NIAKO_RS00010 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS00010 SM00760 Bacterial dnaA protein helix-turn-helix domain NIAKO_RS00045 SM00360 RNA recognition motif NIAKO_RS00130 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS00145 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS00150 SM00091 PAS domain NIAKO_RS00150 SM00138 Methyltransferase, chemotaxis proteins NIAKO_RS00150 SM00387 Histidine kinase-like ATPases NIAKO_RS00150 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS00155 SM00448 cheY-homologous receiver domain NIAKO_RS00165 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS00165 SM00448 cheY-homologous receiver domain NIAKO_RS00170 SM00387 Histidine kinase-like ATPases NIAKO_RS00170 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS00220 SM00947 Carbonic anhydrase NIAKO_RS00225 SM00387 Histidine kinase-like ATPases NIAKO_RS00225 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS00225 SM00448 cheY-homologous receiver domain NIAKO_RS00230 SM00448 cheY-homologous receiver domain NIAKO_RS00230 SM00850 LytTr DNA-binding domain NIAKO_RS00275 SM01217 NIAKO_RS00275 NIAKO_RS00290 SM00420 helix_turn_helix, Deoxyribose operon repressor NIAKO_RS00290 SM01134 NIAKO_RS00290 NIAKO_RS00305 SM00861 Transketolase, pyrimidine binding domain NIAKO_RS00320 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS00350 SM00248 ankyrin repeats NIAKO_RS00385 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. NIAKO_RS00455 SM00829 Enoylreductase NIAKO_RS00465 SM00232 JAB/MPN domain NIAKO_RS00470 SM00450 Rhodanese Homology Domain NIAKO_RS00485 SM01329 NIAKO_RS00485 NIAKO_RS00625 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS00660 SM01360 NIAKO_RS00660 NIAKO_RS00665 SM01359 NIAKO_RS00665 NIAKO_RS00675 SM00881 CoA binding domain NIAKO_RS00680 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS00690 SM00919 Malic enzyme, NAD binding domain NIAKO_RS00690 SM01274 NIAKO_RS00690 NIAKO_RS00700 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS00720 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS00730 SM00345 helix_turn_helix gluconate operon transcriptional repressor NIAKO_RS00765 SM01133 NIAKO_RS00765 NIAKO_RS00810 SM00957 SecA DEAD-like domain NIAKO_RS00810 SM00958 SecA preprotein cross-linking domain NIAKO_RS00820 SM00028 Tetratricopeptide repeats NIAKO_RS00885 SM01400 NIAKO_RS00885 NIAKO_RS00910 SM00861 Transketolase, pyrimidine binding domain NIAKO_RS00950 SM00354 helix_turn _helix lactose operon repressor NIAKO_RS01005 SM00849 Metallo-beta-lactamase superfamily NIAKO_RS01025 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins NIAKO_RS01050 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS01075 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS01105 SM00645 Papain family cysteine protease NIAKO_RS01155 SM00965 Secretin and TonB N terminus short domain NIAKO_RS01165 SM00060 Fibronectin type 3 domain NIAKO_RS01185 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS01200 SM00530 Helix-turn-helix XRE-family like proteins NIAKO_RS01205 SM00448 cheY-homologous receiver domain NIAKO_RS01210 SM00073 Histidine Phosphotransfer domain NIAKO_RS01210 SM00260 Two component signalling adaptor domain NIAKO_RS01210 SM00387 Histidine kinase-like ATPases NIAKO_RS01210 SM01231 NIAKO_RS01210 NIAKO_RS01215 SM00260 Two component signalling adaptor domain NIAKO_RS01220 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NIAKO_RS01220 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NIAKO_RS01230 SM00138 Methyltransferase, chemotaxis proteins NIAKO_RS01265 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS01285 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor NIAKO_RS01305 SM00320 WD40 repeats NIAKO_RS01330 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS01350 SM00448 cheY-homologous receiver domain NIAKO_RS01350 SM00850 LytTr DNA-binding domain NIAKO_RS01360 SM00460 Transglutaminase/protease-like homologues NIAKO_RS01395 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS01435 SM00861 Transketolase, pyrimidine binding domain NIAKO_RS01525 SM00841 Elongation factor P, C-terminal NIAKO_RS01525 SM01185 NIAKO_RS01525 NIAKO_RS01535 SM00878 Biotin carboxylase C-terminal domain NIAKO_RS01550 SM00642 Alpha-amylase domain NIAKO_RS01555 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. NIAKO_RS01580 SM00740 NIAKO_RS01580 NIAKO_RS01585 SM00450 Rhodanese Homology Domain NIAKO_RS01590 SM00740 NIAKO_RS01590 NIAKO_RS01630 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS01655 SM00924 MgtE intracellular N domain NIAKO_RS01660 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain NIAKO_RS01700 SM00028 Tetratricopeptide repeats NIAKO_RS02000 SM00631 NIAKO_RS02000 NIAKO_RS02015 SM00347 helix_turn_helix multiple antibiotic resistance protein NIAKO_RS02070 SM00487 DEAD-like helicases superfamily NIAKO_RS02070 SM00490 helicase superfamily c-terminal domain NIAKO_RS02120 SM00965 Secretin and TonB N terminus short domain NIAKO_RS02145 SM00095 Transthyretin NIAKO_RS02195 SM00988 UreE urease accessory protein, N-terminal domain NIAKO_RS02220 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NIAKO_RS02225 SM01092 CO dehydrogenase flavoprotein C-terminal domain NIAKO_RS02230 SM00344 helix_turn_helix ASNC type NIAKO_RS02325 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins NIAKO_RS02345 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS02350 SM00247 Beta/gamma crystallins NIAKO_RS02370 SM00345 helix_turn_helix gluconate operon transcriptional repressor NIAKO_RS02380 SM00448 cheY-homologous receiver domain NIAKO_RS02405 SM00100 Cyclic nucleotide-monophosphate binding domain NIAKO_RS02405 SM00419 helix_turn_helix, cAMP Regulatory protein NIAKO_RS02440 SM00924 MgtE intracellular N domain NIAKO_RS02445 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS02455 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS02470 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS02525 SM00387 Histidine kinase-like ATPases NIAKO_RS02555 SM00857 Resolvase, N terminal domain