locus-tag	class	description
NIAKO_RS00010	PF08299	Bacterial dnaA protein helix-turn-helix
NIAKO_RS00010	PF00308	Bacterial dnaA  protein
NIAKO_RS00010	PF11638	DnaA N-terminal domain
NIAKO_RS00045	PF00076	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
NIAKO_RS00070	PF05974	Domain of unknown function (DUF892)
NIAKO_RS00080	PF03275	UDP-galactopyranose mutase
NIAKO_RS00105	PF05067	Manganese containing catalase
NIAKO_RS00125	PF00999	Sodium/hydrogen exchanger family
NIAKO_RS00135	PF00487	Fatty acid desaturase
NIAKO_RS00150	PF03705	CheR methyltransferase, all-alpha domain
NIAKO_RS00150	PF01739	CheR methyltransferase, SAM binding domain
NIAKO_RS00150	PF08448	PAS fold
NIAKO_RS00150	PF01339	CheB methylesterase
NIAKO_RS00165	PF00990	Diguanylate cyclase, GGDEF domain
NIAKO_RS00165	PF00072	Response regulator receiver domain
NIAKO_RS00170	PF00072	Response regulator receiver domain
NIAKO_RS00170	PF07494	Two component regulator propeller
NIAKO_RS00170	PF12833	Helix-turn-helix domain
NIAKO_RS00170	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS00170	PF07495	Y_Y_Y domain
NIAKO_RS00170	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS00175	PF04616	Glycosyl hydrolases family 43
NIAKO_RS00175	PF17851	Beta xylosidase C-terminal Concanavalin A-like domain 
NIAKO_RS00180	PF04616	Glycosyl hydrolases family 43
NIAKO_RS00180	PF05270	Alpha-L-arabinofuranosidase B (ABFB) domain
NIAKO_RS00190	PF00593	TonB dependent receptor
NIAKO_RS00190	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS00200	PF00557	Metallopeptidase family M24
NIAKO_RS00210	PF00230	Major intrinsic protein
NIAKO_RS00220	PF00484	Carbonic anhydrase
NIAKO_RS00225	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS00225	PF00672	HAMP domain
NIAKO_RS00225	PF01627	Hpt domain
NIAKO_RS00225	PF09984	Uncharacterised signal transduction histidine kinase domain (DUF2222)
NIAKO_RS00225	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS00225	PF00072	Response regulator receiver domain
NIAKO_RS00230	PF04397	LytTr DNA-binding domain
NIAKO_RS00230	PF00072	Response regulator receiver domain
NIAKO_RS00235	PF00210	Ferritin-like domain
NIAKO_RS00255	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS00255	PF00593	TonB dependent receptor
NIAKO_RS00275	PF01915	Glycosyl hydrolase family 3 C-terminal domain
NIAKO_RS00275	PF00933	Glycosyl hydrolase family 3 N terminal domain
NIAKO_RS00275	PF14310	Fibronectin type III-like domain
NIAKO_RS00290	PF00455	DeoR C terminal sensor domain
NIAKO_RS00290	PF08220	DeoR-like helix-turn-helix domain
NIAKO_RS00300	PF00456	Transketolase, thiamine diphosphate binding domain
NIAKO_RS00305	PF02780	Transketolase, C-terminal domain
NIAKO_RS00305	PF02779	Transketolase, pyrimidine binding domain
NIAKO_RS00310	PF13407	Periplasmic binding protein domain
NIAKO_RS00320	PF00005	ABC transporter
NIAKO_RS00325	PF02653	Branched-chain amino acid transport system / permease component
NIAKO_RS00330	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
NIAKO_RS00330	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
NIAKO_RS00345	PF13229	Right handed beta helix region
NIAKO_RS00370	PF01050	Mannose-6-phosphate isomerase
NIAKO_RS00370	PF00483	Nucleotidyl transferase
NIAKO_RS00380	PF13614	AAA domain
NIAKO_RS00380	PF13807	G-rich domain on putative tyrosine kinase
NIAKO_RS00380	PF02706	Chain length determinant protein
NIAKO_RS00390	PF16363	GDP-mannose 4,6 dehydratase
NIAKO_RS00410	PF00534	Glycosyl transferases group 1
NIAKO_RS00410	PF08323	Starch synthase catalytic domain
NIAKO_RS00420	PF00132	Bacterial transferase hexapeptide (six repeats)
NIAKO_RS00425	PF03808	Glycosyl transferase WecB/TagA/CpsF family
NIAKO_RS00430	PF02397	Bacterial sugar transferase
NIAKO_RS00440	PF13439	Glycosyltransferase Family 4
NIAKO_RS00440	PF00534	Glycosyl transferases group 1
NIAKO_RS00455	PF00107	Zinc-binding dehydrogenase
NIAKO_RS00455	PF08240	Alcohol dehydrogenase GroES-like domain
NIAKO_RS00470	PF00581	Rhodanese-like domain
NIAKO_RS00470	PF00899	ThiF family
NIAKO_RS00480	PF08502	LeuA allosteric (dimerisation) domain
NIAKO_RS00480	PF00682	HMGL-like
NIAKO_RS00485	PF00180	Isocitrate/isopropylmalate dehydrogenase
NIAKO_RS00490	PF00920	Dehydratase family
NIAKO_RS00495	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
NIAKO_RS00495	PF00205	Thiamine pyrophosphate enzyme, central domain
NIAKO_RS00495	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
NIAKO_RS00510	PF07991	Acetohydroxy acid isomeroreductase, NADPH-binding domain
NIAKO_RS00510	PF01450	Acetohydroxy acid isomeroreductase, catalytic domain
NIAKO_RS00515	PF00291	Pyridoxal-phosphate dependent enzyme
NIAKO_RS00515	PF00585	C-terminal regulatory domain of Threonine dehydratase
NIAKO_RS00520	PF01645	Conserved region in glutamate synthase
NIAKO_RS00520	PF04898	Glutamate synthase central domain
NIAKO_RS00520	PF00310	Glutamine amidotransferases class-II
NIAKO_RS00520	PF01493	GXGXG motif
NIAKO_RS00525	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
NIAKO_RS00525	PF07992	Pyridine nucleotide-disulphide oxidoreductase
NIAKO_RS00530	PF00909	Ammonium Transporter Family
NIAKO_RS00540	PF00909	Ammonium Transporter Family
NIAKO_RS00545	PF00311	Phosphoenolpyruvate carboxylase
NIAKO_RS00550	PF01842	ACT domain
NIAKO_RS00550	PF13840	ACT domain 
NIAKO_RS00550	PF03447	Homoserine dehydrogenase, NAD binding domain
NIAKO_RS00550	PF00742	Homoserine dehydrogenase
NIAKO_RS00550	PF00696	Amino acid kinase family
NIAKO_RS00555	PF08544	GHMP kinases C terminal 
NIAKO_RS00555	PF00288	GHMP kinases N terminal domain
NIAKO_RS00560	PF14821	Threonine synthase N terminus
NIAKO_RS00560	PF00291	Pyridoxal-phosphate dependent enzyme
NIAKO_RS00565	PF01842	ACT domain
NIAKO_RS00565	PF03447	Homoserine dehydrogenase, NAD binding domain
NIAKO_RS00565	PF00742	Homoserine dehydrogenase
NIAKO_RS00570	PF14489	QueF-like protein
NIAKO_RS00575	PF01053	Cys/Met metabolism PLP-dependent enzyme
NIAKO_RS00590	PF05736	OprF membrane domain
NIAKO_RS00590	PF00691	OmpA family
NIAKO_RS00595	PF17755	UvrA DNA-binding domain
NIAKO_RS00595	PF17760	UvrA interaction domain
NIAKO_RS00595	PF00005	ABC transporter
NIAKO_RS00600	PF06941	5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)
NIAKO_RS00620	PF13673	Acetyltransferase (GNAT) domain
NIAKO_RS00625	PF12002	MgsA AAA+ ATPase C terminal
NIAKO_RS00625	PF16193	AAA C-terminal domain
NIAKO_RS00625	PF00004	ATPase family associated with various cellular activities (AAA)
NIAKO_RS00635	PF00152	tRNA synthetases class II (D, K and N) 
NIAKO_RS00635	PF01336	OB-fold nucleic acid binding domain
NIAKO_RS00635	PF02938	GAD domain
NIAKO_RS00665	PF01835	MG2 domain
NIAKO_RS00665	PF11974	Bacterial alpha-2-macroglobulin MG3 domain
NIAKO_RS00665	PF17973	Bacterial Alpha-2-macroglobulin MG10 domain
NIAKO_RS00665	PF17972	Bacterial Alpha-2-macroglobulin MG5 domain
NIAKO_RS00665	PF17962	Bacterial macroglobulin domain 6
NIAKO_RS00665	PF07703	Alpha-2-macroglobulin bait region domain
NIAKO_RS00665	PF00207	Alpha-2-macroglobulin family
NIAKO_RS00675	PF00549	CoA-ligase
NIAKO_RS00675	PF02629	CoA binding domain
NIAKO_RS00680	PF00005	ABC transporter
NIAKO_RS00685	PF02405	Permease MlaE
NIAKO_RS00690	PF03949	Malic enzyme, NAD binding domain
NIAKO_RS00690	PF01515	Phosphate acetyl/butaryl transferase
NIAKO_RS00690	PF00390	Malic enzyme, N-terminal domain
NIAKO_RS00720	PF00005	ABC transporter
NIAKO_RS00730	PF00392	Bacterial regulatory proteins, gntR family
NIAKO_RS00745	PF07687	Peptidase dimerisation domain
NIAKO_RS00745	PF01546	Peptidase family M20/M25/M40
NIAKO_RS00765	PF01791	DeoC/LacD family aldolase
NIAKO_RS00770	PF01979	Amidohydrolase family
NIAKO_RS00775	PF01979	Amidohydrolase family
NIAKO_RS00795	PF04072	Leucine carboxyl methyltransferase
NIAKO_RS00800	PF09992	Phosphodiester glycosidase
NIAKO_RS00810	PF07517	SecA DEAD-like domain
NIAKO_RS00810	PF01043	SecA preprotein cross-linking domain
NIAKO_RS00810	PF07516	SecA Wing and Scaffold domain
NIAKO_RS00815	PF02481	DNA recombination-mediator protein A
NIAKO_RS00815	PF17782	DprA winged helix domain
NIAKO_RS00820	PF00691	OmpA family
NIAKO_RS00820	PF01389	OmpA-like transmembrane domain
NIAKO_RS00825	PF04055	Radical SAM superfamily
NIAKO_RS00830	PF02882	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
NIAKO_RS00830	PF00763	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
NIAKO_RS00845	PF00593	TonB dependent receptor
NIAKO_RS00845	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS00860	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS00860	PF00593	TonB dependent receptor
NIAKO_RS00875	PF04002	RadC-like JAB domain
NIAKO_RS00885	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
NIAKO_RS00885	PF14572	Phosphoribosyl synthetase-associated domain
NIAKO_RS00890	PF01386	Ribosomal L25p family
NIAKO_RS00890	PF14693	Ribosomal protein TL5, C-terminal domain
NIAKO_RS00900	PF01195	Peptidyl-tRNA hydrolase
NIAKO_RS00905	PF01557	Fumarylacetoacetate (FAA) hydrolase family
NIAKO_RS00910	PF02780	Transketolase, C-terminal domain
NIAKO_RS00910	PF02779	Transketolase, pyrimidine binding domain
NIAKO_RS00920	PF01545	Cation efflux family
NIAKO_RS00920	PF16916	Dimerisation domain of Zinc Transporter
NIAKO_RS00930	PF01048	Phosphorylase superfamily
NIAKO_RS00935	PF00884	Sulfatase
NIAKO_RS00935	PF16385	Domain of unknown function
NIAKO_RS00940	PF03781	Sulfatase-modifying factor enzyme 1
NIAKO_RS00945	PF17678	Glycosyl hydrolase family 92 N-terminal domain
NIAKO_RS00945	PF07971	Glycosyl hydrolase family 92
NIAKO_RS00950	PF00356	Bacterial regulatory proteins, lacI family
NIAKO_RS01010	PF03473	MOSC domain
NIAKO_RS01010	PF00111	2Fe-2S iron-sulfur cluster binding domain
NIAKO_RS01010	PF03476	MOSC N-terminal beta barrel domain
NIAKO_RS01050	PF00005	ABC transporter
NIAKO_RS01055	PF13472	GDSL-like Lipase/Acylhydrolase family
NIAKO_RS01060	PF07992	Pyridine nucleotide-disulphide oxidoreductase
NIAKO_RS01070	PF01458	Uncharacterized protein family (UPF0051)
NIAKO_RS01075	PF00005	ABC transporter
NIAKO_RS01080	PF01458	Uncharacterized protein family (UPF0051)
NIAKO_RS01085	PF00266	Aminotransferase class-V
NIAKO_RS01090	PF02657	Fe-S metabolism associated domain
NIAKO_RS01125	PF01494	FAD binding domain
NIAKO_RS01150	PF04542	Sigma-70 region 2 
NIAKO_RS01150	PF08281	Sigma-70, region 4
NIAKO_RS01155	PF00593	TonB dependent receptor
NIAKO_RS01155	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS01185	PF17853	GGDEF-like domain
NIAKO_RS01185	PF12833	Helix-turn-helix domain
NIAKO_RS01205	PF00072	Response regulator receiver domain
NIAKO_RS01210	PF01627	Hpt domain
NIAKO_RS01210	PF07194	P2 response regulator binding domain
NIAKO_RS01210	PF01584	CheW-like domain
NIAKO_RS01210	PF02895	Signal transducing histidine kinase, homodimeric domain
NIAKO_RS01210	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS01215	PF01584	CheW-like domain
NIAKO_RS01220	PF12729	Four helix bundle sensory module for signal transduction
NIAKO_RS01220	PF00672	HAMP domain
NIAKO_RS01220	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
NIAKO_RS01230	PF03705	CheR methyltransferase, all-alpha domain
NIAKO_RS01230	PF01739	CheR methyltransferase, SAM binding domain
NIAKO_RS01240	PF00593	TonB dependent receptor
NIAKO_RS01240	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS01250	PF01389	OmpA-like transmembrane domain
NIAKO_RS01250	PF00691	OmpA family
NIAKO_RS01285	PF01022	Bacterial regulatory protein, arsR family
NIAKO_RS01290	PF09962	Uncharacterized conserved protein (DUF2196)
NIAKO_RS01300	PF03306	Alpha-acetolactate decarboxylase
NIAKO_RS01320	PF11838	ERAP1-like C-terminal domain
NIAKO_RS01320	PF01433	Peptidase family M1 domain
NIAKO_RS01325	PF07859	alpha/beta hydrolase fold
NIAKO_RS01330	PF12833	Helix-turn-helix domain
NIAKO_RS01330	PF02805	Metal binding domain of Ada
NIAKO_RS01335	PF14592	Chondroitinase B
NIAKO_RS01350	PF00072	Response regulator receiver domain
NIAKO_RS01350	PF04397	LytTr DNA-binding domain
NIAKO_RS01355	PF02687	FtsX-like permease family
NIAKO_RS01355	PF00005	ABC transporter
NIAKO_RS01355	PF12704	MacB-like periplasmic core domain
NIAKO_RS01380	PF00440	Bacterial regulatory proteins, tetR family
NIAKO_RS01385	PF00106	short chain dehydrogenase
NIAKO_RS01405	PF04973	Nicotinamide mononucleotide transporter
NIAKO_RS01410	PF01381	Helix-turn-helix
NIAKO_RS01410	PF13521	AAA domain
NIAKO_RS01415	PF07075	Protein of unknown function (DUF1343)
NIAKO_RS01420	PF00155	Aminotransferase class I and II
NIAKO_RS01435	PF02779	Transketolase, pyrimidine binding domain
NIAKO_RS01435	PF02780	Transketolase, C-terminal domain
NIAKO_RS01440	PF02567	Phenazine biosynthesis-like protein
NIAKO_RS01450	PF04134	Protein of unknown function, DUF393
NIAKO_RS01455	PF01709	Transcriptional regulator
NIAKO_RS01460	PF13520	Amino acid permease
NIAKO_RS01465	PF00375	Sodium:dicarboxylate symporter family
NIAKO_RS01470	PF09335	SNARE associated Golgi protein
NIAKO_RS01475	PF07690	Major Facilitator Superfamily
NIAKO_RS01480	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
NIAKO_RS01505	PF00056	lactate/malate dehydrogenase, NAD binding domain
NIAKO_RS01505	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
NIAKO_RS01525	PF08207	Elongation factor P (EF-P) KOW-like domain
NIAKO_RS01525	PF01132	Elongation factor P (EF-P) OB domain
NIAKO_RS01525	PF09285	Elongation factor P, C-terminal
NIAKO_RS01530	PF00364	Biotin-requiring enzyme
NIAKO_RS01535	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
NIAKO_RS01535	PF00289	Biotin carboxylase, N-terminal domain
NIAKO_RS01535	PF02785	Biotin carboxylase C-terminal domain
NIAKO_RS01545	PF02401	LytB protein
NIAKO_RS01550	PF11896	Domain of unknown function (DUF3416)
NIAKO_RS01550	PF00128	Alpha amylase, catalytic domain
NIAKO_RS01555	PF13180	PDZ domain
NIAKO_RS01555	PF17820	PDZ domain
NIAKO_RS01565	PF00037	4Fe-4S binding domain
NIAKO_RS01570	PF00037	4Fe-4S binding domain
NIAKO_RS01575	PF01820	D-ala D-ala ligase N-terminus
NIAKO_RS01575	PF07478	D-ala D-ala ligase C-terminus
NIAKO_RS01585	PF00581	Rhodanese-like domain
NIAKO_RS01585	PF00899	ThiF family
NIAKO_RS01590	PF03793	PASTA domain
NIAKO_RS01590	PF00069	Protein kinase domain
NIAKO_RS01615	PF01541	GIY-YIG catalytic domain
NIAKO_RS01625	PF01926	50S ribosome-binding GTPase
NIAKO_RS01625	PF07650	KH domain
NIAKO_RS01630	PF01926	50S ribosome-binding GTPase
NIAKO_RS01630	PF14714	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
NIAKO_RS01640	PF16314	Domain of unknown function (DUF4954)
NIAKO_RS01645	PF01380	SIS domain
NIAKO_RS01650	PF07676	WD40-like Beta Propeller Repeat
NIAKO_RS01650	PF00326	Prolyl oligopeptidase family
NIAKO_RS01655	PF01769	Divalent cation transporter
NIAKO_RS01655	PF00571	CBS domain
NIAKO_RS01655	PF03448	MgtE intracellular N domain
NIAKO_RS01685	PF01062	Bestrophin, RFP-TM, chloride channel
NIAKO_RS01705	PF00834	Ribulose-phosphate 3 epimerase family
NIAKO_RS01710	PF01209	ubiE/COQ5 methyltransferase family
NIAKO_RS01715	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
NIAKO_RS01715	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
NIAKO_RS01745	PF03740	Pyridoxal phosphate biosynthesis protein PdxJ
NIAKO_RS01750	PF14542	GCN5-related N-acetyl-transferase
NIAKO_RS01760	PF04715	Anthranilate synthase component I, N terminal region
NIAKO_RS01760	PF00425	chorismate binding enzyme
NIAKO_RS01765	PF00117	Glutamine amidotransferase class-I
NIAKO_RS01770	PF00591	Glycosyl transferase family, a/b domain
NIAKO_RS01770	PF02885	Glycosyl transferase family, helical bundle domain
NIAKO_RS01775	PF00218	Indole-3-glycerol phosphate synthase
NIAKO_RS01780	PF00697	N-(5'phosphoribosyl)anthranilate (PRA) isomerase
NIAKO_RS01790	PF00291	Pyridoxal-phosphate dependent enzyme
NIAKO_RS01795	PF00290	Tryptophan synthase alpha chain
NIAKO_RS01800	PF00117	Glutamine amidotransferase class-I
NIAKO_RS01805	PF00977	Histidine biosynthesis protein
NIAKO_RS01810	PF00977	Histidine biosynthesis protein
NIAKO_RS01820	PF01503	Phosphoribosyl-ATP pyrophosphohydrolase
NIAKO_RS01820	PF01502	Phosphoribosyl-AMP cyclohydrolase
NIAKO_RS01825	PF00578	AhpC/TSA family
NIAKO_RS01835	PF00912	Transglycosylase
NIAKO_RS01835	PF00905	Penicillin binding protein transpeptidase domain
NIAKO_RS01865	PF00583	Acetyltransferase (GNAT) family
NIAKO_RS01875	PF00549	CoA-ligase
NIAKO_RS01875	PF08442	ATP-grasp domain
NIAKO_RS01880	PF01048	Phosphorylase superfamily
NIAKO_RS01895	PF00873	AcrB/AcrD/AcrF family
NIAKO_RS01925	PF13520	Amino acid permease
NIAKO_RS01930	PF06751	Ethanolamine ammonia lyase large subunit (EutB)
NIAKO_RS01935	PF05985	Ethanolamine ammonia-lyase light chain (EutC)
NIAKO_RS01945	PF04107	Glutamate-cysteine ligase family 2(GCS2)
NIAKO_RS01965	PF00593	TonB dependent receptor
NIAKO_RS01970	PF00593	TonB dependent receptor
NIAKO_RS01975	PF00925	GTP cyclohydrolase II
NIAKO_RS01975	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
NIAKO_RS02045	PF02899	Phage integrase, N-terminal SAM-like domain
NIAKO_RS02045	PF00589	Phage integrase family
NIAKO_RS02055	PF02021	Uncharacterised protein family UPF0102
NIAKO_RS02060	PF01238	Phosphomannose isomerase type I
NIAKO_RS02070	PF12419	SNF2 Helicase protein 
NIAKO_RS02070	PF00271	Helicase conserved C-terminal domain
NIAKO_RS02070	PF00176	SNF2 family N-terminal domain
NIAKO_RS02075	PF00075	RNase H
NIAKO_RS02080	PF01039	Carboxyl transferase domain
NIAKO_RS02085	PF01596	O-methyltransferase
NIAKO_RS02120	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS02120	PF00593	TonB dependent receptor
NIAKO_RS02145	PF00576	HIUase/Transthyretin family
NIAKO_RS02155	PF05899	Protein of unknown function (DUF861)
NIAKO_RS02155	PF07883	Cupin domain
NIAKO_RS02160	PF07687	Peptidase dimerisation domain
NIAKO_RS02160	PF01546	Peptidase family M20/M25/M40
NIAKO_RS02165	PF01979	Amidohydrolase family
NIAKO_RS02170	PF01014	Uricase
NIAKO_RS02180	PF01774	UreD urease accessory protein
NIAKO_RS02185	PF02492	CobW/HypB/UreG, nucleotide-binding domain
NIAKO_RS02190	PF01730	UreF
NIAKO_RS02195	PF05194	UreE urease accessory protein, C-terminal domain
NIAKO_RS02195	PF02814	UreE urease accessory protein, N-terminal domain
NIAKO_RS02200	PF00449	Urease alpha-subunit, N-terminal domain
NIAKO_RS02200	PF01979	Amidohydrolase family
NIAKO_RS02205	PF00699	Urease beta subunit
NIAKO_RS02210	PF00547	Urease, gamma subunit
NIAKO_RS02215	PF13478	XdhC Rossmann domain
NIAKO_RS02215	PF02625	XdhC and CoxI family
NIAKO_RS02220	PF02738	Molybdopterin-binding domain of aldehyde dehydrogenase
NIAKO_RS02220	PF01315	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
NIAKO_RS02225	PF01799	[2Fe-2S] binding domain
NIAKO_RS02225	PF00111	2Fe-2S iron-sulfur cluster binding domain
NIAKO_RS02230	PF01037	Lrp/AsnC ligand binding domain
NIAKO_RS02230	PF13404	AsnC-type helix-turn-helix domain
NIAKO_RS02235	PF00171	Aldehyde dehydrogenase family
NIAKO_RS02240	PF00202	Aminotransferase class-III
NIAKO_RS02245	PF02133	Permease for cytosine/purines, uracil, thiamine, allantoin
NIAKO_RS02250	PF01979	Amidohydrolase family
NIAKO_RS02255	PF00795	Carbon-nitrogen hydrolase
NIAKO_RS02260	PF07992	Pyridine nucleotide-disulphide oxidoreductase
NIAKO_RS02260	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
NIAKO_RS02265	PF01180	Dihydroorotate dehydrogenase
NIAKO_RS02370	PF00155	Aminotransferase class I and II
NIAKO_RS02370	PF00392	Bacterial regulatory proteins, gntR family
NIAKO_RS02380	PF00196	Bacterial regulatory proteins, luxR family
NIAKO_RS02380	PF00072	Response regulator receiver domain
NIAKO_RS02440	PF03448	MgtE intracellular N domain
NIAKO_RS02440	PF00571	CBS domain
NIAKO_RS02440	PF01769	Divalent cation transporter
NIAKO_RS02445	PF12833	Helix-turn-helix domain
NIAKO_RS02455	PF12833	Helix-turn-helix domain
NIAKO_RS02455	PF02311	AraC-like ligand binding domain
NIAKO_RS02470	PF12833	Helix-turn-helix domain
NIAKO_RS02525	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS02525	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS02530	PF00535	Glycosyl transferase family 2
NIAKO_RS02560	PF00581	Rhodanese-like domain
NIAKO_RS02590	PF00730	HhH-GPD superfamily base excision DNA repair protein
NIAKO_RS02590	PF00633	Helix-hairpin-helix motif
NIAKO_RS02595	PF00392	Bacterial regulatory proteins, gntR family
NIAKO_RS02595	PF07702	UTRA domain
NIAKO_RS02610	PF01238	Phosphomannose isomerase type I
NIAKO_RS02615	PF17678	Glycosyl hydrolase family 92 N-terminal domain
NIAKO_RS02615	PF07971	Glycosyl hydrolase family 92
NIAKO_RS02620	PF00083	Sugar (and other) transporter
NIAKO_RS02625	PF00480	ROK family
NIAKO_RS02655	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS02655	PF00593	TonB dependent receptor
NIAKO_RS02690	PF13442	Cytochrome C oxidase, cbb3-type, subunit III 
NIAKO_RS02690	PF00034	Cytochrome c
NIAKO_RS02690	PF02738	Molybdopterin-binding domain of aldehyde dehydrogenase
NIAKO_RS02695	PF01799	[2Fe-2S] binding domain
NIAKO_RS02695	PF00111	2Fe-2S iron-sulfur cluster binding domain
NIAKO_RS02700	PF02625	XdhC and CoxI family
NIAKO_RS02700	PF13478	XdhC Rossmann domain
NIAKO_RS02705	PF14602	Hexapeptide repeat of succinyl-transferase
NIAKO_RS02705	PF00132	Bacterial transferase hexapeptide (six repeats)
NIAKO_RS02705	PF12804	MobA-like NTP transferase domain
NIAKO_RS02710	PF06463	Molybdenum Cofactor Synthesis C
NIAKO_RS02710	PF04055	Radical SAM superfamily
NIAKO_RS02715	PF03453	MoeA N-terminal region (domain I and II)
NIAKO_RS02715	PF03454	MoeA C-terminal region (domain IV)
NIAKO_RS02715	PF00994	Probable molybdopterin binding domain
NIAKO_RS02725	PF02391	MoaE protein
NIAKO_RS02730	PF01967	MoaC family
NIAKO_RS02730	PF00994	Probable molybdopterin binding domain
NIAKO_RS02750	PF07729	FCD domain
NIAKO_RS02750	PF00392	Bacterial regulatory proteins, gntR family
NIAKO_RS02755	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS02755	PF00593	TonB dependent receptor
NIAKO_RS02765	PF00701	Dihydrodipicolinate synthetase family
NIAKO_RS02770	PF13088	BNR repeat-like domain
NIAKO_RS02770	PF10633	NPCBM-associated, NEW3 domain of alpha-galactosidase
NIAKO_RS02770	PF00754	F5/8 type C domain
NIAKO_RS02775	PF00701	Dihydrodipicolinate synthetase family
NIAKO_RS02780	PF00474	Sodium:solute symporter family
NIAKO_RS02800	PF03819	MazG nucleotide pyrophosphohydrolase domain
NIAKO_RS02805	PF00672	HAMP domain
NIAKO_RS02805	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS02805	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS02810	PF14791	DNA polymerase beta thumb 
NIAKO_RS02810	PF14716	Helix-hairpin-helix domain
NIAKO_RS02810	PF02811	PHP domain
NIAKO_RS02820	PF02436	Conserved carboxylase domain
NIAKO_RS02820	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
NIAKO_RS02820	PF02785	Biotin carboxylase C-terminal domain
NIAKO_RS02820	PF00289	Biotin carboxylase, N-terminal domain
NIAKO_RS02820	PF00682	HMGL-like
NIAKO_RS02820	PF00364	Biotin-requiring enzyme
NIAKO_RS02830	PF01016	Ribosomal L27 protein
NIAKO_RS02835	PF00829	Ribosomal prokaryotic L21 protein
NIAKO_RS02845	PF08436	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain
NIAKO_RS02845	PF13288	DXP reductoisomerase C-terminal domain
NIAKO_RS02845	PF02670	1-deoxy-D-xylulose 5-phosphate reductoisomerase
NIAKO_RS02850	PF02163	Peptidase family M50
NIAKO_RS02850	PF17820	PDZ domain
NIAKO_RS02870	PF12704	MacB-like periplasmic core domain
NIAKO_RS02870	PF02687	FtsX-like permease family
NIAKO_RS02895	PF00106	short chain dehydrogenase
NIAKO_RS02910	PF00248	Aldo/keto reductase family
NIAKO_RS02920	PF12833	Helix-turn-helix domain
NIAKO_RS02925	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
NIAKO_RS02955	PF07859	alpha/beta hydrolase fold
NIAKO_RS02960	PF02678	Pirin
NIAKO_RS02960	PF17954	Quercetinase C-terminal cupin domain
NIAKO_RS02990	PF08240	Alcohol dehydrogenase GroES-like domain
NIAKO_RS02990	PF00107	Zinc-binding dehydrogenase
NIAKO_RS03000	PF14525	AraC-binding-like domain
NIAKO_RS03000	PF12833	Helix-turn-helix domain
NIAKO_RS03005	PF16363	GDP-mannose 4,6 dehydratase
NIAKO_RS03010	PF03928	Haem-degrading
NIAKO_RS03030	PF06580	Histidine kinase
NIAKO_RS03030	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS03035	PF00072	Response regulator receiver domain
NIAKO_RS03035	PF04397	LytTr DNA-binding domain
NIAKO_RS03090	PF01037	Lrp/AsnC ligand binding domain
NIAKO_RS03110	PF13229	Right handed beta helix region
NIAKO_RS03130	PF07694	5TMR of 5TMR-LYT
NIAKO_RS03130	PF06580	Histidine kinase
NIAKO_RS03130	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS03135	PF04397	LytTr DNA-binding domain
NIAKO_RS03135	PF00072	Response regulator receiver domain
NIAKO_RS03150	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
NIAKO_RS03190	PF05656	Protein of unknown function (DUF805)
NIAKO_RS03200	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS03200	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS03205	PF00196	Bacterial regulatory proteins, luxR family
NIAKO_RS03205	PF00072	Response regulator receiver domain
NIAKO_RS03220	PF02705	K+ potassium transporter
NIAKO_RS03230	PF01872	RibD C-terminal domain
NIAKO_RS03255	PF02018	Carbohydrate binding domain
NIAKO_RS03255	PF00722	Glycosyl hydrolases family 16
NIAKO_RS03290	PF00583	Acetyltransferase (GNAT) family
NIAKO_RS03290	PF01047	MarR family
NIAKO_RS03330	PF03062	MBOAT, membrane-bound O-acyltransferase family
NIAKO_RS03360	PF00196	Bacterial regulatory proteins, luxR family
NIAKO_RS03360	PF00072	Response regulator receiver domain
NIAKO_RS03365	PF00672	HAMP domain
NIAKO_RS03365	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS03365	PF07730	Histidine kinase
NIAKO_RS03380	PF06480	FtsH Extracellular
NIAKO_RS03380	PF01434	Peptidase family M41
NIAKO_RS03380	PF17862	AAA+ lid domain
NIAKO_RS03380	PF00004	ATPase family associated with various cellular activities (AAA)
NIAKO_RS03395	PF00248	Aldo/keto reductase family
NIAKO_RS03415	PF02638	Glycosyl hydrolase-like 10
NIAKO_RS03425	PF16657	Maltogenic Amylase, C-terminal domain
NIAKO_RS03425	PF00128	Alpha amylase, catalytic domain
NIAKO_RS03435	PF01161	Phosphatidylethanolamine-binding protein
NIAKO_RS03445	PF01568	Molydopterin dinucleotide binding domain
NIAKO_RS03445	PF00384	Molybdopterin oxidoreductase
NIAKO_RS03450	PF02634	FdhD/NarQ family
NIAKO_RS03455	PF06964	Alpha-L-arabinofuranosidase C-terminal domain
NIAKO_RS03460	PF01263	Aldose 1-epimerase
NIAKO_RS03475	PF13439	Glycosyltransferase Family 4
NIAKO_RS03490	PF08220	DeoR-like helix-turn-helix domain
NIAKO_RS03490	PF00455	DeoR C terminal sensor domain
NIAKO_RS03495	PF01266	FAD dependent oxidoreductase
NIAKO_RS03495	PF16901	C-terminal domain of alpha-glycerophosphate oxidase
NIAKO_RS03510	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
NIAKO_RS03510	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
NIAKO_RS03515	PF00230	Major intrinsic protein
NIAKO_RS03520	PF03009	Glycerophosphoryl diester phosphodiesterase family
NIAKO_RS03530	PF00295	Glycosyl hydrolases family 28
NIAKO_RS03540	PF04962	KduI/IolB family
NIAKO_RS03545	PF06964	Alpha-L-arabinofuranosidase C-terminal domain
NIAKO_RS03545	PF02018	Carbohydrate binding domain
NIAKO_RS03550	PF04616	Glycosyl hydrolases family 43
NIAKO_RS03565	PF00593	TonB dependent receptor
NIAKO_RS03565	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS03580	PF07980	SusD family
NIAKO_RS03580	PF14322	Starch-binding associating with outer membrane
NIAKO_RS03585	PF00593	TonB dependent receptor
NIAKO_RS03585	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS03600	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS03600	PF00593	TonB dependent receptor
NIAKO_RS03615	PF02837	Glycosyl hydrolases family 2, sugar binding domain
NIAKO_RS03650	PF00331	Glycosyl hydrolase family 10
NIAKO_RS03665	PF07488	Glycosyl hydrolase family 67 middle domain
NIAKO_RS03665	PF03648	Glycosyl hydrolase family 67 N-terminus
NIAKO_RS03665	PF07477	Glycosyl hydrolase family 67 C-terminus
NIAKO_RS03670	PF00356	Bacterial regulatory proteins, lacI family
NIAKO_RS03680	PF03786	D-mannonate dehydratase (UxuA)
NIAKO_RS03685	PF00884	Sulfatase
NIAKO_RS03690	PF00486	Transcriptional regulatory protein, C terminal
NIAKO_RS03690	PF00072	Response regulator receiver domain
NIAKO_RS03695	PF08521	Two-component sensor kinase N-terminal
NIAKO_RS03695	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS03695	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS03700	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS03700	PF00593	TonB dependent receptor
NIAKO_RS03705	PF01569	PAP2 superfamily
NIAKO_RS03720	PF18370	Rhamnogalacturonan I lyases beta-sheet domain  
NIAKO_RS03730	PF00860	Permease family
NIAKO_RS03740	PF07980	SusD family
NIAKO_RS03745	PF00593	TonB dependent receptor
NIAKO_RS03745	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS03775	PF00722	Glycosyl hydrolases family 16
NIAKO_RS03785	PF12704	MacB-like periplasmic core domain
NIAKO_RS03785	PF00005	ABC transporter
NIAKO_RS03785	PF02687	FtsX-like permease family
NIAKO_RS03790	PF07690	Major Facilitator Superfamily
NIAKO_RS03805	PF00873	AcrB/AcrD/AcrF family
NIAKO_RS03825	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
NIAKO_RS03830	PF04264	YceI-like domain
NIAKO_RS03835	PF04264	YceI-like domain
NIAKO_RS03845	PF00950	ABC 3 transport family
NIAKO_RS03845	PF02742	Iron dependent repressor, metal binding and dimerisation domain
NIAKO_RS03875	PF02861	Clp amino terminal domain, pathogenicity island component
NIAKO_RS03875	PF10431	C-terminal, D2-small domain, of ClpB protein 
NIAKO_RS03875	PF17871	AAA lid domain
NIAKO_RS03875	PF00004	ATPase family associated with various cellular activities (AAA)
NIAKO_RS03875	PF07724	AAA domain (Cdc48 subfamily)
NIAKO_RS03880	PF03450	CO dehydrogenase flavoprotein C-terminal domain
NIAKO_RS03880	PF00941	FAD binding domain in molybdopterin dehydrogenase
NIAKO_RS03885	PF01315	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
NIAKO_RS03885	PF02738	Molybdopterin-binding domain of aldehyde dehydrogenase
NIAKO_RS03890	PF00111	2Fe-2S iron-sulfur cluster binding domain
NIAKO_RS03890	PF01799	[2Fe-2S] binding domain
NIAKO_RS03900	PF07075	Protein of unknown function (DUF1343)
NIAKO_RS03935	PF00675	Insulinase (Peptidase family M16)
NIAKO_RS03935	PF05193	Peptidase M16 inactive domain
NIAKO_RS03940	PF06964	Alpha-L-arabinofuranosidase C-terminal domain
NIAKO_RS03940	PF02018	Carbohydrate binding domain
NIAKO_RS03970	PF09924	Uncharacterised conserved protein (DUF2156)
NIAKO_RS03970	PF03706	Lysylphosphatidylglycerol synthase TM region
NIAKO_RS03975	PF12704	MacB-like periplasmic core domain
NIAKO_RS03975	PF02687	FtsX-like permease family
NIAKO_RS03990	PF00593	TonB dependent receptor
NIAKO_RS03990	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS03995	PF14322	Starch-binding associating with outer membrane
NIAKO_RS03995	PF07980	SusD family
NIAKO_RS04020	PF00030	Beta/Gamma crystallin
NIAKO_RS04035	PF01915	Glycosyl hydrolase family 3 C-terminal domain
NIAKO_RS04035	PF00933	Glycosyl hydrolase family 3 N terminal domain
NIAKO_RS04035	PF14310	Fibronectin type III-like domain
NIAKO_RS04050	PF01790	Prolipoprotein diacylglyceryl transferase
NIAKO_RS04060	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS04060	PF00593	TonB dependent receptor
NIAKO_RS04075	PF00085	Thioredoxin
NIAKO_RS04090	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
NIAKO_RS04095	PF00873	AcrB/AcrD/AcrF family
NIAKO_RS04115	PF01925	Sulfite exporter TauE/SafE
NIAKO_RS04120	PF00581	Rhodanese-like domain
NIAKO_RS04120	PF00753	Metallo-beta-lactamase superfamily
NIAKO_RS04135	PF00753	Metallo-beta-lactamase superfamily
NIAKO_RS04145	PF12833	Helix-turn-helix domain
NIAKO_RS04145	PF12625	Arabinose-binding domain of AraC transcription regulator, N-term
NIAKO_RS04160	PF00664	ABC transporter transmembrane region
NIAKO_RS04160	PF00005	ABC transporter
NIAKO_RS04160	PF03412	Peptidase C39 family
NIAKO_RS04205	PF00072	Response regulator receiver domain
NIAKO_RS04205	PF00196	Bacterial regulatory proteins, luxR family
NIAKO_RS04215	PF04397	LytTr DNA-binding domain
NIAKO_RS04215	PF00072	Response regulator receiver domain
NIAKO_RS04220	PF00881	Nitroreductase family
NIAKO_RS04230	PF00106	short chain dehydrogenase
NIAKO_RS04240	PF02525	Flavodoxin-like fold
NIAKO_RS04300	PF00106	short chain dehydrogenase
NIAKO_RS04305	PF12833	Helix-turn-helix domain
NIAKO_RS04305	PF02311	AraC-like ligand binding domain
NIAKO_RS04320	PF00005	ABC transporter
NIAKO_RS04325	PF01751	Toprim domain
NIAKO_RS04325	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS04325	PF00986	DNA gyrase B subunit, carboxyl terminus
NIAKO_RS04325	PF00204	DNA gyrase B
NIAKO_RS04340	PF00521	DNA gyrase/topoisomerase IV, subunit A
NIAKO_RS04350	PF01668	SmpB protein
NIAKO_RS04355	PF17848	Acetyl-coA carboxylase zinc finger domain
NIAKO_RS04355	PF01039	Carboxyl transferase domain
NIAKO_RS04365	PF00890	FAD binding domain
NIAKO_RS04365	PF02910	Fumarate reductase flavoprotein C-term
NIAKO_RS04370	PF13085	2Fe-2S iron-sulfur cluster binding domain
NIAKO_RS04380	PF12848	ABC transporter
NIAKO_RS04380	PF00005	ABC transporter
NIAKO_RS04405	PF06574	FAD synthetase
NIAKO_RS04405	PF01687	Riboflavin kinase
NIAKO_RS04410	PF02769	AIR synthase related protein, C-terminal domain
NIAKO_RS04410	PF00586	AIR synthase related protein, N-terminal domain
NIAKO_RS04415	PF08220	DeoR-like helix-turn-helix domain
NIAKO_RS04415	PF00455	DeoR C terminal sensor domain
NIAKO_RS04420	PF01476	LysM domain
NIAKO_RS04420	PF01520	N-acetylmuramoyl-L-alanine amidase
NIAKO_RS04430	PF00140	Sigma-70 factor, region 1.2
NIAKO_RS04430	PF04542	Sigma-70 region 2 
NIAKO_RS04430	PF03979	Sigma-70 factor, region 1.1
NIAKO_RS04430	PF04545	Sigma-70, region 4
NIAKO_RS04430	PF04539	Sigma-70 region 3
NIAKO_RS04440	PF07992	Pyridine nucleotide-disulphide oxidoreductase
NIAKO_RS04455	PF01554	MatE
NIAKO_RS04475	PF01812	5-formyltetrahydrofolate cyclo-ligase family
NIAKO_RS04480	PF02606	Tetraacyldisaccharide-1-P 4'-kinase
NIAKO_RS04485	PF00575	S1 RNA binding domain
NIAKO_RS04485	PF17876	Cold shock domain
NIAKO_RS04485	PF08206	Ribonuclease B OB domain
NIAKO_RS04485	PF00773	RNB domain
NIAKO_RS04490	PF00348	Polyprenyl synthetase
NIAKO_RS04495	PF13520	Amino acid permease
NIAKO_RS04510	PF00488	MutS domain V
NIAKO_RS04510	PF01713	Smr domain
NIAKO_RS04530	PF04264	YceI-like domain
NIAKO_RS04545	PF00398	Ribosomal RNA adenine dimethylase
NIAKO_RS04550	PF00474	Sodium:solute symporter family
NIAKO_RS04555	PF00701	Dihydrodipicolinate synthetase family
NIAKO_RS04580	PF02347	Glycine cleavage system P-protein
NIAKO_RS04590	PF04116	Fatty acid hydroxylase superfamily
NIAKO_RS04595	PF04116	Fatty acid hydroxylase superfamily
NIAKO_RS04605	PF00999	Sodium/hydrogen exchanger family
NIAKO_RS04605	PF02254	TrkA-N domain
NIAKO_RS04620	PF00291	Pyridoxal-phosphate dependent enzyme
NIAKO_RS04630	PF01712	Deoxynucleoside kinase
NIAKO_RS04635	PF01288	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
NIAKO_RS04640	PF01343	Peptidase family S49
NIAKO_RS04660	PF00593	TonB dependent receptor
NIAKO_RS04660	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS04685	PF00202	Aminotransferase class-III
NIAKO_RS04690	PF12680	SnoaL-like domain
NIAKO_RS04690	PF08281	Sigma-70, region 4
NIAKO_RS04690	PF04542	Sigma-70 region 2 
