transporter CYG48_RS21585 PF02687 FtsX-like permease family CYG48_RS21585 PF12704 MacB-like periplasmic core domain CYG48_RS21610 PF13188 PAS domain CYG48_RS21610 PF03707 Bacterial signalling protein N terminal repeat CYG48_RS21610 PF00990 Diguanylate cyclase, GGDEF domain CYG48_RS21610 PF00563 EAL domain CYG48_RS21630 PF00005 ABC transporter CYG48_RS21635 PF01032 FecCD transport family CYG48_RS21640 PF01032 FecCD transport family CYG48_RS21655 PF02311 AraC-like ligand binding domain CYG48_RS21655 PF12833 Helix-turn-helix domain CYG48_RS21660 PF00183 Hsp90 protein CYG48_RS21665 PF00141 Peroxidase CYG48_RS21670 PF03466 LysR substrate binding domain CYG48_RS21670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG48_RS21675 PF01494 FAD binding domain CYG48_RS21690 PF01593 Flavin containing amine oxidoreductase CYG48_RS21715 PF04962 KduI/IolB family CYG48_RS21720 PF01261 Xylose isomerase-like TIM barrel CYG48_RS21725 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CYG48_RS21725 PF00205 Thiamine pyrophosphate enzyme, central domain CYG48_RS21725 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CYG48_RS21730 PF00294 pfkB family carbohydrate kinase CYG48_RS21735 PF01418 Helix-turn-helix domain, rpiR family CYG48_RS21735 PF01380 SIS domain CYG48_RS21740 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CYG48_RS21740 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CYG48_RS21745 PF00356 Bacterial regulatory proteins, lacI family CYG48_RS21755 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS21760 PF08402 TOBE domain CYG48_RS21760 PF00005 ABC transporter CYG48_RS21765 PF00459 Inositol monophosphatase family CYG48_RS21770 PF13416 Bacterial extracellular solute-binding protein CYG48_RS21775 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS21780 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS21785 PF08402 TOBE domain CYG48_RS21785 PF00005 ABC transporter CYG48_RS21815 PF01679 Proteolipid membrane potential modulator CYG48_RS21825 PF00271 Helicase conserved C-terminal domain CYG48_RS21825 PF00270 DEAD/DEAH box helicase CYG48_RS21830 PF13458 Periplasmic binding protein CYG48_RS21840 PF00512 His Kinase A (phospho-acceptor) domain CYG48_RS21840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG48_RS21845 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYG48_RS21845 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CYG48_RS21850 PF00873 AcrB/AcrD/AcrF family CYG48_RS21855 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CYG48_RS21860 PF07859 alpha/beta hydrolase fold CYG48_RS21865 PF03466 LysR substrate binding domain CYG48_RS21865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG48_RS21875 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CYG48_RS21875 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CYG48_RS21880 PF03480 Bacterial extracellular solute-binding protein, family 7 CYG48_RS21885 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CYG48_RS21885 PF00205 Thiamine pyrophosphate enzyme, central domain CYG48_RS21885 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CYG48_RS21890 PF00005 ABC transporter CYG48_RS21895 PF12399 Branched-chain amino acid ATP-binding cassette transporter CYG48_RS21895 PF00005 ABC transporter CYG48_RS21905 PF02653 Branched-chain amino acid transport system / permease component CYG48_RS21915 PF00512 His Kinase A (phospho-acceptor) domain CYG48_RS21915 PF00989 PAS fold CYG48_RS21915 PF01627 Hpt domain CYG48_RS21915 PF00497 Bacterial extracellular solute-binding proteins, family 3 CYG48_RS21915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG48_RS21915 PF00072 Response regulator receiver domain CYG48_RS21920 PF00486 Transcriptional regulatory protein, C terminal CYG48_RS21920 PF00072 Response regulator receiver domain CYG48_RS21925 PF14765 Polyketide synthase dehydratase CYG48_RS21925 PF00550 Phosphopantetheine attachment site CYG48_RS21925 PF00698 Acyl transferase domain CYG48_RS21925 PF08240 Alcohol dehydrogenase GroES-like domain CYG48_RS21925 PF16197 Ketoacyl-synthetase C-terminal extension CYG48_RS21925 PF00109 Beta-ketoacyl synthase, N-terminal domain CYG48_RS21925 PF02801 Beta-ketoacyl synthase, C-terminal domain CYG48_RS21925 PF08990 Erythronolide synthase docking CYG48_RS21925 PF08659 KR domain CYG48_RS21940 PF02566 OsmC-like protein CYG48_RS21945 PF13193 AMP-binding enzyme C-terminal domain CYG48_RS21945 PF00501 AMP-binding enzyme CYG48_RS21950 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CYG48_RS21955 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS21960 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS21960 PF12911 N-terminal TM domain of oligopeptide transport permease C CYG48_RS21965 PF00005 ABC transporter CYG48_RS21965 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CYG48_RS21970 PF00950 ABC 3 transport family CYG48_RS21975 PF00950 ABC 3 transport family CYG48_RS21980 PF00005 ABC transporter CYG48_RS21985 PF01297 Zinc-uptake complex component A periplasmic CYG48_RS22000 PF00512 His Kinase A (phospho-acceptor) domain CYG48_RS22000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG48_RS22000 PF08446 PAS fold CYG48_RS22000 PF00360 Phytochrome region CYG48_RS22000 PF01590 GAF domain CYG48_RS22005 PF10755 Protein of unknown function (DUF2585) CYG48_RS22010 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase CYG48_RS22015 PF04116 Fatty acid hydroxylase superfamily CYG48_RS22020 PF00487 Fatty acid desaturase CYG48_RS22030 PF00005 ABC transporter CYG48_RS22035 PF00512 His Kinase A (phospho-acceptor) domain CYG48_RS22035 PF08446 PAS fold CYG48_RS22035 PF00360 Phytochrome region CYG48_RS22035 PF01590 GAF domain CYG48_RS22035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG48_RS22040 PF00296 Luciferase-like monooxygenase CYG48_RS22050 PF00005 ABC transporter CYG48_RS22050 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CYG48_RS22055 PF00005 ABC transporter CYG48_RS22055 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CYG48_RS22060 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS22060 PF12911 N-terminal TM domain of oligopeptide transport permease C CYG48_RS22065 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS22070 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CYG48_RS22090 PF00296 Luciferase-like monooxygenase CYG48_RS22100 PF00005 ABC transporter CYG48_RS22105 PF00528 Binding-protein-dependent transport system inner membrane component CYG48_RS22110 PF00296 Luciferase-like monooxygenase CYG48_RS22120 PF00512 His Kinase A (phospho-acceptor) domain CYG48_RS22120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG48_RS22125 PF00072 Response regulator receiver domain CYG48_RS22125 PF00486 Transcriptional regulatory protein, C terminal CYG48_RS22140 PF08402 TOBE domain CYG48_RS22140 PF00005 ABC transporter CYG48_RS22150 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CYG48_RS22150 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CYG48_RS22155 PF00392 Bacterial regulatory proteins, gntR family CYG48_RS22155 PF07702 UTRA domain CYG48_RS22200 PF10609 NUBPL iron-transfer P-loop NTPase CYG48_RS22210 PF00239 Resolvase, N terminal domain CYG48_RS22230 PF02384 N-6 DNA Methylase CYG48_RS22235 PF07669 Eco57I restriction-modification methylase CYG48_RS22240 PF03389 MobA/MobL family