NIAKO_RS02560 SM00450 Rhodanese Homology Domain NIAKO_RS02575 SM00481 DNA polymerase alpha chain like domain NIAKO_RS02590 SM00478 endonuclease III NIAKO_RS02595 SM00345 helix_turn_helix gluconate operon transcriptional repressor NIAKO_RS02595 SM00866 NIAKO_RS02595 NIAKO_RS02645 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS02690 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NIAKO_RS02710 SM00729 Elongator protein 3, MiaB family, Radical SAM NIAKO_RS02715 SM00852 Probable molybdopterin binding domain NIAKO_RS02730 SM00852 Probable molybdopterin binding domain NIAKO_RS02750 SM00345 helix_turn_helix gluconate operon transcriptional repressor NIAKO_RS02750 SM00895 NIAKO_RS02750 NIAKO_RS02765 SM01130 NIAKO_RS02765 NIAKO_RS02775 SM01130 NIAKO_RS02775 NIAKO_RS02805 SM00387 Histidine kinase-like ATPases NIAKO_RS02805 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS02810 SM00481 DNA polymerase alpha chain like domain NIAKO_RS02810 SM00483 DNA polymerase X family NIAKO_RS02820 SM00878 Biotin carboxylase C-terminal domain NIAKO_RS02920 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS02980 SM00429 ig-like, plexins, transcription factors NIAKO_RS02990 SM00829 Enoylreductase NIAKO_RS02995 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS03000 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS03035 SM00448 cheY-homologous receiver domain NIAKO_RS03035 SM00850 LytTr DNA-binding domain NIAKO_RS03090 SM00344 helix_turn_helix ASNC type NIAKO_RS03110 SM00710 Parallel beta-helix repeats NIAKO_RS03135 SM00448 cheY-homologous receiver domain NIAKO_RS03135 SM00850 LytTr DNA-binding domain NIAKO_RS03200 SM00387 Histidine kinase-like ATPases NIAKO_RS03205 SM00421 helix_turn_helix, Lux Regulon NIAKO_RS03205 SM00448 cheY-homologous receiver domain NIAKO_RS03235 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS03245 SM00850 LytTr DNA-binding domain NIAKO_RS03290 SM00347 helix_turn_helix multiple antibiotic resistance protein NIAKO_RS03295 SM00850 LytTr DNA-binding domain NIAKO_RS03315 SM00812 Alpha-L-fucosidase NIAKO_RS03360 SM00421 helix_turn_helix, Lux Regulon NIAKO_RS03360 SM00448 cheY-homologous receiver domain NIAKO_RS03365 SM00028 Tetratricopeptide repeats NIAKO_RS03365 SM00387 Histidine kinase-like ATPases NIAKO_RS03380 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS03385 SM00028 Tetratricopeptide repeats NIAKO_RS03425 SM00642 Alpha-amylase domain NIAKO_RS03455 SM00813 Alpha-L-arabinofuranosidase C-terminus NIAKO_RS03480 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS03490 SM00420 helix_turn_helix, Deoxyribose operon repressor NIAKO_RS03490 SM01134 NIAKO_RS03490 NIAKO_RS03530 SM00710 Parallel beta-helix repeats NIAKO_RS03545 SM00813 Alpha-L-arabinofuranosidase C-terminus NIAKO_RS03575 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. NIAKO_RS03590 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. NIAKO_RS03650 SM00633 Glycosyl hydrolase family 10 NIAKO_RS03670 SM00354 helix_turn _helix lactose operon repressor NIAKO_RS03690 SM00448 cheY-homologous receiver domain NIAKO_RS03690 SM00862 Transcriptional regulatory protein, C terminal NIAKO_RS03695 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS03705 SM00014 Acid phosphatase homologues NIAKO_RS03775 SM00247 Beta/gamma crystallins NIAKO_RS03775 SM00606 Cellulose Binding Domain Type IV NIAKO_RS03795 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS03830 SM00867 YceI-like domain NIAKO_RS03835 SM00867 YceI-like domain NIAKO_RS03840 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS03845 SM00529 Helix-turn-helix diphteria tox regulatory element NIAKO_RS03875 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS03880 SM01092 CO dehydrogenase flavoprotein C-terminal domain NIAKO_RS03885 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NIAKO_RS03905 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS03940 SM00813 Alpha-L-arabinofuranosidase C-terminus NIAKO_RS04020 SM00247 Beta/gamma crystallins NIAKO_RS04020 SM00606 Cellulose Binding Domain Type IV NIAKO_RS04035 SM01217 NIAKO_RS04035 NIAKO_RS04120 SM00450 Rhodanese Homology Domain NIAKO_RS04120 SM00849 Metallo-beta-lactamase superfamily NIAKO_RS04125 SM00450 Rhodanese Homology Domain NIAKO_RS04135 SM00849 Metallo-beta-lactamase superfamily NIAKO_RS04145 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS04160 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS04205 SM00448 cheY-homologous receiver domain NIAKO_RS04215 SM00448 cheY-homologous receiver domain NIAKO_RS04215 SM00850 LytTr DNA-binding domain NIAKO_RS04230 SM00822 NIAKO_RS04230 NIAKO_RS04305 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS04320 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS04325 SM00387 Histidine kinase-like ATPases NIAKO_RS04325 SM00433 TopoisomeraseII NIAKO_RS04340 SM00434 DNA Topoisomerase IV NIAKO_RS04380 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS04405 SM00904 Riboflavin kinase NIAKO_RS04415 SM00420 helix_turn_helix, Deoxyribose operon repressor NIAKO_RS04415 SM01134 NIAKO_RS04415 NIAKO_RS04420 SM00646 NIAKO_RS04420 NIAKO_RS04445 SM00905 Dihydroneopterin aldolase NIAKO_RS04485 SM00316 Ribosomal protein S1-like RNA-binding domain NIAKO_RS04485 SM00357 Cold shock protein domain NIAKO_RS04485 SM00955 NIAKO_RS04485 NIAKO_RS04555 SM01130 NIAKO_RS04555 NIAKO_RS04715 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS04775 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS04775 SM01086 C-terminal, D2-small domain, of ClpB protein NIAKO_RS04900 SM00448 cheY-homologous receiver domain NIAKO_RS04900 SM00862 Transcriptional regulatory protein, C terminal NIAKO_RS04905 SM00387 Histidine kinase-like ATPases NIAKO_RS04905 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS04920 SM00636 NIAKO_RS04920 NIAKO_RS04945 SM00849 Metallo-beta-lactamase superfamily NIAKO_RS04960 SM01323 NIAKO_RS04960 NIAKO_RS04975 SM00883 Chaperonin 10 Kd subunit NIAKO_RS05035 SM00729 Elongator protein 3, MiaB family, Radical SAM NIAKO_RS05055 SM00481 DNA polymerase alpha chain like domain