NIAKO_RS04710	PF08331	Domain of unknown function (DUF1730)
NIAKO_RS04715	PF12833	Helix-turn-helix domain
NIAKO_RS04715	PF02311	AraC-like ligand binding domain
NIAKO_RS04720	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
NIAKO_RS04720	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
NIAKO_RS04725	PF01261	Xylose isomerase-like TIM barrel
NIAKO_RS04730	PF00474	Sodium:solute symporter family
NIAKO_RS04770	PF00144	Beta-lactamase
NIAKO_RS04775	PF07724	AAA domain (Cdc48 subfamily)
NIAKO_RS04775	PF00004	ATPase family associated with various cellular activities (AAA)
NIAKO_RS04775	PF02861	Clp amino terminal domain, pathogenicity island component
NIAKO_RS04775	PF10431	C-terminal, D2-small domain, of ClpB protein 
NIAKO_RS04775	PF17871	AAA lid domain
NIAKO_RS04780	PF13462	Thioredoxin
NIAKO_RS04780	PF06965	Na+/H+ antiporter 1
NIAKO_RS04785	PF04116	Fatty acid hydroxylase superfamily
NIAKO_RS04800	PF01242	6-pyruvoyl tetrahydropterin synthase
NIAKO_RS04820	PF02887	Pyruvate kinase, alpha/beta domain
NIAKO_RS04820	PF00224	Pyruvate kinase, barrel domain
NIAKO_RS04820	PF00391	PEP-utilising enzyme, mobile domain
NIAKO_RS04825	PF00365	Phosphofructokinase
NIAKO_RS04830	PF04321	RmlD substrate binding domain
NIAKO_RS04845	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
NIAKO_RS04845	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
NIAKO_RS04845	PF02770	Acyl-CoA dehydrogenase, middle domain
NIAKO_RS04850	PF01168	Alanine racemase, N-terminal domain
NIAKO_RS04860	PF03950	tRNA synthetases class I (E and Q), anti-codon binding domain
NIAKO_RS04860	PF00749	tRNA synthetases class I (E and Q), catalytic domain
NIAKO_RS04865	PF01546	Peptidase family M20/M25/M40
NIAKO_RS04865	PF07687	Peptidase dimerisation domain
NIAKO_RS04875	PF01642	Methylmalonyl-CoA mutase
NIAKO_RS04875	PF02310	B12 binding domain
NIAKO_RS04885	PF01521	Iron-sulphur cluster biosynthesis
NIAKO_RS04900	PF00072	Response regulator receiver domain
NIAKO_RS04900	PF00486	Transcriptional regulatory protein, C terminal
NIAKO_RS04905	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS04905	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS04920	PF01522	Polysaccharide deacetylase
NIAKO_RS04925	PF07549	SecD/SecF GG Motif
NIAKO_RS04925	PF02355	Protein export membrane protein
NIAKO_RS04935	PF00155	Aminotransferase class I and II
NIAKO_RS04940	PF07944	Beta-L-arabinofuranosidase, GH127
NIAKO_RS04945	PF00753	Metallo-beta-lactamase superfamily
NIAKO_RS04950	PF01121	Dephospho-CoA kinase
NIAKO_RS04960	PF02699	Preprotein translocase subunit
NIAKO_RS04970	PF01029	NusB family
NIAKO_RS04975	PF00166	Chaperonin 10 Kd subunit
NIAKO_RS04980	PF00118	TCP-1/cpn60 chaperonin family
NIAKO_RS05025	PF01346	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
NIAKO_RS05025	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
NIAKO_RS05030	PF03313	Serine dehydratase alpha chain
NIAKO_RS05030	PF03315	Serine dehydratase beta chain
NIAKO_RS05035	PF04055	Radical SAM superfamily
NIAKO_RS05045	PF03825	Nucleoside H+ symporter
NIAKO_RS05050	PF00085	Thioredoxin
NIAKO_RS05055	PF07733	Bacterial DNA polymerase III alpha NTPase domain
NIAKO_RS05055	PF01336	OB-fold nucleic acid binding domain
NIAKO_RS05055	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
NIAKO_RS05055	PF02811	PHP domain
NIAKO_RS05055	PF14579	Helix-hairpin-helix motif
NIAKO_RS05080	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
NIAKO_RS05085	PF01625	Peptide methionine sulfoxide reductase
NIAKO_RS05100	PF00488	MutS domain V
NIAKO_RS05100	PF01713	Smr domain
NIAKO_RS05115	PF00391	PEP-utilising enzyme, mobile domain
NIAKO_RS05115	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
NIAKO_RS05120	PF00296	Luciferase-like monooxygenase
NIAKO_RS05155	PF00348	Polyprenyl synthetase
NIAKO_RS05215	PF07730	Histidine kinase
NIAKO_RS05220	PF00072	Response regulator receiver domain
NIAKO_RS05220	PF00196	Bacterial regulatory proteins, luxR family
NIAKO_RS05295	PF14659	Phage integrase, N-terminal SAM-like domain
NIAKO_RS05295	PF00589	Phage integrase family
NIAKO_RS05405	PF14659	Phage integrase, N-terminal SAM-like domain
NIAKO_RS05405	PF00589	Phage integrase family
NIAKO_RS05420	PF00248	Aldo/keto reductase family
NIAKO_RS05430	PF02525	Flavodoxin-like fold
NIAKO_RS05435	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
NIAKO_RS05435	PF03466	LysR substrate binding domain
NIAKO_RS05445	PF03352	Methyladenine glycosylase
NIAKO_RS05455	PF01207	Dihydrouridine synthase (Dus)
NIAKO_RS05465	PF05506	Domain of unknown function (DUF756)
NIAKO_RS05465	PF04185	Phosphoesterase family
NIAKO_RS05485	PF00593	TonB dependent receptor
NIAKO_RS05485	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS05535	PF00072	Response regulator receiver domain
NIAKO_RS05535	PF00196	Bacterial regulatory proteins, luxR family
NIAKO_RS05545	PF00072	Response regulator receiver domain
NIAKO_RS05545	PF00196	Bacterial regulatory proteins, luxR family
NIAKO_RS05550	PF01435	Peptidase family M48
NIAKO_RS05555	PF13087	AAA domain
NIAKO_RS05555	PF13195	Protein of unknown function (DUF4011)
NIAKO_RS05555	PF13086	AAA domain
NIAKO_RS05555	PF13086	AAA domain
NIAKO_RS05555	PF13195	Protein of unknown function (DUF4011)
NIAKO_RS05555	PF13087	AAA domain
NIAKO_RS05560	PF07730	Histidine kinase
NIAKO_RS05600	PF05221	S-adenosyl-L-homocysteine hydrolase
NIAKO_RS05600	PF00670	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
NIAKO_RS05605	PF02082	Transcriptional regulator
NIAKO_RS05610	PF00072	Response regulator receiver domain
NIAKO_RS05610	PF00196	Bacterial regulatory proteins, luxR family
NIAKO_RS05615	PF01113	Dihydrodipicolinate reductase, N-terminus
NIAKO_RS05615	PF05173	Dihydrodipicolinate reductase, C-terminus
NIAKO_RS05625	PF17762	HTH domain found in ParB protein
NIAKO_RS05625	PF02195	ParB-like nuclease domain
NIAKO_RS05630	PF13614	AAA domain
NIAKO_RS05640	PF03358	NADPH-dependent FMN reductase
NIAKO_RS05645	PF10518	TAT (twin-arginine translocation) pathway signal sequence
NIAKO_RS05645	PF00149	Calcineurin-like phosphoesterase
NIAKO_RS05670	PF00342	Phosphoglucose isomerase
NIAKO_RS05675	PF01212	Beta-eliminating lyase
NIAKO_RS05705	PF01738	Dienelactone hydrolase family
NIAKO_RS05710	PF08241	Methyltransferase domain
NIAKO_RS05715	PF00472	RF-1 domain
NIAKO_RS05715	PF03462	PCRF domain
NIAKO_RS05735	PF00171	Aldehyde dehydrogenase family
NIAKO_RS05740	PF00156	Phosphoribosyl transferase domain
NIAKO_RS05745	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
NIAKO_RS05745	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
NIAKO_RS05750	PF01467	Cytidylyltransferase-like
NIAKO_RS05755	PF03061	Thioesterase superfamily
NIAKO_RS05760	PF00293	NUDIX domain
NIAKO_RS05765	PF00156	Phosphoribosyl transferase domain
NIAKO_RS05800	PF04116	Fatty acid hydroxylase superfamily
NIAKO_RS05810	PF03030	Inorganic H+ pyrophosphatase
NIAKO_RS05820	PF12105	SpoU, rRNA methylase, C-terminal
NIAKO_RS05820	PF00588	SpoU rRNA Methylase family
NIAKO_RS05840	PF03631	Virulence factor BrkB
NIAKO_RS05845	PF02618	YceG-like family
NIAKO_RS05865	PF02954	Bacterial regulatory protein, Fis family
NIAKO_RS05865	PF00072	Response regulator receiver domain
NIAKO_RS05865	PF00158	Sigma-54 interaction domain
NIAKO_RS05870	PF04055	Radical SAM superfamily
NIAKO_RS05870	PF01938	TRAM domain
NIAKO_RS05870	PF00919	Uncharacterized protein family UPF0004
NIAKO_RS05875	PF04072	Leucine carboxyl methyltransferase
NIAKO_RS05880	PF01209	ubiE/COQ5 methyltransferase family
NIAKO_RS05885	PF02503	Polyphosphate kinase middle domain
NIAKO_RS05885	PF17941	Polyphosphate kinase C-terminal domain 1
NIAKO_RS05885	PF13089	Polyphosphate kinase N-terminal domain
NIAKO_RS05885	PF13090	Polyphosphate kinase C-terminal domain 2
NIAKO_RS05895	PF07690	Major Facilitator Superfamily
NIAKO_RS05910	PF00005	ABC transporter
NIAKO_RS05910	PF12704	MacB-like periplasmic core domain
NIAKO_RS05910	PF02687	FtsX-like permease family
NIAKO_RS05915	PF12704	MacB-like periplasmic core domain
NIAKO_RS05915	PF00005	ABC transporter
NIAKO_RS05915	PF02687	FtsX-like permease family
NIAKO_RS05930	PF12704	MacB-like periplasmic core domain
NIAKO_RS05930	PF02687	FtsX-like permease family
NIAKO_RS05935	PF02687	FtsX-like permease family
NIAKO_RS05935	PF12704	MacB-like periplasmic core domain
NIAKO_RS05935	PF00005	ABC transporter
NIAKO_RS05950	PF02954	Bacterial regulatory protein, Fis family
NIAKO_RS05950	PF00072	Response regulator receiver domain
NIAKO_RS05950	PF00158	Sigma-54 interaction domain
NIAKO_RS05955	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS05955	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS05970	PF01926	50S ribosome-binding GTPase
NIAKO_RS05970	PF06071	Protein of unknown function (DUF933)
NIAKO_RS05975	PF07670	Nucleoside recognition
NIAKO_RS05990	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS05990	PF00593	TonB dependent receptor
NIAKO_RS05995	PF00455	DeoR C terminal sensor domain
NIAKO_RS05995	PF08220	DeoR-like helix-turn-helix domain
NIAKO_RS06025	PF01520	N-acetylmuramoyl-L-alanine amidase
NIAKO_RS06025	PF11741	AMIN domain
NIAKO_RS06040	PF03167	Uracil DNA glycosylase superfamily
NIAKO_RS06055	PF00593	TonB dependent receptor
NIAKO_RS06055	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS06060	PF14322	Starch-binding associating with outer membrane
NIAKO_RS06060	PF07980	SusD family
NIAKO_RS06080	PF00072	Response regulator receiver domain
NIAKO_RS06100	PF01594	AI-2E family transporter
NIAKO_RS06110	PF11066	Protein of unknown function (DUF2867)
NIAKO_RS06110	PF13460	NAD(P)H-binding 
NIAKO_RS06120	PF03073	TspO/MBR family
NIAKO_RS06150	PF00703	Glycosyl hydrolases family 2
NIAKO_RS06150	PF02836	Glycosyl hydrolases family 2, TIM barrel domain
NIAKO_RS06150	PF02837	Glycosyl hydrolases family 2, sugar binding domain
NIAKO_RS06155	PF00271	Helicase conserved C-terminal domain
NIAKO_RS06155	PF00270	DEAD/DEAH box helicase
NIAKO_RS06165	PF03073	TspO/MBR family
NIAKO_RS06185	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
NIAKO_RS06185	PF01855	Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
NIAKO_RS06185	PF01558	Pyruvate ferredoxin/flavodoxin oxidoreductase
NIAKO_RS06185	PF10371	Domain of unknown function
NIAKO_RS06185	PF17147	Pyruvate:ferredoxin oxidoreductase core domain II
NIAKO_RS06190	PF07992	Pyridine nucleotide-disulphide oxidoreductase
NIAKO_RS06190	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
NIAKO_RS06195	PF01264	Chorismate synthase
NIAKO_RS06200	PF01292	Prokaryotic cytochrome b561
NIAKO_RS06205	PF00374	Nickel-dependent hydrogenase
NIAKO_RS06210	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
NIAKO_RS06210	PF14720	NiFe/NiFeSe hydrogenase small subunit C-terminal
NIAKO_RS06220	PF01155	Hydrogenase/urease nickel incorporation, metallochaperone, hypA
NIAKO_RS06225	PF02492	CobW/HypB/UreG, nucleotide-binding domain
NIAKO_RS06230	PF01300	Telomere recombination
NIAKO_RS06230	PF00708	Acylphosphatase
NIAKO_RS06230	PF17788	HypF Kae1-like domain
NIAKO_RS06230	PF07503	HypF finger
NIAKO_RS06235	PF01455	HupF/HypC family
NIAKO_RS06240	PF01924	Hydrogenase formation hypA family
NIAKO_RS06245	PF00586	AIR synthase related protein, N-terminal domain
NIAKO_RS06245	PF02769	AIR synthase related protein, C-terminal domain
NIAKO_RS06275	PF07980	SusD family
NIAKO_RS06280	PF00593	TonB dependent receptor
NIAKO_RS06280	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS06305	PF13419	Haloacid dehalogenase-like hydrolase
NIAKO_RS06325	PF01066	CDP-alcohol phosphatidyltransferase
NIAKO_RS06340	PF04608	Phosphatidylglycerophosphatase A
NIAKO_RS06350	PF01370	NAD dependent epimerase/dehydratase family
NIAKO_RS06360	PF00155	Aminotransferase class I and II
NIAKO_RS06380	PF02311	AraC-like ligand binding domain
NIAKO_RS06380	PF12833	Helix-turn-helix domain
NIAKO_RS06385	PF07494	Two component regulator propeller
NIAKO_RS06385	PF12833	Helix-turn-helix domain
NIAKO_RS06385	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS06385	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS06385	PF07495	Y_Y_Y domain
NIAKO_RS06385	PF00072	Response regulator receiver domain
NIAKO_RS06390	PF12833	Helix-turn-helix domain
NIAKO_RS06390	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS06390	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS06390	PF07494	Two component regulator propeller
NIAKO_RS06390	PF00072	Response regulator receiver domain
NIAKO_RS06390	PF12833	Helix-turn-helix domain
NIAKO_RS06390	PF07495	Y_Y_Y domain
NIAKO_RS06390	PF07495	Y_Y_Y domain
NIAKO_RS06390	PF00072	Response regulator receiver domain
NIAKO_RS06390	PF07494	Two component regulator propeller
NIAKO_RS06390	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS06390	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS06395	PF00593	TonB dependent receptor
NIAKO_RS06395	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS06400	PF07980	SusD family
NIAKO_RS06400	PF14322	Starch-binding associating with outer membrane
NIAKO_RS06405	PF04616	Glycosyl hydrolases family 43
NIAKO_RS06405	PF05270	Alpha-L-arabinofuranosidase B (ABFB) domain
NIAKO_RS06415	PF00005	ABC transporter
NIAKO_RS06415	PF12399	Branched-chain amino acid ATP-binding cassette transporter
NIAKO_RS06420	PF00005	ABC transporter
NIAKO_RS06425	PF01411	tRNA synthetases class II (A)
NIAKO_RS06425	PF02272	DHHA1 domain
NIAKO_RS06425	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
NIAKO_RS06430	PF13458	Periplasmic binding protein
NIAKO_RS06445	PF02653	Branched-chain amino acid transport system / permease component
NIAKO_RS06470	PF12697	Alpha/beta hydrolase family
NIAKO_RS06480	PF13302	Acetyltransferase (GNAT) domain
NIAKO_RS06500	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
NIAKO_RS06505	PF08240	Alcohol dehydrogenase GroES-like domain
NIAKO_RS06505	PF00107	Zinc-binding dehydrogenase
NIAKO_RS06515	PF00005	ABC transporter
NIAKO_RS06515	PF00664	ABC transporter transmembrane region
NIAKO_RS06520	PF00005	ABC transporter
NIAKO_RS06520	PF00664	ABC transporter transmembrane region
NIAKO_RS06555	PF02687	FtsX-like permease family
NIAKO_RS06555	PF00005	ABC transporter
NIAKO_RS06555	PF12704	MacB-like periplasmic core domain
NIAKO_RS06575	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS06575	PF00593	TonB dependent receptor
NIAKO_RS06595	PF07495	Y_Y_Y domain
NIAKO_RS06595	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS06595	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS06595	PF12833	Helix-turn-helix domain
NIAKO_RS06595	PF07495	Y_Y_Y domain
NIAKO_RS06595	PF07494	Two component regulator propeller
NIAKO_RS06595	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS06595	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS06595	PF00072	Response regulator receiver domain
NIAKO_RS06595	PF07494	Two component regulator propeller
NIAKO_RS06595	PF00072	Response regulator receiver domain
NIAKO_RS06595	PF12833	Helix-turn-helix domain
NIAKO_RS06600	PF00593	TonB dependent receptor
NIAKO_RS06600	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS06625	PF00795	Carbon-nitrogen hydrolase
NIAKO_RS06640	PF14322	Starch-binding associating with outer membrane
NIAKO_RS06640	PF07980	SusD family
NIAKO_RS06660	PF07980	SusD family
NIAKO_RS06660	PF14322	Starch-binding associating with outer membrane
NIAKO_RS06665	PF00593	TonB dependent receptor
NIAKO_RS06665	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS06680	PF02837	Glycosyl hydrolases family 2, sugar binding domain
NIAKO_RS06680	PF18368	Exo-beta-D-glucosaminidase Ig-fold domain
NIAKO_RS06680	PF00703	Glycosyl hydrolases family 2
NIAKO_RS06700	PF12833	Helix-turn-helix domain
NIAKO_RS06715	PF13488	Glycine zipper
NIAKO_RS06715	PF00691	OmpA family
NIAKO_RS06745	PF01738	Dienelactone hydrolase family
NIAKO_RS06765	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS06765	PF00593	TonB dependent receptor
NIAKO_RS06770	PF14322	Starch-binding associating with outer membrane
NIAKO_RS06770	PF07980	SusD family
NIAKO_RS06775	PF00884	Sulfatase
NIAKO_RS06810	PF00578	AhpC/TSA family
NIAKO_RS06820	PF00593	TonB dependent receptor
NIAKO_RS06820	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS06830	PF04542	Sigma-70 region 2 
NIAKO_RS06830	PF08281	Sigma-70, region 4
NIAKO_RS06850	PF11799	impB/mucB/samB family C-terminal domain
NIAKO_RS06850	PF00817	impB/mucB/samB family
NIAKO_RS06870	PF07730	Histidine kinase
NIAKO_RS06870	PF17200	Single Cache domain 2
NIAKO_RS06875	PF00072	Response regulator receiver domain
NIAKO_RS06875	PF00196	Bacterial regulatory proteins, luxR family
NIAKO_RS06885	PF05593	RHS Repeat
NIAKO_RS06885	PF03527	RHS protein
NIAKO_RS06910	PF00196	Bacterial regulatory proteins, luxR family
NIAKO_RS06910	PF00072	Response regulator receiver domain
NIAKO_RS06930	PF00392	Bacterial regulatory proteins, gntR family
NIAKO_RS06930	PF07729	FCD domain
NIAKO_RS06935	PF07690	Major Facilitator Superfamily
NIAKO_RS06940	PF01212	Beta-eliminating lyase
NIAKO_RS06950	PF03631	Virulence factor BrkB
NIAKO_RS06960	PF00141	Peroxidase
NIAKO_RS06965	PF01556	DnaJ C terminal domain
NIAKO_RS06965	PF00226	DnaJ domain
NIAKO_RS06970	PF00085	Thioredoxin
NIAKO_RS06975	PF00313	'Cold-shock' DNA-binding domain
NIAKO_RS06980	PF00270	DEAD/DEAH box helicase
NIAKO_RS06980	PF00271	Helicase conserved C-terminal domain
NIAKO_RS06990	PF13462	Thioredoxin
NIAKO_RS06990	PF06965	Na+/H+ antiporter 1
NIAKO_RS07010	PF10114	Sensory domain found in PocR
NIAKO_RS07010	PF12833	Helix-turn-helix domain
NIAKO_RS07015	PF00106	short chain dehydrogenase
NIAKO_RS07035	PF00561	alpha/beta hydrolase fold
NIAKO_RS07045	PF03781	Sulfatase-modifying factor enzyme 1
NIAKO_RS07050	PF00654	Voltage gated chloride channel
NIAKO_RS07060	PF01638	HxlR-like helix-turn-helix
NIAKO_RS07090	PF07739	TipAS antibiotic-recognition domain
NIAKO_RS07090	PF13411	MerR HTH family regulatory protein
NIAKO_RS07100	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal  
NIAKO_RS07100	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
NIAKO_RS07115	PF03330	Lytic transglycolase
NIAKO_RS07125	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
NIAKO_RS07125	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal  
NIAKO_RS07130	PF00076	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
NIAKO_RS07170	PF12708	Pectate lyase superfamily protein
NIAKO_RS07170	PF09992	Phosphodiester glycosidase
NIAKO_RS07175	PF12833	Helix-turn-helix domain
NIAKO_RS07185	PF13533	Biotin-lipoyl like
NIAKO_RS07205	PF00474	Sodium:solute symporter family
NIAKO_RS07215	PF00593	TonB dependent receptor
NIAKO_RS07215	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS07220	PF14322	Starch-binding associating with outer membrane
NIAKO_RS07220	PF07980	SusD family
NIAKO_RS07245	PF16874	Glycosyl hydrolase family 36 C-terminal domain
NIAKO_RS07245	PF16875	Glycosyl hydrolase family 36 N-terminal domain
NIAKO_RS07250	PF13593	SBF-like CPA transporter family (DUF4137)
NIAKO_RS07255	PF02900	Catalytic LigB subunit of aromatic ring-opening dioxygenase
NIAKO_RS07285	PF07694	5TMR of 5TMR-LYT
NIAKO_RS07285	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS07285	PF06580	Histidine kinase
NIAKO_RS07290	PF00072	Response regulator receiver domain
NIAKO_RS07290	PF04397	LytTr DNA-binding domain
NIAKO_RS07305	PF06250	YhcG PDDEXK nuclease domain
NIAKO_RS07305	PF17761	DUF1016 N-terminal domain
NIAKO_RS07310	PF01389	OmpA-like transmembrane domain
NIAKO_RS07310	PF00691	OmpA family
NIAKO_RS07340	PF00072	Response regulator receiver domain
NIAKO_RS07340	PF00196	Bacterial regulatory proteins, luxR family
NIAKO_RS07345	PF17200	Single Cache domain 2
NIAKO_RS07345	PF07730	Histidine kinase
NIAKO_RS07365	PF05736	OprF membrane domain
NIAKO_RS07365	PF00691	OmpA family
NIAKO_RS07385	PF00486	Transcriptional regulatory protein, C terminal
NIAKO_RS07385	PF00072	Response regulator receiver domain
NIAKO_RS07405	PF01022	Bacterial regulatory protein, arsR family
NIAKO_RS07410	PF07690	Major Facilitator Superfamily
NIAKO_RS07420	PF00248	Aldo/keto reductase family
NIAKO_RS07440	PF17936	Bacterial Ig domain
NIAKO_RS07440	PF00082	Subtilase family
NIAKO_RS07450	PF00171	Aldehyde dehydrogenase family
NIAKO_RS07460	PF00491	Arginase family
NIAKO_RS07470	PF16327	Cytochrome c-type biogenesis protein CcmF C-terminal
NIAKO_RS07470	PF01578	Cytochrome C assembly protein
NIAKO_RS07480	PF00294	pfkB family carbohydrate kinase
NIAKO_RS07480	PF01467	Cytidylyltransferase-like
NIAKO_RS07490	PF02261	Aspartate decarboxylase
NIAKO_RS07495	PF02569	Pantoate-beta-alanine ligase
NIAKO_RS07500	PF00534	Glycosyl transferases group 1
NIAKO_RS07500	PF08323	Starch synthase catalytic domain
NIAKO_RS07505	PF02773	S-adenosylmethionine synthetase, C-terminal domain
NIAKO_RS07505	PF02772	S-adenosylmethionine synthetase, central domain
NIAKO_RS07505	PF00438	S-adenosylmethionine synthetase, N-terminal domain
NIAKO_RS07515	PF00293	NUDIX domain
NIAKO_RS07520	PF08032	RNA 2'-O ribose methyltransferase substrate binding
NIAKO_RS07520	PF00588	SpoU rRNA Methylase family
NIAKO_RS07535	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
NIAKO_RS07550	PF00155	Aminotransferase class I and II
NIAKO_RS07560	PF01804	Penicillin amidase
NIAKO_RS07580	PF12368	Rhodanase C-terminal
NIAKO_RS07580	PF17773	UPF0176 acylphosphatase like domain
NIAKO_RS07580	PF00581	Rhodanese-like domain
NIAKO_RS07585	PF10282	Lactonase, 7-bladed beta-propeller
NIAKO_RS07600	PF01259	SAICAR synthetase
NIAKO_RS07610	PF00005	ABC transporter
NIAKO_RS07610	PF02687	FtsX-like permease family
NIAKO_RS07610	PF12704	MacB-like periplasmic core domain
NIAKO_RS07615	PF00005	ABC transporter
NIAKO_RS07625	PF01389	OmpA-like transmembrane domain
NIAKO_RS07625	PF00691	OmpA family
NIAKO_RS07645	PF13183	4Fe-4S dicluster domain
NIAKO_RS07645	PF02665	Nitrate reductase gamma subunit
NIAKO_RS07645	PF02754	Cysteine-rich domain
NIAKO_RS07660	PF02801	Beta-ketoacyl synthase, C-terminal domain
NIAKO_RS07660	PF00109	Beta-ketoacyl synthase, N-terminal domain
NIAKO_RS07675	PF01977	3-octaprenyl-4-hydroxybenzoate carboxy-lyase
NIAKO_RS07680	PF12704	MacB-like periplasmic core domain
NIAKO_RS07680	PF02687	FtsX-like permease family
NIAKO_RS07690	PF00923	Transaldolase/Fructose-6-phosphate aldolase
NIAKO_RS07705	PF02463	RecF/RecN/SMC N terminal domain
NIAKO_RS07705	PF06470	SMC proteins Flexible Hinge Domain
NIAKO_RS07745	PF02735	Ku70/Ku80 beta-barrel domain
NIAKO_RS07755	PF13298	DNA polymerase Ligase (LigD)
NIAKO_RS07755	PF01068	ATP dependent DNA ligase domain
NIAKO_RS07755	PF04679	ATP dependent DNA ligase C terminal region        
NIAKO_RS07760	PF00561	alpha/beta hydrolase fold
NIAKO_RS07775	PF00561	alpha/beta hydrolase fold
NIAKO_RS07785	PF00108	Thiolase, N-terminal domain
NIAKO_RS07785	PF02803	Thiolase, C-terminal domain
NIAKO_RS07795	PF13673	Acetyltransferase (GNAT) domain
NIAKO_RS07800	PF00436	Single-strand binding protein family
NIAKO_RS07810	PF00072	Response regulator receiver domain
NIAKO_RS07810	PF04397	LytTr DNA-binding domain
NIAKO_RS07825	PF02779	Transketolase, pyrimidine binding domain
NIAKO_RS07825	PF02780	Transketolase, C-terminal domain
NIAKO_RS07825	PF00364	Biotin-requiring enzyme
NIAKO_RS07830	PF16295	Tetracyclin repressor-like, C-terminal domain
NIAKO_RS07830	PF00440	Bacterial regulatory proteins, tetR family
NIAKO_RS07840	PF13533	Biotin-lipoyl like
NIAKO_RS07845	PF07690	Major Facilitator Superfamily
NIAKO_RS07860	PF02954	Bacterial regulatory protein, Fis family
NIAKO_RS07860	PF00158	Sigma-54 interaction domain
NIAKO_RS07860	PF00072	Response regulator receiver domain
NIAKO_RS07865	PF02607	B12 binding domain
NIAKO_RS07865	PF13411	MerR HTH family regulatory protein
NIAKO_RS07870	PF10502	Signal peptidase, peptidase S26 
NIAKO_RS07875	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
NIAKO_RS07875	PF08211	Cytidine and deoxycytidylate deaminase zinc-binding region 
NIAKO_RS07885	PF00111	2Fe-2S iron-sulfur cluster binding domain
NIAKO_RS07890	PF00107	Zinc-binding dehydrogenase
NIAKO_RS07890	PF08240	Alcohol dehydrogenase GroES-like domain
NIAKO_RS07895	PF01661	Macro domain
NIAKO_RS07900	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
NIAKO_RS07900	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
NIAKO_RS07905	PF01588	Putative tRNA binding domain
NIAKO_RS07910	PF02566	OsmC-like protein
NIAKO_RS07920	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
NIAKO_RS07920	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
NIAKO_RS07935	PF01751	Toprim domain
NIAKO_RS07935	PF13368	Topoisomerase C-terminal repeat
NIAKO_RS07935	PF01131	DNA topoisomerase
NIAKO_RS07940	PF02682	Carboxyltransferase domain, subdomain C and D
NIAKO_RS07945	PF02626	Carboxyltransferase domain, subdomain A and B 
NIAKO_RS07950	PF03746	LamB/YcsF family
NIAKO_RS07955	PF01566	Natural resistance-associated macrophage protein
NIAKO_RS07980	PF04286	Protein of unknown function (DUF445)
NIAKO_RS07990	PF11818	C-terminal domain of tail specific protease (DUF3340)
NIAKO_RS07990	PF00595	PDZ domain
NIAKO_RS07990	PF03572	Peptidase family S41
NIAKO_RS07990	PF17804	Tail specific protease N-terminal domain
NIAKO_RS08005	PF02545	Maf-like protein
NIAKO_RS08015	PF00535	Glycosyl transferase family 2
NIAKO_RS08045	PF00593	TonB dependent receptor
NIAKO_RS08045	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS08055	PF01638	HxlR-like helix-turn-helix
NIAKO_RS08075	PF00924	Mechanosensitive ion channel
NIAKO_RS08085	PF00890	FAD binding domain
NIAKO_RS08090	PF00072	Response regulator receiver domain
NIAKO_RS08090	PF13426	PAS domain
NIAKO_RS08090	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS08090	PF08448	PAS fold
NIAKO_RS08090	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS08120	PF05726	Pirin C-terminal cupin domain
NIAKO_RS08120	PF02678	Pirin
NIAKO_RS08140	PF10555	Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 
NIAKO_RS08140	PF00953	Glycosyl transferase family 4
NIAKO_RS08145	PF01161	Phosphatidylethanolamine-binding protein
NIAKO_RS08165	PF00593	TonB dependent receptor
NIAKO_RS08165	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS08170	PF14322	Starch-binding associating with outer membrane
NIAKO_RS08170	PF07980	SusD family
NIAKO_RS08175	PF10566	Glycoside hydrolase 97  
NIAKO_RS08175	PF14509	Glycosyl-hydrolase 97 C-terminal, oligomerisation
NIAKO_RS08175	PF14508	Glycosyl-hydrolase 97 N-terminal
NIAKO_RS08230	PF13229	Right handed beta helix region
NIAKO_RS08230	PF12708	Pectate lyase superfamily protein
NIAKO_RS08230	PF00353	RTX calcium-binding nonapeptide repeat (4 copies)
NIAKO_RS08235	PF00270	DEAD/DEAH box helicase
NIAKO_RS08235	PF00271	Helicase conserved C-terminal domain
NIAKO_RS08265	PF01070	FMN-dependent dehydrogenase
NIAKO_RS08295	PF01872	RibD C-terminal domain
NIAKO_RS08300	PF00076	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
NIAKO_RS08320	PF00266	Aminotransferase class-V
NIAKO_RS08465	PF06736	Protein of unknown function (DUF1211)
NIAKO_RS08470	PF07930	D-aminopeptidase, domain B
NIAKO_RS08470	PF00144	Beta-lactamase
NIAKO_RS08475	PF12833	Helix-turn-helix domain
NIAKO_RS08475	PF00072	Response regulator receiver domain
NIAKO_RS08485	PF00248	Aldo/keto reductase family
NIAKO_RS08500	PF00106	short chain dehydrogenase
NIAKO_RS08505	PF06463	Molybdenum Cofactor Synthesis C
NIAKO_RS08505	PF04055	Radical SAM superfamily
NIAKO_RS08530	PF07730	Histidine kinase
NIAKO_RS08535	PF00072	Response regulator receiver domain
NIAKO_RS08535	PF00196	Bacterial regulatory proteins, luxR family
NIAKO_RS08550	PF01590	GAF domain
NIAKO_RS08550	PF00158	Sigma-54 interaction domain
NIAKO_RS08560	PF00158	Sigma-54 interaction domain
NIAKO_RS08560	PF01590	GAF domain
NIAKO_RS08580	PF00486	Transcriptional regulatory protein, C terminal
NIAKO_RS08580	PF00072	Response regulator receiver domain
NIAKO_RS08585	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS08585	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS08605	PF07980	SusD family
NIAKO_RS08605	PF14322	Starch-binding associating with outer membrane
NIAKO_RS08610	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS08610	PF00593	TonB dependent receptor
NIAKO_RS08625	PF03442	Carbohydrate binding domain X2
NIAKO_RS08625	PF00942	Cellulose binding domain
NIAKO_RS08630	PF02566	OsmC-like protein
NIAKO_RS08635	PF12833	Helix-turn-helix domain
NIAKO_RS08640	PF12146	Serine aminopeptidase, S33
NIAKO_RS08645	PF01641	SelR domain
NIAKO_RS08665	PF04264	YceI-like domain
NIAKO_RS08675	PF02463	RecF/RecN/SMC N terminal domain
NIAKO_RS08680	PF12705	PD-(D/E)XK nuclease superfamily
NIAKO_RS08680	PF13361	UvrD-like helicase C-terminal domain
NIAKO_RS08680	PF00580	UvrD/REP helicase N-terminal domain
NIAKO_RS08705	PF00069	Protein kinase domain
NIAKO_RS08705	PF13360	PQQ-like domain
NIAKO_RS08745	PF00072	Response regulator receiver domain
NIAKO_RS08785	PF12833	Helix-turn-helix domain
NIAKO_RS08790	PF00106	short chain dehydrogenase
NIAKO_RS08825	PF00106	short chain dehydrogenase
NIAKO_RS08855	PF05360	yiaA/B two helix domain
NIAKO_RS08865	PF00072	Response regulator receiver domain
NIAKO_RS08865	PF04397	LytTr DNA-binding domain
NIAKO_RS08870	PF00072	Response regulator receiver domain
NIAKO_RS08870	PF00196	Bacterial regulatory proteins, luxR family
NIAKO_RS08875	PF17200	Single Cache domain 2
NIAKO_RS08875	PF07730	Histidine kinase
NIAKO_RS08890	PF03831	PhnA domain
NIAKO_RS08890	PF08274	PhnA Zinc-Ribbon 
NIAKO_RS08900	PF03853	YjeF-related protein N-terminus
NIAKO_RS08900	PF01256	Carbohydrate kinase
NIAKO_RS08905	PF00144	Beta-lactamase
NIAKO_RS08905	PF11954	Domain of unknown function (DUF3471)
NIAKO_RS08910	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
NIAKO_RS08910	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
NIAKO_RS08910	PF01842	ACT domain
NIAKO_RS08925	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
NIAKO_RS08925	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
NIAKO_RS08955	PF10071	Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310)
NIAKO_RS08960	PF01979	Amidohydrolase family
NIAKO_RS08970	PF06039	Malate:quinone oxidoreductase (Mqo)
NIAKO_RS09010	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS09010	PF00593	TonB dependent receptor
NIAKO_RS09040	PF00041	Fibronectin type III domain
NIAKO_RS09040	PF00704	Glycosyl hydrolases family 18
NIAKO_RS09080	PF00486	Transcriptional regulatory protein, C terminal
NIAKO_RS09080	PF00072	Response regulator receiver domain
NIAKO_RS09090	PF03358	NADPH-dependent FMN reductase
NIAKO_RS09090	PF01566	Natural resistance-associated macrophage protein
NIAKO_RS09115	PF04238	Protein of unknown function (DUF420)
NIAKO_RS09120	PF00440	Bacterial regulatory proteins, tetR family
NIAKO_RS09120	PF08361	MAATS-type transcriptional repressor, C-terminal region
NIAKO_RS09125	PF00654	Voltage gated chloride channel
NIAKO_RS09145	PF00072	Response regulator receiver domain
NIAKO_RS09145	PF00486	Transcriptional regulatory protein, C terminal
NIAKO_RS09150	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS09150	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS09150	PF00989	PAS fold
NIAKO_RS09150	PF16736	Single Cache-like 
NIAKO_RS09160	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS09160	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS09165	PF00690	Cation transporter/ATPase, N-terminus
NIAKO_RS09165	PF00689	Cation transporting ATPase, C-terminus
NIAKO_RS09170	PF00072	Response regulator receiver domain
NIAKO_RS09170	PF00486	Transcriptional regulatory protein, C terminal
NIAKO_RS09175	PF00294	pfkB family carbohydrate kinase
NIAKO_RS09195	PF05139	Erythromycin esterase
NIAKO_RS09195	PF00156	Phosphoribosyl transferase domain
NIAKO_RS09225	PF00005	ABC transporter
NIAKO_RS09230	PF02405	Permease MlaE
NIAKO_RS09250	PF00391	PEP-utilising enzyme, mobile domain
NIAKO_RS09250	PF02896	PEP-utilising enzyme, TIM barrel domain
NIAKO_RS09250	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
NIAKO_RS09255	PF00011	Hsp20/alpha crystallin family
NIAKO_RS09260	PF02405	Permease MlaE
NIAKO_RS09265	PF00005	ABC transporter
NIAKO_RS09275	PF08240	Alcohol dehydrogenase GroES-like domain
NIAKO_RS09275	PF00107	Zinc-binding dehydrogenase
NIAKO_RS09285	PF00689	Cation transporting ATPase, C-terminus
NIAKO_RS09285	PF00690	Cation transporter/ATPase, N-terminus
NIAKO_RS09300	PF00343	Carbohydrate phosphorylase
NIAKO_RS09300	PF11897	Protein of unknown function (DUF3417)
NIAKO_RS09325	PF02424	ApbE family
NIAKO_RS09345	PF02163	Peptidase family M50
NIAKO_RS09345	PF00571	CBS domain
NIAKO_RS09350	PF17862	AAA+ lid domain
NIAKO_RS09350	PF01434	Peptidase family M41
NIAKO_RS09350	PF00004	ATPase family associated with various cellular activities (AAA)
NIAKO_RS09360	PF00005	ABC transporter
NIAKO_RS09365	PF12704	MacB-like periplasmic core domain
NIAKO_RS09375	PF00884	Sulfatase
NIAKO_RS09375	PF05592	Bacterial alpha-L-rhamnosidase concanavalin-like domain
NIAKO_RS09375	PF16347	Domain of unknown function (DUF4976)
NIAKO_RS09375	PF17389	Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain
NIAKO_RS09375	PF17390	Bacterial alpha-L-rhamnosidase C-terminal domain
NIAKO_RS09380	PF16347	Domain of unknown function (DUF4976)
NIAKO_RS09380	PF00884	Sulfatase
NIAKO_RS09395	PF01522	Polysaccharide deacetylase
NIAKO_RS09400	PF00535	Glycosyl transferase family 2
NIAKO_RS09410	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
NIAKO_RS09410	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
NIAKO_RS09420	PF02837	Glycosyl hydrolases family 2, sugar binding domain
NIAKO_RS09420	PF02837	Glycosyl hydrolases family 2, sugar binding domain
NIAKO_RS09470	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS09470	PF00593	TonB dependent receptor
NIAKO_RS09480	PF02627	Carboxymuconolactone decarboxylase family
NIAKO_RS09525	PF06969	HemN C-terminal domain
NIAKO_RS09525	PF04055	Radical SAM superfamily
NIAKO_RS09535	PF00486	Transcriptional regulatory protein, C terminal
NIAKO_RS09535	PF00072	Response regulator receiver domain
NIAKO_RS09540	PF00403	Heavy-metal-associated domain
NIAKO_RS09545	PF00115	Cytochrome C and Quinol oxidase polypeptide I
NIAKO_RS09555	PF14715	N-terminal domain of cytochrome oxidase-cbb3, FixP 
NIAKO_RS09555	PF00034	Cytochrome c
NIAKO_RS09555	PF13442	Cytochrome C oxidase, cbb3-type, subunit III 
NIAKO_RS09560	PF11614	IG-like fold at C-terminal of FixG, putative oxidoreductase
NIAKO_RS09560	PF12801	4Fe-4S binding domain
NIAKO_RS09560	PF13746	4Fe-4S dicluster domain
NIAKO_RS09575	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS09575	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS09580	PF01814	Hemerythrin HHE cation binding domain
NIAKO_RS09580	PF04405	Domain of Unknown function (DUF542)  
NIAKO_RS09610	PF01734	Patatin-like phospholipase
NIAKO_RS09615	PF03632	Glycosyl hydrolase family 65 central catalytic domain
NIAKO_RS09615	PF03633	Glycosyl hydrolase family 65, C-terminal domain 
NIAKO_RS09615	PF03636	Glycosyl hydrolase family 65, N-terminal domain 
NIAKO_RS09620	PF03575	Peptidase family S51
NIAKO_RS09660	PF00005	ABC transporter
NIAKO_RS09660	PF08402	TOBE domain
NIAKO_RS09665	PF00528	Binding-protein-dependent transport system inner membrane component
NIAKO_RS09690	PF07980	SusD family
NIAKO_RS09690	PF14322	Starch-binding associating with outer membrane
NIAKO_RS09760	PF00892	EamA-like transporter family
NIAKO_RS09765	PF14602	Hexapeptide repeat of succinyl-transferase
NIAKO_RS09765	PF14805	Tetrahydrodipicolinate N-succinyltransferase N-terminal
NIAKO_RS09765	PF00132	Bacterial transferase hexapeptide (six repeats)
NIAKO_RS09780	PF01300	Telomere recombination
NIAKO_RS09790	PF00571	CBS domain
NIAKO_RS09790	PF01368	DHH family
NIAKO_RS09790	PF02272	DHHA1 domain
NIAKO_RS09790	PF01743	Poly A polymerase head domain
NIAKO_RS09820	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS09820	PF00593	TonB dependent receptor
NIAKO_RS09845	PF09180	Prolyl-tRNA synthetase, C-terminal
NIAKO_RS09845	PF03129	Anticodon binding domain
NIAKO_RS09845	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
NIAKO_RS09880	PF17863	AAA lid domain
NIAKO_RS09880	PF07726	ATPase family associated with various cellular activities (AAA)
NIAKO_RS09890	PF01509	TruB family pseudouridylate synthase (N terminal domain)
NIAKO_RS09900	PF08032	RNA 2'-O ribose methyltransferase substrate binding
NIAKO_RS09900	PF00588	SpoU rRNA Methylase family
NIAKO_RS09925	PF00334	Nucleoside diphosphate kinase
NIAKO_RS09935	PF02272	DHHA1 domain
NIAKO_RS09935	PF01368	DHH family
NIAKO_RS09940	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
NIAKO_RS09940	PF01346	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
NIAKO_RS09945	PF00809	Pterin binding enzyme
NIAKO_RS09955	PF00528	Binding-protein-dependent transport system inner membrane component
NIAKO_RS09965	PF00484	Carbonic anhydrase
NIAKO_RS09975	PF02463	RecF/RecN/SMC N terminal domain
NIAKO_RS09980	PF00676	Dehydrogenase E1 component
NIAKO_RS09990	PF00885	6,7-dimethyl-8-ribityllumazine synthase
NIAKO_RS09995	PF02754	Cysteine-rich domain
NIAKO_RS10000	PF01346	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
NIAKO_RS10000	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
NIAKO_RS10005	PF01145	SPFH domain / Band 7 family
NIAKO_RS10005	PF16200	C-terminal region of band_7
NIAKO_RS10015	PF00849	RNA pseudouridylate synthase
NIAKO_RS10015	PF01479	S4 domain
NIAKO_RS10020	PF01872	RibD C-terminal domain
NIAKO_RS10025	PF00849	RNA pseudouridylate synthase
NIAKO_RS10050	PF04397	LytTr DNA-binding domain
NIAKO_RS10050	PF00072	Response regulator receiver domain
NIAKO_RS10060	PF00106	short chain dehydrogenase
NIAKO_RS10100	PF02469	Fasciclin domain
NIAKO_RS10110	PF12034	Domain of unknown function (DUF3520)
NIAKO_RS10110	PF00092	von Willebrand factor type A domain
NIAKO_RS10110	PF12450	von Willebrand factor 
NIAKO_RS10120	PF02146	Sir2 family
NIAKO_RS10150	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS10150	PF00672	HAMP domain
NIAKO_RS10150	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS10160	PF00521	DNA gyrase/topoisomerase IV, subunit A
NIAKO_RS10160	PF03989	DNA gyrase C-terminal domain, beta-propeller
NIAKO_RS10195	PF00005	ABC transporter
NIAKO_RS10195	PF00664	ABC transporter transmembrane region
NIAKO_RS10205	PF02685	Glucokinase
NIAKO_RS10240	PF16355	Domain of unknown function (DUF4982)
NIAKO_RS10240	PF02837	Glycosyl hydrolases family 2, sugar binding domain
NIAKO_RS10240	PF00703	Glycosyl hydrolases family 2
NIAKO_RS10240	PF18565	Glycoside hydrolase family 2 C-terminal domain 5
NIAKO_RS10240	PF02836	Glycosyl hydrolases family 2, TIM barrel domain
NIAKO_RS10260	PF06463	Molybdenum Cofactor Synthesis C
NIAKO_RS10260	PF04055	Radical SAM superfamily
NIAKO_RS10280	PF01925	Sulfite exporter TauE/SafE
NIAKO_RS10290	PF02875	Mur ligase family, glutamate ligase domain
NIAKO_RS10290	PF08245	Mur ligase middle domain
NIAKO_RS10295	PF00293	NUDIX domain
NIAKO_RS10300	PF12867	DinB superfamily
NIAKO_RS10305	PF00005	ABC transporter
NIAKO_RS10315	PF00316	Fructose-1-6-bisphosphatase, N-terminal domain
NIAKO_RS10320	PF01842	ACT domain
NIAKO_RS10320	PF00696	Amino acid kinase family
NIAKO_RS10330	PF01624	MutS domain I
NIAKO_RS10330	PF00488	MutS domain V
NIAKO_RS10330	PF05188	MutS domain II
NIAKO_RS10330	PF05192	MutS domain III
NIAKO_RS10330	PF05190	MutS family domain IV
NIAKO_RS10340	PF00012	Hsp70 protein
NIAKO_RS10365	PF12833	Helix-turn-helix domain
NIAKO_RS10365	PF02311	AraC-like ligand binding domain
NIAKO_RS10370	PF06965	Na+/H+ antiporter 1
NIAKO_RS10370	PF13462	Thioredoxin
NIAKO_RS10385	PF03485	Arginyl tRNA synthetase N terminal domain
NIAKO_RS10385	PF05746	DALR anticodon binding domain
NIAKO_RS10385	PF00750	tRNA synthetases class I (R)
NIAKO_RS10395	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
NIAKO_RS10395	PF02806	Alpha amylase, C-terminal all-beta domain
NIAKO_RS10395	PF00128	Alpha amylase, catalytic domain
NIAKO_RS10425	PF00691	OmpA family
NIAKO_RS10425	PF13677	Membrane MotB of proton-channel complex MotA/MotB 
NIAKO_RS10470	PF17763	Glutaminase/Asparaginase C-terminal domain
NIAKO_RS10470	PF00710	Asparaginase, N-terminal
NIAKO_RS10475	PF10415	Fumarase C C-terminus
NIAKO_RS10475	PF00206	Lyase
NIAKO_RS10500	PF04960	Glutaminase
NIAKO_RS10520	PF00691	OmpA family
NIAKO_RS10520	PF13677	Membrane MotB of proton-channel complex MotA/MotB 
NIAKO_RS10540	PF06441	Epoxide hydrolase N terminus
NIAKO_RS10585	PF00128	Alpha amylase, catalytic domain
NIAKO_RS10585	PF10438	Cyclo-malto-dextrinase C-terminal domain
NIAKO_RS10585	PF09087	Cyclomaltodextrinase, N-terminal
NIAKO_RS10595	PF00483	Nucleotidyl transferase
NIAKO_RS10600	PF00534	Glycosyl transferases group 1
NIAKO_RS10600	PF08323	Starch synthase catalytic domain
NIAKO_RS10610	PF00480	ROK family
NIAKO_RS10620	PF04055	Radical SAM superfamily
NIAKO_RS10690	PF00121	Triosephosphate isomerase
NIAKO_RS10695	PF12804	MobA-like NTP transferase domain
NIAKO_RS10695	PF00132	Bacterial transferase hexapeptide (six repeats)
NIAKO_RS10700	PF01197	Ribosomal protein L31
NIAKO_RS10705	PF04461	Protein of unknown function (DUF520)
NIAKO_RS10725	PF01790	Prolipoprotein diacylglyceryl transferase
NIAKO_RS10730	PF06491	Disulphide isomerase
NIAKO_RS10735	PF00011	Hsp20/alpha crystallin family
NIAKO_RS10750	PF17810	Arginine decarboxylase helical bundle domain
NIAKO_RS10750	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
NIAKO_RS10750	PF17944	Arginine decarboxylase C-terminal helical extension
NIAKO_RS10755	PF00453	Ribosomal protein L20
NIAKO_RS10760	PF01632	Ribosomal protein L35
NIAKO_RS10765	PF00707	Translation initiation factor IF-3, C-terminal domain
NIAKO_RS10765	PF05198	Translation initiation factor IF-3, N-terminal domain
NIAKO_RS10770	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
NIAKO_RS10770	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
NIAKO_RS10770	PF02824	TGS domain
NIAKO_RS10770	PF03129	Anticodon binding domain
NIAKO_RS10800	PF12848	ABC transporter
NIAKO_RS10800	PF00005	ABC transporter
NIAKO_RS10810	PF01734	Patatin-like phospholipase
NIAKO_RS10825	PF01979	Amidohydrolase family
NIAKO_RS10830	PF00982	Glycosyltransferase family 20
NIAKO_RS10840	PF17391	Urocanase N-terminal domain
NIAKO_RS10840	PF17392	Urocanase C-terminal domain
NIAKO_RS10840	PF01175	Urocanase Rossmann-like domain
NIAKO_RS10845	PF00221	Aromatic amino acid lyase
NIAKO_RS10850	PF03466	LysR substrate binding domain
NIAKO_RS10850	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
NIAKO_RS10855	PF03825	Nucleoside H+ symporter
NIAKO_RS10860	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
NIAKO_RS10860	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
NIAKO_RS10870	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
NIAKO_RS10870	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
NIAKO_RS10870	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
NIAKO_RS10870	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
NIAKO_RS10875	PF00156	Phosphoribosyl transferase domain
NIAKO_RS10880	PF02754	Cysteine-rich domain
NIAKO_RS10880	PF13183	4Fe-4S dicluster domain
NIAKO_RS10915	PF00487	Fatty acid desaturase
NIAKO_RS10965	PF05974	Domain of unknown function (DUF892)
NIAKO_RS10975	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
NIAKO_RS10980	PF00535	Glycosyl transferase family 2
NIAKO_RS10985	PF02543	Carbamoyltransferase N-terminus
NIAKO_RS10985	PF16861	Carbamoyltransferase C-terminus
NIAKO_RS10995	PF00534	Glycosyl transferases group 1
NIAKO_RS10995	PF13439	Glycosyltransferase Family 4
NIAKO_RS11025	PF00403	Heavy-metal-associated domain
NIAKO_RS11030	PF12833	Helix-turn-helix domain
NIAKO_RS11030	PF02311	AraC-like ligand binding domain
NIAKO_RS11040	PF12848	ABC transporter
NIAKO_RS11040	PF16326	ABC transporter C-terminal domain
NIAKO_RS11040	PF00005	ABC transporter
NIAKO_RS11060	PF00593	TonB dependent receptor
NIAKO_RS11060	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS11095	PF12833	Helix-turn-helix domain
NIAKO_RS11095	PF02311	AraC-like ligand binding domain
NIAKO_RS11100	PF00561	alpha/beta hydrolase fold
NIAKO_RS11115	PF00106	short chain dehydrogenase
NIAKO_RS11155	PF00106	short chain dehydrogenase
NIAKO_RS11160	PF12833	Helix-turn-helix domain
NIAKO_RS11165	PF06965	Na+/H+ antiporter 1
NIAKO_RS11165	PF13462	Thioredoxin
NIAKO_RS11170	PF00578	AhpC/TSA family
NIAKO_RS11210	PF01590	GAF domain
NIAKO_RS11210	PF08446	PAS fold
NIAKO_RS11210	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS11210	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS11210	PF00360	Phytochrome region
NIAKO_RS11215	PF00011	Hsp20/alpha crystallin family
NIAKO_RS11230	PF17820	PDZ domain
NIAKO_RS11230	PF13180	PDZ domain
NIAKO_RS11260	PF01738	Dienelactone hydrolase family
NIAKO_RS11260	PF00156	Phosphoribosyl transferase domain
NIAKO_RS11285	PF00550	Phosphopantetheine attachment site
NIAKO_RS11290	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
NIAKO_RS11290	PF00364	Biotin-requiring enzyme
NIAKO_RS11290	PF02817	e3 binding domain
NIAKO_RS11295	PF00364	Biotin-requiring enzyme
NIAKO_RS11295	PF02779	Transketolase, pyrimidine binding domain
NIAKO_RS11295	PF02780	Transketolase, C-terminal domain
NIAKO_RS11300	PF00676	Dehydrogenase E1 component
NIAKO_RS11305	PF00501	AMP-binding enzyme
NIAKO_RS11305	PF13193	AMP-binding enzyme C-terminal domain
NIAKO_RS11310	PF02811	PHP domain
NIAKO_RS11310	PF14716	Helix-hairpin-helix domain
NIAKO_RS11310	PF14791	DNA polymerase beta thumb 
NIAKO_RS11315	PF08471	Class II vitamin B12-dependent ribonucleotide reductase
NIAKO_RS11315	PF02867	Ribonucleotide reductase, barrel domain
NIAKO_RS11325	PF03119	NAD-dependent DNA ligase C4 zinc finger domain
NIAKO_RS11325	PF12826	Helix-hairpin-helix motif
NIAKO_RS11325	PF00533	BRCA1 C Terminus (BRCT) domain
NIAKO_RS11325	PF03120	NAD-dependent DNA ligase OB-fold domain
NIAKO_RS11325	PF01653	NAD-dependent DNA ligase adenylation domain
NIAKO_RS11330	PF00118	TCP-1/cpn60 chaperonin family
NIAKO_RS11335	PF08240	Alcohol dehydrogenase GroES-like domain
NIAKO_RS11350	PF00005	ABC transporter
NIAKO_RS11355	PF00005	ABC transporter
NIAKO_RS11370	PF12704	MacB-like periplasmic core domain
NIAKO_RS11370	PF02687	FtsX-like permease family
NIAKO_RS11370	PF00005	ABC transporter
NIAKO_RS11385	PF10588	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
NIAKO_RS11385	PF01568	Molydopterin dinucleotide binding domain
NIAKO_RS11385	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
NIAKO_RS11385	PF12838	4Fe-4S dicluster domain
NIAKO_RS11385	PF00384	Molybdopterin oxidoreductase
NIAKO_RS11410	PF07521	Zn-dependent metallo-hydrolase RNA specificity domain
NIAKO_RS11410	PF10996	Beta-Casp domain
NIAKO_RS11410	PF00753	Metallo-beta-lactamase superfamily
NIAKO_RS11420	PF00930	Dipeptidyl peptidase IV (DPP IV) N-terminal region
NIAKO_RS11420	PF00326	Prolyl oligopeptidase family
NIAKO_RS11445	PF00664	ABC transporter transmembrane region
NIAKO_RS11445	PF00005	ABC transporter
NIAKO_RS11445	PF03412	Peptidase C39 family
NIAKO_RS11455	PF00072	Response regulator receiver domain
NIAKO_RS11455	PF00196	Bacterial regulatory proteins, luxR family
NIAKO_RS11470	PF01804	Penicillin amidase
NIAKO_RS11510	PF18456	Diiron non-heme beta-hydroxylase N-terminal domain
NIAKO_RS11510	PF12706	Beta-lactamase superfamily domain
NIAKO_RS11515	PF00501	AMP-binding enzyme
NIAKO_RS11515	PF13193	AMP-binding enzyme C-terminal domain
NIAKO_RS11515	PF00668	Condensation domain
NIAKO_RS11515	PF00550	Phosphopantetheine attachment site
NIAKO_RS11520	PF00501	AMP-binding enzyme
NIAKO_RS11520	PF13193	AMP-binding enzyme C-terminal domain
NIAKO_RS11520	PF00550	Phosphopantetheine attachment site
NIAKO_RS11520	PF00975	Thioesterase domain
NIAKO_RS11520	PF00668	Condensation domain
NIAKO_RS11525	PF00501	AMP-binding enzyme
NIAKO_RS11525	PF00668	Condensation domain
NIAKO_RS11525	PF00975	Thioesterase domain
NIAKO_RS11525	PF13193	AMP-binding enzyme C-terminal domain
NIAKO_RS11525	PF00550	Phosphopantetheine attachment site
NIAKO_RS11530	PF13193	AMP-binding enzyme C-terminal domain
NIAKO_RS11530	PF02801	Beta-ketoacyl synthase, C-terminal domain
NIAKO_RS11530	PF00109	Beta-ketoacyl synthase, N-terminal domain
NIAKO_RS11530	PF00668	Condensation domain
NIAKO_RS11530	PF00202	Aminotransferase class-III
NIAKO_RS11530	PF16197	Ketoacyl-synthetase C-terminal extension
NIAKO_RS11530	PF00501	AMP-binding enzyme
NIAKO_RS11530	PF00550	Phosphopantetheine attachment site
NIAKO_RS11535	PF00975	Thioesterase domain
NIAKO_RS11535	PF13193	AMP-binding enzyme C-terminal domain
NIAKO_RS11535	PF00668	Condensation domain
NIAKO_RS11535	PF00501	AMP-binding enzyme
NIAKO_RS11535	PF00550	Phosphopantetheine attachment site
NIAKO_RS11540	PF00668	Condensation domain
NIAKO_RS11540	PF00550	Phosphopantetheine attachment site
NIAKO_RS11540	PF00975	Thioesterase domain
NIAKO_RS11540	PF00501	AMP-binding enzyme
NIAKO_RS11540	PF13193	AMP-binding enzyme C-terminal domain
NIAKO_RS11545	PF00291	Pyridoxal-phosphate dependent enzyme
NIAKO_RS11550	PF08281	Sigma-70, region 4
NIAKO_RS11550	PF04542	Sigma-70 region 2 
NIAKO_RS11615	PF16363	GDP-mannose 4,6 dehydratase
NIAKO_RS11620	PF11838	ERAP1-like C-terminal domain
NIAKO_RS11620	PF01433	Peptidase family M1 domain
NIAKO_RS11665	PF00593	TonB dependent receptor
NIAKO_RS11665	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS11680	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS11680	PF07495	Y_Y_Y domain
NIAKO_RS11680	PF00072	Response regulator receiver domain
NIAKO_RS11680	PF07494	Two component regulator propeller
NIAKO_RS11680	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS11680	PF12833	Helix-turn-helix domain
NIAKO_RS11680	PF00072	Response regulator receiver domain
NIAKO_RS11680	PF07495	Y_Y_Y domain
NIAKO_RS11680	PF07494	Two component regulator propeller
NIAKO_RS11680	PF12833	Helix-turn-helix domain
NIAKO_RS11680	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS11680	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS11685	PF14322	Starch-binding associating with outer membrane
NIAKO_RS11685	PF07980	SusD family
NIAKO_RS11690	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS11690	PF00593	TonB dependent receptor
NIAKO_RS11700	PF05336	L-rhamnose mutarotase
NIAKO_RS11705	PF08532	Beta-galactosidase trimerisation domain
NIAKO_RS11705	PF08533	Beta-galactosidase C-terminal domain
NIAKO_RS11705	PF02449	Beta-galactosidase
NIAKO_RS11710	PF00553	Cellulose binding domain
NIAKO_RS11710	PF00150	Cellulase (glycosyl hydrolase family 5)
NIAKO_RS11720	PF01229	Glycosyl hydrolases family 39
NIAKO_RS11725	PF13004	Putative binding domain, N-terminal
NIAKO_RS11725	PF00150	Cellulase (glycosyl hydrolase family 5)
NIAKO_RS11735	PF14322	Starch-binding associating with outer membrane
NIAKO_RS11735	PF07980	SusD family
NIAKO_RS11740	PF00593	TonB dependent receptor
NIAKO_RS11740	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS11755	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS11755	PF00593	TonB dependent receptor
NIAKO_RS11760	PF17137	Domain of unknown function (DUF5110)
NIAKO_RS11760	PF16338	Domain of unknown function (DUF4968)
NIAKO_RS11760	PF01055	Glycosyl hydrolases family 31 
NIAKO_RS11765	PF00703	Glycosyl hydrolases family 2
NIAKO_RS11765	PF02836	Glycosyl hydrolases family 2, TIM barrel domain
NIAKO_RS11765	PF18565	Glycoside hydrolase family 2 C-terminal domain 5
NIAKO_RS11765	PF02837	Glycosyl hydrolases family 2, sugar binding domain
NIAKO_RS11765	PF16355	Domain of unknown function (DUF4982)
NIAKO_RS11775	PF14310	Fibronectin type III-like domain
NIAKO_RS11775	PF00933	Glycosyl hydrolase family 3 N terminal domain
NIAKO_RS11775	PF01915	Glycosyl hydrolase family 3 C-terminal domain
NIAKO_RS11780	PF02836	Glycosyl hydrolases family 2, TIM barrel domain
NIAKO_RS11780	PF02837	Glycosyl hydrolases family 2, sugar binding domain
NIAKO_RS11780	PF18565	Glycoside hydrolase family 2 C-terminal domain 5
NIAKO_RS11780	PF00703	Glycosyl hydrolases family 2
NIAKO_RS11780	PF16355	Domain of unknown function (DUF4982)
NIAKO_RS11785	PF00072	Response regulator receiver domain
NIAKO_RS11785	PF07494	Two component regulator propeller
NIAKO_RS11785	PF12833	Helix-turn-helix domain
NIAKO_RS11785	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS11785	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS11785	PF07495	Y_Y_Y domain
NIAKO_RS11810	PF00535	Glycosyl transferase family 2
NIAKO_RS11840	PF14322	Starch-binding associating with outer membrane
NIAKO_RS11840	PF07980	SusD family
NIAKO_RS11845	PF00593	TonB dependent receptor
NIAKO_RS11845	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS11855	PF04542	Sigma-70 region 2 
NIAKO_RS11855	PF04545	Sigma-70, region 4
NIAKO_RS11880	PF00072	Response regulator receiver domain
NIAKO_RS11880	PF04397	LytTr DNA-binding domain
NIAKO_RS11885	PF06580	Histidine kinase
NIAKO_RS11885	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS11885	PF07694	5TMR of 5TMR-LYT
NIAKO_RS11890	PF00135	Carboxylesterase family
NIAKO_RS11895	PF02836	Glycosyl hydrolases family 2, TIM barrel domain
NIAKO_RS11895	PF00703	Glycosyl hydrolases family 2
NIAKO_RS11895	PF02837	Glycosyl hydrolases family 2, sugar binding domain
NIAKO_RS11900	PF10566	Glycoside hydrolase 97  
NIAKO_RS11900	PF14508	Glycosyl-hydrolase 97 N-terminal
NIAKO_RS11900	PF14509	Glycosyl-hydrolase 97 C-terminal, oligomerisation
NIAKO_RS11920	PF02018	Carbohydrate binding domain
NIAKO_RS11920	PF00331	Glycosyl hydrolase family 10
NIAKO_RS11920	PF00395	S-layer homology domain
NIAKO_RS11920	PF06452	Carbohydrate family 9 binding domain-like
NIAKO_RS11930	PF14322	Starch-binding associating with outer membrane
NIAKO_RS11930	PF07980	SusD family
NIAKO_RS11935	PF00593	TonB dependent receptor
NIAKO_RS11935	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS11945	PF04542	Sigma-70 region 2 
NIAKO_RS11945	PF08281	Sigma-70, region 4
NIAKO_RS11945	PF12680	SnoaL-like domain
NIAKO_RS11960	PF00942	Cellulose binding domain
NIAKO_RS11960	PF00150	Cellulase (glycosyl hydrolase family 5)
NIAKO_RS11960	PF12891	Glycoside hydrolase family 44
NIAKO_RS11965	PF14508	Glycosyl-hydrolase 97 N-terminal
NIAKO_RS11965	PF14509	Glycosyl-hydrolase 97 C-terminal, oligomerisation
NIAKO_RS11965	PF10566	Glycoside hydrolase 97  
NIAKO_RS11970	PF17137	Domain of unknown function (DUF5110)
NIAKO_RS11970	PF01055	Glycosyl hydrolases family 31 
NIAKO_RS11970	PF16338	Domain of unknown function (DUF4968)
NIAKO_RS11980	PF03629	Carbohydrate esterase, sialic acid-specific acetylesterase
NIAKO_RS11980	PF00756	Putative esterase
NIAKO_RS11985	PF14322	Starch-binding associating with outer membrane
NIAKO_RS11985	PF07980	SusD family
NIAKO_RS11990	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS11990	PF00593	TonB dependent receptor
NIAKO_RS11995	PF17851	Beta xylosidase C-terminal Concanavalin A-like domain 
NIAKO_RS11995	PF04616	Glycosyl hydrolases family 43
NIAKO_RS12010	PF00593	TonB dependent receptor
NIAKO_RS12010	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS12020	PF00593	TonB dependent receptor
NIAKO_RS12020	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS12025	PF04616	Glycosyl hydrolases family 43
NIAKO_RS12035	PF00331	Glycosyl hydrolase family 10
NIAKO_RS12035	PF03422	Carbohydrate binding module (family 6)
NIAKO_RS12035	PF00404	Dockerin type I domain
NIAKO_RS12035	PF00756	Putative esterase
NIAKO_RS12040	PF06964	Alpha-L-arabinofuranosidase C-terminal domain
NIAKO_RS12045	PF00756	Putative esterase
NIAKO_RS12045	PF03629	Carbohydrate esterase, sialic acid-specific acetylesterase
NIAKO_RS12050	PF01915	Glycosyl hydrolase family 3 C-terminal domain
NIAKO_RS12050	PF00933	Glycosyl hydrolase family 3 N terminal domain
NIAKO_RS12050	PF07691	PA14 domain
NIAKO_RS12050	PF14310	Fibronectin type III-like domain
NIAKO_RS12055	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS12055	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS12055	PF07494	Two component regulator propeller
NIAKO_RS12055	PF12833	Helix-turn-helix domain
NIAKO_RS12055	PF07495	Y_Y_Y domain
NIAKO_RS12055	PF00072	Response regulator receiver domain
NIAKO_RS12060	PF00331	Glycosyl hydrolase family 10
NIAKO_RS12075	PF00873	AcrB/AcrD/AcrF family
NIAKO_RS12095	PF00486	Transcriptional regulatory protein, C terminal
NIAKO_RS12095	PF00072	Response regulator receiver domain
NIAKO_RS12125	PF04397	LytTr DNA-binding domain
NIAKO_RS12125	PF00072	Response regulator receiver domain
NIAKO_RS12135	PF00248	Aldo/keto reductase family
NIAKO_RS12170	PF02627	Carboxymuconolactone decarboxylase family
NIAKO_RS12185	PF02311	AraC-like ligand binding domain
NIAKO_RS12185	PF12833	Helix-turn-helix domain
NIAKO_RS12190	PF08240	Alcohol dehydrogenase GroES-like domain
NIAKO_RS12190	PF00107	Zinc-binding dehydrogenase
NIAKO_RS12240	PF00593	TonB dependent receptor
NIAKO_RS12240	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS12275	PF00962	Adenosine/AMP deaminase
NIAKO_RS12320	PF00106	short chain dehydrogenase
NIAKO_RS12325	PF00456	Transketolase, thiamine diphosphate binding domain
NIAKO_RS12335	PF01370	NAD dependent epimerase/dehydratase family
NIAKO_RS12345	PF02112	cAMP phosphodiesterases class-II
NIAKO_RS12380	PF04542	Sigma-70 region 2 
NIAKO_RS12380	PF08281	Sigma-70, region 4
NIAKO_RS12415	PF00356	Bacterial regulatory proteins, lacI family
NIAKO_RS12440	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
NIAKO_RS12455	PF17389	Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain
NIAKO_RS12455	PF17390	Bacterial alpha-L-rhamnosidase C-terminal domain
NIAKO_RS12455	PF05592	Bacterial alpha-L-rhamnosidase concanavalin-like domain
NIAKO_RS12455	PF08531	Alpha-L-rhamnosidase N-terminal domain
NIAKO_RS12460	PF10042	Uncharacterized conserved protein (DUF2278)
NIAKO_RS12475	PF01638	HxlR-like helix-turn-helix
NIAKO_RS12480	PF02525	Flavodoxin-like fold
NIAKO_RS12495	PF00593	TonB dependent receptor
NIAKO_RS12495	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS12520	PF00082	Subtilase family
NIAKO_RS12520	PF05922	Peptidase inhibitor I9
NIAKO_RS12525	PF16363	GDP-mannose 4,6 dehydratase
NIAKO_RS12535	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
NIAKO_RS12535	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
NIAKO_RS12540	PF01979	Amidohydrolase family
NIAKO_RS12550	PF00535	Glycosyl transferase family 2
NIAKO_RS12560	PF00288	GHMP kinases N terminal domain
NIAKO_RS12560	PF08544	GHMP kinases C terminal 
NIAKO_RS12565	PF13580	SIS domain
NIAKO_RS12570	PF00483	Nucleotidyl transferase
NIAKO_RS12575	PF08645	Polynucleotide kinase 3 phosphatase
NIAKO_RS12590	PF03144	Elongation factor Tu domain 2
NIAKO_RS12590	PF06421	GTP-binding protein LepA C-terminus
NIAKO_RS12590	PF00679	Elongation factor G C-terminus
NIAKO_RS12590	PF00009	Elongation factor Tu GTP binding domain
NIAKO_RS12625	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
NIAKO_RS12625	PF13378	Enolase C-terminal domain-like
NIAKO_RS12630	PF02446	4-alpha-glucanotransferase
NIAKO_RS12640	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
NIAKO_RS12645	PF02222	ATP-grasp domain
NIAKO_RS12645	PF17769	Phosphoribosylaminoimidazole carboxylase C-terminal domain
NIAKO_RS12650	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
NIAKO_RS12655	PF00873	AcrB/AcrD/AcrF family
NIAKO_RS12665	PF00731	AIR carboxylase
NIAKO_RS12675	PF10079	Bacillithiol biosynthesis BshC 
NIAKO_RS12685	PF01266	FAD dependent oxidoreductase
NIAKO_RS12690	PF05544	Proline racemase
NIAKO_RS12695	PF00171	Aldehyde dehydrogenase family
NIAKO_RS12700	PF04055	Radical SAM superfamily
NIAKO_RS12700	PF18693	TRAM domain
NIAKO_RS12700	PF00919	Uncharacterized protein family UPF0004
NIAKO_RS12710	PF00448	SRP54-type protein, GTPase domain
NIAKO_RS12710	PF02881	SRP54-type protein, helical bundle domain
NIAKO_RS12715	PF00471	Ribosomal protein L33
NIAKO_RS12720	PF00830	Ribosomal L28 family
NIAKO_RS12725	PF13090	Polyphosphate kinase C-terminal domain 2
NIAKO_RS12725	PF17941	Polyphosphate kinase C-terminal domain 1
NIAKO_RS12725	PF02503	Polyphosphate kinase middle domain
NIAKO_RS12725	PF13089	Polyphosphate kinase N-terminal domain
NIAKO_RS12730	PF02541	Ppx/GppA phosphatase family
NIAKO_RS12735	PF02548	Ketopantoate hydroxymethyltransferase
NIAKO_RS12750	PF04397	LytTr DNA-binding domain
NIAKO_RS12750	PF00072	Response regulator receiver domain
NIAKO_RS12825	PF02861	Clp amino terminal domain, pathogenicity island component
NIAKO_RS12825	PF10431	C-terminal, D2-small domain, of ClpB protein 
NIAKO_RS12825	PF17871	AAA lid domain
NIAKO_RS12825	PF07724	AAA domain (Cdc48 subfamily)
NIAKO_RS12825	PF00004	ATPase family associated with various cellular activities (AAA)
NIAKO_RS12835	PF00877	NlpC/P60 family
NIAKO_RS12875	PF01810	LysE type translocator
NIAKO_RS12885	PF07885	Ion channel
NIAKO_RS12885	PF17655	Inward rectifier potassium channel C-terminal domain
NIAKO_RS12890	PF02698	DUF218 domain
NIAKO_RS12895	PF01842	ACT domain
NIAKO_RS12895	PF00551	Formyl transferase
NIAKO_RS12900	PF00593	TonB dependent receptor
NIAKO_RS12900	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS12915	PF12833	Helix-turn-helix domain
NIAKO_RS12925	PF00732	GMC oxidoreductase
NIAKO_RS12925	PF05199	GMC oxidoreductase
NIAKO_RS12940	PF14492	Elongation Factor G, domain II
NIAKO_RS12940	PF00679	Elongation factor G C-terminus
NIAKO_RS12940	PF03764	Elongation factor G, domain IV
NIAKO_RS12940	PF03144	Elongation factor Tu domain 2
NIAKO_RS12940	PF00009	Elongation factor Tu GTP binding domain
NIAKO_RS12950	PF10410	DnaB-helicase binding domain of primase
NIAKO_RS12950	PF08275	DNA primase catalytic core, N-terminal domain
NIAKO_RS12950	PF01807	CHC2 zinc finger
NIAKO_RS12970	PF02660	Glycerol-3-phosphate acyltransferase
NIAKO_RS12980	PF03725	3' exoribonuclease family, domain 2
NIAKO_RS12980	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
NIAKO_RS12980	PF00013	KH domain
NIAKO_RS12980	PF01138	3' exoribonuclease family, domain 1
NIAKO_RS12980	PF00575	S1 RNA binding domain
NIAKO_RS12985	PF00312	Ribosomal protein S15
NIAKO_RS13000	PF00005	ABC transporter
NIAKO_RS13005	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS13005	PF00593	TonB dependent receptor
NIAKO_RS13020	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
NIAKO_RS13020	PF03466	LysR substrate binding domain
NIAKO_RS13025	PF03601	Conserved hypothetical protein 698
NIAKO_RS13050	PF16653	Saccharopine dehydrogenase C-terminal domain
NIAKO_RS13050	PF03435	Saccharopine dehydrogenase NADP binding domain
NIAKO_RS13055	PF17851	Beta xylosidase C-terminal Concanavalin A-like domain 
NIAKO_RS13055	PF04616	Glycosyl hydrolases family 43
NIAKO_RS13060	PF00331	Glycosyl hydrolase family 10
NIAKO_RS13060	PF00553	Cellulose binding domain
NIAKO_RS13060	PF02013	Cellulose or protein binding domain
NIAKO_RS13070	PF07980	SusD family
NIAKO_RS13070	PF14322	Starch-binding associating with outer membrane
NIAKO_RS13075	PF00593	TonB dependent receptor
NIAKO_RS13075	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS13095	PF00593	TonB dependent receptor
NIAKO_RS13095	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS13120	PF00753	Metallo-beta-lactamase superfamily
NIAKO_RS13155	PF00593	TonB dependent receptor
NIAKO_RS13155	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS13175	PF04074	YhcH/YjgK/YiaL
NIAKO_RS13190	PF14310	Fibronectin type III-like domain
NIAKO_RS13190	PF00933	Glycosyl hydrolase family 3 N terminal domain
NIAKO_RS13190	PF01915	Glycosyl hydrolase family 3 C-terminal domain
NIAKO_RS13195	PF00330	Aconitase family (aconitate hydratase)
NIAKO_RS13200	PF00694	Aconitase C-terminal domain
NIAKO_RS13205	PF00682	HMGL-like
NIAKO_RS13205	PF08502	LeuA allosteric (dimerisation) domain
NIAKO_RS13215	PF00180	Isocitrate/isopropylmalate dehydrogenase
NIAKO_RS13220	PF03328	HpcH/HpaI aldolase/citrate lyase family
NIAKO_RS13225	PF02447	GntP family permease
NIAKO_RS13230	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
NIAKO_RS13230	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
NIAKO_RS13235	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
NIAKO_RS13235	PF13378	Enolase C-terminal domain-like
NIAKO_RS13250	PF00069	Protein kinase domain
NIAKO_RS13250	PF00805	Pentapeptide repeats (8 copies)
NIAKO_RS13300	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS13300	PF00593	TonB dependent receptor
NIAKO_RS13315	PF04542	Sigma-70 region 2 
NIAKO_RS13315	PF08281	Sigma-70, region 4
NIAKO_RS13340	PF13419	Haloacid dehalogenase-like hydrolase
NIAKO_RS13345	PF01966	HD domain
NIAKO_RS13355	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS13355	PF00593	TonB dependent receptor
NIAKO_RS13360	PF07883	Cupin domain
NIAKO_RS13365	PF01569	PAP2 superfamily
NIAKO_RS13385	PF01569	PAP2 superfamily
NIAKO_RS13410	PF00593	TonB dependent receptor
NIAKO_RS13410	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS13415	PF07980	SusD family
NIAKO_RS13415	PF14322	Starch-binding associating with outer membrane
NIAKO_RS13425	PF08241	Methyltransferase domain
NIAKO_RS13425	PF12697	Alpha/beta hydrolase family
NIAKO_RS13435	PF00072	Response regulator receiver domain
NIAKO_RS13440	PF00072	Response regulator receiver domain
NIAKO_RS13445	PF01339	CheB methylesterase
NIAKO_RS13450	PF03705	CheR methyltransferase, all-alpha domain
NIAKO_RS13450	PF01739	CheR methyltransferase, SAM binding domain
NIAKO_RS13455	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS13455	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS13455	PF09308	LuxQ, periplasmic
NIAKO_RS13455	PF00072	Response regulator receiver domain
NIAKO_RS13470	PF00072	Response regulator receiver domain
NIAKO_RS13470	PF07495	Y_Y_Y domain
NIAKO_RS13470	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS13470	PF12833	Helix-turn-helix domain
NIAKO_RS13470	PF07494	Two component regulator propeller
NIAKO_RS13470	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS13485	PF02698	DUF218 domain
NIAKO_RS13490	PF00072	Response regulator receiver domain
NIAKO_RS13495	PF08446	PAS fold
NIAKO_RS13495	PF00360	Phytochrome region
NIAKO_RS13495	PF01590	GAF domain
NIAKO_RS13495	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS13495	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS13500	PF00072	Response regulator receiver domain
NIAKO_RS13500	PF00672	HAMP domain
NIAKO_RS13500	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS13500	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS13500	PF01627	Hpt domain
NIAKO_RS13500	PF09984	Uncharacterised signal transduction histidine kinase domain (DUF2222)
NIAKO_RS13505	PF03705	CheR methyltransferase, all-alpha domain
NIAKO_RS13505	PF01739	CheR methyltransferase, SAM binding domain
NIAKO_RS13510	PF01339	CheB methylesterase
NIAKO_RS13520	PF13739	Deacetylase PdaC
NIAKO_RS13520	PF11738	Protein of unknown function (DUF3298)
NIAKO_RS13520	PF01522	Polysaccharide deacetylase
NIAKO_RS13530	PF07992	Pyridine nucleotide-disulphide oxidoreductase
NIAKO_RS13535	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS13535	PF00593	TonB dependent receptor
NIAKO_RS13595	PF00282	Pyridoxal-dependent decarboxylase conserved domain
NIAKO_RS13605	PF13434	L-lysine 6-monooxygenase (NADPH-requiring)
NIAKO_RS13610	PF06276	Ferric iron reductase FhuF-like transporter
NIAKO_RS13610	PF04183	IucA / IucC family
NIAKO_RS13625	PF00501	AMP-binding enzyme
NIAKO_RS13625	PF13193	AMP-binding enzyme C-terminal domain
NIAKO_RS13630	PF04545	Sigma-70, region 4
NIAKO_RS13630	PF04542	Sigma-70 region 2 
NIAKO_RS13640	PF00593	TonB dependent receptor
NIAKO_RS13640	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS13655	PF00593	TonB dependent receptor
NIAKO_RS13655	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS13700	PF00691	OmpA family
NIAKO_RS13700	PF00223	Photosystem I psaA/psaB protein
NIAKO_RS13735	PF04542	Sigma-70 region 2 
NIAKO_RS13735	PF08281	Sigma-70, region 4
NIAKO_RS13750	PF13859	BNR repeat-like domain
NIAKO_RS13750	PF14873	N-terminal domain of BNR-repeat neuraminidase
NIAKO_RS13760	PF00593	TonB dependent receptor
NIAKO_RS13760	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS13790	PF07494	Two component regulator propeller
NIAKO_RS13790	PF00072	Response regulator receiver domain
NIAKO_RS13790	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS13790	PF07495	Y_Y_Y domain
NIAKO_RS13790	PF12833	Helix-turn-helix domain
NIAKO_RS13790	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS13795	PF00593	TonB dependent receptor
NIAKO_RS13795	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS13800	PF14322	Starch-binding associating with outer membrane
NIAKO_RS13800	PF07980	SusD family
NIAKO_RS13805	PF02837	Glycosyl hydrolases family 2, sugar binding domain
NIAKO_RS13805	PF00703	Glycosyl hydrolases family 2
NIAKO_RS13805	PF02836	Glycosyl hydrolases family 2, TIM barrel domain
NIAKO_RS13805	PF16355	Domain of unknown function (DUF4982)
NIAKO_RS13805	PF18565	Glycoside hydrolase family 2 C-terminal domain 5
NIAKO_RS13810	PF00753	Metallo-beta-lactamase superfamily
NIAKO_RS13810	PF16123	Hydroxyacylglutathione hydrolase C-terminus
NIAKO_RS13830	PF13533	Biotin-lipoyl like
NIAKO_RS13835	PF00873	AcrB/AcrD/AcrF family
NIAKO_RS13840	PF02321	Outer membrane efflux protein
NIAKO_RS13860	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS13860	PF00593	TonB dependent receptor
NIAKO_RS13875	PF04616	Glycosyl hydrolases family 43
NIAKO_RS13885	PF01965	DJ-1/PfpI family
NIAKO_RS13885	PF12833	Helix-turn-helix domain
NIAKO_RS13910	PF00893	Small Multidrug Resistance protein
NIAKO_RS13915	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
NIAKO_RS13915	PF13378	Enolase C-terminal domain-like
NIAKO_RS13925	PF01758	Sodium Bile acid symporter family
NIAKO_RS13930	PF13378	Enolase C-terminal domain-like
NIAKO_RS13930	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
NIAKO_RS13935	PF03737	Aldolase/RraA
NIAKO_RS13940	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
NIAKO_RS13940	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
NIAKO_RS13945	PF14525	AraC-binding-like domain
NIAKO_RS13945	PF12833	Helix-turn-helix domain
NIAKO_RS13950	PF00593	TonB dependent receptor
NIAKO_RS13950	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS13960	PF00920	Dehydratase family
NIAKO_RS13975	PF11700	Vacuole effluxer Atg22 like
NIAKO_RS13985	PF17851	Beta xylosidase C-terminal Concanavalin A-like domain 
NIAKO_RS13985	PF04616	Glycosyl hydrolases family 43
NIAKO_RS13990	PF01915	Glycosyl hydrolase family 3 C-terminal domain