NIAKO_RS05100 SM00533 DNA-binding domain of DNA mismatch repair MUTS family NIAKO_RS05100 SM00534 ATPase domain of DNA mismatch repair MUTS family NIAKO_RS05105 SM00116 Domain in cystathionine beta-synthase and other proteins. NIAKO_RS05215 SM00387 Histidine kinase-like ATPases NIAKO_RS05220 SM00421 helix_turn_helix, Lux Regulon NIAKO_RS05220 SM00448 cheY-homologous receiver domain NIAKO_RS05240 SM00100 Cyclic nucleotide-monophosphate binding domain NIAKO_RS05320 SM00507 HNH nucleases NIAKO_RS05485 SM01360 NIAKO_RS05485 NIAKO_RS05500 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins NIAKO_RS05505 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS05525 SM01324 NIAKO_RS05525 NIAKO_RS05530 SM00091 PAS domain NIAKO_RS05530 SM00387 Histidine kinase-like ATPases NIAKO_RS05535 SM00421 helix_turn_helix, Lux Regulon NIAKO_RS05535 SM00448 cheY-homologous receiver domain NIAKO_RS05545 SM00448 cheY-homologous receiver domain NIAKO_RS05555 SM00773 Proposed nucleic acid binding domain NIAKO_RS05560 SM00091 PAS domain NIAKO_RS05600 SM00996 S-adenosyl-L-homocysteine hydrolase NIAKO_RS05600 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain NIAKO_RS05610 SM00421 helix_turn_helix, Lux Regulon NIAKO_RS05625 SM00470 ParB-like nuclease domain NIAKO_RS05635 SM00849 Metallo-beta-lactamase superfamily NIAKO_RS05715 SM00937 NIAKO_RS05715 NIAKO_RS05775 SM00769 Water Stress and Hypersensitive response NIAKO_RS05865 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS05870 SM00729 Elongator protein 3, MiaB family, Radical SAM NIAKO_RS05910 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS05935 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS05950 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS05950 SM00448 cheY-homologous receiver domain NIAKO_RS05955 SM00387 Histidine kinase-like ATPases NIAKO_RS05995 SM00420 helix_turn_helix, Deoxyribose operon repressor NIAKO_RS05995 SM01134 NIAKO_RS05995 NIAKO_RS06025 SM00646 NIAKO_RS06025 NIAKO_RS06035 SM00563 Phosphate acyltransferases NIAKO_RS06040 SM00986 Uracil DNA glycosylase superfamily NIAKO_RS06040 SM00987 UreE urease accessory protein, C-terminal domain NIAKO_RS06080 SM00448 cheY-homologous receiver domain NIAKO_RS06135 SM00422 helix_turn_helix, mercury resistance NIAKO_RS06155 SM00487 DEAD-like helicases superfamily NIAKO_RS06155 SM00490 helicase superfamily c-terminal domain NIAKO_RS06185 SM00890 Domain of unknown function NIAKO_RS06380 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS06385 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS06385 SM00448 cheY-homologous receiver domain NIAKO_RS06390 SM00387 Histidine kinase-like ATPases NIAKO_RS06390 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS06415 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS06420 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS06425 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain NIAKO_RS06455 SM00255 Toll - interleukin 1 - resistance NIAKO_RS06495 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS06505 SM00829 Enoylreductase NIAKO_RS06515 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS06520 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS06595 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS06595 SM00387 Histidine kinase-like ATPases NIAKO_RS06595 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS06595 SM00448 cheY-homologous receiver domain NIAKO_RS06610 SM00060 Fibronectin type 3 domain NIAKO_RS06700 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS06870 SM00028 Tetratricopeptide repeats NIAKO_RS06870 SM00387 Histidine kinase-like ATPases NIAKO_RS06875 SM00421 helix_turn_helix, Lux Regulon NIAKO_RS06875 SM00448 cheY-homologous receiver domain NIAKO_RS06895 SM00028 Tetratricopeptide repeats NIAKO_RS06895 SM00386 HAT (Half-A-TPR) repeats NIAKO_RS06910 SM00421 helix_turn_helix, Lux Regulon NIAKO_RS06910 SM00448 cheY-homologous receiver domain NIAKO_RS06930 SM00345 helix_turn_helix gluconate operon transcriptional repressor NIAKO_RS06930 SM00895 NIAKO_RS06930 NIAKO_RS06965 SM00271 DnaJ molecular chaperone homology domain NIAKO_RS06975 SM00357 Cold shock protein domain NIAKO_RS06980 SM00487 DEAD-like helicases superfamily NIAKO_RS06980 SM00490 helicase superfamily c-terminal domain NIAKO_RS07005 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS07010 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS07090 SM00422 helix_turn_helix, mercury resistance NIAKO_RS07130 SM00360 RNA recognition motif NIAKO_RS07130 SM00361 RNA recognition motif NIAKO_RS07135 SM00100 Cyclic nucleotide-monophosphate binding domain NIAKO_RS07175 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS07200 SM00345 helix_turn_helix gluconate operon transcriptional repressor NIAKO_RS07270 SM00100 Cyclic nucleotide-monophosphate binding domain NIAKO_RS07280 SM00100 Cyclic nucleotide-monophosphate binding domain NIAKO_RS07290 SM00448 cheY-homologous receiver domain NIAKO_RS07290 SM00850 LytTr DNA-binding domain NIAKO_RS07335 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS07340 SM00421 helix_turn_helix, Lux Regulon NIAKO_RS07340 SM00448 cheY-homologous receiver domain NIAKO_RS07345 SM00028 Tetratricopeptide repeats NIAKO_RS07345 SM00387 Histidine kinase-like ATPases NIAKO_RS07350 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins NIAKO_RS07355 SM00060 Fibronectin type 3 domain NIAKO_RS07355 SM00710 Parallel beta-helix repeats NIAKO_RS07365 SM00028 Tetratricopeptide repeats NIAKO_RS07385 SM00448 cheY-homologous receiver domain NIAKO_RS07385 SM00850 LytTr DNA-binding domain NIAKO_RS07405 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor NIAKO_RS07415 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins NIAKO_RS07520 SM00967 RNA 2'-O ribose methyltransferase substrate binding NIAKO_RS07580 SM00450 Rhodanese Homology Domain NIAKO_RS07615 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS07660 SM00825 Beta-ketoacyl synthase NIAKO_RS07705 SM00968 SMC proteins Flexible Hinge Domain NIAKO_RS07740 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS07745 