NIAKO_RS13990	PF14310	Fibronectin type III-like domain
NIAKO_RS13990	PF00933	Glycosyl hydrolase family 3 N terminal domain
NIAKO_RS14010	PF00723	Glycosyl hydrolases family 15
NIAKO_RS14020	PF00118	TCP-1/cpn60 chaperonin family
NIAKO_RS14025	PF00166	Chaperonin 10 Kd subunit
NIAKO_RS14030	PF05506	Domain of unknown function (DUF756)
NIAKO_RS14030	PF04185	Phosphoesterase family
NIAKO_RS14145	PF01494	FAD binding domain
NIAKO_RS14150	PF01638	HxlR-like helix-turn-helix
NIAKO_RS14155	PF13460	NAD(P)H-binding 
NIAKO_RS14165	PF00593	TonB dependent receptor
NIAKO_RS14165	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS14170	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS14170	PF00072	Response regulator receiver domain
NIAKO_RS14170	PF07494	Two component regulator propeller
NIAKO_RS14170	PF12833	Helix-turn-helix domain
NIAKO_RS14170	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS14170	PF07495	Y_Y_Y domain
NIAKO_RS14175	PF00248	Aldo/keto reductase family
NIAKO_RS14180	PF17954	Quercetinase C-terminal cupin domain
NIAKO_RS14180	PF02678	Pirin
NIAKO_RS14200	PF14322	Starch-binding associating with outer membrane
NIAKO_RS14200	PF07980	SusD family
NIAKO_RS14205	PF00593	TonB dependent receptor
NIAKO_RS14205	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS14220	PF02417	Chromate transporter
NIAKO_RS14225	PF04616	Glycosyl hydrolases family 43
NIAKO_RS14230	PF00156	Phosphoribosyl transferase domain
NIAKO_RS14230	PF01738	Dienelactone hydrolase family
NIAKO_RS14260	PF01370	NAD dependent epimerase/dehydratase family
NIAKO_RS14275	PF00171	Aldehyde dehydrogenase family
NIAKO_RS14295	PF01887	S-adenosyl-l-methionine hydroxide adenosyltransferase
NIAKO_RS14325	PF00753	Metallo-beta-lactamase superfamily
NIAKO_RS14340	PF07690	Major Facilitator Superfamily
NIAKO_RS14345	PF01965	DJ-1/PfpI family
NIAKO_RS14365	PF02873	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
NIAKO_RS14365	PF01565	FAD binding domain 
NIAKO_RS14380	PF18074	Primosomal protein N C-terminal domain
NIAKO_RS14380	PF17764	3′ DNA-binding domain (3′BD)
NIAKO_RS14380	PF00271	Helicase conserved C-terminal domain
NIAKO_RS14380	PF04851	Type III restriction enzyme, res subunit
NIAKO_RS14380	PF18319	PriA DNA helicase Cys-rich region (CRR) domain
NIAKO_RS14395	PF00919	Uncharacterized protein family UPF0004
NIAKO_RS14395	PF01938	TRAM domain
NIAKO_RS14395	PF04055	Radical SAM superfamily
NIAKO_RS14400	PF00672	HAMP domain
NIAKO_RS14400	PF07730	Histidine kinase
NIAKO_RS14400	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS14405	PF00072	Response regulator receiver domain
NIAKO_RS14405	PF01339	CheB methylesterase
NIAKO_RS14495	PF00211	Adenylate and Guanylate cyclase catalytic domain
NIAKO_RS14500	PF00005	ABC transporter
NIAKO_RS14500	PF08402	TOBE domain
NIAKO_RS14520	PF00034	Cytochrome c
NIAKO_RS14520	PF03150	Di-haem cytochrome c peroxidase
NIAKO_RS14535	PF00361	Proton-conducting membrane transporter
NIAKO_RS14540	PF00361	Proton-conducting membrane transporter
NIAKO_RS14545	PF00361	Proton-conducting membrane transporter
NIAKO_RS14545	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
NIAKO_RS14550	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
NIAKO_RS14555	PF00499	NADH-ubiquinone/plastoquinone oxidoreductase chain 6
NIAKO_RS14560	PF12838	4Fe-4S dicluster domain
NIAKO_RS14565	PF00146	NADH dehydrogenase
NIAKO_RS14570	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
NIAKO_RS14570	PF00384	Molybdopterin oxidoreductase
NIAKO_RS14570	PF10588	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
NIAKO_RS14575	PF01512	Respiratory-chain NADH dehydrogenase 51 Kd subunit
NIAKO_RS14575	PF10589	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
NIAKO_RS14575	PF10531	SLBB domain
NIAKO_RS14585	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
NIAKO_RS14585	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
NIAKO_RS14590	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
NIAKO_RS14595	PF00507	NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
NIAKO_RS14600	PF00571	CBS domain
NIAKO_RS14615	PF00593	TonB dependent receptor
NIAKO_RS14615	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS14670	PF07980	SusD family
NIAKO_RS14670	PF14322	Starch-binding associating with outer membrane
NIAKO_RS14675	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS14675	PF00593	TonB dependent receptor
NIAKO_RS14680	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS14680	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS14680	PF00072	Response regulator receiver domain
NIAKO_RS14680	PF07494	Two component regulator propeller
NIAKO_RS14680	PF12833	Helix-turn-helix domain
NIAKO_RS14680	PF07495	Y_Y_Y domain
NIAKO_RS14710	PF03588	Leucyl/phenylalanyl-tRNA protein transferase
NIAKO_RS14720	PF04851	Type III restriction enzyme, res subunit
NIAKO_RS14720	PF00929	Exonuclease
NIAKO_RS14720	PF13307	Helicase C-terminal domain
NIAKO_RS14725	PF10458	Valyl tRNA synthetase tRNA binding arm
NIAKO_RS14725	PF08264	Anticodon-binding domain of tRNA
NIAKO_RS14725	PF00133	tRNA synthetases class I (I, L, M and V)
NIAKO_RS14730	PF01569	PAP2 superfamily
NIAKO_RS14735	PF01569	PAP2 superfamily
NIAKO_RS14740	PF08678	Rsbr N terminal
NIAKO_RS14740	PF01740	STAS domain
NIAKO_RS14745	PF01740	STAS domain
NIAKO_RS14750	PF13581	Histidine kinase-like ATPase domain
NIAKO_RS14760	PF00360	Phytochrome region
NIAKO_RS14760	PF08446	PAS fold
NIAKO_RS14760	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS14760	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS14760	PF01590	GAF domain
NIAKO_RS14765	PF00072	Response regulator receiver domain
NIAKO_RS14765	PF01339	CheB methylesterase
NIAKO_RS14775	PF13367	PrsW family intramembrane metalloprotease
NIAKO_RS14780	PF00583	Acetyltransferase (GNAT) family
NIAKO_RS14785	PF02592	Putative vitamin uptake transporter
NIAKO_RS14805	PF00072	Response regulator receiver domain
NIAKO_RS14805	PF04397	LytTr DNA-binding domain
NIAKO_RS14810	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS14810	PF06580	Histidine kinase
NIAKO_RS14815	PF07694	5TMR of 5TMR-LYT
NIAKO_RS14815	PF06580	Histidine kinase
NIAKO_RS14850	PF02621	Menaquinone biosynthesis
NIAKO_RS14855	PF08328	Adenylosuccinate lyase C-terminal
NIAKO_RS14855	PF00206	Lyase
NIAKO_RS14865	PF16658	Class II release factor RF3, C-terminal domain
NIAKO_RS14865	PF03144	Elongation factor Tu domain 2
NIAKO_RS14865	PF00009	Elongation factor Tu GTP binding domain
NIAKO_RS14880	PF02308	MgtC family
NIAKO_RS14890	PF00005	ABC transporter
NIAKO_RS14890	PF02687	FtsX-like permease family
NIAKO_RS14890	PF12704	MacB-like periplasmic core domain
NIAKO_RS14895	PF00814	Glycoprotease family
NIAKO_RS14900	PF05175	Methyltransferase small domain
NIAKO_RS14920	PF04542	Sigma-70 region 2 
NIAKO_RS14920	PF08281	Sigma-70, region 4
NIAKO_RS15065	PF00072	Response regulator receiver domain
NIAKO_RS15065	PF00196	Bacterial regulatory proteins, luxR family
NIAKO_RS15070	PF07730	Histidine kinase
NIAKO_RS15070	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS15080	PF09308	LuxQ, periplasmic
NIAKO_RS15080	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS15080	PF00072	Response regulator receiver domain
NIAKO_RS15080	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS15085	PF00111	2Fe-2S iron-sulfur cluster binding domain
NIAKO_RS15085	PF01799	[2Fe-2S] binding domain
NIAKO_RS15090	PF02738	Molybdopterin-binding domain of aldehyde dehydrogenase
NIAKO_RS15110	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS15110	PF00593	TonB dependent receptor
NIAKO_RS15175	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS15175	PF00593	TonB dependent receptor
NIAKO_RS15185	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS15185	PF00593	TonB dependent receptor
NIAKO_RS15195	PF00072	Response regulator receiver domain
NIAKO_RS15195	PF04397	LytTr DNA-binding domain
NIAKO_RS15205	PF00072	Response regulator receiver domain
NIAKO_RS15205	PF04397	LytTr DNA-binding domain
NIAKO_RS15220	PF00149	Calcineurin-like phosphoesterase
NIAKO_RS15225	PF03150	Di-haem cytochrome c peroxidase
NIAKO_RS15235	PF07971	Glycosyl hydrolase family 92
NIAKO_RS15235	PF17678	Glycosyl hydrolase family 92 N-terminal domain
NIAKO_RS15245	PF13533	Biotin-lipoyl like
NIAKO_RS15265	PF03062	MBOAT, membrane-bound O-acyltransferase family
NIAKO_RS15275	PF14509	Glycosyl-hydrolase 97 C-terminal, oligomerisation
NIAKO_RS15275	PF14508	Glycosyl-hydrolase 97 N-terminal
NIAKO_RS15275	PF10566	Glycoside hydrolase 97  
NIAKO_RS15290	PF14509	Glycosyl-hydrolase 97 C-terminal, oligomerisation
NIAKO_RS15290	PF14508	Glycosyl-hydrolase 97 N-terminal
NIAKO_RS15290	PF10566	Glycoside hydrolase 97  
NIAKO_RS15305	PF00593	TonB dependent receptor
NIAKO_RS15305	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS15310	PF00072	Response regulator receiver domain
NIAKO_RS15310	PF07494	Two component regulator propeller
NIAKO_RS15310	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS15310	PF12833	Helix-turn-helix domain
NIAKO_RS15310	PF07495	Y_Y_Y domain
NIAKO_RS15310	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS15340	PF00128	Alpha amylase, catalytic domain
NIAKO_RS15340	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
NIAKO_RS15345	PF00128	Alpha amylase, catalytic domain
NIAKO_RS15350	PF00128	Alpha amylase, catalytic domain
NIAKO_RS15350	PF11941	Domain of unknown function (DUF3459)
NIAKO_RS15355	PF00890	FAD binding domain
NIAKO_RS15365	PF00719	Inorganic pyrophosphatase
NIAKO_RS15375	PF00994	Probable molybdopterin binding domain
NIAKO_RS15375	PF18146	Damage-inducible protein CinA KH domain
NIAKO_RS15375	PF02464	Competence-damaged protein
NIAKO_RS15380	PF05974	Domain of unknown function (DUF892)
NIAKO_RS15390	PF12794	Mechanosensitive ion channel inner membrane domain 1
NIAKO_RS15390	PF00924	Mechanosensitive ion channel
NIAKO_RS15390	PF12795	Mechanosensitive ion channel porin domain
NIAKO_RS15400	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS15400	PF01590	GAF domain
NIAKO_RS15400	PF00360	Phytochrome region
NIAKO_RS15400	PF08446	PAS fold
NIAKO_RS15400	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS15440	PF00356	Bacterial regulatory proteins, lacI family
NIAKO_RS15460	PF00593	TonB dependent receptor
NIAKO_RS15460	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS15515	PF12146	Serine aminopeptidase, S33
NIAKO_RS15530	PF01590	GAF domain
NIAKO_RS15530	PF02954	Bacterial regulatory protein, Fis family
NIAKO_RS15530	PF00158	Sigma-54 interaction domain
NIAKO_RS15545	PF00561	alpha/beta hydrolase fold
NIAKO_RS15555	PF07969	Amidohydrolase family
NIAKO_RS15615	PF00313	'Cold-shock' DNA-binding domain
NIAKO_RS15625	PF00076	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
NIAKO_RS15630	PF06745	KaiC
NIAKO_RS15635	PF07689	KaiB domain
NIAKO_RS15645	PF01590	GAF domain
NIAKO_RS15645	PF08446	PAS fold
NIAKO_RS15645	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS15645	PF00360	Phytochrome region
NIAKO_RS15645	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS15650	PF01339	CheB methylesterase
NIAKO_RS15650	PF00072	Response regulator receiver domain
NIAKO_RS15675	PF02811	PHP domain
NIAKO_RS15675	PF14579	Helix-hairpin-helix motif
NIAKO_RS15675	PF07733	Bacterial DNA polymerase III alpha NTPase domain
NIAKO_RS15675	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
NIAKO_RS15685	PF02666	Phosphatidylserine decarboxylase
NIAKO_RS15690	PF02806	Alpha amylase, C-terminal all-beta domain
NIAKO_RS15690	PF00128	Alpha amylase, catalytic domain
NIAKO_RS15695	PF05974	Domain of unknown function (DUF892)
NIAKO_RS15705	PF01590	GAF domain
NIAKO_RS15705	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS15705	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS15705	PF08446	PAS fold
NIAKO_RS15705	PF00360	Phytochrome region
NIAKO_RS15710	PF02875	Mur ligase family, glutamate ligase domain
NIAKO_RS15710	PF08443	RimK-like ATP-grasp domain
NIAKO_RS15710	PF08245	Mur ligase middle domain
NIAKO_RS15715	PF01112	Asparaginase
NIAKO_RS15720	PF03575	Peptidase family S51
NIAKO_RS15735	PF00593	TonB dependent receptor
NIAKO_RS15735	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS15740	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS15740	PF00593	TonB dependent receptor
NIAKO_RS15750	PF11818	C-terminal domain of tail specific protease (DUF3340)
NIAKO_RS15750	PF03572	Peptidase family S41
NIAKO_RS15750	PF17804	Tail specific protease N-terminal domain
NIAKO_RS15750	PF00595	PDZ domain
NIAKO_RS15755	PF08241	Methyltransferase domain
NIAKO_RS15765	PF00704	Glycosyl hydrolases family 18
NIAKO_RS15785	PF00293	NUDIX domain
NIAKO_RS15810	PF01638	HxlR-like helix-turn-helix
NIAKO_RS15840	PF01301	Glycosyl hydrolases family 35
NIAKO_RS15845	PF07980	SusD family
NIAKO_RS15850	PF00593	TonB dependent receptor
NIAKO_RS15850	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS15855	PF00942	Cellulose binding domain
NIAKO_RS15855	PF00150	Cellulase (glycosyl hydrolase family 5)
NIAKO_RS15855	PF12891	Glycoside hydrolase family 44
NIAKO_RS15860	PF00072	Response regulator receiver domain
NIAKO_RS15860	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS15860	PF07494	Two component regulator propeller
NIAKO_RS15860	PF07495	Y_Y_Y domain
NIAKO_RS15860	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS15860	PF12833	Helix-turn-helix domain
NIAKO_RS15865	PF03738	Glutathionylspermidine synthase preATP-grasp
NIAKO_RS15885	PF00083	Sugar (and other) transporter
NIAKO_RS15905	PF01389	OmpA-like transmembrane domain
NIAKO_RS15905	PF00691	OmpA family
NIAKO_RS15920	PF00072	Response regulator receiver domain
NIAKO_RS15920	PF00196	Bacterial regulatory proteins, luxR family
NIAKO_RS15925	PF13492	GAF domain
NIAKO_RS15925	PF02702	Osmosensitive K+ channel His kinase sensor domain
NIAKO_RS15925	PF13493	Domain of unknown function (DUF4118)
NIAKO_RS15925	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS15925	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS15940	PF07980	SusD family
NIAKO_RS15940	PF14322	Starch-binding associating with outer membrane
NIAKO_RS15945	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS15945	PF00593	TonB dependent receptor
NIAKO_RS16000	PF13302	Acetyltransferase (GNAT) domain
NIAKO_RS16030	PF01594	AI-2E family transporter
NIAKO_RS16065	PF08240	Alcohol dehydrogenase GroES-like domain
NIAKO_RS16075	PF04235	Protein of unknown function (DUF418)
NIAKO_RS16075	PF07786	Protein of unknown function (DUF1624)
NIAKO_RS16085	PF17755	UvrA DNA-binding domain
NIAKO_RS16090	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS16090	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS16110	PF00144	Beta-lactamase
NIAKO_RS16200	PF00034	Cytochrome c
NIAKO_RS16200	PF03150	Di-haem cytochrome c peroxidase
NIAKO_RS16255	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS16255	PF07730	Histidine kinase
NIAKO_RS16255	PF13185	GAF domain
NIAKO_RS16255	PF13492	GAF domain
NIAKO_RS16260	PF00072	Response regulator receiver domain
NIAKO_RS16260	PF00196	Bacterial regulatory proteins, luxR family
NIAKO_RS16270	PF00106	short chain dehydrogenase
NIAKO_RS16305	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS16305	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS16305	PF00072	Response regulator receiver domain
NIAKO_RS16305	PF08448	PAS fold
NIAKO_RS16305	PF13426	PAS domain
NIAKO_RS16315	PF01339	CheB methylesterase
NIAKO_RS16315	PF00072	Response regulator receiver domain
NIAKO_RS16320	PF00072	Response regulator receiver domain
NIAKO_RS16320	PF08279	HTH domain
NIAKO_RS16350	PF02321	Outer membrane efflux protein
NIAKO_RS16355	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
NIAKO_RS16360	PF00873	AcrB/AcrD/AcrF family
NIAKO_RS16405	PF00392	Bacterial regulatory proteins, gntR family
NIAKO_RS16405	PF00155	Aminotransferase class I and II
NIAKO_RS16410	PF02627	Carboxymuconolactone decarboxylase family
NIAKO_RS16435	PF02543	Carbamoyltransferase N-terminus
NIAKO_RS16435	PF16861	Carbamoyltransferase C-terminus
NIAKO_RS16480	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
NIAKO_RS16505	PF00005	ABC transporter
NIAKO_RS16505	PF02687	FtsX-like permease family
NIAKO_RS16505	PF12704	MacB-like periplasmic core domain
NIAKO_RS16520	PF07980	SusD family
NIAKO_RS16525	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS16525	PF00593	TonB dependent receptor
NIAKO_RS16545	PF01638	HxlR-like helix-turn-helix
NIAKO_RS16565	PF12833	Helix-turn-helix domain
NIAKO_RS16565	PF02311	AraC-like ligand binding domain
NIAKO_RS16575	PF02560	Cyanate lyase C-terminal domain
NIAKO_RS16580	PF00484	Carbonic anhydrase
NIAKO_RS16600	PF01734	Patatin-like phospholipase
NIAKO_RS16655	PF00589	Phage integrase family
NIAKO_RS16655	PF02899	Phage integrase, N-terminal SAM-like domain
NIAKO_RS16660	PF05015	RelE-like toxin of type II toxin-antitoxin system HigB
NIAKO_RS16665	PF01381	Helix-turn-helix
NIAKO_RS16730	PF18272	single-stranded DNA binding TraI N-terminal subdomain
NIAKO_RS16730	PF08751	TrwC relaxase
NIAKO_RS16730	PF18340	DNA relaxase TraI 2B/2B-like domain
NIAKO_RS16730	PF07057	DNA helicase TraI
NIAKO_RS16820	PF04542	Sigma-70 region 2 
NIAKO_RS16820	PF08281	Sigma-70, region 4
NIAKO_RS16820	PF12680	SnoaL-like domain
NIAKO_RS16865	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS16865	PF00593	TonB dependent receptor
NIAKO_RS16885	PF00593	TonB dependent receptor
NIAKO_RS16885	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS16900	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS16900	PF00593	TonB dependent receptor
NIAKO_RS16915	PF08818	Domain of unknown function (DU1801)
NIAKO_RS16925	PF01022	Bacterial regulatory protein, arsR family
NIAKO_RS16955	PF00593	TonB dependent receptor
NIAKO_RS16955	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS16980	PF01966	HD domain
NIAKO_RS16990	PF01263	Aldose 1-epimerase
NIAKO_RS17005	PF00593	TonB dependent receptor
NIAKO_RS17005	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS17010	PF02311	AraC-like ligand binding domain
NIAKO_RS17010	PF12833	Helix-turn-helix domain
NIAKO_RS17015	PF00076	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
NIAKO_RS17050	PF00248	Aldo/keto reductase family
NIAKO_RS17055	PF12833	Helix-turn-helix domain
NIAKO_RS17065	PF04397	LytTr DNA-binding domain
NIAKO_RS17065	PF00072	Response regulator receiver domain
NIAKO_RS17080	PF01022	Bacterial regulatory protein, arsR family
NIAKO_RS17110	PF01638	HxlR-like helix-turn-helix
NIAKO_RS17120	PF00916	Sulfate permease family
NIAKO_RS17120	PF01740	STAS domain
NIAKO_RS17145	PF13545	Crp-like helix-turn-helix domain
NIAKO_RS17145	PF00027	Cyclic nucleotide-binding domain
NIAKO_RS17155	PF00398	Ribosomal RNA adenine dimethylase
NIAKO_RS17195	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
NIAKO_RS17210	PF14322	Starch-binding associating with outer membrane
NIAKO_RS17210	PF07980	SusD family
NIAKO_RS17215	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS17215	PF00593	TonB dependent receptor
NIAKO_RS17230	PF01975	Survival protein SurE
NIAKO_RS17240	PF00486	Transcriptional regulatory protein, C terminal
NIAKO_RS17240	PF00072	Response regulator receiver domain
NIAKO_RS17265	PF02837	Glycosyl hydrolases family 2, sugar binding domain
NIAKO_RS17275	PF00300	Histidine phosphatase superfamily (branch 1)
NIAKO_RS17280	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
NIAKO_RS17280	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
NIAKO_RS17285	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
NIAKO_RS17285	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
NIAKO_RS17290	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
NIAKO_RS17290	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
NIAKO_RS17295	PF07690	Major Facilitator Superfamily
NIAKO_RS17305	PF08220	DeoR-like helix-turn-helix domain
NIAKO_RS17305	PF00455	DeoR C terminal sensor domain
NIAKO_RS17320	PF13087	AAA domain
NIAKO_RS17320	PF13086	AAA domain
NIAKO_RS17320	PF13195	Protein of unknown function (DUF4011)
NIAKO_RS17330	PF16925	Tetracyclin repressor-like, C-terminal domain
NIAKO_RS17330	PF00440	Bacterial regulatory proteins, tetR family
NIAKO_RS17335	PF01594	AI-2E family transporter
NIAKO_RS17340	PF00999	Sodium/hydrogen exchanger family
NIAKO_RS17345	PF07730	Histidine kinase
NIAKO_RS17345	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS17345	PF05231	MASE1
NIAKO_RS17365	PF00150	Cellulase (glycosyl hydrolase family 5)
NIAKO_RS17365	PF00553	Cellulose binding domain
NIAKO_RS17385	PF13344	Haloacid dehalogenase-like hydrolase
NIAKO_RS17400	PF04030	D-arabinono-1,4-lactone oxidase 
NIAKO_RS17400	PF01565	FAD binding domain 
NIAKO_RS17415	PF00245	Alkaline phosphatase
NIAKO_RS17425	PF00593	TonB dependent receptor
NIAKO_RS17425	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS17435	PF04542	Sigma-70 region 2 
NIAKO_RS17435	PF08281	Sigma-70, region 4
NIAKO_RS17455	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS17455	PF00593	TonB dependent receptor
NIAKO_RS17465	PF00196	Bacterial regulatory proteins, luxR family
NIAKO_RS17470	PF00083	Sugar (and other) transporter
NIAKO_RS17475	PF00176	SNF2 family N-terminal domain
NIAKO_RS17475	PF04434	SWIM zinc finger
NIAKO_RS17475	PF00271	Helicase conserved C-terminal domain
NIAKO_RS17480	PF13181	Tetratricopeptide repeat
NIAKO_RS17480	PF17128	Domain of unknown function (DUF5107)
NIAKO_RS17485	PF00083	Sugar (and other) transporter
NIAKO_RS17490	PF02929	Beta galactosidase small chain
NIAKO_RS17490	PF00703	Glycosyl hydrolases family 2
NIAKO_RS17490	PF02837	Glycosyl hydrolases family 2, sugar binding domain
NIAKO_RS17490	PF16353	Domain of unknown function(DUF4981)
NIAKO_RS17490	PF02836	Glycosyl hydrolases family 2, TIM barrel domain
NIAKO_RS17495	PF02311	AraC-like ligand binding domain
NIAKO_RS17495	PF12833	Helix-turn-helix domain
NIAKO_RS17500	PF07411	Domain of unknown function (DUF1508)
NIAKO_RS17510	PF00111	2Fe-2S iron-sulfur cluster binding domain
NIAKO_RS17510	PF01799	[2Fe-2S] binding domain
NIAKO_RS17515	PF02738	Molybdopterin-binding domain of aldehyde dehydrogenase
NIAKO_RS17540	PF00690	Cation transporter/ATPase, N-terminus
NIAKO_RS17540	PF00689	Cation transporting ATPase, C-terminus
NIAKO_RS17560	PF05139	Erythromycin esterase
NIAKO_RS17560	PF00156	Phosphoribosyl transferase domain
NIAKO_RS17580	PF04055	Radical SAM superfamily
NIAKO_RS17580	PF06968	Biotin and Thiamin Synthesis associated domain
NIAKO_RS17585	PF05690	Thiazole biosynthesis protein ThiG
NIAKO_RS17590	PF02581	Thiamine monophosphate synthase
NIAKO_RS17595	PF08543	Phosphomethylpyrimidine kinase
NIAKO_RS17605	PF13667	ThiC-associated domain 
NIAKO_RS17605	PF01964	Radical SAM ThiC family
NIAKO_RS17620	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS17620	PF00593	TonB dependent receptor
NIAKO_RS17625	PF12833	Helix-turn-helix domain
NIAKO_RS17625	PF02311	AraC-like ligand binding domain
NIAKO_RS17640	PF07944	Beta-L-arabinofuranosidase, GH127
NIAKO_RS17645	PF02837	Glycosyl hydrolases family 2, sugar binding domain
NIAKO_RS17650	PF01758	Sodium Bile acid symporter family
NIAKO_RS17660	PF17042	Nucleotide-binding C-terminal domain
NIAKO_RS17660	PF07005	Sugar-binding N-terminal domain
NIAKO_RS17665	PF00016	Ribulose bisphosphate carboxylase large chain, catalytic domain
NIAKO_RS17665	PF02788	Ribulose bisphosphate carboxylase large chain, N-terminal domain
NIAKO_RS17675	PF00474	Sodium:solute symporter family
NIAKO_RS17680	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
NIAKO_RS17680	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
NIAKO_RS17700	PF00474	Sodium:solute symporter family
NIAKO_RS17705	PF17042	Nucleotide-binding C-terminal domain
NIAKO_RS17705	PF07005	Sugar-binding N-terminal domain
NIAKO_RS17710	PF04166	Pyridoxal phosphate biosynthetic protein PdxA
NIAKO_RS17715	PF00701	Dihydrodipicolinate synthetase family
NIAKO_RS17720	PF00465	Iron-containing alcohol dehydrogenase 
NIAKO_RS17725	PF17390	Bacterial alpha-L-rhamnosidase C-terminal domain
NIAKO_RS17725	PF08531	Alpha-L-rhamnosidase N-terminal domain
NIAKO_RS17725	PF17389	Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain
NIAKO_RS17725	PF05592	Bacterial alpha-L-rhamnosidase concanavalin-like domain
NIAKO_RS17730	PF02836	Glycosyl hydrolases family 2, TIM barrel domain
NIAKO_RS17730	PF00703	Glycosyl hydrolases family 2
NIAKO_RS17730	PF02929	Beta galactosidase small chain
NIAKO_RS17730	PF16353	Domain of unknown function(DUF4981)
NIAKO_RS17730	PF02837	Glycosyl hydrolases family 2, sugar binding domain
NIAKO_RS17735	PF07532	Bacterial Ig-like domain (group 4)
NIAKO_RS17770	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS17770	PF00593	TonB dependent receptor
NIAKO_RS17780	PF00703	Glycosyl hydrolases family 2
NIAKO_RS17780	PF16355	Domain of unknown function (DUF4982)
NIAKO_RS17780	PF18565	Glycoside hydrolase family 2 C-terminal domain 5
NIAKO_RS17780	PF02836	Glycosyl hydrolases family 2, TIM barrel domain
NIAKO_RS17780	PF02837	Glycosyl hydrolases family 2, sugar binding domain
NIAKO_RS17795	PF16355	Domain of unknown function (DUF4982)
NIAKO_RS17795	PF18565	Glycoside hydrolase family 2 C-terminal domain 5
NIAKO_RS17795	PF02837	Glycosyl hydrolases family 2, sugar binding domain
NIAKO_RS17795	PF00703	Glycosyl hydrolases family 2
NIAKO_RS17795	PF02836	Glycosyl hydrolases family 2, TIM barrel domain
NIAKO_RS17830	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS17830	PF00593	TonB dependent receptor
NIAKO_RS17855	PF02515	CoA-transferase family III
NIAKO_RS17860	PF02515	CoA-transferase family III
NIAKO_RS17880	PF07690	Major Facilitator Superfamily
NIAKO_RS17885	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
NIAKO_RS17885	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
NIAKO_RS17890	PF00596	Class II Aldolase and Adducin N-terminal domain
NIAKO_RS17895	PF02610	L-arabinose isomerase
NIAKO_RS17895	PF11762	L-arabinose isomerase C-terminal domain
NIAKO_RS17900	PF00474	Sodium:solute symporter family
NIAKO_RS17915	PF00657	GDSL-like Lipase/Acylhydrolase
NIAKO_RS17920	PF18370	Rhamnogalacturonan I lyases beta-sheet domain  
NIAKO_RS17955	PF02615	Malate/L-lactate dehydrogenase
NIAKO_RS17965	PF00360	Phytochrome region
NIAKO_RS17965	PF08446	PAS fold
NIAKO_RS17965	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS17965	PF01590	GAF domain
NIAKO_RS17965	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS17970	PF08531	Alpha-L-rhamnosidase N-terminal domain
NIAKO_RS17970	PF17390	Bacterial alpha-L-rhamnosidase C-terminal domain
NIAKO_RS17970	PF17389	Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain
NIAKO_RS17970	PF05592	Bacterial alpha-L-rhamnosidase concanavalin-like domain
NIAKO_RS17975	PF13472	GDSL-like Lipase/Acylhydrolase family
NIAKO_RS17990	PF01261	Xylose isomerase-like TIM barrel
NIAKO_RS17995	PF05336	L-rhamnose mutarotase
NIAKO_RS18000	PF00596	Class II Aldolase and Adducin N-terminal domain
NIAKO_RS18005	PF06379	L-rhamnose-proton symport protein (RhaT)
NIAKO_RS18020	PF08808	RES domain
NIAKO_RS18045	PF02447	GntP family permease
NIAKO_RS18055	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
NIAKO_RS18055	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
NIAKO_RS18085	PF05343	M42 glutamyl aminopeptidase
NIAKO_RS18105	PF04055	Radical SAM superfamily
NIAKO_RS18105	PF06968	Biotin and Thiamin Synthesis associated domain
NIAKO_RS18110	PF00196	Bacterial regulatory proteins, luxR family
NIAKO_RS18110	PF00072	Response regulator receiver domain
NIAKO_RS18120	PF00004	ATPase family associated with various cellular activities (AAA)
NIAKO_RS18120	PF05362	Lon protease (S16) C-terminal proteolytic domain
NIAKO_RS18120	PF02190	ATP-dependent protease La (LON) substrate-binding domain 
NIAKO_RS18130	PF00005	ABC transporter
NIAKO_RS18130	PF00664	ABC transporter transmembrane region
NIAKO_RS18140	PF00128	Alpha amylase, catalytic domain
NIAKO_RS18160	PF07690	Major Facilitator Superfamily
NIAKO_RS18180	PF07980	SusD family
NIAKO_RS18185	PF00593	TonB dependent receptor
NIAKO_RS18185	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS18225	PF00857	Isochorismatase family
NIAKO_RS18230	PF01522	Polysaccharide deacetylase
NIAKO_RS18230	PF16841	Ca-dependent carbohydrate-binding module xylan-binding
NIAKO_RS18230	PF02013	Cellulose or protein binding domain
NIAKO_RS18230	PF00457	Glycosyl hydrolases family 11
NIAKO_RS18235	PF03781	Sulfatase-modifying factor enzyme 1
NIAKO_RS18260	PF00593	TonB dependent receptor
NIAKO_RS18260	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS18270	PF01751	Toprim domain
NIAKO_RS18270	PF01131	DNA topoisomerase
NIAKO_RS18310	PF03572	Peptidase family S41
NIAKO_RS18335	PF00593	TonB dependent receptor
NIAKO_RS18335	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS18355	PF00106	short chain dehydrogenase
NIAKO_RS18370	PF08659	KR domain
NIAKO_RS18370	PF00550	Phosphopantetheine attachment site
NIAKO_RS18370	PF14765	Polyketide synthase dehydratase
NIAKO_RS18370	PF00698	Acyl transferase domain
NIAKO_RS18370	PF08240	Alcohol dehydrogenase GroES-like domain
NIAKO_RS18375	PF02622	Uncharacterized ACR, COG1678
NIAKO_RS18380	PF00128	Alpha amylase, catalytic domain
NIAKO_RS18405	PF03781	Sulfatase-modifying factor enzyme 1
NIAKO_RS18410	PF00884	Sulfatase
NIAKO_RS18415	PF00884	Sulfatase
NIAKO_RS18440	PF01965	DJ-1/PfpI family
NIAKO_RS18480	PF00884	Sulfatase
NIAKO_RS18480	PF16347	Domain of unknown function (DUF4976)
NIAKO_RS18485	PF00884	Sulfatase
NIAKO_RS18485	PF16385	Domain of unknown function
NIAKO_RS18505	PF00474	Sodium:solute symporter family
NIAKO_RS18510	PF13378	Enolase C-terminal domain-like
NIAKO_RS18510	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
NIAKO_RS18525	PF12833	Helix-turn-helix domain
NIAKO_RS18525	PF02311	AraC-like ligand binding domain
NIAKO_RS18530	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS18530	PF00593	TonB dependent receptor
NIAKO_RS18535	PF14322	Starch-binding associating with outer membrane
NIAKO_RS18535	PF07980	SusD family
NIAKO_RS18540	PF00691	OmpA family
NIAKO_RS18540	PF13488	Glycine zipper
NIAKO_RS18545	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
NIAKO_RS18545	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
NIAKO_RS18550	PF00474	Sodium:solute symporter family
NIAKO_RS18565	PF13378	Enolase C-terminal domain-like
NIAKO_RS18565	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
NIAKO_RS18570	PF00202	Aminotransferase class-III
NIAKO_RS18575	PF07995	Glucose / Sorbosone dehydrogenase
NIAKO_RS18590	PF00593	TonB dependent receptor
NIAKO_RS18590	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS18595	PF08450	SMP-30/Gluconolactonase/LRE-like region
NIAKO_RS18605	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
NIAKO_RS18615	PF07687	Peptidase dimerisation domain
NIAKO_RS18615	PF01546	Peptidase family M20/M25/M40
NIAKO_RS18620	PF00573	Ribosomal protein L4/L1 family
NIAKO_RS18630	PF01566	Natural resistance-associated macrophage protein
NIAKO_RS18635	PF07729	FCD domain
NIAKO_RS18635	PF00392	Bacterial regulatory proteins, gntR family
NIAKO_RS18655	PF03412	Peptidase C39 family
NIAKO_RS18655	PF00005	ABC transporter
NIAKO_RS18655	PF00664	ABC transporter transmembrane region
NIAKO_RS18665	PF13649	Methyltransferase domain
NIAKO_RS18715	PF01734	Patatin-like phospholipase
NIAKO_RS18730	PF16338	Domain of unknown function (DUF4968)
NIAKO_RS18730	PF17137	Domain of unknown function (DUF5110)
NIAKO_RS18730	PF13802	Galactose mutarotase-like
NIAKO_RS18730	PF01055	Glycosyl hydrolases family 31 
NIAKO_RS18735	PF00128	Alpha amylase, catalytic domain
NIAKO_RS18735	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
NIAKO_RS18750	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS18750	PF00593	TonB dependent receptor
NIAKO_RS18755	PF00128	Alpha amylase, catalytic domain
NIAKO_RS18755	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
NIAKO_RS18755	PF03714	Bacterial pullanase-associated domain
NIAKO_RS18775	PF00709	Adenylosuccinate synthetase
NIAKO_RS18790	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS18790	PF00593	TonB dependent receptor
NIAKO_RS18795	PF01431	Peptidase family M13
NIAKO_RS18795	PF05649	Peptidase family M13
NIAKO_RS18835	PF00593	TonB dependent receptor
NIAKO_RS18835	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS18840	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS18840	PF00072	Response regulator receiver domain
NIAKO_RS18840	PF12833	Helix-turn-helix domain
NIAKO_RS18840	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS18840	PF07494	Two component regulator propeller
NIAKO_RS18840	PF07495	Y_Y_Y domain
NIAKO_RS18900	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
NIAKO_RS18900	PF02896	PEP-utilising enzyme, TIM barrel domain
NIAKO_RS18900	PF00391	PEP-utilising enzyme, mobile domain
NIAKO_RS18945	PF00884	Sulfatase
NIAKO_RS18970	PF00578	AhpC/TSA family
NIAKO_RS18980	PF00486	Transcriptional regulatory protein, C terminal
NIAKO_RS18980	PF00072	Response regulator receiver domain
NIAKO_RS18985	PF00106	short chain dehydrogenase
NIAKO_RS18990	PF00144	Beta-lactamase
NIAKO_RS19100	PF08281	Sigma-70, region 4
NIAKO_RS19100	PF04542	Sigma-70 region 2 
NIAKO_RS19115	PF02899	Phage integrase, N-terminal SAM-like domain
NIAKO_RS19115	PF00589	Phage integrase family
NIAKO_RS19130	PF00561	alpha/beta hydrolase fold
NIAKO_RS19150	PF01757	Acyltransferase family
NIAKO_RS19155	PF00248	Aldo/keto reductase family
NIAKO_RS19165	PF00795	Carbon-nitrogen hydrolase
NIAKO_RS19180	PF00583	Acetyltransferase (GNAT) family
NIAKO_RS19190	PF00593	TonB dependent receptor
NIAKO_RS19190	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS19195	PF08220	DeoR-like helix-turn-helix domain
NIAKO_RS19195	PF00455	DeoR C terminal sensor domain
NIAKO_RS19205	PF02627	Carboxymuconolactone decarboxylase family
NIAKO_RS19215	PF04542	Sigma-70 region 2 
NIAKO_RS19215	PF08281	Sigma-70, region 4
NIAKO_RS19225	PF04343	Protein of unknown function, DUF488
NIAKO_RS19245	PF00072	Response regulator receiver domain
NIAKO_RS19265	PF00691	OmpA family
NIAKO_RS19265	PF00223	Photosystem I psaA/psaB protein
NIAKO_RS19365	PF02562	PhoH-like protein
NIAKO_RS19375	PF00719	Inorganic pyrophosphatase
NIAKO_RS19385	PF00877	NlpC/P60 family
NIAKO_RS19390	PF08281	Sigma-70, region 4
NIAKO_RS19390	PF04542	Sigma-70 region 2 
NIAKO_RS19400	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
NIAKO_RS19410	PF03932	CutC family
NIAKO_RS19415	PF01112	Asparaginase
NIAKO_RS19420	PF02129	X-Pro dipeptidyl-peptidase (S15 family)
NIAKO_RS19420	PF08530	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
NIAKO_RS19425	PF00728	Glycosyl hydrolase family 20, catalytic domain
NIAKO_RS19425	PF07691	PA14 domain
NIAKO_RS19425	PF02838	Glycosyl hydrolase family 20, domain 2
NIAKO_RS19430	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
NIAKO_RS19430	PF02585	GlcNAc-PI de-N-acetylase
NIAKO_RS19440	PF00072	Response regulator receiver domain
NIAKO_RS19440	PF08279	HTH domain
NIAKO_RS19445	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS19445	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS19445	PF08446	PAS fold
NIAKO_RS19445	PF00360	Phytochrome region
NIAKO_RS19445	PF01590	GAF domain
NIAKO_RS19450	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS19450	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS19450	PF01627	Hpt domain
NIAKO_RS19450	PF00072	Response regulator receiver domain
NIAKO_RS19450	PF09984	Uncharacterised signal transduction histidine kinase domain (DUF2222)
NIAKO_RS19450	PF00672	HAMP domain
NIAKO_RS19505	PF02590	Predicted SPOUT methyltransferase
NIAKO_RS19555	PF13614	AAA domain
NIAKO_RS19565	PF13007	Transposase C of IS166 homeodomain
NIAKO_RS19565	PF13817	IS66 C-terminal element
NIAKO_RS19565	PF03050	Transposase IS66 family 
NIAKO_RS19565	PF13005	zinc-finger binding domain of transposase IS66 
NIAKO_RS19590	PF00176	SNF2 family N-terminal domain
NIAKO_RS19590	PF00271	Helicase conserved C-terminal domain
NIAKO_RS19640	PF01979	Amidohydrolase family
NIAKO_RS19670	PF00574	Clp protease
NIAKO_RS19685	PF14322	Starch-binding associating with outer membrane
NIAKO_RS19685	PF07980	SusD family
NIAKO_RS19690	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS19690	PF00593	TonB dependent receptor
NIAKO_RS19735	PF00905	Penicillin binding protein transpeptidase domain
NIAKO_RS19735	PF03717	Penicillin-binding Protein dimerisation domain
NIAKO_RS19750	PF01494	FAD binding domain
NIAKO_RS19770	PF00881	Nitroreductase family
NIAKO_RS19785	PF00595	PDZ domain
NIAKO_RS19790	PF00873	AcrB/AcrD/AcrF family
NIAKO_RS19795	PF00529	HlyD membrane-fusion protein of T1SS
NIAKO_RS19795	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
NIAKO_RS19825	PF00005	ABC transporter
NIAKO_RS19830	PF00005	ABC transporter
NIAKO_RS19830	PF12704	MacB-like periplasmic core domain
NIAKO_RS19830	PF02687	FtsX-like permease family
NIAKO_RS19840	PF02954	Bacterial regulatory protein, Fis family
NIAKO_RS19840	PF00072	Response regulator receiver domain
NIAKO_RS19840	PF00158	Sigma-54 interaction domain
NIAKO_RS19845	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS19845	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS19870	PF04397	LytTr DNA-binding domain
NIAKO_RS19870	PF00072	Response regulator receiver domain
NIAKO_RS19900	PF02897	Prolyl oligopeptidase, N-terminal beta-propeller domain
NIAKO_RS19900	PF00326	Prolyl oligopeptidase family
NIAKO_RS19905	PF00561	alpha/beta hydrolase fold
NIAKO_RS19920	PF00005	ABC transporter
NIAKO_RS19920	PF08402	TOBE domain
NIAKO_RS19930	PF02687	FtsX-like permease family
NIAKO_RS19930	PF12704	MacB-like periplasmic core domain
NIAKO_RS19930	PF00005	ABC transporter
NIAKO_RS19945	PF00578	AhpC/TSA family
NIAKO_RS19965	PF00593	TonB dependent receptor
NIAKO_RS19965	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS19985	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
NIAKO_RS19990	PF00873	AcrB/AcrD/AcrF family
NIAKO_RS20005	PF01814	Hemerythrin HHE cation binding domain
NIAKO_RS20025	PF00072	Response regulator receiver domain
NIAKO_RS20025	PF04397	LytTr DNA-binding domain
NIAKO_RS20030	PF01022	Bacterial regulatory protein, arsR family
NIAKO_RS20035	PF13847	Methyltransferase domain
NIAKO_RS20040	PF00230	Major intrinsic protein
NIAKO_RS20050	PF08281	Sigma-70, region 4
NIAKO_RS20050	PF04542	Sigma-70 region 2 
NIAKO_RS20110	PF17783	CvfB-like winged helix domain
NIAKO_RS20110	PF13509	S1 domain
NIAKO_RS20120	PF00578	AhpC/TSA family
NIAKO_RS20140	PF00593	TonB dependent receptor
NIAKO_RS20140	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS20210	PF00593	TonB dependent receptor
NIAKO_RS20210	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS20240	PF02837	Glycosyl hydrolases family 2, sugar binding domain
NIAKO_RS20240	PF02836	Glycosyl hydrolases family 2, TIM barrel domain
NIAKO_RS20240	PF16355	Domain of unknown function (DUF4982)
NIAKO_RS20240	PF00703	Glycosyl hydrolases family 2
NIAKO_RS20240	PF18565	Glycoside hydrolase family 2 C-terminal domain 5
NIAKO_RS20245	PF03601	Conserved hypothetical protein 698
NIAKO_RS20270	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS20270	PF00672	HAMP domain
NIAKO_RS20270	PF13426	PAS domain
NIAKO_RS20270	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS20275	PF02702	Osmosensitive K+ channel His kinase sensor domain
NIAKO_RS20285	PF02669	K+-transporting ATPase, c chain
NIAKO_RS20295	PF03814	Potassium-transporting ATPase A subunit
NIAKO_RS20305	PF02705	K+ potassium transporter
NIAKO_RS20310	PF02954	Bacterial regulatory protein, Fis family
NIAKO_RS20310	PF00158	Sigma-54 interaction domain
NIAKO_RS20310	PF00072	Response regulator receiver domain
NIAKO_RS20320	PF01171	PP-loop family
NIAKO_RS20320	PF11734	TilS substrate C-terminal domain
NIAKO_RS20335	PF01012	Electron transfer flavoprotein domain
NIAKO_RS20335	PF00766	Electron transfer flavoprotein FAD-binding domain
NIAKO_RS20345	PF08544	GHMP kinases C terminal 
NIAKO_RS20345	PF00288	GHMP kinases N terminal domain
NIAKO_RS20350	PF00202	Aminotransferase class-III
NIAKO_RS20365	PF07690	Major Facilitator Superfamily
NIAKO_RS20385	PF00873	AcrB/AcrD/AcrF family
NIAKO_RS20405	PF00440	Bacterial regulatory proteins, tetR family
NIAKO_RS20415	PF07980	SusD family
NIAKO_RS20420	PF00593	TonB dependent receptor
NIAKO_RS20420	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS20430	PF08281	Sigma-70, region 4
NIAKO_RS20430	PF04542	Sigma-70 region 2 
NIAKO_RS20435	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS20435	PF00593	TonB dependent receptor
NIAKO_RS20440	PF07980	SusD family
NIAKO_RS20440	PF14322	Starch-binding associating with outer membrane
NIAKO_RS20445	PF01339	CheB methylesterase
NIAKO_RS20445	PF00072	Response regulator receiver domain
NIAKO_RS20460	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS20460	PF00593	TonB dependent receptor
NIAKO_RS20465	PF00072	Response regulator receiver domain
NIAKO_RS20465	PF04397	LytTr DNA-binding domain
NIAKO_RS20485	PF04405	Domain of Unknown function (DUF542)  
NIAKO_RS20485	PF01814	Hemerythrin HHE cation binding domain
NIAKO_RS20490	PF02082	Transcriptional regulator
NIAKO_RS20495	PF06441	Epoxide hydrolase N terminus
NIAKO_RS20500	PF03458	UPF0126 domain
NIAKO_RS20505	PF02575	YbaB/EbfC DNA-binding family
NIAKO_RS20510	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
NIAKO_RS20510	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
NIAKO_RS20515	PF00150	Cellulase (glycosyl hydrolase family 5)
NIAKO_RS20520	PF02254	TrkA-N domain
NIAKO_RS20520	PF00999	Sodium/hydrogen exchanger family
NIAKO_RS20525	PF02525	Flavodoxin-like fold
NIAKO_RS20535	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
NIAKO_RS20540	PF01037	Lrp/AsnC ligand binding domain
NIAKO_RS20545	PF00266	Aminotransferase class-V
NIAKO_RS20560	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS20560	PF00593	TonB dependent receptor
NIAKO_RS20590	PF01925	Sulfite exporter TauE/SafE
NIAKO_RS20600	PF00970	Oxidoreductase FAD-binding domain
NIAKO_RS20600	PF00042	Globin
NIAKO_RS20600	PF00175	Oxidoreductase NAD-binding domain 
NIAKO_RS20615	PF07690	Major Facilitator Superfamily
NIAKO_RS20620	PF03781	Sulfatase-modifying factor enzyme 1
NIAKO_RS20620	PF12867	DinB superfamily
NIAKO_RS20625	PF00528	Binding-protein-dependent transport system inner membrane component
NIAKO_RS20630	PF00571	CBS domain
NIAKO_RS20630	PF00005	ABC transporter
NIAKO_RS20635	PF00403	Heavy-metal-associated domain
NIAKO_RS20635	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
NIAKO_RS20635	PF07992	Pyridine nucleotide-disulphide oxidoreductase
NIAKO_RS20640	PF10017	Histidine-specific methyltransferase, SAM-dependent
NIAKO_RS20650	PF00486	Transcriptional regulatory protein, C terminal
NIAKO_RS20650	PF00072	Response regulator receiver domain
NIAKO_RS20665	PF03714	Bacterial pullanase-associated domain
NIAKO_RS20665	PF02806	Alpha amylase, C-terminal all-beta domain
NIAKO_RS20665	PF00128	Alpha amylase, catalytic domain
NIAKO_RS20680	PF00293	NUDIX domain
NIAKO_RS20710	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS20710	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS20710	PF18719	ArlS sensor domain
NIAKO_RS20715	PF00072	Response regulator receiver domain
NIAKO_RS20715	PF00486	Transcriptional regulatory protein, C terminal
NIAKO_RS20725	PF07694	5TMR of 5TMR-LYT
NIAKO_RS20725	PF06580	Histidine kinase
NIAKO_RS20725	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS20725	PF13492	GAF domain
NIAKO_RS20730	PF04397	LytTr DNA-binding domain
NIAKO_RS20730	PF00072	Response regulator receiver domain
NIAKO_RS20740	PF04397	LytTr DNA-binding domain
NIAKO_RS20740	PF00072	Response regulator receiver domain
NIAKO_RS20765	PF00873	AcrB/AcrD/AcrF family
NIAKO_RS20785	PF01569	PAP2 superfamily
NIAKO_RS20790	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
NIAKO_RS20790	PF00205	Thiamine pyrophosphate enzyme, central domain
NIAKO_RS20790	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
NIAKO_RS20800	PF16078	2-oxoglutarate dehydrogenase N-terminus
NIAKO_RS20800	PF16870	2-oxoglutarate dehydrogenase C-terminal
NIAKO_RS20800	PF00676	Dehydrogenase E1 component
NIAKO_RS20800	PF02779	Transketolase, pyrimidine binding domain
NIAKO_RS20805	PF03167	Uracil DNA glycosylase superfamily
NIAKO_RS20815	PF13533	Biotin-lipoyl like
NIAKO_RS20825	PF12833	Helix-turn-helix domain
NIAKO_RS20825	PF02311	AraC-like ligand binding domain
NIAKO_RS20840	PF00593	TonB dependent receptor
NIAKO_RS20840	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS20855	PF02550	Acetyl-CoA hydrolase/transferase N-terminal domain
NIAKO_RS20855	PF13336	Acetyl-CoA hydrolase/transferase C-terminal domain
NIAKO_RS20875	PF00248	Aldo/keto reductase family
NIAKO_RS20895	PF07980	SusD family
NIAKO_RS20895	PF14322	Starch-binding associating with outer membrane
NIAKO_RS20900	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS20900	PF00593	TonB dependent receptor
NIAKO_RS20920	PF02558	Ketopantoate reductase PanE/ApbA
NIAKO_RS20920	PF08546	Ketopantoate reductase PanE/ApbA C terminal
NIAKO_RS20940	PF00106	short chain dehydrogenase
NIAKO_RS20965	PF00561	alpha/beta hydrolase fold
NIAKO_RS20970	PF08281	Sigma-70, region 4
NIAKO_RS20970	PF04542	Sigma-70 region 2 
NIAKO_RS20980	PF08990	Erythronolide synthase docking
NIAKO_RS20980	PF00698	Acyl transferase domain
NIAKO_RS20980	PF02801	Beta-ketoacyl synthase, C-terminal domain
NIAKO_RS20980	PF00109	Beta-ketoacyl synthase, N-terminal domain
NIAKO_RS20980	PF08240	Alcohol dehydrogenase GroES-like domain
NIAKO_RS20980	PF00550	Phosphopantetheine attachment site
NIAKO_RS20980	PF08659	KR domain
NIAKO_RS20980	PF16197	Ketoacyl-synthetase C-terminal extension
NIAKO_RS20980	PF09277	Erythronolide synthase, docking
NIAKO_RS20980	PF14765	Polyketide synthase dehydratase
NIAKO_RS20985	PF12833	Helix-turn-helix domain
NIAKO_RS20995	PF02735	Ku70/Ku80 beta-barrel domain
NIAKO_RS21035	PF12833	Helix-turn-helix domain
NIAKO_RS21050	PF00106	short chain dehydrogenase
NIAKO_RS21055	PF02311	AraC-like ligand binding domain
NIAKO_RS21055	PF12833	Helix-turn-helix domain
NIAKO_RS21060	PF12833	Helix-turn-helix domain
NIAKO_RS21060	PF02311	AraC-like ligand binding domain
NIAKO_RS21065	PF01627	Hpt domain
NIAKO_RS21065	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS21065	PF02895	Signal transducing histidine kinase, homodimeric domain
NIAKO_RS21065	PF09078	CheY binding
NIAKO_RS21065	PF01584	CheW-like domain
NIAKO_RS21075	PF05384	Sensor protein DegS
NIAKO_RS21075	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS21075	PF07730	Histidine kinase
NIAKO_RS21085	PF00005	ABC transporter
NIAKO_RS21095	PF02254	TrkA-N domain
NIAKO_RS21095	PF00999	Sodium/hydrogen exchanger family
NIAKO_RS21100	PF00011	Hsp20/alpha crystallin family
NIAKO_RS21105	PF09828	Chromate resistance exported protein
NIAKO_RS21110	PF09828	Chromate resistance exported protein
NIAKO_RS21115	PF02417	Chromate transporter
NIAKO_RS21120	PF04945	YHS domain
NIAKO_RS21130	PF07731	Multicopper oxidase
NIAKO_RS21130	PF00394	Multicopper oxidase
NIAKO_RS21130	PF07732	Multicopper oxidase
NIAKO_RS21145	PF00011	Hsp20/alpha crystallin family
NIAKO_RS21155	PF01339	CheB methylesterase
NIAKO_RS21155	PF00072	Response regulator receiver domain
NIAKO_RS21210	PF01678	Diaminopimelate epimerase
NIAKO_RS21235	PF00005	ABC transporter
NIAKO_RS21235	PF00664	ABC transporter transmembrane region
NIAKO_RS21255	PF00919	Uncharacterized protein family UPF0004
NIAKO_RS21255	PF01938	TRAM domain
NIAKO_RS21255	PF04055	Radical SAM superfamily
NIAKO_RS21270	PF01938	TRAM domain
NIAKO_RS21270	PF00919	Uncharacterized protein family UPF0004
NIAKO_RS21270	PF04055	Radical SAM superfamily
NIAKO_RS21280	PF00919	Uncharacterized protein family UPF0004
NIAKO_RS21280	PF01938	TRAM domain
NIAKO_RS21280	PF04055	Radical SAM superfamily
NIAKO_RS21290	PF02397	Bacterial sugar transferase
NIAKO_RS21300	PF02504	Fatty acid synthesis protein
NIAKO_RS21325	PF01522	Polysaccharide deacetylase
NIAKO_RS21335	PF01979	Amidohydrolase family
NIAKO_RS21350	PF12848	ABC transporter
NIAKO_RS21350	PF00005	ABC transporter
NIAKO_RS21350	PF16326	ABC transporter C-terminal domain
NIAKO_RS21360	PF10672	S-adenosylmethionine-dependent methyltransferase
NIAKO_RS21385	PF00085	Thioredoxin
NIAKO_RS21390	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
NIAKO_RS21390	PF01346	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
NIAKO_RS21400	PF00343	Carbohydrate phosphorylase
NIAKO_RS21400	PF11897	Protein of unknown function (DUF3417)
NIAKO_RS21415	PF01566	Natural resistance-associated macrophage protein
NIAKO_RS21430	PF00180	Isocitrate/isopropylmalate dehydrogenase
NIAKO_RS21435	PF02838	Glycosyl hydrolase family 20, domain 2
NIAKO_RS21435	PF07691	PA14 domain
NIAKO_RS21435	PF00728	Glycosyl hydrolase family 20, catalytic domain
NIAKO_RS21445	PF03466	LysR substrate binding domain
NIAKO_RS21445	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
NIAKO_RS21450	PF00291	Pyridoxal-phosphate dependent enzyme
NIAKO_RS21475	PF04371	Porphyromonas-type peptidyl-arginine deiminase
NIAKO_RS21480	PF00795	Carbon-nitrogen hydrolase
NIAKO_RS21485	PF02585	GlcNAc-PI de-N-acetylase
NIAKO_RS21495	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
NIAKO_RS21495	PF07992	Pyridine nucleotide-disulphide oxidoreductase
NIAKO_RS21505	PF01266	FAD dependent oxidoreductase
NIAKO_RS21515	PF07690	Major Facilitator Superfamily
NIAKO_RS21520	PF07730	Histidine kinase
NIAKO_RS21520	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS21525	PF13419	Haloacid dehalogenase-like hydrolase
NIAKO_RS21535	PF04041	beta-1,4-mannooligosaccharide phosphorylase
NIAKO_RS21540	PF00474	Sodium:solute symporter family
NIAKO_RS21545	PF02156	Glycosyl hydrolase family 26
NIAKO_RS21560	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS21560	PF00593	TonB dependent receptor
NIAKO_RS21565	PF12833	Helix-turn-helix domain
NIAKO_RS21565	PF02311	AraC-like ligand binding domain
NIAKO_RS21575	PF16355	Domain of unknown function (DUF4982)
NIAKO_RS21575	PF00703	Glycosyl hydrolases family 2
NIAKO_RS21575	PF02837	Glycosyl hydrolases family 2, sugar binding domain
NIAKO_RS21575	PF02836	Glycosyl hydrolases family 2, TIM barrel domain
NIAKO_RS21580	PF07470	Glycosyl Hydrolase Family 88
NIAKO_RS21590	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS21590	PF00593	TonB dependent receptor
NIAKO_RS21640	PF03061	Thioesterase superfamily
NIAKO_RS21650	PF02464	Competence-damaged protein
NIAKO_RS21650	PF18146	Damage-inducible protein CinA KH domain
NIAKO_RS21650	PF00994	Probable molybdopterin binding domain
NIAKO_RS21655	PF02817	e3 binding domain
NIAKO_RS21655	PF00364	Biotin-requiring enzyme
NIAKO_RS21655	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
NIAKO_RS21675	PF00535	Glycosyl transferase family 2
NIAKO_RS21685	PF02875	Mur ligase family, glutamate ligase domain
NIAKO_RS21685	PF08245	Mur ligase middle domain
NIAKO_RS21685	PF01225	Mur ligase family, catalytic domain
NIAKO_RS21710	PF00291	Pyridoxal-phosphate dependent enzyme
NIAKO_RS21720	PF03099	Biotin/lipoate A/B protein ligase family
NIAKO_RS21725	PF01479	S4 domain
NIAKO_RS21725	PF00849	RNA pseudouridylate synthase
NIAKO_RS21735	PF01327	Polypeptide deformylase
NIAKO_RS21740	PF03652	Holliday junction resolvase
NIAKO_RS21745	PF01040	UbiA prenyltransferase family
NIAKO_RS21750	PF00588	SpoU rRNA Methylase family
NIAKO_RS21750	PF12105	SpoU, rRNA methylase, C-terminal
NIAKO_RS21755	PF05188	MutS domain II
NIAKO_RS21755	PF05192	MutS domain III
NIAKO_RS21755	PF05190	MutS family domain IV
NIAKO_RS21755	PF01624	MutS domain I
NIAKO_RS21755	PF00488	MutS domain V
NIAKO_RS21770	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
NIAKO_RS21770	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
NIAKO_RS21775	PF00266	Aminotransferase class-V
NIAKO_RS21780	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
NIAKO_RS21780	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
NIAKO_RS21780	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
NIAKO_RS21780	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
NIAKO_RS21785	PF05958	tRNA (Uracil-5-)-methyltransferase
NIAKO_RS21790	PF16347	Domain of unknown function (DUF4976)
NIAKO_RS21790	PF00884	Sulfatase
NIAKO_RS21795	PF01569	PAP2 superfamily
NIAKO_RS21800	PF01595	Cyclin M transmembrane N-terminal domain
NIAKO_RS21800	PF03471	Transporter associated domain
NIAKO_RS21800	PF00571	CBS domain
NIAKO_RS21835	PF01220	Dehydroquinase class II
NIAKO_RS21840	PF00988	Carbamoyl-phosphate synthase small chain, CPSase domain
NIAKO_RS21840	PF00117	Glutamine amidotransferase class-I
NIAKO_RS21845	PF01196	Ribosomal protein L17
NIAKO_RS21850	PF01000	RNA polymerase Rpb3/RpoA insert domain
NIAKO_RS21850	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain
NIAKO_RS21850	PF01193	RNA polymerase Rpb3/Rpb11 dimerisation domain
NIAKO_RS21855	PF01479	S4 domain
NIAKO_RS21855	PF00163	Ribosomal protein S4/S9 N-terminal domain
NIAKO_RS21860	PF00411	Ribosomal protein S11
NIAKO_RS21865	PF00416	Ribosomal protein S13/S18
NIAKO_RS21870	PF01176	Translation initiation factor 1A / IF-1
NIAKO_RS21880	PF07690	Major Facilitator Superfamily
NIAKO_RS21890	PF00440	Bacterial regulatory proteins, tetR family
NIAKO_RS21915	PF00005	ABC transporter
NIAKO_RS21920	PF00005	ABC transporter
NIAKO_RS21925	PF13533	Biotin-lipoyl like
NIAKO_RS21940	PF04209	homogentisate 1,2-dioxygenase
NIAKO_RS21955	PF00041	Fibronectin type III domain
NIAKO_RS21955	PF00704	Glycosyl hydrolases family 18
NIAKO_RS21965	PF05547	Immune inhibitor A peptidase M6
NIAKO_RS21965	PF00801	PKD domain
NIAKO_RS21970	PF00694	Aconitase C-terminal domain
NIAKO_RS21970	PF00330	Aconitase family (aconitate hydratase)
NIAKO_RS21990	PF00793	DAHP synthetase I family
NIAKO_RS22000	PF01370	NAD dependent epimerase/dehydratase family
NIAKO_RS22015	PF00708	Acylphosphatase
NIAKO_RS22030	PF08029	HisG, C-terminal domain
NIAKO_RS22030	PF01634	ATP phosphoribosyltransferase
NIAKO_RS22035	PF00815	Histidinol dehydrogenase
NIAKO_RS22040	PF00155	Aminotransferase class I and II
NIAKO_RS22045	PF07995	Glucose / Sorbosone dehydrogenase
NIAKO_RS22050	PF13442	Cytochrome C oxidase, cbb3-type, subunit III 
NIAKO_RS22050	PF00034	Cytochrome c
NIAKO_RS22055	PF00475	Imidazoleglycerol-phosphate dehydratase
NIAKO_RS22055	PF08645	Polynucleotide kinase 3 phosphatase
NIAKO_RS22065	PF03330	Lytic transglycolase
NIAKO_RS22065	PF05036	Sporulation related domain
NIAKO_RS22085	PF01910	Thiamine-binding protein
NIAKO_RS22090	PF01264	Chorismate synthase
NIAKO_RS22095	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
NIAKO_RS22100	PF01761	3-dehydroquinate synthase
NIAKO_RS22110	PF00793	DAHP synthetase I family
NIAKO_RS22115	PF00271	Helicase conserved C-terminal domain
NIAKO_RS22115	PF00270	DEAD/DEAH box helicase
NIAKO_RS22125	PF00155	Aminotransferase class I and II
NIAKO_RS22130	PF01817	Chorismate mutase type II
NIAKO_RS22130	PF00800	Prephenate dehydratase
NIAKO_RS22145	PF01380	SIS domain
NIAKO_RS22155	PF13180	PDZ domain
NIAKO_RS22155	PF03572	Peptidase family S41
NIAKO_RS22165	PF08281	Sigma-70, region 4
NIAKO_RS22165	PF04542	Sigma-70 region 2 
NIAKO_RS22180	PF16921	Tex protein YqgF-like domain
NIAKO_RS22180	PF09371	Tex-like protein N-terminal domain
NIAKO_RS22180	PF00575	S1 RNA binding domain
NIAKO_RS22180	PF17674	HHH domain
NIAKO_RS22190	PF00291	Pyridoxal-phosphate dependent enzyme
NIAKO_RS22190	PF00571	CBS domain
NIAKO_RS22200	PF01497	Periplasmic binding protein
NIAKO_RS22210	PF12706	Beta-lactamase superfamily domain
NIAKO_RS22215	PF01116	Fructose-bisphosphate aldolase class-II
NIAKO_RS22220	PF01791	DeoC/LacD family aldolase
NIAKO_RS22240	PF00675	Insulinase (Peptidase family M16)
NIAKO_RS22240	PF05193	Peptidase M16 inactive domain
NIAKO_RS22245	PF01663	Type I phosphodiesterase / nucleotide pyrophosphatase
NIAKO_RS22250	PF00155	Aminotransferase class I and II
NIAKO_RS22260	PF11412	Disulphide bond corrector protein DsbC
NIAKO_RS22260	PF02683	Cytochrome C biogenesis protein transmembrane region
NIAKO_RS22265	PF02441	Flavoprotein
NIAKO_RS22275	PF13491	4TM region of DNA translocase FtsK/SpoIIIE
NIAKO_RS22275	PF09397	Ftsk gamma domain
NIAKO_RS22275	PF01580	FtsK/SpoIIIE family
NIAKO_RS22275	PF17854	FtsK alpha domain
NIAKO_RS22280	PF07730	Histidine kinase
NIAKO_RS22280	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS22285	PF04241	Protein of unknown function (DUF423)
NIAKO_RS22290	PF01202	Shikimate kinase
NIAKO_RS22295	PF02770	Acyl-CoA dehydrogenase, middle domain
NIAKO_RS22295	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
NIAKO_RS22295	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
NIAKO_RS22300	PF08281	Sigma-70, region 4
NIAKO_RS22300	PF04542	Sigma-70 region 2 
NIAKO_RS22330	PF00593	TonB dependent receptor
NIAKO_RS22330	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS22355	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
NIAKO_RS22360	PF00266	Aminotransferase class-V
NIAKO_RS22370	PF03009	Glycerophosphoryl diester phosphodiesterase family
NIAKO_RS22375	PF01883	Iron-sulfur cluster assembly protein
NIAKO_RS22375	PF10609	NUBPL iron-transfer P-loop NTPase
NIAKO_RS22385	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
NIAKO_RS22385	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
NIAKO_RS22395	PF09186	Domain of unknown function (DUF1949)
NIAKO_RS22395	PF01205	Uncharacterized protein family UPF0029
NIAKO_RS22405	PF01872	RibD C-terminal domain
NIAKO_RS22405	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
NIAKO_RS22410	PF05175	Methyltransferase small domain
NIAKO_RS22410	PF17827	PrmC N-terminal domain
NIAKO_RS22430	PF01618	MotA/TolQ/ExbB proton channel family
NIAKO_RS22455	PF07687	Peptidase dimerisation domain
NIAKO_RS22455	PF01546	Peptidase family M20/M25/M40
NIAKO_RS22475	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
NIAKO_RS22480	PF02911	Formyl transferase, C-terminal domain
NIAKO_RS22480	PF00551	Formyl transferase
NIAKO_RS22490	PF17125	N-terminal domain of 16S rRNA methyltransferase RsmF
NIAKO_RS22490	PF01189	16S rRNA methyltransferase RsmB/F
NIAKO_RS22490	PF13636	RNA-binding PUA-like domain of methyltransferase RsmF
NIAKO_RS22505	PF02233	NAD(P) transhydrogenase beta subunit
NIAKO_RS22510	PF05222	Alanine dehydrogenase/PNT, N-terminal domain
NIAKO_RS22510	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
NIAKO_RS22510	PF12769	4TM region of pyridine nucleotide transhydrogenase, mitoch
NIAKO_RS22515	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
NIAKO_RS22515	PF05222	Alanine dehydrogenase/PNT, N-terminal domain
NIAKO_RS22525	PF00186	Dihydrofolate reductase
NIAKO_RS22530	PF00303	Thymidylate synthase
NIAKO_RS22565	PF00593	TonB dependent receptor
NIAKO_RS22590	PF13229	Right handed beta helix region
NIAKO_RS22600	PF00072	Response regulator receiver domain
NIAKO_RS22600	PF00196	Bacterial regulatory proteins, luxR family
NIAKO_RS22605	PF11798	IMS family HHH motif
NIAKO_RS22605	PF00817	impB/mucB/samB family
NIAKO_RS22605	PF11799	impB/mucB/samB family C-terminal domain
NIAKO_RS22610	PF02811	PHP domain
NIAKO_RS22610	PF14579	Helix-hairpin-helix motif
NIAKO_RS22610	PF07733	Bacterial DNA polymerase III alpha NTPase domain
NIAKO_RS22610	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
NIAKO_RS22620	PF02872	5'-nucleotidase, C-terminal domain
NIAKO_RS22620	PF00149	Calcineurin-like phosphoesterase
NIAKO_RS22635	PF01638	HxlR-like helix-turn-helix
NIAKO_RS22655	PF12146	Serine aminopeptidase, S33
NIAKO_RS22660	PF08534	Redoxin
NIAKO_RS22670	PF13421	SPFH domain-Band 7 family
NIAKO_RS22695	PF00072	Response regulator receiver domain
NIAKO_RS22695	PF07495	Y_Y_Y domain
NIAKO_RS22695	PF12833	Helix-turn-helix domain
NIAKO_RS22695	PF07494	Two component regulator propeller
NIAKO_RS22695	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS22695	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS22735	PF01346	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
NIAKO_RS22735	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
NIAKO_RS22845	PF01738	Dienelactone hydrolase family
NIAKO_RS22850	PF01619	Proline dehydrogenase
NIAKO_RS22855	PF13378	Enolase C-terminal domain-like
NIAKO_RS22855	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
NIAKO_RS22875	PF13419	Haloacid dehalogenase-like hydrolase
NIAKO_RS22880	PF00575	S1 RNA binding domain
NIAKO_RS22895	PF00557	Metallopeptidase family M24
NIAKO_RS22900	PF00344	SecY translocase
NIAKO_RS22905	PF00828	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
NIAKO_RS22910	PF00327	Ribosomal protein L30p/L7e
NIAKO_RS22915	PF00333	Ribosomal protein S5, N-terminal domain
NIAKO_RS22915	PF03719	Ribosomal protein S5, C-terminal domain
NIAKO_RS22920	PF00861	Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
NIAKO_RS22925	PF00347	Ribosomal protein L6
NIAKO_RS22930	PF00410	Ribosomal protein S8
NIAKO_RS22935	PF00253	Ribosomal protein S14p/S29e
NIAKO_RS22940	PF00673	ribosomal L5P family C-terminus
NIAKO_RS22940	PF00281	Ribosomal protein L5
NIAKO_RS22945	PF00467	KOW motif
NIAKO_RS22945	PF17136	Ribosomal proteins 50S L24/mitochondrial 39S L24
NIAKO_RS22950	PF00238	Ribosomal protein L14p/L23e
NIAKO_RS22955	PF00366	Ribosomal protein S17
NIAKO_RS22960	PF00831	Ribosomal L29 protein
NIAKO_RS22965	PF00252	Ribosomal protein L16p/L10e
NIAKO_RS22970	PF07650	KH domain
NIAKO_RS22970	PF00189	Ribosomal protein S3, C-terminal domain
NIAKO_RS22975	PF00237	Ribosomal protein L22p/L17e
NIAKO_RS22980	PF00203	Ribosomal protein S19
NIAKO_RS22985	PF03947	Ribosomal Proteins L2, C-terminal domain
NIAKO_RS22985	PF00181	Ribosomal Proteins L2, RNA binding domain
NIAKO_RS22990	PF00276	Ribosomal protein L23
NIAKO_RS22995	PF00573	Ribosomal protein L4/L1 family
NIAKO_RS23000	PF00297	Ribosomal protein L3
NIAKO_RS23010	PF00338	Ribosomal protein S10p/S20e
NIAKO_RS23030	PF00930	Dipeptidyl peptidase IV (DPP IV) N-terminal region
NIAKO_RS23030	PF00326	Prolyl oligopeptidase family
NIAKO_RS23040	PF00679	Elongation factor G C-terminus
NIAKO_RS23040	PF03144	Elongation factor Tu domain 2
NIAKO_RS23040	PF03764	Elongation factor G, domain IV
NIAKO_RS23040	PF14492	Elongation Factor G, domain II
NIAKO_RS23040	PF00009	Elongation factor Tu GTP binding domain
NIAKO_RS23060	PF00177	Ribosomal protein S7p/S5e
NIAKO_RS23065	PF00164	Ribosomal protein S12/S23
NIAKO_RS23070	PF01063	Amino-transferase class IV
NIAKO_RS23080	PF01725	Ham1 family
NIAKO_RS23100	PF01488	Shikimate / quinate 5-dehydrogenase
NIAKO_RS23100	PF08501	Shikimate dehydrogenase substrate binding domain
NIAKO_RS23100	PF18317	Shikimate 5'-dehydrogenase C-terminal domain
NIAKO_RS23105	PF02679	(2R)-phospho-3-sulfolactate synthase (ComA)
NIAKO_RS23125	PF02096	60Kd inner membrane protein
NIAKO_RS23125	PF14849	YidC periplasmic domain
NIAKO_RS23130	PF00117	Glutamine amidotransferase class-I
NIAKO_RS23130	PF06418	CTP synthase N-terminus
NIAKO_RS23135	PF03807	NADP oxidoreductase coenzyme F420-dependent
NIAKO_RS23135	PF14748	Pyrroline-5-carboxylate reductase dimerisation
NIAKO_RS23140	PF01370	NAD dependent epimerase/dehydratase family
NIAKO_RS23145	PF02769	AIR synthase related protein, C-terminal domain
NIAKO_RS23145	PF18072	Formylglycinamide ribonucleotide amidotransferase linker domain
NIAKO_RS23145	PF00586	AIR synthase related protein, N-terminal domain
NIAKO_RS23170	PF12437	Glutamine synthetase type III N terminal 
NIAKO_RS23170	PF00120	Glutamine synthetase, catalytic domain
NIAKO_RS23170	PF18318	Glutamine synthetase C-terminal domain
NIAKO_RS23205	PF02224	Cytidylate kinase
NIAKO_RS23210	PF00004	ATPase family associated with various cellular activities (AAA)
NIAKO_RS23210	PF02861	Clp amino terminal domain, pathogenicity island component
NIAKO_RS23210	PF10431	C-terminal, D2-small domain, of ClpB protein 
NIAKO_RS23210	PF17871	AAA lid domain
NIAKO_RS23210	PF07724	AAA domain (Cdc48 subfamily)
NIAKO_RS23220	PF01128	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
NIAKO_RS23245	PF02397	Bacterial sugar transferase
NIAKO_RS23250	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
NIAKO_RS23250	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
NIAKO_RS23270	PF04397	LytTr DNA-binding domain
NIAKO_RS23270	PF00072	Response regulator receiver domain
NIAKO_RS23315	PF12833	Helix-turn-helix domain
NIAKO_RS23320	PF05199	GMC oxidoreductase
NIAKO_RS23320	PF00732	GMC oxidoreductase
NIAKO_RS23365	PF13007	Transposase C of IS166 homeodomain
NIAKO_RS23365	PF13005	zinc-finger binding domain of transposase IS66 
NIAKO_RS23365	PF13817	IS66 C-terminal element
NIAKO_RS23365	PF03050	Transposase IS66 family 
NIAKO_RS23390	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS23390	PF00593	TonB dependent receptor
NIAKO_RS23425	PF06580	Histidine kinase
NIAKO_RS23425	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS23425	PF07694	5TMR of 5TMR-LYT
NIAKO_RS23425	PF13492	GAF domain
NIAKO_RS23430	PF04397	LytTr DNA-binding domain
NIAKO_RS23430	PF00072	Response regulator receiver domain
NIAKO_RS23475	PF01894	Uncharacterised protein family UPF0047
NIAKO_RS23485	PF00270	DEAD/DEAH box helicase
NIAKO_RS23485	PF13749	Putative ATP-dependent DNA helicase recG C-terminal
NIAKO_RS23485	PF17191	RecG wedge domain
NIAKO_RS23510	PF02321	Outer membrane efflux protein
NIAKO_RS23515	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
NIAKO_RS23520	PF00873	AcrB/AcrD/AcrF family
NIAKO_RS23525	PF01223	DNA/RNA non-specific endonuclease
NIAKO_RS23530	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
NIAKO_RS23530	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
NIAKO_RS23535	PF00072	Response regulator receiver domain
NIAKO_RS23555	PF02811	PHP domain
NIAKO_RS23555	PF00929	Exonuclease
NIAKO_RS23555	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
NIAKO_RS23555	PF14480	DNA polymerase III polC-type N-terminus I
NIAKO_RS23555	PF11490	DNA polymerase III polC-type N-terminus II
NIAKO_RS23555	PF14579	Helix-hairpin-helix motif
NIAKO_RS23555	PF07733	Bacterial DNA polymerase III alpha NTPase domain
NIAKO_RS23565	PF01098	Cell cycle protein
NIAKO_RS23590	PF02311	AraC-like ligand binding domain
NIAKO_RS23590	PF12833	Helix-turn-helix domain
NIAKO_RS23620	PF00561	alpha/beta hydrolase fold
NIAKO_RS23645	PF00176	SNF2 family N-terminal domain
NIAKO_RS23645	PF00271	Helicase conserved C-terminal domain
NIAKO_RS23655	PF00271	Helicase conserved C-terminal domain
NIAKO_RS23655	PF08494	DEAD/H associated
NIAKO_RS23655	PF00270	DEAD/DEAH box helicase
NIAKO_RS23665	PF09827	CRISPR associated protein Cas2
NIAKO_RS23710	PF00106	short chain dehydrogenase
NIAKO_RS23720	PF00583	Acetyltransferase (GNAT) family
NIAKO_RS23740	PF00072	Response regulator receiver domain
NIAKO_RS23740	PF08769	Sporulation initiation factor Spo0A C terminal
NIAKO_RS23755	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
NIAKO_RS23760	PF00873	AcrB/AcrD/AcrF family
NIAKO_RS23770	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS23770	PF00672	HAMP domain
NIAKO_RS23770	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS23775	PF00486	Transcriptional regulatory protein, C terminal
NIAKO_RS23775	PF00072	Response regulator receiver domain
NIAKO_RS23795	PF01638	HxlR-like helix-turn-helix
NIAKO_RS23800	PF12146	Serine aminopeptidase, S33
NIAKO_RS23810	PF12833	Helix-turn-helix domain
NIAKO_RS23810	PF02311	AraC-like ligand binding domain
NIAKO_RS23830	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
NIAKO_RS23830	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
NIAKO_RS23835	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
NIAKO_RS23845	PF00072	Response regulator receiver domain
NIAKO_RS23845	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS23845	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS23845	PF12833	Helix-turn-helix domain
NIAKO_RS23845	PF07495	Y_Y_Y domain
NIAKO_RS23845	PF07494	Two component regulator propeller
NIAKO_RS23875	PF00248	Aldo/keto reductase family
NIAKO_RS23890	PF02129	X-Pro dipeptidyl-peptidase (S15 family)
NIAKO_RS23895	PF12464	Maltose acetyltransferase 
NIAKO_RS23895	PF14602	Hexapeptide repeat of succinyl-transferase
NIAKO_RS23920	PF00005	ABC transporter
NIAKO_RS24025	PF00722	Glycosyl hydrolases family 16
NIAKO_RS24025	PF02018	Carbohydrate binding domain
NIAKO_RS24035	PF01384	Phosphate transporter family
NIAKO_RS24040	PF07859	alpha/beta hydrolase fold
NIAKO_RS24055	PF12704	MacB-like periplasmic core domain
NIAKO_RS24055	PF02687	FtsX-like permease family
NIAKO_RS24065	PF12833	Helix-turn-helix domain
NIAKO_RS24065	PF12852	Cupin
NIAKO_RS24095	PF00892	EamA-like transporter family
NIAKO_RS24105	PF00999	Sodium/hydrogen exchanger family
NIAKO_RS24115	PF13298	DNA polymerase Ligase (LigD)
NIAKO_RS24115	PF04679	ATP dependent DNA ligase C terminal region        
NIAKO_RS24115	PF01068	ATP dependent DNA ligase domain
NIAKO_RS24125	PF03255	Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
NIAKO_RS24130	PF00701	Dihydrodipicolinate synthetase family
NIAKO_RS24135	PF12706	Beta-lactamase superfamily domain
NIAKO_RS24140	PF03881	Fructosamine kinase
NIAKO_RS24145	PF01467	Cytidylyltransferase-like
NIAKO_RS24145	PF00294	pfkB family carbohydrate kinase
NIAKO_RS24150	PF13520	Amino acid permease
NIAKO_RS24160	PF05000	RNA polymerase Rpb1, domain 4
NIAKO_RS24160	PF04998	RNA polymerase Rpb1, domain 5
NIAKO_RS24160	PF00623	RNA polymerase Rpb1, domain 2
NIAKO_RS24160	PF04983	RNA polymerase Rpb1, domain 3
NIAKO_RS24160	PF04997	RNA polymerase Rpb1, domain 1
NIAKO_RS24165	PF00562	RNA polymerase Rpb2, domain 6
NIAKO_RS24165	PF10385	RNA polymerase beta subunit external 1 domain
NIAKO_RS24165	PF04560	RNA polymerase Rpb2, domain 7
NIAKO_RS24165	PF04565	RNA polymerase Rpb2, domain 3
NIAKO_RS24165	PF04561	RNA polymerase Rpb2, domain 2
NIAKO_RS24165	PF04563	RNA polymerase beta subunit
NIAKO_RS24170	PF07980	SusD family
NIAKO_RS24170	PF14322	Starch-binding associating with outer membrane
NIAKO_RS24175	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS24175	PF00593	TonB dependent receptor
NIAKO_RS24180	PF00356	Bacterial regulatory proteins, lacI family
NIAKO_RS24180	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
NIAKO_RS24185	PF16320	Ribosomal protein L7/L12 dimerisation domain
NIAKO_RS24185	PF00542	Ribosomal protein L7/L12 C-terminal domain
NIAKO_RS24190	PF00466	Ribosomal protein L10
NIAKO_RS24195	PF00687	Ribosomal protein L1p/L10e family