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen NIAKO_RS07810 SM00448 cheY-homologous receiver domain NIAKO_RS07810 SM00850 LytTr DNA-binding domain NIAKO_RS07825 SM00861 Transketolase, pyrimidine binding domain NIAKO_RS07860 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS07860 SM00448 cheY-homologous receiver domain NIAKO_RS07865 SM00422 helix_turn_helix, mercury resistance NIAKO_RS07890 SM00829 Enoylreductase NIAKO_RS07895 SM00506 Appr-1"-p processing enzyme NIAKO_RS07935 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain NIAKO_RS07935 SM00437 Bacterial DNA topoisomerase I DNA-binding domain NIAKO_RS07935 SM00493 NIAKO_RS07935 NIAKO_RS07940 SM00796 Allophanate hydrolase subunit 1 NIAKO_RS07945 SM00797 Allophanate hydrolase subunit 2 NIAKO_RS07990 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. NIAKO_RS07990 SM00245 tail specific protease NIAKO_RS08040 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS08060 SM00822 NIAKO_RS08060 NIAKO_RS08090 SM00387 Histidine kinase-like ATPases NIAKO_RS08090 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS08090 SM00448 cheY-homologous receiver domain NIAKO_RS08220 SM00360 RNA recognition motif NIAKO_RS08220 SM00361 RNA recognition motif NIAKO_RS08230 SM00606 Cellulose Binding Domain Type IV NIAKO_RS08235 SM00487 DEAD-like helicases superfamily NIAKO_RS08235 SM00490 helicase superfamily c-terminal domain NIAKO_RS08300 SM00360 RNA recognition motif NIAKO_RS08300 SM00361 RNA recognition motif NIAKO_RS08325 SM00729 Elongator protein 3, MiaB family, Radical SAM NIAKO_RS08360 SM00860 SMI1 / KNR4 family NIAKO_RS08370 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins NIAKO_RS08385 SM00060 Fibronectin type 3 domain NIAKO_RS08475 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS08490 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS08495 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS08500 SM00822 NIAKO_RS08500 NIAKO_RS08530 SM00387 Histidine kinase-like ATPases NIAKO_RS08535 SM00421 helix_turn_helix, Lux Regulon NIAKO_RS08535 SM00448 cheY-homologous receiver domain NIAKO_RS08550 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS08560 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS08580 SM00448 cheY-homologous receiver domain NIAKO_RS08580 SM00862 Transcriptional regulatory protein, C terminal NIAKO_RS08585 SM00387 Histidine kinase-like ATPases NIAKO_RS08585 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS08635 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS08660 SM00100 Cyclic nucleotide-monophosphate binding domain NIAKO_RS08665 SM00867 YceI-like domain NIAKO_RS08705 SM00220 Serine/Threonine protein kinases, catalytic domain NIAKO_RS08730 SM00530 Helix-turn-helix XRE-family like proteins NIAKO_RS08745 SM00448 cheY-homologous receiver domain NIAKO_RS08785 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS08865 SM00448 cheY-homologous receiver domain NIAKO_RS08870 SM00421 helix_turn_helix, Lux Regulon NIAKO_RS08870 SM00448 cheY-homologous receiver domain NIAKO_RS08875 SM00091 PAS domain NIAKO_RS08875 SM00387 Histidine kinase-like ATPases NIAKO_RS08890 SM00782 PhnA Zinc-Ribbon NIAKO_RS08945 SM00320 WD40 repeats NIAKO_RS08975 SM00448 cheY-homologous receiver domain NIAKO_RS09040 SM00060 Fibronectin type 3 domain NIAKO_RS09080 SM00448 cheY-homologous receiver domain NIAKO_RS09145 SM00448 cheY-homologous receiver domain NIAKO_RS09145 SM00862 Transcriptional regulatory protein, C terminal NIAKO_RS09150 SM00387 Histidine kinase-like ATPases NIAKO_RS09150 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS09160 SM00387 Histidine kinase-like ATPases NIAKO_RS09160 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS09165 SM00831 Cation transporter/ATPase, N-terminus NIAKO_RS09170 SM00100 Cyclic nucleotide-monophosphate binding domain NIAKO_RS09170 SM00419 helix_turn_helix, cAMP Regulatory protein NIAKO_RS09170 SM00448 cheY-homologous receiver domain NIAKO_RS09215 SM00749 bacterial OsmY and nodulation domain NIAKO_RS09225 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS09265 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS09275 SM00829 Enoylreductase NIAKO_RS09310 SM00749 bacterial OsmY and nodulation domain NIAKO_RS09350 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS09360 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS09445 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor NIAKO_RS09475 SM00100 Cyclic nucleotide-monophosphate binding domain NIAKO_RS09520 SM00320 WD40 repeats NIAKO_RS09520 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. NIAKO_RS09525 SM00729 Elongator protein 3, MiaB family, Radical SAM NIAKO_RS09535 SM00100 Cyclic nucleotide-monophosphate binding domain NIAKO_RS09535 SM00419 helix_turn_helix, cAMP Regulatory protein NIAKO_RS09535 SM00448 cheY-homologous receiver domain NIAKO_RS09575 SM00091 PAS domain NIAKO_RS09575 SM00387 Histidine kinase-like ATPases NIAKO_RS09575 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS09600 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins NIAKO_RS09660 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS09735 SM00448 cheY-homologous receiver domain NIAKO_RS09790 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. NIAKO_RS09845 SM00946 Prolyl-tRNA synthetase, C-terminal NIAKO_RS09900 SM00967 RNA 2'-O ribose methyltransferase substrate binding NIAKO_RS09925 SM00562 NIAKO_RS09925 NIAKO_RS09965 SM00947 Carbonic anhydrase NIAKO_RS09985 SM00028 Tetratricopeptide repeats NIAKO_RS10005 SM00244 prohibitin homologues NIAKO_RS10015 SM00363 S4 RNA-binding domain NIAKO_RS10050 SM00448 cheY-homologous receiver domain NIAKO_RS10050 SM00850 LytTr DNA-binding domain NIAKO_RS10055 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS10085 SM00028 Tetratricopeptide repeats NIAKO_RS10100 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. NIAKO_RS10110 SM00327 von Willebrand factor (vWF) type A domain NIAKO_RS10150 SM00387 Histidine kinase-like ATPases NIAKO_RS10160 SM00434 DNA Topoisomerase IV NIAKO_RS10195 