NIAKO_RS24200	PF00298	Ribosomal protein L11, RNA binding domain
NIAKO_RS24200	PF03946	Ribosomal protein L11, N-terminal domain
NIAKO_RS24215	PF02357	Transcription termination factor nusG
NIAKO_RS24215	PF00467	KOW motif
NIAKO_RS24230	PF03143	Elongation factor Tu C-terminal domain
NIAKO_RS24230	PF03144	Elongation factor Tu domain 2
NIAKO_RS24230	PF00009	Elongation factor Tu GTP binding domain
NIAKO_RS24265	PF00589	Phage integrase family
NIAKO_RS24265	PF02899	Phage integrase, N-terminal SAM-like domain
NIAKO_RS24270	PF01165	Ribosomal protein S21
NIAKO_RS24275	PF00677	Lumazine binding domain
NIAKO_RS24280	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
NIAKO_RS24280	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
NIAKO_RS24320	PF00579	tRNA synthetases class I (W and Y)
NIAKO_RS24375	PF04542	Sigma-70 region 2 
NIAKO_RS24375	PF08281	Sigma-70, region 4
NIAKO_RS24385	PF07859	alpha/beta hydrolase fold
NIAKO_RS24390	PF07691	PA14 domain
NIAKO_RS24390	PF12791	Anti-sigma factor N-terminus
NIAKO_RS24410	PF00535	Glycosyl transferase family 2
NIAKO_RS24445	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS24445	PF00593	TonB dependent receptor
NIAKO_RS24505	PF02836	Glycosyl hydrolases family 2, TIM barrel domain
NIAKO_RS24505	PF00703	Glycosyl hydrolases family 2
NIAKO_RS24505	PF02837	Glycosyl hydrolases family 2, sugar binding domain
NIAKO_RS24520	PF00593	TonB dependent receptor
NIAKO_RS24520	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS24525	PF12833	Helix-turn-helix domain
NIAKO_RS24525	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS24525	PF07495	Y_Y_Y domain
NIAKO_RS24525	PF07495	Y_Y_Y domain
NIAKO_RS24525	PF00072	Response regulator receiver domain
NIAKO_RS24525	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS24525	PF00072	Response regulator receiver domain
NIAKO_RS24525	PF07494	Two component regulator propeller
NIAKO_RS24525	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS24525	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS24525	PF07494	Two component regulator propeller
NIAKO_RS24525	PF12833	Helix-turn-helix domain
NIAKO_RS24530	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS24530	PF07495	Y_Y_Y domain
NIAKO_RS24530	PF00072	Response regulator receiver domain
NIAKO_RS24530	PF07494	Two component regulator propeller
NIAKO_RS24530	PF12833	Helix-turn-helix domain
NIAKO_RS24530	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS24540	PF08531	Alpha-L-rhamnosidase N-terminal domain
NIAKO_RS24540	PF17390	Bacterial alpha-L-rhamnosidase C-terminal domain
NIAKO_RS24540	PF17389	Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain
NIAKO_RS24540	PF05592	Bacterial alpha-L-rhamnosidase concanavalin-like domain
NIAKO_RS24615	PF05384	Sensor protein DegS
NIAKO_RS24615	PF07730	Histidine kinase
NIAKO_RS24615	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS24620	PF13302	Acetyltransferase (GNAT) domain
NIAKO_RS24625	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS24625	PF00593	TonB dependent receptor
NIAKO_RS24650	PF08281	Sigma-70, region 4
NIAKO_RS24650	PF04542	Sigma-70 region 2 
NIAKO_RS24670	PF04321	RmlD substrate binding domain
NIAKO_RS24675	PF00908	dTDP-4-dehydrorhamnose 3,5-epimerase
NIAKO_RS24680	PF16363	GDP-mannose 4,6 dehydratase
NIAKO_RS24685	PF01370	NAD dependent epimerase/dehydratase family
NIAKO_RS24690	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
NIAKO_RS24690	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
NIAKO_RS24690	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
NIAKO_RS24695	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
NIAKO_RS24700	PF04413	3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)
NIAKO_RS24710	PF00265	Thymidine kinase
NIAKO_RS24720	PF01578	Cytochrome C assembly protein
NIAKO_RS24730	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
NIAKO_RS24730	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
NIAKO_RS24745	PF10423	Bacterial AMP nucleoside phosphorylase N-terminus 
NIAKO_RS24745	PF01048	Phosphorylase superfamily
NIAKO_RS24755	PF01649	Ribosomal protein S20
NIAKO_RS24760	PF02779	Transketolase, pyrimidine binding domain
NIAKO_RS24760	PF16078	2-oxoglutarate dehydrogenase N-terminus
NIAKO_RS24760	PF16870	2-oxoglutarate dehydrogenase C-terminal
NIAKO_RS24760	PF00676	Dehydrogenase E1 component
NIAKO_RS24765	PF00364	Biotin-requiring enzyme
NIAKO_RS24765	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
NIAKO_RS24765	PF02817	e3 binding domain
NIAKO_RS24775	PF01189	16S rRNA methyltransferase RsmB/F
NIAKO_RS24775	PF01029	NusB family
NIAKO_RS24780	PF00082	Subtilase family
NIAKO_RS24800	PF00436	Single-strand binding protein family
NIAKO_RS24810	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
NIAKO_RS24810	PF10518	TAT (twin-arginine translocation) pathway signal sequence
NIAKO_RS24830	PF00696	Amino acid kinase family
NIAKO_RS24830	PF01842	ACT domain
NIAKO_RS24835	PF13472	GDSL-like Lipase/Acylhydrolase family
NIAKO_RS24835	PF07859	alpha/beta hydrolase fold
NIAKO_RS24840	PF02547	Queuosine biosynthesis protein
NIAKO_RS24855	PF00005	ABC transporter
NIAKO_RS24855	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
NIAKO_RS24860	PF00207	Alpha-2-macroglobulin family
NIAKO_RS24860	PF17962	Bacterial macroglobulin domain 6
NIAKO_RS24860	PF01835	MG2 domain
NIAKO_RS24860	PF07678	A-macroglobulin TED domain
NIAKO_RS24860	PF17972	Bacterial Alpha-2-macroglobulin MG5 domain
NIAKO_RS24860	PF17973	Bacterial Alpha-2-macroglobulin MG10 domain
NIAKO_RS24860	PF17970	Bacterial Alpha-2-macroglobulin MG1 domain 
NIAKO_RS24860	PF07703	Alpha-2-macroglobulin bait region domain
NIAKO_RS24860	PF11974	Bacterial alpha-2-macroglobulin MG3 domain
NIAKO_RS24865	PF06832	Penicillin-Binding Protein C-terminus Family
NIAKO_RS24865	PF00912	Transglycosylase
NIAKO_RS24865	PF00905	Penicillin binding protein transpeptidase domain
NIAKO_RS24880	PF02540	NAD synthase
NIAKO_RS24880	PF00117	Glutamine amidotransferase class-I
NIAKO_RS24880	PF00958	GMP synthase C terminal domain
NIAKO_RS24895	PF04675	DNA ligase N terminus
NIAKO_RS24895	PF01068	ATP dependent DNA ligase domain
NIAKO_RS24895	PF04679	ATP dependent DNA ligase C terminal region        
NIAKO_RS24915	PF00196	Bacterial regulatory proteins, luxR family
NIAKO_RS24915	PF00072	Response regulator receiver domain
NIAKO_RS24920	PF01063	Amino-transferase class IV
NIAKO_RS24925	PF03441	FAD binding domain of DNA photolyase
NIAKO_RS24925	PF00875	DNA photolyase
NIAKO_RS24930	PF01636	Phosphotransferase enzyme family
NIAKO_RS24940	PF02621	Menaquinone biosynthesis
NIAKO_RS24945	PF01048	Phosphorylase superfamily
NIAKO_RS24960	PF01227	GTP cyclohydrolase I
NIAKO_RS24965	PF00698	Acyl transferase domain
NIAKO_RS24980	PF07969	Amidohydrolase family
NIAKO_RS24985	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal  
NIAKO_RS24985	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
NIAKO_RS24990	PF07499	RuvA, C-terminal domain
NIAKO_RS24990	PF01330	RuvA N terminal domain
NIAKO_RS25005	PF00106	short chain dehydrogenase
NIAKO_RS25015	PF12697	Alpha/beta hydrolase family
NIAKO_RS25025	PF00571	CBS domain
NIAKO_RS25025	PF00478	IMP dehydrogenase / GMP reductase domain
NIAKO_RS25040	PF00850	Histone deacetylase domain
NIAKO_RS25055	PF00196	Bacterial regulatory proteins, luxR family
NIAKO_RS25055	PF00072	Response regulator receiver domain
NIAKO_RS25070	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS25070	PF07730	Histidine kinase
NIAKO_RS25075	PF00196	Bacterial regulatory proteins, luxR family
NIAKO_RS25075	PF00072	Response regulator receiver domain
NIAKO_RS25085	PF01144	Coenzyme A transferase
NIAKO_RS25090	PF01144	Coenzyme A transferase
NIAKO_RS25105	PF02441	Flavoprotein
NIAKO_RS25105	PF04127	DNA / pantothenate metabolism flavoprotein
NIAKO_RS25125	PF00348	Polyprenyl synthetase
NIAKO_RS25130	PF10141	Single-strand DNA-specific exonuclease, C terminal domain
NIAKO_RS25130	PF17768	RecJ OB domain
NIAKO_RS25130	PF02272	DHHA1 domain
NIAKO_RS25130	PF01368	DHH family
NIAKO_RS25145	PF00873	AcrB/AcrD/AcrF family
NIAKO_RS25150	PF02321	Outer membrane efflux protein
NIAKO_RS25155	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS25155	PF00183	Hsp90 protein
NIAKO_RS25175	PF01250	Ribosomal protein S6
NIAKO_RS25180	PF01084	Ribosomal protein S18
NIAKO_RS25185	PF01281	Ribosomal protein L9, N-terminal domain
NIAKO_RS25185	PF03948	Ribosomal protein L9, C-terminal domain
NIAKO_RS25190	PF00076	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
NIAKO_RS25195	PF00535	Glycosyl transferase family 2
NIAKO_RS25210	PF10518	TAT (twin-arginine translocation) pathway signal sequence
NIAKO_RS25210	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
NIAKO_RS25215	PF02424	ApbE family
NIAKO_RS25245	PF01416	tRNA pseudouridine synthase
NIAKO_RS25255	PF17432	Domain of unknown function (DUF3458_C) ARM repeats
NIAKO_RS25255	PF11940	Domain of unknown function (DUF3458) Ig-like fold
NIAKO_RS25255	PF01433	Peptidase family M1 domain
NIAKO_RS25265	PF04536	TPM domain
NIAKO_RS25280	PF07995	Glucose / Sorbosone dehydrogenase
NIAKO_RS25295	PF00162	Phosphoglycerate kinase
NIAKO_RS25300	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
NIAKO_RS25300	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
NIAKO_RS25325	PF02625	XdhC and CoxI family
NIAKO_RS25325	PF13478	XdhC Rossmann domain
NIAKO_RS25330	PF02625	XdhC and CoxI family
NIAKO_RS25330	PF13478	XdhC Rossmann domain
NIAKO_RS25340	PF07724	AAA domain (Cdc48 subfamily)
NIAKO_RS25340	PF07728	AAA domain (dynein-related subfamily)
NIAKO_RS25340	PF10431	C-terminal, D2-small domain, of ClpB protein 
NIAKO_RS25350	PF01315	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
NIAKO_RS25350	PF02738	Molybdopterin-binding domain of aldehyde dehydrogenase
NIAKO_RS25355	PF00111	2Fe-2S iron-sulfur cluster binding domain
NIAKO_RS25355	PF01799	[2Fe-2S] binding domain
NIAKO_RS25360	PF03450	CO dehydrogenase flavoprotein C-terminal domain
NIAKO_RS25360	PF00941	FAD binding domain in molybdopterin dehydrogenase
NIAKO_RS25375	PF00106	short chain dehydrogenase
NIAKO_RS25395	PF00067	Cytochrome P450
NIAKO_RS25410	PF03062	MBOAT, membrane-bound O-acyltransferase family
NIAKO_RS25450	PF07859	alpha/beta hydrolase fold
NIAKO_RS25455	PF16864	Dimerisation domain
NIAKO_RS25455	PF00891	O-methyltransferase domain
NIAKO_RS25470	PF08281	Sigma-70, region 4
NIAKO_RS25470	PF04542	Sigma-70 region 2 
NIAKO_RS25485	PF00072	Response regulator receiver domain
NIAKO_RS25485	PF01339	CheB methylesterase
NIAKO_RS25500	PF00012	Hsp70 protein
NIAKO_RS25510	PF00326	Prolyl oligopeptidase family
NIAKO_RS25515	PF00005	ABC transporter
NIAKO_RS25550	PF12833	Helix-turn-helix domain
NIAKO_RS25550	PF02311	AraC-like ligand binding domain
NIAKO_RS25585	PF02687	FtsX-like permease family
NIAKO_RS25585	PF00005	ABC transporter
NIAKO_RS25585	PF12704	MacB-like periplasmic core domain
NIAKO_RS25625	PF07980	SusD family
NIAKO_RS25625	PF14322	Starch-binding associating with outer membrane
NIAKO_RS25630	PF00593	TonB dependent receptor
NIAKO_RS25630	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS25660	PF07690	Major Facilitator Superfamily
NIAKO_RS25680	PF05426	Alginate lyase
NIAKO_RS25680	PF07940	Heparinase II/III-like protein
NIAKO_RS25685	PF14592	Chondroitinase B
NIAKO_RS25690	PF00392	Bacterial regulatory proteins, gntR family
NIAKO_RS25690	PF07729	FCD domain
NIAKO_RS25700	PF14322	Starch-binding associating with outer membrane
NIAKO_RS25700	PF07980	SusD family
NIAKO_RS25705	PF00593	TonB dependent receptor
NIAKO_RS25705	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS25730	PF00474	Sodium:solute symporter family
NIAKO_RS25740	PF00395	S-layer homology domain
NIAKO_RS25740	PF02368	Bacterial Ig-like domain (group 2)
NIAKO_RS25740	PF02638	Glycosyl hydrolase-like 10
NIAKO_RS25750	PF07980	SusD family
NIAKO_RS25750	PF14322	Starch-binding associating with outer membrane
NIAKO_RS25755	PF00593	TonB dependent receptor
NIAKO_RS25755	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS25760	PF07992	Pyridine nucleotide-disulphide oxidoreductase
NIAKO_RS25760	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
NIAKO_RS25770	PF01047	MarR family
NIAKO_RS25770	PF00480	ROK family
NIAKO_RS25780	PF00356	Bacterial regulatory proteins, lacI family
NIAKO_RS25795	PF00356	Bacterial regulatory proteins, lacI family
NIAKO_RS25825	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS25825	PF00593	TonB dependent receptor
NIAKO_RS25855	PF00701	Dihydrodipicolinate synthetase family
NIAKO_RS25890	PF00072	Response regulator receiver domain
NIAKO_RS25890	PF04397	LytTr DNA-binding domain
NIAKO_RS25895	PF07521	Zn-dependent metallo-hydrolase RNA specificity domain
NIAKO_RS25895	PF00753	Metallo-beta-lactamase superfamily
NIAKO_RS25895	PF10996	Beta-Casp domain
NIAKO_RS25905	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
NIAKO_RS25905	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
NIAKO_RS25915	PF00231	ATP synthase
NIAKO_RS25925	PF01975	Survival protein SurE
NIAKO_RS25935	PF02684	Lipid-A-disaccharide synthetase
NIAKO_RS25960	PF00005	ABC transporter
NIAKO_RS25975	PF18764	Nitrous oxide reductase propeller repeat
NIAKO_RS25975	PF18793	Nitrous oxide reductase propeller repeat 2
NIAKO_RS25975	PF13473	Cupredoxin-like domain
NIAKO_RS25990	PF05974	Domain of unknown function (DUF892)
NIAKO_RS26005	PF07690	Major Facilitator Superfamily
NIAKO_RS26010	PF01081	KDPG and KHG aldolase
NIAKO_RS26015	PF00294	pfkB family carbohydrate kinase
NIAKO_RS26020	PF02614	Glucuronate isomerase
NIAKO_RS26025	PF08666	SAF domain
NIAKO_RS26025	PF04295	D-galactarate dehydratase / Altronate hydrolase, C terminus
NIAKO_RS26030	PF08125	Mannitol dehydrogenase C-terminal domain
NIAKO_RS26030	PF01232	Mannitol dehydrogenase Rossmann domain
NIAKO_RS26035	PF07470	Glycosyl Hydrolase Family 88
NIAKO_RS26040	PF00295	Glycosyl hydrolases family 28
NIAKO_RS26045	PF07980	SusD family
NIAKO_RS26045	PF14322	Starch-binding associating with outer membrane
NIAKO_RS26050	PF00593	TonB dependent receptor
NIAKO_RS26050	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS26065	PF17851	Beta xylosidase C-terminal Concanavalin A-like domain 
NIAKO_RS26065	PF04616	Glycosyl hydrolases family 43
NIAKO_RS26070	PF01095	Pectinesterase
NIAKO_RS26075	PF07859	alpha/beta hydrolase fold
NIAKO_RS26075	PF00331	Glycosyl hydrolase family 10
NIAKO_RS26080	PF01095	Pectinesterase
NIAKO_RS26085	PF13472	GDSL-like Lipase/Acylhydrolase family
NIAKO_RS26100	PF07980	SusD family
NIAKO_RS26100	PF14322	Starch-binding associating with outer membrane
NIAKO_RS26105	PF00593	TonB dependent receptor
NIAKO_RS26105	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS26110	PF00356	Bacterial regulatory proteins, lacI family
NIAKO_RS26115	PF06026	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
NIAKO_RS26120	PF00155	Aminotransferase class I and II
NIAKO_RS26120	PF00392	Bacterial regulatory proteins, gntR family
NIAKO_RS26125	PF12804	MobA-like NTP transferase domain
NIAKO_RS26135	PF00258	Flavodoxin
NIAKO_RS26135	PF00301	Rubredoxin
NIAKO_RS26135	PF00753	Metallo-beta-lactamase superfamily
NIAKO_RS26140	PF00384	Molybdopterin oxidoreductase
NIAKO_RS26140	PF01568	Molydopterin dinucleotide binding domain
NIAKO_RS26140	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
NIAKO_RS26145	PF07690	Major Facilitator Superfamily
NIAKO_RS26160	PF04324	BFD-like [2Fe-2S] binding domain
NIAKO_RS26160	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
NIAKO_RS26160	PF07992	Pyridine nucleotide-disulphide oxidoreductase
NIAKO_RS26160	PF18267	Rubredoxin NAD+ reductase C-terminal domain
NIAKO_RS26160	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
NIAKO_RS26165	PF13545	Crp-like helix-turn-helix domain
NIAKO_RS26165	PF00027	Cyclic nucleotide-binding domain
NIAKO_RS26170	PF10414	Sirohaem synthase dimerisation region
NIAKO_RS26170	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
NIAKO_RS26190	PF18496	Collagenase G catalytic helper subdomain
NIAKO_RS26190	PF01752	Collagenase
NIAKO_RS26190	PF08453	Peptidase family M9 N-terminal
NIAKO_RS26200	PF00132	Bacterial transferase hexapeptide (six repeats)
NIAKO_RS26200	PF06426	Serine acetyltransferase, N-terminal 
NIAKO_RS26210	PF02719	Polysaccharide biosynthesis protein
NIAKO_RS26220	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
NIAKO_RS26225	PF17836	PglD N-terminal domain
NIAKO_RS26225	PF00132	Bacterial transferase hexapeptide (six repeats)
NIAKO_RS26230	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
NIAKO_RS26235	PF02397	Bacterial sugar transferase
NIAKO_RS26240	PF00534	Glycosyl transferases group 1
NIAKO_RS26240	PF13477	Glycosyl transferase 4-like
NIAKO_RS26270	PF00534	Glycosyl transferases group 1
NIAKO_RS26270	PF13439	Glycosyltransferase Family 4
NIAKO_RS26310	PF08889	WbqC-like protein family
NIAKO_RS26315	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
NIAKO_RS26320	PF00664	ABC transporter transmembrane region
NIAKO_RS26320	PF00005	ABC transporter
NIAKO_RS26325	PF02706	Chain length determinant protein
NIAKO_RS26325	PF13807	G-rich domain on putative tyrosine kinase
NIAKO_RS26325	PF13614	AAA domain
NIAKO_RS26335	PF01370	NAD dependent epimerase/dehydratase family
NIAKO_RS26340	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
NIAKO_RS26340	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
NIAKO_RS26340	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
NIAKO_RS26350	PF03786	D-mannonate dehydratase (UxuA)
NIAKO_RS26355	PF00356	Bacterial regulatory proteins, lacI family
NIAKO_RS26370	PF12833	Helix-turn-helix domain
NIAKO_RS26370	PF07883	Cupin domain
NIAKO_RS26380	PF04074	YhcH/YjgK/YiaL
NIAKO_RS26390	PF07470	Glycosyl Hydrolase Family 88
NIAKO_RS26405	PF17137	Domain of unknown function (DUF5110)
NIAKO_RS26405	PF13802	Galactose mutarotase-like
NIAKO_RS26405	PF16338	Domain of unknown function (DUF4968)
NIAKO_RS26405	PF01055	Glycosyl hydrolases family 31 
NIAKO_RS26415	PF16355	Domain of unknown function (DUF4982)
NIAKO_RS26415	PF00703	Glycosyl hydrolases family 2
NIAKO_RS26415	PF02836	Glycosyl hydrolases family 2, TIM barrel domain
NIAKO_RS26415	PF02837	Glycosyl hydrolases family 2, sugar binding domain
NIAKO_RS26425	PF07980	SusD family
NIAKO_RS26425	PF14322	Starch-binding associating with outer membrane
NIAKO_RS26430	PF00593	TonB dependent receptor
NIAKO_RS26430	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS26440	PF16874	Glycosyl hydrolase family 36 C-terminal domain
NIAKO_RS26440	PF16875	Glycosyl hydrolase family 36 N-terminal domain
NIAKO_RS26450	PF01928	CYTH domain
NIAKO_RS26455	PF13419	Haloacid dehalogenase-like hydrolase
NIAKO_RS26480	PF14508	Glycosyl-hydrolase 97 N-terminal
NIAKO_RS26480	PF14509	Glycosyl-hydrolase 97 C-terminal, oligomerisation
NIAKO_RS26480	PF10566	Glycoside hydrolase 97  
NIAKO_RS26505	PF00593	TonB dependent receptor
NIAKO_RS26505	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS26510	PF00295	Glycosyl hydrolases family 28
NIAKO_RS26525	PF07980	SusD family
NIAKO_RS26525	PF14322	Starch-binding associating with outer membrane
NIAKO_RS26530	PF00593	TonB dependent receptor
NIAKO_RS26530	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS26540	PF00717	Peptidase S24-like
NIAKO_RS26545	PF00817	impB/mucB/samB family
NIAKO_RS26545	PF11799	impB/mucB/samB family C-terminal domain
NIAKO_RS26545	PF13438	Domain of unknown function (DUF4113)
NIAKO_RS26570	PF00557	Metallopeptidase family M24
NIAKO_RS26570	PF05195	Aminopeptidase P, N-terminal domain
NIAKO_RS26700	PF18339	RapA N-terminal Tudor like domain 1
NIAKO_RS26700	PF00271	Helicase conserved C-terminal domain
NIAKO_RS26700	PF12137	RNA polymerase recycling family C-terminal
NIAKO_RS26700	PF00176	SNF2 family N-terminal domain
NIAKO_RS26700	PF18337	RapA N-terminal Tudor like domain
NIAKO_RS26740	PF01177	Asp/Glu/Hydantoin racemase
NIAKO_RS26775	PF02566	OsmC-like protein
NIAKO_RS26790	PF07694	5TMR of 5TMR-LYT
NIAKO_RS26790	PF13492	GAF domain
NIAKO_RS26790	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS26790	PF06580	Histidine kinase
NIAKO_RS26795	PF00072	Response regulator receiver domain
NIAKO_RS26795	PF04397	LytTr DNA-binding domain
NIAKO_RS26835	PF00285	Citrate synthase, C-terminal domain
NIAKO_RS26850	PF01702	Queuine tRNA-ribosyltransferase
NIAKO_RS26860	PF02527	rRNA small subunit methyltransferase G
NIAKO_RS26865	PF00196	Bacterial regulatory proteins, luxR family
NIAKO_RS26865	PF00072	Response regulator receiver domain
NIAKO_RS26880	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
NIAKO_RS26895	PF01066	CDP-alcohol phosphatidyltransferase
NIAKO_RS26900	PF00557	Metallopeptidase family M24
NIAKO_RS26900	PF05195	Aminopeptidase P, N-terminal domain
NIAKO_RS26905	PF01293	Phosphoenolpyruvate carboxykinase
NIAKO_RS26915	PF01712	Deoxynucleoside kinase
NIAKO_RS26920	PF00579	tRNA synthetases class I (W and Y)
NIAKO_RS26925	PF02686	Glu-tRNAGln amidotransferase C subunit
NIAKO_RS26930	PF00005	ABC transporter
NIAKO_RS26935	PF01923	Cobalamin adenosyltransferase
NIAKO_RS26940	PF00005	ABC transporter
NIAKO_RS26955	PF02463	RecF/RecN/SMC N terminal domain
NIAKO_RS26970	PF01784	NIF3 (NGG1p interacting factor 3)
NIAKO_RS26990	PF08267	Cobalamin-independent synthase, N-terminal domain
NIAKO_RS26990	PF01717	Cobalamin-independent synthase, Catalytic domain
NIAKO_RS26995	PF00317	Ribonucleotide reductase, all-alpha domain
NIAKO_RS26995	PF02867	Ribonucleotide reductase, barrel domain
NIAKO_RS26995	PF03477	ATP cone domain
NIAKO_RS27005	PF02074	Carboxypeptidase Taq (M32) metallopeptidase
NIAKO_RS27015	PF18496	Collagenase G catalytic helper subdomain
NIAKO_RS27015	PF01752	Collagenase
NIAKO_RS27015	PF08453	Peptidase family M9 N-terminal
NIAKO_RS27040	PF00578	AhpC/TSA family
NIAKO_RS27050	PF10672	S-adenosylmethionine-dependent methyltransferase
NIAKO_RS27050	PF17785	PUA-like domain
NIAKO_RS27065	PF00593	TonB dependent receptor
NIAKO_RS27065	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS27070	PF01025	GrpE
NIAKO_RS27075	PF00684	DnaJ central domain
NIAKO_RS27075	PF01556	DnaJ C terminal domain
NIAKO_RS27075	PF00226	DnaJ domain
NIAKO_RS27080	PF12034	Domain of unknown function (DUF3520)
NIAKO_RS27080	PF12450	von Willebrand factor 
NIAKO_RS27080	PF00092	von Willebrand factor type A domain
NIAKO_RS27085	PF00156	Phosphoribosyl transferase domain
NIAKO_RS27095	PF01596	O-methyltransferase
NIAKO_RS27100	PF00474	Sodium:solute symporter family
NIAKO_RS27105	PF03641	Possible lysine decarboxylase
NIAKO_RS27125	PF02823	ATP synthase, Delta/Epsilon chain, beta-sandwich domain
NIAKO_RS27130	PF02874	ATP synthase alpha/beta family, beta-barrel domain
NIAKO_RS27130	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
NIAKO_RS27145	PF00873	AcrB/AcrD/AcrF family
NIAKO_RS27160	PF00440	Bacterial regulatory proteins, tetR family
NIAKO_RS27160	PF08359	YsiA-like protein, C-terminal region
NIAKO_RS27165	PF12169	DNA polymerase III subunits gamma and tau domain III
NIAKO_RS27175	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
NIAKO_RS27175	PF00364	Biotin-requiring enzyme
NIAKO_RS27175	PF02817	e3 binding domain
NIAKO_RS27200	PF02797	Chalcone and stilbene synthases, C-terminal domain
NIAKO_RS27200	PF00195	Chalcone and stilbene synthases, N-terminal domain
NIAKO_RS27210	PF01266	FAD dependent oxidoreductase
NIAKO_RS27210	PF16901	C-terminal domain of alpha-glycerophosphate oxidase
NIAKO_RS27240	PF08338	Domain of unknown function (DUF1731)
NIAKO_RS27240	PF01370	NAD dependent epimerase/dehydratase family
NIAKO_RS27265	PF01926	50S ribosome-binding GTPase
NIAKO_RS27270	PF01209	ubiE/COQ5 methyltransferase family
NIAKO_RS27290	PF07568	Histidine kinase
NIAKO_RS27290	PF12282	Signal transduction histidine kinase
NIAKO_RS27290	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS27295	PF00072	Response regulator receiver domain
NIAKO_RS27295	PF03861	ANTAR domain
NIAKO_RS27305	PF01979	Amidohydrolase family
NIAKO_RS27310	PF01624	MutS domain I
NIAKO_RS27310	PF05190	MutS family domain IV
NIAKO_RS27310	PF05188	MutS domain II
NIAKO_RS27310	PF05192	MutS domain III
NIAKO_RS27310	PF00488	MutS domain V
NIAKO_RS27315	PF11838	ERAP1-like C-terminal domain
NIAKO_RS27315	PF01433	Peptidase family M1 domain
NIAKO_RS27320	PF13335	Magnesium chelatase, subunit ChlI C-terminal
NIAKO_RS27320	PF01078	Magnesium chelatase, subunit ChlI
NIAKO_RS27325	PF02397	Bacterial sugar transferase
NIAKO_RS27335	PF00534	Glycosyl transferases group 1
NIAKO_RS27335	PF13439	Glycosyltransferase Family 4
NIAKO_RS27345	PF00535	Glycosyl transferase family 2
NIAKO_RS27350	PF00456	Transketolase, thiamine diphosphate binding domain
NIAKO_RS27355	PF02780	Transketolase, C-terminal domain
NIAKO_RS27355	PF02779	Transketolase, pyrimidine binding domain
NIAKO_RS27355	PF13292	1-deoxy-D-xylulose-5-phosphate synthase
NIAKO_RS27360	PF00535	Glycosyl transferase family 2
NIAKO_RS27365	PF08468	Methyltransferase small domain N-terminal
NIAKO_RS27365	PF05175	Methyltransferase small domain
NIAKO_RS27395	PF01501	Glycosyl transferase family 8
NIAKO_RS27395	PF00535	Glycosyl transferase family 2
NIAKO_RS27400	PF01061	ABC-2 type transporter
NIAKO_RS27405	PF01476	LysM domain
NIAKO_RS27405	PF00005	ABC transporter
NIAKO_RS27430	PF01943	Polysaccharide biosynthesis protein
NIAKO_RS27450	PF00005	ABC transporter
NIAKO_RS27450	PF00664	ABC transporter transmembrane region
NIAKO_RS27465	PF17678	Glycosyl hydrolase family 92 N-terminal domain
NIAKO_RS27465	PF07971	Glycosyl hydrolase family 92
NIAKO_RS27470	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS27470	PF00672	HAMP domain
NIAKO_RS27470	PF00989	PAS fold
NIAKO_RS27470	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS27470	PF18698	Histidine kinase sensor domain
NIAKO_RS27480	PF00196	Bacterial regulatory proteins, luxR family
NIAKO_RS27480	PF00072	Response regulator receiver domain
NIAKO_RS27495	PF02803	Thiolase, C-terminal domain
NIAKO_RS27495	PF00108	Thiolase, N-terminal domain
NIAKO_RS27500	PF01180	Dihydroorotate dehydrogenase
NIAKO_RS27505	PF03741	Integral membrane protein TerC family
NIAKO_RS27515	PF00772	DnaB-like helicase N terminal domain
NIAKO_RS27515	PF03796	DnaB-like helicase C terminal domain
NIAKO_RS27525	PF03147	Ferredoxin-fold anticodon binding domain
NIAKO_RS27525	PF01588	Putative tRNA binding domain
NIAKO_RS27525	PF17759	Phenylalanyl tRNA synthetase beta chain CLM domain
NIAKO_RS27525	PF03483	B3/4 domain
NIAKO_RS27525	PF03484	tRNA synthetase B5 domain
NIAKO_RS27545	PF00013	KH domain
NIAKO_RS27545	PF12072	Domain of unknown function (DUF3552)
NIAKO_RS27545	PF01966	HD domain
NIAKO_RS27550	PF01245	Ribosomal protein L19
NIAKO_RS27555	PF02416	mttA/Hcf106 family
NIAKO_RS27560	PF01425	Amidase
NIAKO_RS27565	PF01464	Transglycosylase SLT domain
NIAKO_RS27565	PF10145	Phage-related minor tail protein
NIAKO_RS27565	PF01551	Peptidase family M23
NIAKO_RS27570	PF00425	chorismate binding enzyme
NIAKO_RS27570	PF04715	Anthranilate synthase component I, N terminal region
NIAKO_RS27580	PF00709	Adenylosuccinate synthetase
NIAKO_RS27585	PF02824	TGS domain
NIAKO_RS27585	PF04607	Region found in RelA / SpoT proteins
NIAKO_RS27585	PF13291	ACT domain
NIAKO_RS27605	PF05697	Bacterial trigger factor protein (TF)
NIAKO_RS27605	PF05698	Bacterial trigger factor protein (TF) C-terminus
NIAKO_RS27615	PF00082	Subtilase family
NIAKO_RS27625	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS27625	PF00593	TonB dependent receptor
NIAKO_RS27665	PF00487	Fatty acid desaturase
NIAKO_RS27675	PF01026	TatD related DNase
NIAKO_RS27685	PF01522	Polysaccharide deacetylase
NIAKO_RS27695	PF00749	tRNA synthetases class I (E and Q), catalytic domain
NIAKO_RS27705	PF02310	B12 binding domain
NIAKO_RS27705	PF01642	Methylmalonyl-CoA mutase
NIAKO_RS27710	PF00378	Enoyl-CoA hydratase/isomerase
NIAKO_RS27715	PF00356	Bacterial regulatory proteins, lacI family
NIAKO_RS27720	PF10415	Fumarase C C-terminus
NIAKO_RS27720	PF00206	Lyase
NIAKO_RS27725	PF01252	Signal peptidase (SPase) II
NIAKO_RS27730	PF00842	Alanine racemase, C-terminal domain
NIAKO_RS27730	PF01168	Alanine racemase, N-terminal domain
NIAKO_RS27735	PF03741	Integral membrane protein TerC family
NIAKO_RS27750	PF01521	Iron-sulphur cluster biosynthesis
NIAKO_RS27755	PF00266	Aminotransferase class-V
NIAKO_RS27775	PF14622	Ribonuclease-III-like
NIAKO_RS27775	PF00035	Double-stranded RNA binding motif
NIAKO_RS27780	PF00109	Beta-ketoacyl synthase, N-terminal domain
NIAKO_RS27780	PF02801	Beta-ketoacyl synthase, C-terminal domain
NIAKO_RS27785	PF00550	Phosphopantetheine attachment site
NIAKO_RS27790	PF13673	Acetyltransferase (GNAT) domain
NIAKO_RS27795	PF00271	Helicase conserved C-terminal domain
NIAKO_RS27795	PF17757	UvrB interaction domain
NIAKO_RS27795	PF03461	TRCF domain
NIAKO_RS27795	PF00270	DEAD/DEAH box helicase
NIAKO_RS27795	PF02559	CarD-like/TRCF domain
NIAKO_RS27800	PF00175	Oxidoreductase NAD-binding domain 
NIAKO_RS27800	PF00970	Oxidoreductase FAD-binding domain
NIAKO_RS27810	PF03129	Anticodon binding domain
NIAKO_RS27820	PF03819	MazG nucleotide pyrophosphohydrolase domain
NIAKO_RS27825	PF02580	D-Tyr-tRNA(Tyr) deacylase
NIAKO_RS27830	PF00472	RF-1 domain
NIAKO_RS27840	PF03150	Di-haem cytochrome c peroxidase
NIAKO_RS27855	PF00753	Metallo-beta-lactamase superfamily
NIAKO_RS27920	PF00202	Aminotransferase class-III
NIAKO_RS27925	PF00132	Bacterial transferase hexapeptide (six repeats)
NIAKO_RS27935	PF16745	RsgA N-terminal domain
NIAKO_RS27935	PF03193	RsgA GTPase
NIAKO_RS27950	PF01882	Protein of unknown function DUF58
NIAKO_RS27955	PF07726	ATPase family associated with various cellular activities (AAA)
NIAKO_RS27955	PF17863	AAA lid domain
NIAKO_RS27970	PF02540	NAD synthase
NIAKO_RS27970	PF00795	Carbon-nitrogen hydrolase
NIAKO_RS27990	PF08471	Class II vitamin B12-dependent ribonucleotide reductase
NIAKO_RS27990	PF02867	Ribonucleotide reductase, barrel domain
NIAKO_RS28000	PF01884	PcrB family
NIAKO_RS28015	PF00764	Arginosuccinate synthase
NIAKO_RS28025	PF00202	Aminotransferase class-III
NIAKO_RS28030	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
NIAKO_RS28030	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
NIAKO_RS28035	PF00696	Amino acid kinase family
NIAKO_RS28040	PF01546	Peptidase family M20/M25/M40
NIAKO_RS28040	PF07687	Peptidase dimerisation domain
NIAKO_RS28045	PF00206	Lyase
NIAKO_RS28055	PF04397	LytTr DNA-binding domain
NIAKO_RS28055	PF00072	Response regulator receiver domain
NIAKO_RS28060	PF07694	5TMR of 5TMR-LYT
NIAKO_RS28060	PF13492	GAF domain
NIAKO_RS28060	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS28060	PF06580	Histidine kinase
NIAKO_RS28065	PF02780	Transketolase, C-terminal domain
NIAKO_RS28065	PF02779	Transketolase, pyrimidine binding domain
NIAKO_RS28065	PF13292	1-deoxy-D-xylulose-5-phosphate synthase
NIAKO_RS28075	PF02616	Segregation and condensation protein ScpA
NIAKO_RS28085	PF01741	Large-conductance mechanosensitive channel, MscL
NIAKO_RS28090	PF03976	Polyphosphate kinase 2 (PPK2)
NIAKO_RS28095	PF00892	EamA-like transporter family
NIAKO_RS28100	PF01765	Ribosome recycling factor
NIAKO_RS28105	PF00953	Glycosyl transferase family 4
NIAKO_RS28110	PF02780	Transketolase, C-terminal domain
NIAKO_RS28110	PF02779	Transketolase, pyrimidine binding domain
NIAKO_RS28110	PF00456	Transketolase, thiamine diphosphate binding domain
NIAKO_RS28120	PF12704	MacB-like periplasmic core domain
NIAKO_RS28120	PF02687	FtsX-like permease family
NIAKO_RS28125	PF02033	Ribosome-binding factor A
NIAKO_RS28130	PF00664	ABC transporter transmembrane region
NIAKO_RS28130	PF00005	ABC transporter
NIAKO_RS28135	PF00326	Prolyl oligopeptidase family
NIAKO_RS28135	PF00930	Dipeptidyl peptidase IV (DPP IV) N-terminal region
NIAKO_RS28145	PF00133	tRNA synthetases class I (I, L, M and V)
NIAKO_RS28145	PF08264	Anticodon-binding domain of tRNA
NIAKO_RS28155	PF03653	Uncharacterised protein family (UPF0093)
NIAKO_RS28160	PF00762	Ferrochelatase
NIAKO_RS28165	PF05201	Glutamyl-tRNAGlu reductase, N-terminal domain
NIAKO_RS28165	PF00745	Glutamyl-tRNAGlu reductase, dimerisation domain
NIAKO_RS28165	PF01488	Shikimate / quinate 5-dehydrogenase
NIAKO_RS28170	PF01379	Porphobilinogen deaminase, dipyromethane cofactor binding domain
NIAKO_RS28170	PF03900	Porphobilinogen deaminase, C-terminal domain
NIAKO_RS28180	PF01208	Uroporphyrinogen decarboxylase (URO-D)
NIAKO_RS28185	PF01218	Coproporphyrinogen III oxidase
NIAKO_RS28190	PF00490	Delta-aminolevulinic acid dehydratase
NIAKO_RS28195	PF00202	Aminotransferase class-III
NIAKO_RS28215	PF01476	LysM domain
NIAKO_RS28215	PF01551	Peptidase family M23
NIAKO_RS28215	PF08525	Opacity-associated protein A N-terminal motif
NIAKO_RS28220	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
NIAKO_RS28220	PF02272	DHHA1 domain
NIAKO_RS28220	PF01411	tRNA synthetases class II (A)
NIAKO_RS28225	PF02225	PA domain
NIAKO_RS28225	PF04389	Peptidase family M28
NIAKO_RS28230	PF13180	PDZ domain
NIAKO_RS28235	PF02637	GatB domain
NIAKO_RS28235	PF02934	GatB/GatE catalytic domain
NIAKO_RS28245	PF14322	Starch-binding associating with outer membrane
NIAKO_RS28245	PF07980	SusD family
NIAKO_RS28250	PF00593	TonB dependent receptor
NIAKO_RS28250	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS28265	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS28265	PF00593	TonB dependent receptor
NIAKO_RS28280	PF02565	Recombination protein O C terminal
NIAKO_RS28280	PF11967	Recombination protein O N terminal
NIAKO_RS28285	PF01979	Amidohydrolase family
NIAKO_RS28290	PF03462	PCRF domain
NIAKO_RS28290	PF00472	RF-1 domain
NIAKO_RS28310	PF01597	Glycine cleavage H-protein
NIAKO_RS28315	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
NIAKO_RS28330	PF02403	Seryl-tRNA synthetase N-terminal domain
NIAKO_RS28330	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
NIAKO_RS28355	PF01751	Toprim domain
NIAKO_RS28355	PF00204	DNA gyrase B
NIAKO_RS28370	PF00924	Mechanosensitive ion channel
NIAKO_RS28380	PF00149	Calcineurin-like phosphoesterase
NIAKO_RS28390	PF02589	LUD domain
NIAKO_RS28395	PF06480	FtsH Extracellular
NIAKO_RS28395	PF00004	ATPase family associated with various cellular activities (AAA)
NIAKO_RS28395	PF01434	Peptidase family M41
NIAKO_RS28395	PF17862	AAA+ lid domain
NIAKO_RS28430	PF01325	Iron dependent repressor, N-terminal DNA binding domain
NIAKO_RS28430	PF00480	ROK family
NIAKO_RS28435	PF00578	AhpC/TSA family
NIAKO_RS28450	PF02142	MGS-like domain
NIAKO_RS28450	PF02787	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
NIAKO_RS28450	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
NIAKO_RS28455	PF00196	Bacterial regulatory proteins, luxR family
NIAKO_RS28455	PF00072	Response regulator receiver domain
NIAKO_RS28460	PF07730	Histidine kinase
NIAKO_RS28460	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS28460	PF00672	HAMP domain
NIAKO_RS28475	PF13567	Domain of unknown function (DUF4131)
NIAKO_RS28475	PF00753	Metallo-beta-lactamase superfamily
NIAKO_RS28475	PF03772	Competence protein
NIAKO_RS28480	PF02142	MGS-like domain
NIAKO_RS28480	PF01808	AICARFT/IMPCHase bienzyme
NIAKO_RS28490	PF11870	Domain of unknown function (DUF3390)