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS10305 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS10325 SM00849 Metallo-beta-lactamase superfamily NIAKO_RS10330 SM00534 ATPase domain of DNA mismatch repair MUTS family NIAKO_RS10355 SM00644 NIAKO_RS10355 NIAKO_RS10365 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS10385 SM00836 DALR anticodon binding domain NIAKO_RS10385 SM01016 Arginyl tRNA synthetase N terminal dom NIAKO_RS10390 SM00028 Tetratricopeptide repeats NIAKO_RS10395 SM00642 Alpha-amylase domain NIAKO_RS10410 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS10460 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS10470 SM00870 NIAKO_RS10470 NIAKO_RS10585 SM00642 Alpha-amylase domain NIAKO_RS10620 SM00729 Elongator protein 3, MiaB family, Radical SAM NIAKO_RS10770 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain NIAKO_RS10800 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS10850 SM00347 helix_turn_helix multiple antibiotic resistance protein NIAKO_RS10865 SM00935 Outer membrane protein (OmpH-like) NIAKO_RS10910 SM00867 YceI-like domain NIAKO_RS10950 SM00812 Alpha-L-fucosidase NIAKO_RS11030 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS11035 SM00248 ankyrin repeats NIAKO_RS11040 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS11095 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS11120 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS11125 SM00812 Alpha-L-fucosidase NIAKO_RS11160 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS11210 SM00387 Histidine kinase-like ATPases NIAKO_RS11220 SM00749 bacterial OsmY and nodulation domain NIAKO_RS11230 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. NIAKO_RS11295 SM00861 Transketolase, pyrimidine binding domain NIAKO_RS11310 SM00278 Helix-hairpin-helix DNA-binding motif class 1 NIAKO_RS11310 SM00481 DNA polymerase alpha chain like domain NIAKO_RS11310 SM00483 DNA polymerase X family NIAKO_RS11320 SM00749 bacterial OsmY and nodulation domain NIAKO_RS11325 SM00278 Helix-hairpin-helix DNA-binding motif class 1 NIAKO_RS11325 SM00532 Ligase N family NIAKO_RS11350 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS11385 SM00926 Molybdopterin oxidoreductase Fe4S4 domain NIAKO_RS11410 SM00849 Metallo-beta-lactamase superfamily NIAKO_RS11445 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS11455 SM00421 helix_turn_helix, Lux Regulon NIAKO_RS11455 SM00448 cheY-homologous receiver domain NIAKO_RS11510 SM00849 Metallo-beta-lactamase superfamily NIAKO_RS11520 SM00823 Phosphopantetheine attachment site NIAKO_RS11525 SM00823 Phosphopantetheine attachment site NIAKO_RS11530 SM00823 Phosphopantetheine attachment site NIAKO_RS11530 SM01294 NIAKO_RS11530 NIAKO_RS11680 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS11680 SM00387 Histidine kinase-like ATPases NIAKO_RS11680 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS11680 SM00448 cheY-homologous receiver domain NIAKO_RS11695 SM00812 Alpha-L-fucosidase NIAKO_RS11715 SM00812 Alpha-L-fucosidase NIAKO_RS11760 SM00758 NIAKO_RS11760 NIAKO_RS11775 SM01217 NIAKO_RS11775 NIAKO_RS11785 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS11785 SM00387 Histidine kinase-like ATPases NIAKO_RS11785 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS11785 SM00448 cheY-homologous receiver domain NIAKO_RS11790 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS11795 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS11805 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS11845 SM00965 Secretin and TonB N terminus short domain NIAKO_RS11880 SM00448 cheY-homologous receiver domain NIAKO_RS11880 SM00850 LytTr DNA-binding domain NIAKO_RS11920 SM00633 Glycosyl hydrolase family 10 NIAKO_RS11955 SM00812 Alpha-L-fucosidase NIAKO_RS11995 SM00606 Cellulose Binding Domain Type IV NIAKO_RS12040 SM00813 Alpha-L-arabinofuranosidase C-terminus NIAKO_RS12050 SM00758 NIAKO_RS12050 NIAKO_RS12050 SM01217 NIAKO_RS12050 NIAKO_RS12055 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS12055 SM00387 Histidine kinase-like ATPases NIAKO_RS12055 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS12055 SM00448 cheY-homologous receiver domain NIAKO_RS12060 SM00633 Glycosyl hydrolase family 10 NIAKO_RS12070 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins NIAKO_RS12095 SM00862 Transcriptional regulatory protein, C terminal NIAKO_RS12125 SM00448 cheY-homologous receiver domain NIAKO_RS12125 SM00850 LytTr DNA-binding domain NIAKO_RS12145 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins NIAKO_RS12155 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor NIAKO_RS12185 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS12190 SM00829 Enoylreductase NIAKO_RS12270 SM00060 Fibronectin type 3 domain NIAKO_RS12280 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS12295 SM00091 PAS domain NIAKO_RS12295 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS12325 SM00861 Transketolase, pyrimidine binding domain NIAKO_RS12330 SM00100 Cyclic nucleotide-monophosphate binding domain NIAKO_RS12405 SM00100 Cyclic nucleotide-monophosphate binding domain NIAKO_RS12415 SM00354 helix_turn _helix lactose operon repressor NIAKO_RS12430 SM00257 Lysin motif NIAKO_RS12590 SM00838 Elongation factor G C-terminus NIAKO_RS12625 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain NIAKO_RS12630 SM01065 Starch binding domain NIAKO_RS12665 SM01001 AIR carboxylase NIAKO_RS12700 SM00729 Elongator protein 3, MiaB family, Radical SAM NIAKO_RS12710 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS12710 SM00962 SRP54-type protein, GTPase domain NIAKO_RS12710 SM00963 SRP54-type protein, helical bundle domain NIAKO_RS12750 SM00448 cheY-homologous receiver domain NIAKO_RS12750 SM00850 LytTr DNA-binding domain NIAKO_RS12825 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS12825 SM01086 C-terminal, D2-small domain, of ClpB protein NIAKO_RS12830 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins NIAKO_RS12915 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS12940 