NIAKO_RS28490	PF13183	4Fe-4S dicluster domain
NIAKO_RS28490	PF02589	LUD domain
NIAKO_RS28505	PF03471	Transporter associated domain
NIAKO_RS28505	PF00571	CBS domain
NIAKO_RS28510	PF00436	Single-strand binding protein family
NIAKO_RS28515	PF00633	Helix-hairpin-helix motif
NIAKO_RS28515	PF14815	NUDIX domain
NIAKO_RS28515	PF00730	HhH-GPD superfamily base excision DNA repair protein
NIAKO_RS28520	PF00216	Bacterial DNA-binding protein
NIAKO_RS28530	PF00575	S1 RNA binding domain
NIAKO_RS28530	PF10150	Ribonuclease E/G family
NIAKO_RS28540	PF18073	Rubredoxin metal binding domain
NIAKO_RS28545	PF00156	Phosphoribosyl transferase domain
NIAKO_RS28555	PF00255	Glutathione peroxidase
NIAKO_RS28560	PF09115	DNA polymerase III, delta subunit, C terminal
NIAKO_RS28565	PF04468	PSP1 C-terminal conserved region
NIAKO_RS28580	PF00675	Insulinase (Peptidase family M16)
NIAKO_RS28580	PF05193	Peptidase M16 inactive domain
NIAKO_RS28585	PF00873	AcrB/AcrD/AcrF family
NIAKO_RS28600	PF00440	Bacterial regulatory proteins, tetR family
NIAKO_RS28600	PF17932	Tetracyclin repressor-like, C-terminal domain
NIAKO_RS28615	PF00266	Aminotransferase class-V
NIAKO_RS28630	PF00501	AMP-binding enzyme
NIAKO_RS28635	PF00282	Pyridoxal-dependent decarboxylase conserved domain
NIAKO_RS28640	PF01063	Amino-transferase class IV
NIAKO_RS28660	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS28660	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS28660	PF00672	HAMP domain
NIAKO_RS28665	PF00072	Response regulator receiver domain
NIAKO_RS28665	PF00486	Transcriptional regulatory protein, C terminal
NIAKO_RS28670	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
NIAKO_RS28670	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
NIAKO_RS28675	PF08769	Sporulation initiation factor Spo0A C terminal
NIAKO_RS28675	PF00072	Response regulator receiver domain
NIAKO_RS28695	PF00072	Response regulator receiver domain
NIAKO_RS28715	PF04963	Sigma-54 factor, core binding domain
NIAKO_RS28715	PF04552	Sigma-54, DNA binding domain
NIAKO_RS28715	PF00309	Sigma-54 factor, Activator interacting domain (AID) 
NIAKO_RS28720	PF02954	Bacterial regulatory protein, Fis family
NIAKO_RS28720	PF00158	Sigma-54 interaction domain
NIAKO_RS28720	PF00072	Response regulator receiver domain
NIAKO_RS28725	PF00360	Phytochrome region
NIAKO_RS28725	PF08446	PAS fold
NIAKO_RS28725	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS28725	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS28725	PF01590	GAF domain
NIAKO_RS28730	PF00989	PAS fold
NIAKO_RS28730	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS28730	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS28745	PF01103	Surface antigen
NIAKO_RS28745	PF07244	Surface antigen variable number repeat
NIAKO_RS28755	PF03631	Virulence factor BrkB
NIAKO_RS28770	PF07859	alpha/beta hydrolase fold
NIAKO_RS28790	PF05974	Domain of unknown function (DUF892)
NIAKO_RS28850	PF00005	ABC transporter
NIAKO_RS28875	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
NIAKO_RS28890	PF01799	[2Fe-2S] binding domain
NIAKO_RS28890	PF00111	2Fe-2S iron-sulfur cluster binding domain
NIAKO_RS28895	PF13442	Cytochrome C oxidase, cbb3-type, subunit III 
NIAKO_RS28895	PF02738	Molybdopterin-binding domain of aldehyde dehydrogenase
NIAKO_RS28895	PF00034	Cytochrome c
NIAKO_RS28910	PF00296	Luciferase-like monooxygenase
NIAKO_RS28915	PF03747	ADP-ribosylglycohydrolase
NIAKO_RS28920	PF01885	RNA 2'-phosphotransferase, Tpt1 / KptA family
NIAKO_RS28925	PF03747	ADP-ribosylglycohydrolase
NIAKO_RS28965	PF09297	NADH pyrophosphatase zinc ribbon domain
NIAKO_RS28965	PF00293	NUDIX domain
NIAKO_RS28990	PF05762	VWA domain containing CoxE-like protein
NIAKO_RS29000	PF07728	AAA domain (dynein-related subfamily)
NIAKO_RS29030	PF12592	Protein of unknown function (DUF3763)
NIAKO_RS29030	PF07728	AAA domain (dynein-related subfamily)
NIAKO_RS29030	PF17868	AAA lid domain
NIAKO_RS29050	PF00210	Ferritin-like domain
NIAKO_RS29055	PF05726	Pirin C-terminal cupin domain
NIAKO_RS29055	PF02678	Pirin
NIAKO_RS29065	PF00550	Phosphopantetheine attachment site
NIAKO_RS29070	PF07995	Glucose / Sorbosone dehydrogenase
NIAKO_RS29080	PF00155	Aminotransferase class I and II
NIAKO_RS29100	PF12833	Helix-turn-helix domain
NIAKO_RS29100	PF02805	Metal binding domain of Ada
NIAKO_RS29110	PF01022	Bacterial regulatory protein, arsR family
NIAKO_RS29160	PF00196	Bacterial regulatory proteins, luxR family
NIAKO_RS29160	PF00072	Response regulator receiver domain
NIAKO_RS29170	PF00682	HMGL-like
NIAKO_RS29170	PF00364	Biotin-requiring enzyme
NIAKO_RS29170	PF02436	Conserved carboxylase domain
NIAKO_RS29175	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
NIAKO_RS29175	PF02785	Biotin carboxylase C-terminal domain
NIAKO_RS29175	PF00289	Biotin carboxylase, N-terminal domain
NIAKO_RS29180	PF01039	Carboxyl transferase domain
NIAKO_RS29220	PF10127	RNA repair pathway DNA polymerase beta family
NIAKO_RS29255	PF14322	Starch-binding associating with outer membrane
NIAKO_RS29255	PF07980	SusD family
NIAKO_RS29260	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS29260	PF00593	TonB dependent receptor
NIAKO_RS29295	PF00106	short chain dehydrogenase
NIAKO_RS29300	PF00106	short chain dehydrogenase
NIAKO_RS29320	PF07694	5TMR of 5TMR-LYT
NIAKO_RS29320	PF06580	Histidine kinase
NIAKO_RS29325	PF04397	LytTr DNA-binding domain
NIAKO_RS29325	PF00072	Response regulator receiver domain
NIAKO_RS29345	PF00295	Glycosyl hydrolases family 28
NIAKO_RS29360	PF00072	Response regulator receiver domain
NIAKO_RS29365	PF08448	PAS fold
NIAKO_RS29365	PF01339	CheB methylesterase
NIAKO_RS29365	PF01739	CheR methyltransferase, SAM binding domain
NIAKO_RS29365	PF03705	CheR methyltransferase, all-alpha domain
NIAKO_RS29370	PF00360	Phytochrome region
NIAKO_RS29370	PF08446	PAS fold
NIAKO_RS29370	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS29370	PF01590	GAF domain
NIAKO_RS29370	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS29375	PF01494	FAD binding domain
NIAKO_RS29395	PF01965	DJ-1/PfpI family
NIAKO_RS29580	PF02899	Phage integrase, N-terminal SAM-like domain
NIAKO_RS29580	PF00589	Phage integrase family
NIAKO_RS29610	PF00072	Response regulator receiver domain
NIAKO_RS29610	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS29610	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS29610	PF01627	Hpt domain
NIAKO_RS29610	PF09984	Uncharacterised signal transduction histidine kinase domain (DUF2222)
NIAKO_RS29610	PF00672	HAMP domain
NIAKO_RS29615	PF00072	Response regulator receiver domain
NIAKO_RS29615	PF02954	Bacterial regulatory protein, Fis family
NIAKO_RS29615	PF00158	Sigma-54 interaction domain
NIAKO_RS29620	PF00580	UvrD/REP helicase N-terminal domain
NIAKO_RS29620	PF13361	UvrD-like helicase C-terminal domain
NIAKO_RS29630	PF02132	RecR protein
NIAKO_RS29630	PF13662	Toprim domain
NIAKO_RS29635	PF02607	B12 binding domain
NIAKO_RS29635	PF02310	B12 binding domain
NIAKO_RS29635	PF02574	Homocysteine S-methyltransferase
NIAKO_RS29635	PF00809	Pterin binding enzyme
NIAKO_RS29635	PF02965	Vitamin B12 dependent methionine synthase, activation domain
NIAKO_RS29640	PF02574	Homocysteine S-methyltransferase
NIAKO_RS29640	PF00809	Pterin binding enzyme
NIAKO_RS29640	PF02965	Vitamin B12 dependent methionine synthase, activation domain
NIAKO_RS29640	PF02607	B12 binding domain
NIAKO_RS29640	PF02310	B12 binding domain
NIAKO_RS29650	PF03641	Possible lysine decarboxylase
NIAKO_RS29655	PF03372	Endonuclease/Exonuclease/phosphatase family
NIAKO_RS29665	PF00216	Bacterial DNA-binding protein
NIAKO_RS29670	PF10590	Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region
NIAKO_RS29670	PF01243	Pyridoxamine 5'-phosphate oxidase
NIAKO_RS29685	PF00696	Amino acid kinase family
NIAKO_RS29690	PF00889	Elongation factor TS
NIAKO_RS29695	PF00318	Ribosomal protein S2
NIAKO_RS29700	PF00380	Ribosomal protein S9/S16
NIAKO_RS29705	PF00572	Ribosomal protein L13
NIAKO_RS29710	PF12034	Domain of unknown function (DUF3520)
NIAKO_RS29710	PF00092	von Willebrand factor type A domain
NIAKO_RS29710	PF12450	von Willebrand factor 
NIAKO_RS29715	PF00078	Reverse transcriptase (RNA-dependent DNA polymerase)
NIAKO_RS29720	PF00078	Reverse transcriptase (RNA-dependent DNA polymerase)
NIAKO_RS29720	PF01348	Type II intron maturase
NIAKO_RS29755	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS29755	PF00593	TonB dependent receptor
NIAKO_RS29765	PF12826	Helix-hairpin-helix motif
NIAKO_RS29765	PF03119	NAD-dependent DNA ligase C4 zinc finger domain
NIAKO_RS29765	PF03120	NAD-dependent DNA ligase OB-fold domain
NIAKO_RS29765	PF01653	NAD-dependent DNA ligase adenylation domain
NIAKO_RS29765	PF00533	BRCA1 C Terminus (BRCT) domain
NIAKO_RS29780	PF02774	Semialdehyde dehydrogenase, dimerisation domain
NIAKO_RS29780	PF01118	Semialdehyde dehydrogenase, NAD binding domain
NIAKO_RS29795	PF00440	Bacterial regulatory proteins, tetR family
NIAKO_RS29800	PF00111	2Fe-2S iron-sulfur cluster binding domain
NIAKO_RS29800	PF00175	Oxidoreductase NAD-binding domain 
NIAKO_RS29800	PF00970	Oxidoreductase FAD-binding domain
NIAKO_RS29835	PF11855	Protein of unknown function (DUF3375)
NIAKO_RS29850	PF00078	Reverse transcriptase (RNA-dependent DNA polymerase)
NIAKO_RS29865	PF01266	FAD dependent oxidoreductase
NIAKO_RS29865	PF05430	S-adenosyl-L-methionine-dependent methyltransferase
NIAKO_RS29870	PF09190	DALR domain
NIAKO_RS29870	PF01406	tRNA synthetases class I (C) catalytic domain
NIAKO_RS29890	PF05958	tRNA (Uracil-5-)-methyltransferase
NIAKO_RS29890	PF01938	TRAM domain
NIAKO_RS29895	PF01641	SelR domain
NIAKO_RS29905	PF17820	PDZ domain
NIAKO_RS29905	PF13180	PDZ domain
NIAKO_RS29920	PF00171	Aldehyde dehydrogenase family
NIAKO_RS29920	PF01575	MaoC like domain
NIAKO_RS29935	PF03600	Citrate transporter
NIAKO_RS29950	PF00005	ABC transporter
NIAKO_RS29950	PF12399	Branched-chain amino acid ATP-binding cassette transporter
NIAKO_RS29955	PF02219	Methylenetetrahydrofolate reductase
NIAKO_RS29975	PF00155	Aminotransferase class I and II
NIAKO_RS29985	PF03033	Glycosyltransferase family 28 N-terminal domain
NIAKO_RS29985	PF04101	Glycosyltransferase family 28 C-terminal domain
NIAKO_RS29995	PF00072	Response regulator receiver domain
NIAKO_RS29995	PF00196	Bacterial regulatory proteins, luxR family
NIAKO_RS30000	PF00156	Phosphoribosyl transferase domain
NIAKO_RS30005	PF00196	Bacterial regulatory proteins, luxR family
NIAKO_RS30005	PF00072	Response regulator receiver domain
NIAKO_RS30010	PF07730	Histidine kinase
NIAKO_RS30010	PF13185	GAF domain
NIAKO_RS30015	PF00639	PPIC-type PPIASE domain
NIAKO_RS30015	PF09312	SurA N-terminal domain
NIAKO_RS30020	PF00009	Elongation factor Tu GTP binding domain
NIAKO_RS30020	PF11987	Translation-initiation factor 2
NIAKO_RS30020	PF04760	Translation initiation factor IF-2, N-terminal region
NIAKO_RS30025	PF00575	S1 RNA binding domain
NIAKO_RS30025	PF13184	NusA-like KH domain
NIAKO_RS30025	PF08529	NusA N-terminal domain
NIAKO_RS30030	PF02576	RimP N-terminal domain
NIAKO_RS30040	PF13419	Haloacid dehalogenase-like hydrolase
NIAKO_RS30045	PF14310	Fibronectin type III-like domain
NIAKO_RS30045	PF00933	Glycosyl hydrolase family 3 N terminal domain
NIAKO_RS30045	PF01915	Glycosyl hydrolase family 3 C-terminal domain
NIAKO_RS30065	PF00593	TonB dependent receptor
NIAKO_RS30065	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS30090	PF01926	50S ribosome-binding GTPase
NIAKO_RS30090	PF13167	GTP-binding GTPase N-terminal
NIAKO_RS30090	PF16360	GTP-binding GTPase Middle Region
NIAKO_RS30170	PF13356	Arm DNA-binding domain
NIAKO_RS30170	PF00589	Phage integrase family
NIAKO_RS30260	PF00578	AhpC/TSA family
NIAKO_RS30280	PF01042	Endoribonuclease L-PSP
NIAKO_RS30295	PF01494	FAD binding domain
NIAKO_RS30330	PF00156	Phosphoribosyl transferase domain
NIAKO_RS30330	PF05139	Erythromycin esterase
NIAKO_RS30370	PF02055	Glycosyl hydrolase family 30 TIM-barrel domain
NIAKO_RS30370	PF17189	Glycosyl hydrolase family 30 beta sandwich domain
NIAKO_RS30380	PF00593	TonB dependent receptor
NIAKO_RS30380	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS30395	PF14322	Starch-binding associating with outer membrane
NIAKO_RS30395	PF07980	SusD family
NIAKO_RS30400	PF00593	TonB dependent receptor
NIAKO_RS30400	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS30480	PF09308	LuxQ, periplasmic
NIAKO_RS30480	PF00072	Response regulator receiver domain
NIAKO_RS30480	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS30480	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS30485	PF07992	Pyridine nucleotide-disulphide oxidoreductase
NIAKO_RS30495	PF10459	Peptidase S46
NIAKO_RS30505	PF01018	GTP1/OBG
NIAKO_RS30505	PF01926	50S ribosome-binding GTPase
NIAKO_RS30515	PF00132	Bacterial transferase hexapeptide (six repeats)
NIAKO_RS30520	PF00248	Aldo/keto reductase family
NIAKO_RS30525	PF03061	Thioesterase superfamily
NIAKO_RS30530	PF00378	Enoyl-CoA hydratase/isomerase
NIAKO_RS30535	PF01883	Iron-sulfur cluster assembly protein
NIAKO_RS30540	PF05138	Phenylacetic acid catabolic protein
NIAKO_RS30545	PF06243	Phenylacetic acid degradation B
NIAKO_RS30550	PF05138	Phenylacetic acid catabolic protein
NIAKO_RS30560	PF04945	YHS domain
NIAKO_RS30565	PF04945	YHS domain
NIAKO_RS30575	PF00873	AcrB/AcrD/AcrF family
NIAKO_RS30580	PF00873	AcrB/AcrD/AcrF family
NIAKO_RS30595	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS30595	PF00672	HAMP domain
NIAKO_RS30595	PF02743	Cache domain
NIAKO_RS30595	PF06580	Histidine kinase
NIAKO_RS30600	PF00072	Response regulator receiver domain
NIAKO_RS30600	PF04397	LytTr DNA-binding domain
NIAKO_RS30625	PF00005	ABC transporter
NIAKO_RS30630	PF02405	Permease MlaE
NIAKO_RS30635	PF00082	Subtilase family
NIAKO_RS30640	PF00890	FAD binding domain
NIAKO_RS30640	PF04205	FMN-binding domain
NIAKO_RS30640	PF03358	NADPH-dependent FMN reductase
NIAKO_RS30680	PF01594	AI-2E family transporter
NIAKO_RS30695	PF00309	Sigma-54 factor, Activator interacting domain (AID) 
NIAKO_RS30695	PF04963	Sigma-54 factor, core binding domain
NIAKO_RS30695	PF04552	Sigma-54, DNA binding domain
NIAKO_RS30710	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
NIAKO_RS30715	PF02638	Glycosyl hydrolase-like 10
NIAKO_RS30720	PF01047	MarR family
NIAKO_RS30735	PF01183	Glycosyl hydrolases family 25
NIAKO_RS30770	PF00732	GMC oxidoreductase
NIAKO_RS30770	PF05199	GMC oxidoreductase
NIAKO_RS30775	PF05199	GMC oxidoreductase
NIAKO_RS30775	PF00732	GMC oxidoreductase
NIAKO_RS30780	PF01261	Xylose isomerase-like TIM barrel
NIAKO_RS30790	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
NIAKO_RS30790	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
NIAKO_RS30815	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
NIAKO_RS30815	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
NIAKO_RS30865	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS30865	PF06580	Histidine kinase
NIAKO_RS30870	PF04397	LytTr DNA-binding domain
NIAKO_RS30870	PF00072	Response regulator receiver domain
NIAKO_RS30875	PF00580	UvrD/REP helicase N-terminal domain
NIAKO_RS30875	PF13361	UvrD-like helicase C-terminal domain
NIAKO_RS30895	PF05970	PIF1-like helicase
NIAKO_RS30895	PF14493	Helix-turn-helix domain
NIAKO_RS30900	PF01569	PAP2 superfamily
NIAKO_RS30910	PF04228	Putative neutral zinc metallopeptidase
NIAKO_RS30915	PF00072	Response regulator receiver domain
NIAKO_RS30915	PF09308	LuxQ, periplasmic
NIAKO_RS30915	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS30915	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS30930	PF00154	recA bacterial DNA recombination protein
NIAKO_RS30940	PF02142	MGS-like domain
NIAKO_RS30945	PF17757	UvrB interaction domain
NIAKO_RS30945	PF12344	Ultra-violet resistance protein B
NIAKO_RS30945	PF02151	UvrB/uvrC motif
NIAKO_RS30945	PF00271	Helicase conserved C-terminal domain
NIAKO_RS30945	PF04851	Type III restriction enzyme, res subunit
NIAKO_RS30950	PF01367	5'-3' exonuclease, C-terminal SAM fold
NIAKO_RS30950	PF01612	3'-5' exonuclease
NIAKO_RS30950	PF00476	DNA polymerase family A
NIAKO_RS30950	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
NIAKO_RS30955	PF02223	Thymidylate kinase
NIAKO_RS30995	PF06580	Histidine kinase
NIAKO_RS30995	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS30995	PF13492	GAF domain
NIAKO_RS30995	PF07694	5TMR of 5TMR-LYT
NIAKO_RS31000	PF00158	Sigma-54 interaction domain
NIAKO_RS31000	PF02954	Bacterial regulatory protein, Fis family
NIAKO_RS31000	PF00072	Response regulator receiver domain
NIAKO_RS31030	PF02630	SCO1/SenC
NIAKO_RS31040	PF01106	NifU-like domain
NIAKO_RS31050	PF00106	short chain dehydrogenase
NIAKO_RS31070	PF00912	Transglycosylase
NIAKO_RS31105	PF00459	Inositol monophosphatase family
NIAKO_RS31110	PF02769	AIR synthase related protein, C-terminal domain
NIAKO_RS31110	PF00586	AIR synthase related protein, N-terminal domain
NIAKO_RS31120	PF01979	Amidohydrolase family
NIAKO_RS31125	PF00795	Carbon-nitrogen hydrolase
NIAKO_RS31155	PF01145	SPFH domain / Band 7 family
NIAKO_RS31175	PF01467	Cytidylyltransferase-like
NIAKO_RS31185	PF02130	Uncharacterized protein family UPF0054
NIAKO_RS31195	PF01134	Glucose inhibited division protein A
NIAKO_RS31195	PF13932	GidA associated domain
NIAKO_RS31205	PF13185	GAF domain
NIAKO_RS31210	PF02445	Quinolinate synthetase A protein
NIAKO_RS31230	PF01654	Cytochrome bd terminal oxidase subunit I
NIAKO_RS31235	PF02322	Cytochrome bd terminal oxidase subunit II
NIAKO_RS31245	PF01544	CorA-like Mg2+ transporter protein
NIAKO_RS31255	PF00465	Iron-containing alcohol dehydrogenase 
NIAKO_RS31260	PF00251	Glycosyl hydrolases family 32 N-terminal domain
NIAKO_RS31260	PF08244	Glycosyl hydrolases family 32 C terminal
NIAKO_RS31265	PF00578	AhpC/TSA family
NIAKO_RS31270	PF02627	Carboxymuconolactone decarboxylase family
NIAKO_RS31275	PF00480	ROK family
NIAKO_RS31280	PF02348	Cytidylyltransferase
NIAKO_RS31285	PF14403	Circularly permuted ATP-grasp type 2 
NIAKO_RS31295	PF08379	Bacterial transglutaminase-like N-terminal region
NIAKO_RS31295	PF01841	Transglutaminase-like superfamily
NIAKO_RS31305	PF02767	DNA polymerase III beta subunit, central domain
NIAKO_RS31305	PF00712	DNA polymerase III beta subunit, N-terminal domain
NIAKO_RS31305	PF02768	DNA polymerase III beta subunit, C-terminal domain
NIAKO_RS31315	PF13180	PDZ domain
NIAKO_RS31325	PF08446	PAS fold
NIAKO_RS31325	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS31325	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS31325	PF01590	GAF domain
NIAKO_RS31325	PF00360	Phytochrome region
NIAKO_RS31330	PF00072	Response regulator receiver domain
NIAKO_RS31335	PF12805	FUSC-like inner membrane protein yccS
NIAKO_RS31360	PF17092	Penicillin-binding protein OB-like domain
NIAKO_RS31360	PF00912	Transglycosylase
NIAKO_RS31360	PF00905	Penicillin binding protein transpeptidase domain
NIAKO_RS31365	PF00892	EamA-like transporter family
NIAKO_RS31370	PF01037	Lrp/AsnC ligand binding domain
NIAKO_RS31410	PF00710	Asparaginase, N-terminal
NIAKO_RS31410	PF17763	Glutaminase/Asparaginase C-terminal domain
NIAKO_RS31415	PF00486	Transcriptional regulatory protein, C terminal
NIAKO_RS31415	PF00072	Response regulator receiver domain
NIAKO_RS31420	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS31420	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS31420	PF00672	HAMP domain
NIAKO_RS31430	PF01062	Bestrophin, RFP-TM, chloride channel
NIAKO_RS31435	PF14492	Elongation Factor G, domain II
NIAKO_RS31435	PF03764	Elongation factor G, domain IV
NIAKO_RS31435	PF00679	Elongation factor G C-terminus
NIAKO_RS31435	PF03144	Elongation factor Tu domain 2
NIAKO_RS31435	PF00009	Elongation factor Tu GTP binding domain
NIAKO_RS31450	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS31450	PF00593	TonB dependent receptor
NIAKO_RS31455	PF07980	SusD family
NIAKO_RS31460	PF13802	Galactose mutarotase-like
NIAKO_RS31460	PF01055	Glycosyl hydrolases family 31 
NIAKO_RS31525	PF00271	Helicase conserved C-terminal domain
NIAKO_RS31525	PF00570	HRDC domain
NIAKO_RS31525	PF16124	RecQ zinc-binding
NIAKO_RS31525	PF09382	RQC domain
NIAKO_RS31525	PF00270	DEAD/DEAH box helicase
NIAKO_RS31530	PF01380	SIS domain
NIAKO_RS31530	PF00571	CBS domain
NIAKO_RS31535	PF01050	Mannose-6-phosphate isomerase
NIAKO_RS31535	PF00483	Nucleotidyl transferase
NIAKO_RS31545	PF04237	YjbR
NIAKO_RS31550	PF00155	Aminotransferase class I and II
NIAKO_RS31555	PF00583	Acetyltransferase (GNAT) family
NIAKO_RS31560	PF02421	Ferrous iron transport protein B
NIAKO_RS31560	PF07664	Ferrous iron transport protein B C terminus
NIAKO_RS31560	PF07670	Nucleoside recognition
NIAKO_RS31565	PF14508	Glycosyl-hydrolase 97 N-terminal
NIAKO_RS31565	PF10566	Glycoside hydrolase 97  
NIAKO_RS31565	PF14509	Glycosyl-hydrolase 97 C-terminal, oligomerisation
NIAKO_RS31570	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
NIAKO_RS31570	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
NIAKO_RS31575	PF00152	tRNA synthetases class II (D, K and N) 
NIAKO_RS31575	PF01336	OB-fold nucleic acid binding domain
NIAKO_RS31625	PF01571	Aminomethyltransferase folate-binding domain
NIAKO_RS31625	PF08669	Glycine cleavage T-protein C-terminal barrel domain
NIAKO_RS31635	PF04029	2-phosphosulpholactate phosphatase
NIAKO_RS31645	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
NIAKO_RS31645	PF07498	Rho termination factor, N-terminal domain
NIAKO_RS31645	PF07497	Rho termination factor, RNA-binding domain
NIAKO_RS31650	PF01329	Pterin 4 alpha carbinolamine dehydratase
NIAKO_RS31665	PF00176	SNF2 family N-terminal domain
NIAKO_RS31665	PF00271	Helicase conserved C-terminal domain
NIAKO_RS31665	PF12419	SNF2 Helicase protein 
NIAKO_RS31685	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
NIAKO_RS31685	PF02806	Alpha amylase, C-terminal all-beta domain
NIAKO_RS31685	PF00128	Alpha amylase, catalytic domain
NIAKO_RS31705	PF00072	Response regulator receiver domain
NIAKO_RS31705	PF00486	Transcriptional regulatory protein, C terminal
NIAKO_RS31720	PF04055	Radical SAM superfamily
NIAKO_RS31730	PF00675	Insulinase (Peptidase family M16)
NIAKO_RS31730	PF05193	Peptidase M16 inactive domain
NIAKO_RS31735	PF05193	Peptidase M16 inactive domain
NIAKO_RS31735	PF00675	Insulinase (Peptidase family M16)
NIAKO_RS31740	PF04020	Mycobacterial 4 TMS phage holin, superfamily IV
NIAKO_RS31745	PF02779	Transketolase, pyrimidine binding domain
NIAKO_RS31745	PF02780	Transketolase, C-terminal domain
NIAKO_RS31755	PF00595	PDZ domain
NIAKO_RS31755	PF17804	Tail specific protease N-terminal domain
NIAKO_RS31755	PF11818	C-terminal domain of tail specific protease (DUF3340)
NIAKO_RS31755	PF03572	Peptidase family S41
NIAKO_RS31765	PF01804	Penicillin amidase
NIAKO_RS31770	PF07969	Amidohydrolase family
NIAKO_RS31780	PF05532	CsbD-like
NIAKO_RS31795	PF00144	Beta-lactamase
NIAKO_RS31800	PF00144	Beta-lactamase
NIAKO_RS31820	PF00551	Formyl transferase
NIAKO_RS31830	PF00037	4Fe-4S binding domain
NIAKO_RS31830	PF13247	4Fe-4S dicluster domain
NIAKO_RS31860	PF00115	Cytochrome C and Quinol oxidase polypeptide I
NIAKO_RS31865	PF01040	UbiA prenyltransferase family
NIAKO_RS31870	PF00510	Cytochrome c oxidase subunit III
NIAKO_RS31875	PF00510	Cytochrome c oxidase subunit III
NIAKO_RS31890	PF04238	Protein of unknown function (DUF420)
NIAKO_RS31900	PF08240	Alcohol dehydrogenase GroES-like domain
NIAKO_RS31900	PF00107	Zinc-binding dehydrogenase
NIAKO_RS31905	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
NIAKO_RS31905	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
NIAKO_RS31915	PF02390	Putative methyltransferase 
NIAKO_RS31930	PF13404	AsnC-type helix-turn-helix domain
NIAKO_RS31930	PF01037	Lrp/AsnC ligand binding domain
NIAKO_RS31940	PF00528	Binding-protein-dependent transport system inner membrane component
NIAKO_RS31940	PF12911	N-terminal TM domain of oligopeptide transport permease C
NIAKO_RS31950	PF12697	Alpha/beta hydrolase family
NIAKO_RS31960	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
NIAKO_RS31960	PF02770	Acyl-CoA dehydrogenase, middle domain
NIAKO_RS31960	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
NIAKO_RS31970	PF13286	Phosphohydrolase-associated domain
NIAKO_RS31970	PF01966	HD domain
NIAKO_RS31980	PF10008	Uncharacterized protein conserved in bacteria (DUF2251)
NIAKO_RS31990	PF00535	Glycosyl transferase family 2
NIAKO_RS31995	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
NIAKO_RS32000	PF00479	Glucose-6-phosphate dehydrogenase, NAD binding domain
NIAKO_RS32000	PF02781	Glucose-6-phosphate dehydrogenase, C-terminal domain
NIAKO_RS32005	PF00393	6-phosphogluconate dehydrogenase, C-terminal domain
NIAKO_RS32005	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
NIAKO_RS32015	PF00076	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
NIAKO_RS32025	PF07690	Major Facilitator Superfamily
NIAKO_RS32035	PF01476	LysM domain
NIAKO_RS32035	PF08525	Opacity-associated protein A N-terminal motif
NIAKO_RS32035	PF01551	Peptidase family M23
NIAKO_RS32045	PF04052	TolB amino-terminal domain
NIAKO_RS32045	PF07676	WD40-like Beta Propeller Repeat
NIAKO_RS32050	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
NIAKO_RS32060	PF01300	Telomere recombination
NIAKO_RS32070	PF01351	Ribonuclease HII
NIAKO_RS32085	PF00581	Rhodanese-like domain
NIAKO_RS32085	PF00753	Metallo-beta-lactamase superfamily
NIAKO_RS32105	PF13442	Cytochrome C oxidase, cbb3-type, subunit III 
NIAKO_RS32115	PF02628	Cytochrome oxidase assembly protein
NIAKO_RS32125	PF00781	Diacylglycerol kinase catalytic domain
NIAKO_RS32145	PF01625	Peptide methionine sulfoxide reductase
NIAKO_RS32170	PF03144	Elongation factor Tu domain 2
NIAKO_RS32170	PF00009	Elongation factor Tu GTP binding domain
NIAKO_RS32170	PF14492	Elongation Factor G, domain II
NIAKO_RS32170	PF00679	Elongation factor G C-terminus
NIAKO_RS32190	PF00535	Glycosyl transferase family 2
NIAKO_RS32220	PF03309	Type III pantothenate kinase
NIAKO_RS32230	PF00248	Aldo/keto reductase family
NIAKO_RS32245	PF00440	Bacterial regulatory proteins, tetR family
NIAKO_RS32255	PF13533	Biotin-lipoyl like
NIAKO_RS32260	PF07690	Major Facilitator Superfamily
NIAKO_RS32265	PF00106	short chain dehydrogenase
NIAKO_RS32270	PF00152	tRNA synthetases class II (D, K and N) 
NIAKO_RS32270	PF01336	OB-fold nucleic acid binding domain
NIAKO_RS32275	PF01613	Flavin reductase like domain
NIAKO_RS32290	PF02927	Cellulase N-terminal ig-like domain
NIAKO_RS32290	PF07679	Immunoglobulin I-set domain
NIAKO_RS32290	PF00759	Glycosyl hydrolase family 9
NIAKO_RS32290	PF02018	Carbohydrate binding domain
NIAKO_RS32325	PF01053	Cys/Met metabolism PLP-dependent enzyme
NIAKO_RS32335	PF00733	Asparagine synthase
NIAKO_RS32335	PF13537	Glutamine amidotransferase domain
NIAKO_RS32365	PF00884	Sulfatase
NIAKO_RS32370	PF02502	Ribose/Galactose Isomerase
NIAKO_RS32375	PF00902	Sec-independent protein translocase protein (TatC)
NIAKO_RS32380	PF00571	CBS domain
NIAKO_RS32380	PF03471	Transporter associated domain
NIAKO_RS32385	PF00625	Guanylate kinase
NIAKO_RS32390	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
NIAKO_RS32405	PF09424	Yqey-like protein
NIAKO_RS32415	PF00561	alpha/beta hydrolase fold
NIAKO_RS32430	PF01513	ATP-NAD kinase
NIAKO_RS32440	PF01255	Putative undecaprenyl diphosphate synthase
NIAKO_RS32445	PF07244	Surface antigen variable number repeat
NIAKO_RS32445	PF01103	Surface antigen
NIAKO_RS32460	PF01177	Asp/Glu/Hydantoin racemase
NIAKO_RS32465	PF00468	Ribosomal protein L34
NIAKO_RS32470	PF00825	Ribonuclease P
NIAKO_RS32475	PF01809	Putative membrane protein insertion efficiency factor
NIAKO_RS32485	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
NIAKO_RS32485	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
NIAKO_RS32505	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS32505	PF00593	TonB dependent receptor
NIAKO_RS32515	PF14437	MafB19-like deaminase
NIAKO_RS32520	PF02447	GntP family permease
NIAKO_RS32530	PF00171	Aldehyde dehydrogenase family
NIAKO_RS32535	PF00255	Glutathione peroxidase
NIAKO_RS32555	PF01207	Dihydrouridine synthase (Dus)
NIAKO_RS32575	PF02666	Phosphatidylserine decarboxylase
NIAKO_RS32595	PF00072	Response regulator receiver domain
NIAKO_RS32595	PF00486	Transcriptional regulatory protein, C terminal
NIAKO_RS32600	PF13493	Domain of unknown function (DUF4118)
NIAKO_RS32600	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS32600	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS32600	PF02702	Osmosensitive K+ channel His kinase sensor domain
NIAKO_RS32615	PF00849	RNA pseudouridylate synthase
NIAKO_RS32620	PF00132	Bacterial transferase hexapeptide (six repeats)
NIAKO_RS32620	PF04613	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD  
NIAKO_RS32625	PF04397	LytTr DNA-binding domain
NIAKO_RS32625	PF00072	Response regulator receiver domain
NIAKO_RS32630	PF07694	5TMR of 5TMR-LYT
NIAKO_RS32630	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS32630	PF06580	Histidine kinase
NIAKO_RS32640	PF01370	NAD dependent epimerase/dehydratase family
NIAKO_RS32645	PF18321	3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain
NIAKO_RS32645	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
NIAKO_RS32645	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
NIAKO_RS32650	PF01409	tRNA synthetases class II core domain (F)
NIAKO_RS32650	PF02912	Aminoacyl tRNA synthetase class II, N-terminal domain
NIAKO_RS32660	PF02113	D-Ala-D-Ala carboxypeptidase 3 (S13) family
NIAKO_RS32675	PF08676	MutL C terminal dimerisation domain
NIAKO_RS32675	PF01119	DNA mismatch repair protein, C-terminal domain
NIAKO_RS32680	PF01915	Glycosyl hydrolase family 3 C-terminal domain
NIAKO_RS32680	PF00933	Glycosyl hydrolase family 3 N terminal domain
NIAKO_RS32690	PF01855	Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
NIAKO_RS32690	PF01558	Pyruvate ferredoxin/flavodoxin oxidoreductase
NIAKO_RS32690	PF17147	Pyruvate:ferredoxin oxidoreductase core domain II
NIAKO_RS32720	PF10576	Iron-sulfur binding domain of endonuclease III
NIAKO_RS32720	PF00730	HhH-GPD superfamily base excision DNA repair protein
NIAKO_RS32720	PF00633	Helix-hairpin-helix motif
NIAKO_RS32735	PF00113	Enolase, C-terminal TIM barrel domain
NIAKO_RS32735	PF03952	Enolase, N-terminal domain
NIAKO_RS32745	PF00005	ABC transporter
NIAKO_RS32750	PF00484	Carbonic anhydrase
NIAKO_RS32755	PF01740	STAS domain
NIAKO_RS32755	PF00916	Sulfate permease family
NIAKO_RS32770	PF00083	Sugar (and other) transporter
NIAKO_RS32775	PF16177	Acetyl-coenzyme A synthetase N-terminus
NIAKO_RS32775	PF13193	AMP-binding enzyme C-terminal domain
NIAKO_RS32775	PF00501	AMP-binding enzyme
NIAKO_RS32800	PF04542	Sigma-70 region 2 
NIAKO_RS32800	PF08281	Sigma-70, region 4
NIAKO_RS32810	PF00155	Aminotransferase class I and II
NIAKO_RS32825	PF01042	Endoribonuclease L-PSP
NIAKO_RS32835	PF00814	Glycoprotease family
NIAKO_RS32840	PF01022	Bacterial regulatory protein, arsR family
NIAKO_RS32845	PF00581	Rhodanese-like domain
NIAKO_RS32845	PF00753	Metallo-beta-lactamase superfamily
NIAKO_RS32850	PF00196	Bacterial regulatory proteins, luxR family
NIAKO_RS32850	PF00072	Response regulator receiver domain
NIAKO_RS32860	PF03668	P-loop ATPase protein family
NIAKO_RS32875	PF00890	FAD binding domain
NIAKO_RS32875	PF02910	Fumarate reductase flavoprotein C-term
NIAKO_RS32890	PF10509	Galactokinase galactose-binding signature
NIAKO_RS32890	PF08544	GHMP kinases C terminal 
NIAKO_RS32890	PF00288	GHMP kinases N terminal domain
NIAKO_RS32900	PF05163	DinB family
NIAKO_RS32905	PF08279	HTH domain
NIAKO_RS32905	PF13280	WYL domain
NIAKO_RS32910	PF04551	GcpE protein
NIAKO_RS32920	PF13519	von Willebrand factor type A domain
NIAKO_RS32925	PF00905	Penicillin binding protein transpeptidase domain
NIAKO_RS32930	PF01204	Trehalase
NIAKO_RS32965	PF07690	Major Facilitator Superfamily
NIAKO_RS32975	PF04909	Amidohydrolase
NIAKO_RS32980	PF05336	L-rhamnose mutarotase
NIAKO_RS32985	PF01557	Fumarylacetoacetate (FAA) hydrolase family
NIAKO_RS32990	PF02310	B12 binding domain
NIAKO_RS32990	PF01642	Methylmalonyl-CoA mutase
NIAKO_RS32995	PF01642	Methylmalonyl-CoA mutase
NIAKO_RS32995	PF02310	B12 binding domain
NIAKO_RS33005	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
NIAKO_RS33010	PF00005	ABC transporter
NIAKO_RS33015	PF02687	FtsX-like permease family
NIAKO_RS33015	PF00005	ABC transporter
NIAKO_RS33015	PF12704	MacB-like periplasmic core domain
NIAKO_RS33020	PF01149	Formamidopyrimidine-DNA glycosylase N-terminal domain
NIAKO_RS33020	PF06831	Formamidopyrimidine-DNA glycosylase H2TH domain
NIAKO_RS33020	PF06827	Zinc finger found in FPG and IleRS
NIAKO_RS33030	PF00270	DEAD/DEAH box helicase
NIAKO_RS33030	PF00271	Helicase conserved C-terminal domain
NIAKO_RS33065	PF04542	Sigma-70 region 2 
NIAKO_RS33065	PF08281	Sigma-70, region 4
NIAKO_RS33075	PF11798	IMS family HHH motif
NIAKO_RS33075	PF13438	Domain of unknown function (DUF4113)
NIAKO_RS33075	PF11799	impB/mucB/samB family C-terminal domain
NIAKO_RS33075	PF00817	impB/mucB/samB family
NIAKO_RS33080	PF00717	Peptidase S24-like
NIAKO_RS33115	PF05384	Sensor protein DegS
NIAKO_RS33115	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS33115	PF07730	Histidine kinase
NIAKO_RS33120	PF00196	Bacterial regulatory proteins, luxR family
NIAKO_RS33120	PF00072	Response regulator receiver domain
NIAKO_RS33180	PF01139	tRNA-splicing ligase RtcB
NIAKO_RS33210	PF02706	Chain length determinant protein
NIAKO_RS33210	PF13614	AAA domain
NIAKO_RS33210	PF13807	G-rich domain on putative tyrosine kinase
NIAKO_RS33215	PF00132	Bacterial transferase hexapeptide (six repeats)
NIAKO_RS33220	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
NIAKO_RS33220	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
NIAKO_RS33225	PF01061	ABC-2 type transporter
NIAKO_RS33230	PF14524	Wzt C-terminal domain
NIAKO_RS33230	PF00005	ABC transporter
NIAKO_RS33235	PF00132	Bacterial transferase hexapeptide (six repeats)
NIAKO_RS33250	PF05523	WxcM-like, C-terminal 
NIAKO_RS33260	PF01370	NAD dependent epimerase/dehydratase family
NIAKO_RS33270	PF14602	Hexapeptide repeat of succinyl-transferase
NIAKO_RS33270	PF12464	Maltose acetyltransferase 
NIAKO_RS33270	PF00132	Bacterial transferase hexapeptide (six repeats)
NIAKO_RS33275	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
NIAKO_RS33290	PF02719	Polysaccharide biosynthesis protein
NIAKO_RS33305	PF13439	Glycosyltransferase Family 4
NIAKO_RS33305	PF00534	Glycosyl transferases group 1
NIAKO_RS33325	PF02350	UDP-N-acetylglucosamine 2-epimerase
NIAKO_RS33345	PF01370	NAD dependent epimerase/dehydratase family
NIAKO_RS33350	PF00248	Aldo/keto reductase family
NIAKO_RS33355	PF00732	GMC oxidoreductase
NIAKO_RS33355	PF05199	GMC oxidoreductase
NIAKO_RS33360	PF00534	Glycosyl transferases group 1
NIAKO_RS33360	PF13439	Glycosyltransferase Family 4
NIAKO_RS33370	PF16363	GDP-mannose 4,6 dehydratase
NIAKO_RS33385	PF16861	Carbamoyltransferase C-terminus
NIAKO_RS33385	PF02543	Carbamoyltransferase N-terminus
NIAKO_RS33390	PF00535	Glycosyl transferase family 2
NIAKO_RS33395	PF16363	GDP-mannose 4,6 dehydratase
NIAKO_RS33400	PF01370	NAD dependent epimerase/dehydratase family
NIAKO_RS33415	PF08281	Sigma-70, region 4
NIAKO_RS33415	PF04542	Sigma-70 region 2 
NIAKO_RS33420	PF00293	NUDIX domain
NIAKO_RS33455	PF13183	4Fe-4S dicluster domain
NIAKO_RS33455	PF01565	FAD binding domain 
NIAKO_RS33455	PF02913	FAD linked oxidases, C-terminal domain
NIAKO_RS33460	PF01757	Acyltransferase family
NIAKO_RS33465	PF01757	Acyltransferase family
NIAKO_RS33470	PF06580	Histidine kinase
NIAKO_RS33470	PF13492	GAF domain
NIAKO_RS33470	PF07694	5TMR of 5TMR-LYT
NIAKO_RS33470	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS33475	PF00072	Response regulator receiver domain
NIAKO_RS33475	PF04397	LytTr DNA-binding domain
NIAKO_RS33485	PF00593	TonB dependent receptor
NIAKO_RS33490	PF07690	Major Facilitator Superfamily
NIAKO_RS33495	PF01037	Lrp/AsnC ligand binding domain
NIAKO_RS33505	PF00106	short chain dehydrogenase
NIAKO_RS33545	PF14310	Fibronectin type III-like domain
NIAKO_RS33545	PF01915	Glycosyl hydrolase family 3 C-terminal domain
NIAKO_RS33545	PF07691	PA14 domain
NIAKO_RS33545	PF00933	Glycosyl hydrolase family 3 N terminal domain
NIAKO_RS33560	PF04264	YceI-like domain
NIAKO_RS33565	PF01361	Tautomerase enzyme
NIAKO_RS33580	PF03060	Nitronate monooxygenase
NIAKO_RS33585	PF00106	short chain dehydrogenase
NIAKO_RS33655	PF02654	Cobalamin-5-phosphate synthase
NIAKO_RS33660	PF02277	Phosphoribosyltransferase
NIAKO_RS33670	PF02283	Cobinamide kinase / cobinamide phosphate guanyltransferase
NIAKO_RS33690	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS33690	PF00593	TonB dependent receptor
NIAKO_RS33695	PF13520	Amino acid permease
NIAKO_RS33700	PF01053	Cys/Met metabolism PLP-dependent enzyme
NIAKO_RS33715	PF01210	NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
NIAKO_RS33715	PF07479	NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
NIAKO_RS33720	PF04055	Radical SAM superfamily
NIAKO_RS33740	PF03190	Protein of unknown function, DUF255
NIAKO_RS33745	PF03781	Sulfatase-modifying factor enzyme 1
NIAKO_RS33765	PF08459	UvrC Helix-hairpin-helix N-terminal
NIAKO_RS33765	PF01541	GIY-YIG catalytic domain
NIAKO_RS33785	PF00115	Cytochrome C and Quinol oxidase polypeptide I
NIAKO_RS33790	PF01676	Metalloenzyme superfamily
NIAKO_RS33790	PF06415	BPG-independent PGAM N-terminus (iPGM_N)
NIAKO_RS33800	PF01729	Quinolinate phosphoribosyl transferase, C-terminal domain
NIAKO_RS33800	PF02749	Quinolinate phosphoribosyl transferase, N-terminal domain
NIAKO_RS33805	PF01253	Translation initiation factor SUI1
NIAKO_RS33815	PF18324	Hypothetical protein TT1725
NIAKO_RS33815	PF00180	Isocitrate/isopropylmalate dehydrogenase
NIAKO_RS33820	PF04379	ApaG domain 
NIAKO_RS33825	PF00854	POT family
NIAKO_RS33830	PF02844	Phosphoribosylglycinamide synthetase, N domain
NIAKO_RS33830	PF02843	Phosphoribosylglycinamide synthetase, C domain
NIAKO_RS33830	PF01071	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
NIAKO_RS33835	PF03301	Tryptophan 2,3-dioxygenase
NIAKO_RS33855	PF03717	Penicillin-binding Protein dimerisation domain
NIAKO_RS33855	PF00905	Penicillin binding protein transpeptidase domain
NIAKO_RS33860	PF01098	Cell cycle protein
NIAKO_RS33880	PF04539	Sigma-70 region 3
NIAKO_RS33880	PF04545	Sigma-70, region 4
NIAKO_RS33880	PF04542	Sigma-70 region 2 
NIAKO_RS33895	PF02779	Transketolase, pyrimidine binding domain
NIAKO_RS33895	PF02780	Transketolase, C-terminal domain
NIAKO_RS33900	PF16363	GDP-mannose 4,6 dehydratase
NIAKO_RS33905	PF00483	Nucleotidyl transferase
NIAKO_RS33910	PF01384	Phosphate transporter family
NIAKO_RS33960	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS33960	PF16736	Single Cache-like 
NIAKO_RS33960	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS33960	PF00989	PAS fold
NIAKO_RS33965	PF00486	Transcriptional regulatory protein, C terminal
NIAKO_RS33965	PF00072	Response regulator receiver domain
NIAKO_RS33980	PF00005	ABC transporter
NIAKO_RS33980	PF00664	ABC transporter transmembrane region
NIAKO_RS33985	PF00119	ATP synthase A chain
NIAKO_RS33990	PF00137	ATP synthase subunit C
NIAKO_RS33995	PF00430	ATP synthase B/B' CF(0)
NIAKO_RS34000	PF00213	ATP synthase delta (OSCP) subunit
NIAKO_RS34005	PF02874	ATP synthase alpha/beta family, beta-barrel domain
NIAKO_RS34005	PF00306	ATP synthase alpha/beta chain, C terminal domain
NIAKO_RS34005	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
NIAKO_RS34060	PF00005	ABC transporter
NIAKO_RS34075	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
NIAKO_RS34075	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
NIAKO_RS34080	PF03781	Sulfatase-modifying factor enzyme 1
NIAKO_RS34085	PF01261	Xylose isomerase-like TIM barrel
NIAKO_RS34095	PF04166	Pyridoxal phosphate biosynthetic protein PdxA
NIAKO_RS34105	PF00398	Ribosomal RNA adenine dimethylase
NIAKO_RS34110	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
NIAKO_RS34110	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
NIAKO_RS34115	PF01272	Transcription elongation factor, GreA/GreB, C-term
NIAKO_RS34115	PF03449	Transcription elongation factor, N-terminal
NIAKO_RS34120	PF01230	HIT domain
NIAKO_RS34125	PF02075	Crossover junction endodeoxyribonuclease RuvC
NIAKO_RS34140	PF00753	Metallo-beta-lactamase superfamily
NIAKO_RS34145	PF11700	Vacuole effluxer Atg22 like
NIAKO_RS34150	PF02673	Bacitracin resistance protein BacA
NIAKO_RS34160	PF18075	FtsX extracellular domain
NIAKO_RS34165	PF13603	Leucyl-tRNA synthetase, Domain 2
NIAKO_RS34165	PF08264	Anticodon-binding domain of tRNA
NIAKO_RS34165	PF00133	tRNA synthetases class I (I, L, M and V)
NIAKO_RS34200	PF05496	Holliday junction DNA helicase RuvB P-loop domain
NIAKO_RS34200	PF05491	RuvB C-terminal winged helix domain
NIAKO_RS34200	PF17864	RuvB AAA lid domain
NIAKO_RS34205	PF00072	Response regulator receiver domain
NIAKO_RS34205	PF00486	Transcriptional regulatory protein, C terminal
NIAKO_RS34210	PF00166	Chaperonin 10 Kd subunit
NIAKO_RS34215	PF05872	Bacterial protein of unknown function (DUF853)
NIAKO_RS34225	PF16124	RecQ zinc-binding
NIAKO_RS34225	PF00271	Helicase conserved C-terminal domain
NIAKO_RS34225	PF00570	HRDC domain
NIAKO_RS34225	PF09382	RQC domain
NIAKO_RS34225	PF00270	DEAD/DEAH box helicase
NIAKO_RS34230	PF00403	Heavy-metal-associated domain
NIAKO_RS34240	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
NIAKO_RS34240	PF05222	Alanine dehydrogenase/PNT, N-terminal domain
NIAKO_RS34255	PF00005	ABC transporter
NIAKO_RS34260	PF00132	Bacterial transferase hexapeptide (six repeats)
NIAKO_RS34260	PF13720	Udp N-acetylglucosamine O-acyltransferase; Domain 2
NIAKO_RS34265	PF07977	FabA-like domain
NIAKO_RS34265	PF03331	UDP-3-O-acyl N-acetylglycosamine deacetylase
NIAKO_RS34270	PF04613	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD  
NIAKO_RS34270	PF00132	Bacterial transferase hexapeptide (six repeats)
NIAKO_RS34275	PF01966	HD domain
NIAKO_RS34280	PF00072	Response regulator receiver domain
NIAKO_RS34280	PF02954	Bacterial regulatory protein, Fis family
NIAKO_RS34280	PF00158	Sigma-54 interaction domain
NIAKO_RS34290	PF12706	Beta-lactamase superfamily domain
NIAKO_RS34295	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS34295	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS34295	PF18415	Histidine kinase receptor ArcB trans-membrane domain
NIAKO_RS34295	PF01627	Hpt domain
NIAKO_RS34295	PF00989	PAS fold
NIAKO_RS34295	PF00072	Response regulator receiver domain
NIAKO_RS34310	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
NIAKO_RS34310	PF02770	Acyl-CoA dehydrogenase, middle domain
NIAKO_RS34310	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
NIAKO_RS34320	PF06689	ClpX C4-type zinc finger
NIAKO_RS34320	PF10431	C-terminal, D2-small domain, of ClpB protein 
NIAKO_RS34320	PF07724	AAA domain (Cdc48 subfamily)
NIAKO_RS34325	PF00574	Clp protease
NIAKO_RS34330	PF00574	Clp protease
NIAKO_RS34335	PF01507	Phosphoadenosine phosphosulfate reductase family
NIAKO_RS34340	PF01507	Phosphoadenosine phosphosulfate reductase family
NIAKO_RS34345	PF00009	Elongation factor Tu GTP binding domain
NIAKO_RS34350	PF00132	Bacterial transferase hexapeptide (six repeats)
NIAKO_RS34355	PF00291	Pyridoxal-phosphate dependent enzyme
NIAKO_RS34360	PF10414	Sirohaem synthase dimerisation region
NIAKO_RS34360	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
NIAKO_RS34360	PF14824	Sirohaem biosynthesis protein central
NIAKO_RS34365	PF00175	Oxidoreductase NAD-binding domain 
NIAKO_RS34365	PF00258	Flavodoxin
NIAKO_RS34365	PF00667	FAD binding domain
NIAKO_RS34370	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
NIAKO_RS34370	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
NIAKO_RS34375	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
NIAKO_RS34375	PF14824	Sirohaem biosynthesis protein central
NIAKO_RS34375	PF10414	Sirohaem synthase dimerisation region
NIAKO_RS34400	PF00561	alpha/beta hydrolase fold
NIAKO_RS34405	PF02566	OsmC-like protein
NIAKO_RS34410	PF01053	Cys/Met metabolism PLP-dependent enzyme
NIAKO_RS34420	PF02875	Mur ligase family, glutamate ligase domain
NIAKO_RS34420	PF01225	Mur ligase family, catalytic domain
NIAKO_RS34420	PF08245	Mur ligase middle domain
NIAKO_RS34425	PF03781	Sulfatase-modifying factor enzyme 1
NIAKO_RS34440	PF02542	YgbB family
NIAKO_RS34445	PF00692	dUTPase
NIAKO_RS34465	PF00534	Glycosyl transferases group 1
NIAKO_RS34465	PF13439	Glycosyltransferase Family 4
NIAKO_RS34480	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
NIAKO_RS34490	PF02245	Methylpurine-DNA glycosylase (MPG)
NIAKO_RS34505	PF03702	Anhydro-N-acetylmuramic acid kinase
NIAKO_RS34510	PF04389	Peptidase family M28
NIAKO_RS34525	PF00072	Response regulator receiver domain
NIAKO_RS34525	PF04397	LytTr DNA-binding domain
NIAKO_RS34530	PF07694	5TMR of 5TMR-LYT
NIAKO_RS34530	PF06580	Histidine kinase
NIAKO_RS34555	PF01593	Flavin containing amine oxidoreductase
NIAKO_RS34565	PF04116	Fatty acid hydroxylase superfamily
NIAKO_RS34575	PF13382	Adenine deaminase C-terminal domain
NIAKO_RS34575	PF01979	Amidohydrolase family
NIAKO_RS34585	PF13802	Galactose mutarotase-like
NIAKO_RS34585	PF01055	Glycosyl hydrolases family 31 
NIAKO_RS34585	PF17137	Domain of unknown function (DUF5110)
NIAKO_RS34585	PF16338	Domain of unknown function (DUF4968)
NIAKO_RS34590	PF01746	tRNA (Guanine-1)-methyltransferase
NIAKO_RS34595	PF01479	S4 domain
NIAKO_RS34600	PF01546	Peptidase family M20/M25/M40
NIAKO_RS34600	PF07687	Peptidase dimerisation domain
NIAKO_RS34605	PF16916	Dimerisation domain of Zinc Transporter
NIAKO_RS34605	PF01545	Cation efflux family
NIAKO_RS34625	PF04545	Sigma-70, region 4
NIAKO_RS34625	PF04539	Sigma-70 region 3
NIAKO_RS34625	PF04542	Sigma-70 region 2 
NIAKO_RS34625	PF00140	Sigma-70 factor, region 1.2
NIAKO_RS34625	PF03979	Sigma-70 factor, region 1.1
NIAKO_RS34630	PF02881	SRP54-type protein, helical bundle domain
NIAKO_RS34630	PF00448	SRP54-type protein, GTPase domain
NIAKO_RS34630	PF02978	Signal peptide binding domain
NIAKO_RS34635	PF00886	Ribosomal protein S16
NIAKO_RS34640	PF01782	RimM N-terminal domain
NIAKO_RS34655	PF11798	IMS family HHH motif
NIAKO_RS34655	PF11799	impB/mucB/samB family C-terminal domain
NIAKO_RS34655	PF00817	impB/mucB/samB family
NIAKO_RS34660	PF10417	C-terminal domain of 1-Cys peroxiredoxin
NIAKO_RS34660	PF00578	AhpC/TSA family
NIAKO_RS34670	PF01979	Amidohydrolase family
NIAKO_RS34675	PF00849	RNA pseudouridylate synthase
NIAKO_RS34680	PF01479	S4 domain
NIAKO_RS34680	PF00849	RNA pseudouridylate synthase
NIAKO_RS34690	PF04055	Radical SAM superfamily
NIAKO_RS34705	PF00108	Thiolase, N-terminal domain
NIAKO_RS34705	PF02803	Thiolase, C-terminal domain
NIAKO_RS34725	PF12704	MacB-like periplasmic core domain
NIAKO_RS34725	PF02687	FtsX-like permease family
NIAKO_RS34725	PF00005	ABC transporter
NIAKO_RS34735	PF03129	Anticodon binding domain
NIAKO_RS34735	PF13393	Histidyl-tRNA synthetase
NIAKO_RS34740	PF01451	Low molecular weight phosphotyrosine protein phosphatase
NIAKO_RS34760	PF00507	NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
NIAKO_RS34765	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
NIAKO_RS34770	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
NIAKO_RS34775	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
NIAKO_RS34785	PF10531	SLBB domain
NIAKO_RS34785	PF10589	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
NIAKO_RS34785	PF01512	Respiratory-chain NADH dehydrogenase 51 Kd subunit
NIAKO_RS34790	PF10588	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
NIAKO_RS34790	PF00384	Molybdopterin oxidoreductase
NIAKO_RS34790	PF09326	NADH-ubiquinone oxidoreductase subunit G, C-terminal
NIAKO_RS34795	PF00146	NADH dehydrogenase
NIAKO_RS34800	PF12838	4Fe-4S dicluster domain
NIAKO_RS34805	PF00499	NADH-ubiquinone/plastoquinone oxidoreductase chain 6
NIAKO_RS34810	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
NIAKO_RS34815	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
NIAKO_RS34815	PF00361	Proton-conducting membrane transporter
NIAKO_RS34820	PF01059	NADH-ubiquinone oxidoreductase chain 4, amino terminus
NIAKO_RS34820	PF00361	Proton-conducting membrane transporter
NIAKO_RS34825	PF00361	Proton-conducting membrane transporter
NIAKO_RS34830	PF12704	MacB-like periplasmic core domain
NIAKO_RS34830	PF02687	FtsX-like permease family
NIAKO_RS34830	PF00005	ABC transporter
NIAKO_RS34870	PF10396	GTP-binding protein TrmE N-terminus
NIAKO_RS34870	PF01926	50S ribosome-binding GTPase
NIAKO_RS34870	PF12631	MnmE helical domain
NIAKO_RS34875	PF17167	Glycosyl hydrolase 36 superfamily, catalytic domain
NIAKO_RS34875	PF06165	Glycosyltransferase family 36
NIAKO_RS34875	PF10091	Putative glucoamylase
NIAKO_RS34880	PF00072	Response regulator receiver domain
NIAKO_RS34880	PF07494	Two component regulator propeller
NIAKO_RS34880	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS34880	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS34880	PF12833	Helix-turn-helix domain
NIAKO_RS34880	PF07495	Y_Y_Y domain
NIAKO_RS34900	PF16925	Tetracyclin repressor-like, C-terminal domain
NIAKO_RS34900	PF00440	Bacterial regulatory proteins, tetR family
NIAKO_RS34930	PF01370	NAD dependent epimerase/dehydratase family
NIAKO_RS34935	PF02397	Bacterial sugar transferase
NIAKO_RS34940	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
NIAKO_RS34940	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
NIAKO_RS34940	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
NIAKO_RS34955	PF13439	Glycosyltransferase Family 4
NIAKO_RS34955	PF00534	Glycosyl transferases group 1
NIAKO_RS34985	PF01370	NAD dependent epimerase/dehydratase family
NIAKO_RS35000	PF00467	KOW motif
NIAKO_RS35000	PF02357	Transcription termination factor nusG
NIAKO_RS35015	PF01544	CorA-like Mg2+ transporter protein
NIAKO_RS35020	PF00005	ABC transporter
NIAKO_RS35020	PF00664	ABC transporter transmembrane region
NIAKO_RS35050	PF00593	TonB dependent receptor
NIAKO_RS35080	PF03009	Glycerophosphoryl diester phosphodiesterase family
NIAKO_RS35090	PF00593	TonB dependent receptor
NIAKO_RS35090	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS35110	PF00375	Sodium:dicarboxylate symporter family
NIAKO_RS35130	PF00571	CBS domain
NIAKO_RS35130	PF01595	Cyclin M transmembrane N-terminal domain
NIAKO_RS35130	PF03471	Transporter associated domain
NIAKO_RS35135	PF04542	Sigma-70 region 2 
NIAKO_RS35135	PF08281	Sigma-70, region 4
NIAKO_RS35165	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS35165	PF00593	TonB dependent receptor
NIAKO_RS35170	PF07980	SusD family
NIAKO_RS35170	PF14322	Starch-binding associating with outer membrane
NIAKO_RS35195	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
NIAKO_RS35200	PF00873	AcrB/AcrD/AcrF family
NIAKO_RS35215	PF00924	Mechanosensitive ion channel
NIAKO_RS35250	PF04717	Type VI secretion system, phage-baseplate injector
NIAKO_RS35270	PF00916	Sulfate permease family
NIAKO_RS35270	PF01740	STAS domain
NIAKO_RS35280	PF00593	TonB dependent receptor
NIAKO_RS35280	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS35345	PF14338	Mrr N-terminal domain
NIAKO_RS35345	PF04471	Restriction endonuclease
NIAKO_RS35350	PF00295	Glycosyl hydrolases family 28
NIAKO_RS35360	PF00149	Calcineurin-like phosphoesterase
NIAKO_RS35365	PF12706	Beta-lactamase superfamily domain
NIAKO_RS35370	PF00144	Beta-lactamase
NIAKO_RS35440	PF00144	Beta-lactamase
NIAKO_RS35450	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
NIAKO_RS35450	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
NIAKO_RS35460	PF07859	alpha/beta hydrolase fold
NIAKO_RS35460	PF13472	GDSL-like Lipase/Acylhydrolase family
NIAKO_RS35465	PF02805	Metal binding domain of Ada
NIAKO_RS35465	PF12833	Helix-turn-helix domain
NIAKO_RS35470	PF01872	RibD C-terminal domain
NIAKO_RS35480	PF02627	Carboxymuconolactone decarboxylase family
NIAKO_RS35485	PF00507	NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
NIAKO_RS35490	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
NIAKO_RS35495	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
NIAKO_RS35495	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
NIAKO_RS35500	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
NIAKO_RS35500	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
NIAKO_RS35505	PF00146	NADH dehydrogenase
NIAKO_RS35510	PF12838	4Fe-4S dicluster domain
NIAKO_RS35515	PF00499	NADH-ubiquinone/plastoquinone oxidoreductase chain 6
NIAKO_RS35520	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
NIAKO_RS35525	PF00361	Proton-conducting membrane transporter
NIAKO_RS35525	PF01010	NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus
NIAKO_RS35525	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
NIAKO_RS35530	PF00361	Proton-conducting membrane transporter
NIAKO_RS35535	PF00361	Proton-conducting membrane transporter
NIAKO_RS35560	PF00392	Bacterial regulatory proteins, gntR family
NIAKO_RS35560	PF00155	Aminotransferase class I and II
NIAKO_RS35565	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
NIAKO_RS35565	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
NIAKO_RS35575	PF04397	LytTr DNA-binding domain
NIAKO_RS35575	PF00072	Response regulator receiver domain
NIAKO_RS35595	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS35595	PF18719	ArlS sensor domain
NIAKO_RS35595	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS35600	PF00072	Response regulator receiver domain
NIAKO_RS35600	PF00486	Transcriptional regulatory protein, C terminal
NIAKO_RS35610	PF01042	Endoribonuclease L-PSP
NIAKO_RS35615	PF03841	L-seryl-tRNA selenium transferase
NIAKO_RS35620	PF01979	Amidohydrolase family
NIAKO_RS35630	PF01758	Sodium Bile acid symporter family
NIAKO_RS35635	PF01638	HxlR-like helix-turn-helix
NIAKO_RS35640	PF01323	DSBA-like thioredoxin domain
NIAKO_RS35645	PF04264	YceI-like domain
NIAKO_RS35650	PF04264	YceI-like domain
NIAKO_RS35665	PF13089	Polyphosphate kinase N-terminal domain
NIAKO_RS35665	PF17941	Polyphosphate kinase C-terminal domain 1
NIAKO_RS35665	PF02503	Polyphosphate kinase middle domain
NIAKO_RS35665	PF13090	Polyphosphate kinase C-terminal domain 2
NIAKO_RS35690	PF01047	MarR family
NIAKO_RS35690	PF00480	ROK family
NIAKO_RS35695	PF00593	TonB dependent receptor
NIAKO_RS35695	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS35705	PF02646	RmuC family
NIAKO_RS35710	PF00455	DeoR C terminal sensor domain
NIAKO_RS35710	PF08220	DeoR-like helix-turn-helix domain
NIAKO_RS35715	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS35715	PF00593	TonB dependent receptor
NIAKO_RS35730	PF00728	Glycosyl hydrolase family 20, catalytic domain
NIAKO_RS35730	PF02838	Glycosyl hydrolase family 20, domain 2
NIAKO_RS35730	PF07691	PA14 domain
NIAKO_RS35735	PF02447	GntP family permease
NIAKO_RS35765	PF04542	Sigma-70 region 2 
NIAKO_RS35765	PF08281	Sigma-70, region 4
NIAKO_RS35775	PF00593	TonB dependent receptor
NIAKO_RS35775	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS35795	PF01301	Glycosyl hydrolases family 35
NIAKO_RS35800	PF01915	Glycosyl hydrolase family 3 C-terminal domain
NIAKO_RS35800	PF00933	Glycosyl hydrolase family 3 N terminal domain
NIAKO_RS35800	PF14310	Fibronectin type III-like domain
NIAKO_RS35800	PF07691	PA14 domain
NIAKO_RS35810	PF00069	Protein kinase domain
NIAKO_RS35810	PF03781	Sulfatase-modifying factor enzyme 1
NIAKO_RS35815	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS35815	PF00593	TonB dependent receptor
NIAKO_RS35835	PF10114	Sensory domain found in PocR
NIAKO_RS35835	PF12833	Helix-turn-helix domain
NIAKO_RS35850	PF00474	Sodium:solute symporter family
NIAKO_RS35855	PF00356	Bacterial regulatory proteins, lacI family
NIAKO_RS35865	PF00593	TonB dependent receptor
NIAKO_RS35865	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS35870	PF07980	SusD family
NIAKO_RS35870	PF14322	Starch-binding associating with outer membrane
NIAKO_RS35890	PF01472	PUA domain
NIAKO_RS35890	PF00696	Amino acid kinase family
NIAKO_RS35895	PF00171	Aldehyde dehydrogenase family
NIAKO_RS35910	PF00248	Aldo/keto reductase family
NIAKO_RS35915	PF00703	Glycosyl hydrolases family 2
NIAKO_RS35915	PF02837	Glycosyl hydrolases family 2, sugar binding domain
NIAKO_RS35915	PF02836	Glycosyl hydrolases family 2, TIM barrel domain
NIAKO_RS35915	PF02929	Beta galactosidase small chain
NIAKO_RS35915	PF16353	Domain of unknown function(DUF4981)
NIAKO_RS35920	PF00248	Aldo/keto reductase family
NIAKO_RS35940	PF08453	Peptidase family M9 N-terminal
NIAKO_RS35940	PF01752	Collagenase
NIAKO_RS35940	PF18496	Collagenase G catalytic helper subdomain
NIAKO_RS35945	PF00270	DEAD/DEAH box helicase
NIAKO_RS35945	PF00271	Helicase conserved C-terminal domain
NIAKO_RS35945	PF17191	RecG wedge domain
NIAKO_RS35960	PF02622	Uncharacterized ACR, COG1678
NIAKO_RS35965	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS35965	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS35970	PF02547	Queuosine biosynthesis protein
NIAKO_RS35985	PF02381	MraZ protein, putative antitoxin-like
NIAKO_RS35990	PF01795	MraW methylase family
NIAKO_RS36000	PF03717	Penicillin-binding Protein dimerisation domain
NIAKO_RS36000	PF00905	Penicillin binding protein transpeptidase domain
NIAKO_RS36005	PF01225	Mur ligase family, catalytic domain
NIAKO_RS36005	PF02875	Mur ligase family, glutamate ligase domain
NIAKO_RS36005	PF08245	Mur ligase middle domain
NIAKO_RS36010	PF00953	Glycosyl transferase family 4
NIAKO_RS36010	PF10555	Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 
NIAKO_RS36015	PF02875	Mur ligase family, glutamate ligase domain
NIAKO_RS36015	PF08245	Mur ligase middle domain
NIAKO_RS36020	PF01098	Cell cycle protein
NIAKO_RS36025	PF03033	Glycosyltransferase family 28 N-terminal domain
NIAKO_RS36025	PF04101	Glycosyltransferase family 28 C-terminal domain
NIAKO_RS36030	PF01225	Mur ligase family, catalytic domain
NIAKO_RS36030	PF08245	Mur ligase middle domain
NIAKO_RS36030	PF02875	Mur ligase family, glutamate ligase domain
NIAKO_RS36040	PF02491	SHS2 domain inserted in FTSA
NIAKO_RS36045	PF12327	FtsZ family, C-terminal domain
NIAKO_RS36045	PF00091	Tubulin/FtsZ family, GTPase domain
NIAKO_RS36050	PF01370	NAD dependent epimerase/dehydratase family
NIAKO_RS36050	PF08338	Domain of unknown function (DUF1731)
NIAKO_RS36060	PF00005	ABC transporter
NIAKO_RS36070	PF00378	Enoyl-CoA hydratase/isomerase
NIAKO_RS36070	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
NIAKO_RS36070	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
NIAKO_RS36075	PF05161	MOFRL family
NIAKO_RS36075	PF13660	Domain of unknown function (DUF4147)
NIAKO_RS36080	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
NIAKO_RS36080	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
NIAKO_RS36085	PF08264	Anticodon-binding domain of tRNA
NIAKO_RS36085	PF01588	Putative tRNA binding domain
NIAKO_RS36085	PF09334	tRNA synthetases class I (M)
NIAKO_RS36110	PF17676	LD-carboxypeptidase C-terminal domain
NIAKO_RS36110	PF02016	LD-carboxypeptidase N-terminal domain
NIAKO_RS36115	PF02016	LD-carboxypeptidase N-terminal domain
NIAKO_RS36115	PF17676	LD-carboxypeptidase C-terminal domain
NIAKO_RS36125	PF03466	LysR substrate binding domain
NIAKO_RS36125	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
NIAKO_RS36140	PF02705	K+ potassium transporter
NIAKO_RS36180	PF17760	UvrA interaction domain
NIAKO_RS36180	PF00005	ABC transporter
NIAKO_RS36180	PF17755	UvrA DNA-binding domain
NIAKO_RS36200	PF00464	Serine hydroxymethyltransferase
NIAKO_RS36205	PF00483	Nucleotidyl transferase
NIAKO_RS36230	PF13732	Domain of unknown function (DUF4162)
NIAKO_RS36230	PF00005	ABC transporter
NIAKO_RS36275	PF00360	Phytochrome region
NIAKO_RS36275	PF08446	PAS fold
NIAKO_RS36275	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS36275	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS36275	PF01590	GAF domain
NIAKO_RS36285	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
NIAKO_RS36285	PF00672	HAMP domain
NIAKO_RS36285	PF12729	Four helix bundle sensory module for signal transduction
NIAKO_RS36290	PF00672	HAMP domain
NIAKO_RS36290	PF02743	Cache domain
NIAKO_RS36290	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS36290	PF06580	Histidine kinase
NIAKO_RS36325	PF13086	AAA domain
NIAKO_RS36325	PF13195	Protein of unknown function (DUF4011)
NIAKO_RS36325	PF13087	AAA domain
NIAKO_RS36330	PF00578	AhpC/TSA family
NIAKO_RS36340	PF00041	Fibronectin type III domain
NIAKO_RS36340	PF00704	Glycosyl hydrolases family 18
NIAKO_RS36355	PF00704	Glycosyl hydrolases family 18
NIAKO_RS36360	PF00041	Fibronectin type III domain
NIAKO_RS36360	PF00704	Glycosyl hydrolases family 18
NIAKO_RS36365	PF06580	Histidine kinase
NIAKO_RS36365	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS36365	PF07694	5TMR of 5TMR-LYT
NIAKO_RS36395	PF00877	NlpC/P60 family
NIAKO_RS36405	PF12833	Helix-turn-helix domain
NIAKO_RS36405	PF02311	AraC-like ligand binding domain
NIAKO_RS36415	PF00672	HAMP domain
NIAKO_RS36415	PF01627	Hpt domain
NIAKO_RS36415	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS36415	PF00072	Response regulator receiver domain
NIAKO_RS36415	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS36415	PF09984	Uncharacterised signal transduction histidine kinase domain (DUF2222)
NIAKO_RS36430	PF18698	Histidine kinase sensor domain
NIAKO_RS36430	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS36430	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS36430	PF00672	HAMP domain
NIAKO_RS36440	PF01520	N-acetylmuramoyl-L-alanine amidase
NIAKO_RS36455	PF12833	Helix-turn-helix domain
NIAKO_RS36455	PF02311	AraC-like ligand binding domain
NIAKO_RS36475	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS36475	PF12282	Signal transduction histidine kinase
NIAKO_RS36475	PF07568	Histidine kinase
NIAKO_RS36480	PF00223	Photosystem I psaA/psaB protein
NIAKO_RS36480	PF00691	OmpA family
NIAKO_RS36515	PF00331	Glycosyl hydrolase family 10
NIAKO_RS36515	PF02018	Carbohydrate binding domain
NIAKO_RS36515	PF06452	Carbohydrate family 9 binding domain-like
NIAKO_RS36515	PF00395	S-layer homology domain
NIAKO_RS36525	PF01569	PAP2 superfamily
NIAKO_RS36555	PF04545	Sigma-70, region 4
NIAKO_RS36555	PF04542	Sigma-70 region 2 
NIAKO_RS36560	PF00072	Response regulator receiver domain
NIAKO_RS36565	PF00072	Response regulator receiver domain
NIAKO_RS36565	PF01339	CheB methylesterase
NIAKO_RS36570	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS36570	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS36580	PF01471	Putative peptidoglycan binding domain
NIAKO_RS36580	PF03734	L,D-transpeptidase catalytic domain
NIAKO_RS36590	PF07694	5TMR of 5TMR-LYT
NIAKO_RS36590	PF13492	GAF domain
NIAKO_RS36590	PF06580	Histidine kinase
NIAKO_RS36590	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS36595	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS36595	PF07694	5TMR of 5TMR-LYT
NIAKO_RS36595	PF06580	Histidine kinase
NIAKO_RS36615	PF16861	Carbamoyltransferase C-terminus
NIAKO_RS36615	PF02543	Carbamoyltransferase N-terminus
NIAKO_RS36620	PF08534	Redoxin
NIAKO_RS36625	PF00072	Response regulator receiver domain
NIAKO_RS36625	PF01584	CheW-like domain
NIAKO_RS36630	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS36630	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS36645	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS36645	PF00672	HAMP domain
NIAKO_RS36645	PF02743	Cache domain
NIAKO_RS36645	PF06580	Histidine kinase
NIAKO_RS36660	PF07694	5TMR of 5TMR-LYT
NIAKO_RS36660	PF13492	GAF domain
NIAKO_RS36660	PF06580	Histidine kinase
NIAKO_RS36660	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS36665	PF05593	RHS Repeat
NIAKO_RS36665	PF03527	RHS protein
NIAKO_RS36670	PF08446	PAS fold
NIAKO_RS36670	PF00360	Phytochrome region
NIAKO_RS36670	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS36670	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS36670	PF01590	GAF domain
NIAKO_RS36675	PF01510	N-acetylmuramoyl-L-alanine amidase
NIAKO_RS36685	PF07730	Histidine kinase
NIAKO_RS36685	PF17200	Single Cache domain 2
NIAKO_RS36695	PF00578	AhpC/TSA family
NIAKO_RS36725	PF00691	OmpA family
NIAKO_RS36725	PF04972	BON domain
NIAKO_RS36770	PF02884	Polysaccharide lyase family 8, C-terminal beta-sandwich domain
NIAKO_RS36770	PF08124	Polysaccharide lyase family 8, N terminal alpha-helical domain
NIAKO_RS36770	PF02278	Polysaccharide lyase family 8, super-sandwich domain
NIAKO_RS36775	PF00535	Glycosyl transferase family 2
NIAKO_RS36780	PF08241	Methyltransferase domain
NIAKO_RS36785	PF00535	Glycosyl transferase family 2
NIAKO_RS36805	PF08534	Redoxin
NIAKO_RS36815	PF06580	Histidine kinase
NIAKO_RS36815	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS36815	PF07694	5TMR of 5TMR-LYT
NIAKO_RS36820	PF06580	Histidine kinase
NIAKO_RS36820	PF07694	5TMR of 5TMR-LYT
NIAKO_RS36830	PF00942	Cellulose binding domain
NIAKO_RS36830	PF02011	Glycosyl hydrolase family 48
NIAKO_RS36830	PF00759	Glycosyl hydrolase family 9
NIAKO_RS36860	PF01695	IstB-like ATP binding protein
NIAKO_RS36870	PF02371	Transposase IS116/IS110/IS902 family
NIAKO_RS36870	PF01548	Transposase
NIAKO_RS36885	PF00578	AhpC/TSA family
NIAKO_RS36895	PF00072	Response regulator receiver domain
NIAKO_RS36915	PF00561	alpha/beta hydrolase fold
NIAKO_RS36915	PF08386	TAP-like protein
NIAKO_RS36920	PF00072	Response regulator receiver domain
NIAKO_RS36920	PF09984	Uncharacterised signal transduction histidine kinase domain (DUF2222)
NIAKO_RS36920	PF01627	Hpt domain
NIAKO_RS36920	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS36920	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS36920	PF00672	HAMP domain
NIAKO_RS36930	PF07859	alpha/beta hydrolase fold
NIAKO_RS36940	PF07715	TonB-dependent Receptor Plug Domain
NIAKO_RS36940	PF00593	TonB dependent receptor
NIAKO_RS36950	PF00072	Response regulator receiver domain
NIAKO_RS36950	PF00486	Transcriptional regulatory protein, C terminal
NIAKO_RS36970	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS36970	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS36970	PF00989	PAS fold
NIAKO_RS36970	PF16736	Single Cache-like 
NIAKO_RS36990	PF01638	HxlR-like helix-turn-helix
NIAKO_RS37000	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS37000	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS37000	PF00672	HAMP domain
NIAKO_RS37025	PF00535	Glycosyl transferase family 2
NIAKO_RS37035	PF00226	DnaJ domain
NIAKO_RS37035	PF01556	DnaJ C terminal domain
NIAKO_RS37035	PF00684	DnaJ central domain
NIAKO_RS37055	PF00691	OmpA family
NIAKO_RS37055	PF01389	OmpA-like transmembrane domain
NIAKO_RS37080	PF00030	Beta/Gamma crystallin
NIAKO_RS37095	PF08241	Methyltransferase domain
NIAKO_RS37105	PF13274	Protein of unknown function (DUF4065)
NIAKO_RS37110	PF06580	Histidine kinase
NIAKO_RS37110	PF07694	5TMR of 5TMR-LYT
NIAKO_RS37110	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS37115	PF03793	PASTA domain
NIAKO_RS37115	PF00069	Protein kinase domain
NIAKO_RS37140	PF00326	Prolyl oligopeptidase family
NIAKO_RS37140	PF07676	WD40-like Beta Propeller Repeat
NIAKO_RS37150	PF01510	N-acetylmuramoyl-L-alanine amidase
NIAKO_RS37170	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS37170	PF01590	GAF domain
NIAKO_RS37170	PF00360	Phytochrome region
NIAKO_RS37170	PF08446	PAS fold
NIAKO_RS37170	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS37175	PF00158	Sigma-54 interaction domain
NIAKO_RS37175	PF02954	Bacterial regulatory protein, Fis family
NIAKO_RS37175	PF01590	GAF domain
NIAKO_RS37180	PF00691	OmpA family
NIAKO_RS37180	PF00223	Photosystem I psaA/psaB protein
NIAKO_RS37185	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS37185	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS37185	PF00072	Response regulator receiver domain
NIAKO_RS37185	PF09308	LuxQ, periplasmic
NIAKO_RS37190	PF04079	Segregation and condensation complex subunit ScpB
NIAKO_RS37195	PF00583	Acetyltransferase (GNAT) family
NIAKO_RS37205	PF18674	TarS beta-glycosyltransferase C-terminal domain 1
NIAKO_RS37205	PF00535	Glycosyl transferase family 2
NIAKO_RS37215	PF00535	Glycosyl transferase family 2
NIAKO_RS37230	PF00271	Helicase conserved C-terminal domain
NIAKO_RS37230	PF00570	HRDC domain
NIAKO_RS37230	PF00270	DEAD/DEAH box helicase
NIAKO_RS37230	PF16124	RecQ zinc-binding
NIAKO_RS37230	PF09382	RQC domain
NIAKO_RS37240	PF01476	LysM domain
NIAKO_RS37240	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
NIAKO_RS37245	PF02397	Bacterial sugar transferase
NIAKO_RS37275	PF00578	AhpC/TSA family
NIAKO_RS37285	PF01590	GAF domain
NIAKO_RS37285	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS37285	PF00360	Phytochrome region
NIAKO_RS37285	PF08446	PAS fold
NIAKO_RS37285	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS37295	PF13488	Glycine zipper
NIAKO_RS37295	PF00691	OmpA family
NIAKO_RS37310	PF02638	Glycosyl hydrolase-like 10
NIAKO_RS37335	PF01381	Helix-turn-helix
NIAKO_RS37375	PF00535	Glycosyl transferase family 2
NIAKO_RS37380	PF04151	Bacterial pre-peptidase C-terminal domain
NIAKO_RS37380	PF04389	Peptidase family M28
NIAKO_RS37385	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS37385	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS37390	PF09984	Uncharacterised signal transduction histidine kinase domain (DUF2222)
NIAKO_RS37390	PF00072	Response regulator receiver domain
NIAKO_RS37390	PF01627	Hpt domain
NIAKO_RS37390	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS37390	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS37390	PF00672	HAMP domain
NIAKO_RS37395	PF06736	Protein of unknown function (DUF1211)
NIAKO_RS37430	PF00535	Glycosyl transferase family 2
NIAKO_RS37440	PF02743	Cache domain
NIAKO_RS37440	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS37440	PF06580	Histidine kinase
NIAKO_RS37440	PF00672	HAMP domain
NIAKO_RS37460	PF08446	PAS fold
NIAKO_RS37460	PF00512	His Kinase A (phospho-acceptor) domain
NIAKO_RS37460	PF00360	Phytochrome region
NIAKO_RS37460	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NIAKO_RS37460	PF01590	GAF domain
NIAKO_RS37480	PF00027	Cyclic nucleotide-binding domain
NIAKO_RS37480	PF13545	Crp-like helix-turn-helix domain
NIAKO_RS37505	PF13472	GDSL-like Lipase/Acylhydrolase family
NIAKO_RS37505	PF07859	alpha/beta hydrolase fold