SM00838 Elongation factor G C-terminus NIAKO_RS12940 SM00889 Elongation factor G, domain IV NIAKO_RS12950 SM00400 zinc finger NIAKO_RS12950 SM00493 NIAKO_RS12950 NIAKO_RS12970 SM01207 NIAKO_RS12970 NIAKO_RS12980 SM00316 Ribosomal protein S1-like RNA-binding domain NIAKO_RS12980 SM00322 K homology RNA-binding domain NIAKO_RS12985 SM01387 NIAKO_RS12985 NIAKO_RS13000 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS13045 SM01150 NIAKO_RS13045 NIAKO_RS13060 SM00633 Glycosyl hydrolase family 10 NIAKO_RS13120 SM00849 Metallo-beta-lactamase superfamily NIAKO_RS13190 SM01217 NIAKO_RS13190 NIAKO_RS13205 SM00917 LeuA allosteric (dimerisation) domain NIAKO_RS13215 SM01329 NIAKO_RS13215 NIAKO_RS13235 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain NIAKO_RS13250 SM00220 Serine/Threonine protein kinases, catalytic domain NIAKO_RS13250 SM01260 NIAKO_RS13250 NIAKO_RS13265 SM00156 Protein phosphatase 2A homologues, catalytic domain. NIAKO_RS13300 SM00965 Secretin and TonB N terminus short domain NIAKO_RS13360 SM00530 Helix-turn-helix XRE-family like proteins NIAKO_RS13365 SM00014 Acid phosphatase homologues NIAKO_RS13385 SM00014 Acid phosphatase homologues NIAKO_RS13435 SM00448 cheY-homologous receiver domain NIAKO_RS13440 SM00091 PAS domain NIAKO_RS13440 SM00387 Histidine kinase-like ATPases NIAKO_RS13440 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS13440 SM00448 cheY-homologous receiver domain NIAKO_RS13450 SM00138 Methyltransferase, chemotaxis proteins NIAKO_RS13455 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. NIAKO_RS13455 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NIAKO_RS13455 SM00387 Histidine kinase-like ATPases NIAKO_RS13455 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS13455 SM00448 cheY-homologous receiver domain NIAKO_RS13470 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS13470 SM00387 Histidine kinase-like ATPases NIAKO_RS13470 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS13470 SM00448 cheY-homologous receiver domain NIAKO_RS13490 SM00448 cheY-homologous receiver domain NIAKO_RS13495 SM00387 Histidine kinase-like ATPases NIAKO_RS13495 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS13495 SM00448 cheY-homologous receiver domain NIAKO_RS13500 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. NIAKO_RS13500 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NIAKO_RS13500 SM00387 Histidine kinase-like ATPases NIAKO_RS13500 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS13500 SM00448 cheY-homologous receiver domain NIAKO_RS13505 SM00138 Methyltransferase, chemotaxis proteins NIAKO_RS13600 SM01006 Siderophore biosynthesis protein domain NIAKO_RS13670 SM00710 Parallel beta-helix repeats NIAKO_RS13680 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins NIAKO_RS13745 SM00028 Tetratricopeptide repeats NIAKO_RS13745 SM00421 helix_turn_helix, Lux Regulon NIAKO_RS13775 SM00850 LytTr DNA-binding domain NIAKO_RS13780 SM01235 NIAKO_RS13780 NIAKO_RS13790 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS13790 SM00387 Histidine kinase-like ATPases NIAKO_RS13790 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS13790 SM00448 cheY-homologous receiver domain NIAKO_RS13810 SM00849 Metallo-beta-lactamase superfamily NIAKO_RS13885 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS13915 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain NIAKO_RS13930 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain NIAKO_RS13945 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS13990 SM01217 NIAKO_RS13990 NIAKO_RS14025 SM00883 Chaperonin 10 Kd subunit NIAKO_RS14115 SM00758 NIAKO_RS14115 NIAKO_RS14170 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS14170 SM00448 cheY-homologous receiver domain NIAKO_RS14255 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS14325 SM00849 Metallo-beta-lactamase superfamily NIAKO_RS14345 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS14380 SM00487 DEAD-like helicases superfamily NIAKO_RS14380 SM00490 helicase superfamily c-terminal domain NIAKO_RS14385 SM00563 Phosphate acyltransferases NIAKO_RS14395 SM00729 Elongator protein 3, MiaB family, Radical SAM NIAKO_RS14400 SM00091 PAS domain NIAKO_RS14400 SM00448 cheY-homologous receiver domain NIAKO_RS14405 SM00448 cheY-homologous receiver domain NIAKO_RS14465 SM00758 NIAKO_RS14465 NIAKO_RS14495 SM00028 Tetratricopeptide repeats NIAKO_RS14500 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS14505 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS14570 SM00926 Molybdopterin oxidoreductase Fe4S4 domain NIAKO_RS14570 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NIAKO_RS14575 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region NIAKO_RS14600 SM00116 Domain in cystathionine beta-synthase and other proteins. NIAKO_RS14645 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS14680 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS14680 SM00387 Histidine kinase-like ATPases NIAKO_RS14680 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS14680 SM00448 cheY-homologous receiver domain NIAKO_RS14720 SM00465 GIY-YIG type nucleases (URI domain) NIAKO_RS14720 SM00479 NIAKO_RS14720 NIAKO_RS14730 SM00014 Acid phosphatase homologues NIAKO_RS14735 SM00014 Acid phosphatase homologues NIAKO_RS14750 SM00387 Histidine kinase-like ATPases NIAKO_RS14760 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) NIAKO_RS14760 SM00091 PAS domain NIAKO_RS14760 SM00387 Histidine kinase-like ATPases NIAKO_RS14760 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS14765 SM00448 cheY-homologous receiver domain NIAKO_RS14805 SM00448 cheY-homologous receiver domain NIAKO_RS14805 SM00850 LytTr DNA-binding domain NIAKO_RS14840 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins NIAKO_RS14910 SM00028 Tetratricopeptide repeats NIAKO_RS14925 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS14940 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS14965 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS15065 SM00421 helix_turn_helix, Lux Regulon NIAKO_RS15065 SM00448 cheY-homologous receiver domain NIAKO_RS15070 SM00387 Histidine kinase-like ATPases NIAKO_RS15080 SM00387 Histidine kinase-like ATPases NIAKO_RS15080 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS15080 SM00448 cheY-homologous receiver domain NIAKO_RS15090 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NIAKO_RS15195 SM00448 cheY-homologous receiver domain NIAKO_RS15195 SM00850 LytTr DNA-binding domain NIAKO_RS15205 SM00448 cheY-homologous receiver domain NIAKO_RS15205 SM00850 LytTr DNA-binding domain NIAKO_RS15310 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS15310 SM00387 Histidine kinase-like ATPases NIAKO_RS15310 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS15310 SM00448 cheY-homologous receiver domain NIAKO_RS15340 SM00642 Alpha-amylase domain NIAKO_RS15345 SM00642 Alpha-amylase domain NIAKO_RS15350 SM00642 Alpha-amylase domain NIAKO_RS15395 SM00448 cheY-homologous receiver domain NIAKO_RS15400 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) NIAKO_RS15400 SM00091 PAS domain NIAKO_RS15400 SM00387 Histidine kinase-like ATPases NIAKO_RS15400 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS15440 SM00354 helix_turn _helix lactose operon repressor NIAKO_RS15475 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS15495 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS15510 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS15520 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS15530 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS15530 SM00448 cheY-homologous receiver domain NIAKO_RS15535 SM00028 Tetratricopeptide repeats NIAKO_RS15535 SM00387 Histidine kinase-like ATPases NIAKO_RS15550 SM00849 Metallo-beta-lactamase superfamily NIAKO_RS15605 SM00360 RNA recognition motif NIAKO_RS15615 SM00357 Cold shock protein domain NIAKO_RS15620 SM00360 RNA recognition motif NIAKO_RS15625 SM00360 RNA recognition motif NIAKO_RS15630 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS15635 SM01248 NIAKO_RS15635 NIAKO_RS15640 SM01248 NIAKO_RS15640 NIAKO_RS15645 SM00091 PAS domain NIAKO_RS15645 SM00387 Histidine kinase-like ATPases NIAKO_RS15645 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS15650 SM00448 cheY-homologous receiver domain NIAKO_RS15655 SM00710 Parallel beta-helix repeats NIAKO_RS15675 SM00481 DNA polymerase alpha chain like domain NIAKO_RS15690 SM00642 Alpha-amylase domain NIAKO_RS15705 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. NIAKO_RS15705 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) NIAKO_RS15705 SM00091 PAS domain NIAKO_RS15705 SM00387 Histidine kinase-like ATPases NIAKO_RS15705 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS15750 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. NIAKO_RS15750 SM00245 tail specific protease NIAKO_RS15855 SM00060 Fibronectin type 3 domain NIAKO_RS15855 SM01067 Cellulose binding domain NIAKO_RS15860 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS15860 SM00387 Histidine kinase-like ATPases NIAKO_RS15860 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS15860 SM00448 cheY-homologous receiver domain NIAKO_RS15920 SM00421 helix_turn_helix, Lux Regulon NIAKO_RS15920 SM00448 cheY-homologous receiver domain NIAKO_RS16045 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS16055 SM00749 bacterial OsmY and nodulation domain NIAKO_RS16060 SM00871 Bacterial transcription activator, effector binding domain NIAKO_RS16090 SM00028 Tetratricopeptide repeats NIAKO_RS16090 SM00387 Histidine kinase-like ATPases NIAKO_RS16090 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS16150 SM00965 Secretin and TonB N terminus short domain NIAKO_RS16160 SM00421 helix_turn_helix, Lux Regulon NIAKO_RS16240 SM00530 Helix-turn-helix XRE-family like proteins NIAKO_RS16255 SM00387 Histidine kinase-like ATPases NIAKO_RS16315 SM00448 cheY-homologous receiver domain NIAKO_RS16385 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS16405 SM00345 helix_turn_helix gluconate operon transcriptional repressor NIAKO_RS16415 SM00849 Metallo-beta-lactamase superfamily NIAKO_RS16535 SM00421 helix_turn_helix, Lux Regulon NIAKO_RS16565 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS16575 SM01116 NIAKO_RS16575 NIAKO_RS16580 SM00947 Carbonic anhydrase NIAKO_RS16665 SM00530 Helix-turn-helix XRE-family like proteins NIAKO_RS16730 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS16760 SM00400 zinc finger NIAKO_RS16795 SM00857 Resolvase, N terminal domain NIAKO_RS16925 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor NIAKO_RS16980 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. NIAKO_RS17010 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS17015 SM00360 RNA recognition motif NIAKO_RS17030 SM00360 RNA recognition motif NIAKO_RS17035 SM00360 RNA recognition motif NIAKO_RS17055 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS17065 SM00448 cheY-homologous receiver domain NIAKO_RS17065 SM00850 LytTr DNA-binding domain NIAKO_RS17080 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor NIAKO_RS17145 SM00100 Cyclic nucleotide-monophosphate binding domain NIAKO_RS17145 SM00419 helix_turn_helix, cAMP Regulatory protein NIAKO_RS17170 SM00812 Alpha-L-fucosidase NIAKO_RS17175 SM00812 Alpha-L-fucosidase NIAKO_RS17200 SM00710 Parallel beta-helix repeats NIAKO_RS17235 SM00046 Diacylglycerol kinase catalytic domain (presumed) NIAKO_RS17240 SM00100 Cyclic nucleotide-monophosphate binding domain NIAKO_RS17240 SM00448 cheY-homologous receiver domain NIAKO_RS17275 SM00855 Phosphoglycerate mutase family NIAKO_RS17305 SM00420 helix_turn_helix, Deoxyribose operon repressor NIAKO_RS17305 SM01134 NIAKO_RS17305 NIAKO_RS17325 SM00822 NIAKO_RS17325 NIAKO_RS17345 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) NIAKO_RS17345 SM00091 PAS domain NIAKO_RS17415 SM00098 Alkaline phosphatase homologues NIAKO_RS17455 SM00965 Secretin and TonB N terminus short domain NIAKO_RS17475 SM00487 DEAD-like helicases superfamily NIAKO_RS17475 SM00490 helicase superfamily c-terminal domain NIAKO_RS17480 SM00028 Tetratricopeptide repeats NIAKO_RS17495 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS17515 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NIAKO_RS17540 SM00831 Cation transporter/ATPase, N-terminus NIAKO_RS17580 SM00876 Biotin and Thiamin Synthesis associated domain NIAKO_RS17625 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS17715 SM01130 NIAKO_RS17715 NIAKO_RS17890 SM01007 Class II Aldolase and Adducin N-terminal domain NIAKO_RS17965 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. NIAKO_RS17965 SM00387 Histidine kinase-like ATPases NIAKO_RS17965 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS18000 SM01007 Class II Aldolase and Adducin N-terminal domain NIAKO_RS18010 SM00345 helix_turn_helix gluconate operon transcriptional repressor NIAKO_RS18020 SM00953 NIAKO_RS18020 NIAKO_RS18035 SM00155 Phospholipase D. Active site motifs. NIAKO_RS18050 SM01119 NIAKO_RS18050 NIAKO_RS18105 SM00729 Elongator protein 3, MiaB family, Radical SAM NIAKO_RS18105 SM00876 Biotin and Thiamin Synthesis associated domain NIAKO_RS18110 SM00448 cheY-homologous receiver domain NIAKO_RS18120 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS18120 SM00464 Found in ATP-dependent protease La (LON) NIAKO_RS18125 SM00712 DNA/RNA-binding repeats in PUR-alpha/beta/gamma and in hypothetical proteins from spirochetes and the Bacteroides-Cytophaga-Flexibacter bacteria. NIAKO_RS18130 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS18140 SM00642 Alpha-amylase domain NIAKO_RS18215 SM00347 helix_turn_helix multiple antibiotic resistance protein NIAKO_RS18270 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain NIAKO_RS18270 SM00437 Bacterial DNA topoisomerase I DNA-binding domain NIAKO_RS18270 SM00493 NIAKO_RS18270 NIAKO_RS18305 SM00245 tail specific protease NIAKO_RS18310 SM00245 tail specific protease NIAKO_RS18365 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS18370 SM00829 Enoylreductase NIAKO_RS18380 SM00642 Alpha-amylase domain NIAKO_RS18475 SM00812 Alpha-L-fucosidase NIAKO_RS18510 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain NIAKO_RS18525 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS18565 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain NIAKO_RS18620 SM01130 NIAKO_RS18620 NIAKO_RS18635 SM00345 helix_turn_helix gluconate operon transcriptional repressor NIAKO_RS18635 SM00895 NIAKO_RS18635 NIAKO_RS18655 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS18660 SM01296 NIAKO_RS18660 NIAKO_RS18685 SM00028 Tetratricopeptide repeats NIAKO_RS18735 SM00642 Alpha-amylase domain NIAKO_RS18755 SM00642 Alpha-amylase domain NIAKO_RS18775 SM00788 Adenylosuccinate synthetase NIAKO_RS18840 SM00387 Histidine kinase-like ATPases NIAKO_RS18840 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS18865 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS18980 SM00448 cheY-homologous receiver domain NIAKO_RS18980 SM00862 Transcriptional regulatory protein, C terminal NIAKO_RS19080 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS19135 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS19170 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS19195 SM00420 helix_turn_helix, Deoxyribose operon repressor NIAKO_RS19195 SM01134 NIAKO_RS19195 NIAKO_RS19230 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS19245 SM00448 cheY-homologous receiver domain NIAKO_RS19275 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins NIAKO_RS19280 SM00710 Parallel beta-helix repeats NIAKO_RS19420 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain NIAKO_RS19440 SM00448 cheY-homologous receiver domain NIAKO_RS19445 SM00387 Histidine kinase-like ATPases NIAKO_RS19445 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS19445 SM00448 cheY-homologous receiver domain NIAKO_RS19450 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. NIAKO_RS19450 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NIAKO_RS19450 SM00387 Histidine kinase-like ATPases NIAKO_RS19450 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS19450 SM00448 cheY-homologous receiver domain NIAKO_RS19535 SM00530 Helix-turn-helix XRE-family like proteins NIAKO_RS19540 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain NIAKO_RS19590 SM00487 DEAD-like helicases superfamily NIAKO_RS19590 SM00490 helicase superfamily c-terminal domain NIAKO_RS19745 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS19760 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS19775 SM00749 bacterial OsmY and nodulation domain NIAKO_RS19785 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. NIAKO_RS19825 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS19840 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS19840 SM00448 cheY-homologous receiver domain NIAKO_RS19845 SM00091 PAS domain NIAKO_RS19845 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NIAKO_RS19845 SM00387 Histidine kinase-like ATPases NIAKO_RS19855 SM00028 Tetratricopeptide repeats NIAKO_RS19870 SM00448 cheY-homologous receiver domain NIAKO_RS19870 SM00850 LytTr DNA-binding domain NIAKO_RS19920 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS20015 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS20025 SM00850 LytTr DNA-binding domain NIAKO_RS20030 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor NIAKO_RS20055 SM00014 Acid phosphatase homologues NIAKO_RS20110 SM00316 Ribosomal protein S1-like RNA-binding domain NIAKO_RS20165 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS20180 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS20210 SM00965 Secretin and TonB N terminus short domain NIAKO_RS20270 SM00091 PAS domain NIAKO_RS20270 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NIAKO_RS20270 SM00387 Histidine kinase-like ATPases NIAKO_RS20270 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS20310 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS20310 SM00448 cheY-homologous receiver domain NIAKO_RS20320 SM00977 TilS substrate C-terminal domain NIAKO_RS20330 SM00893 Electron transfer flavoprotein domain NIAKO_RS20335 SM00893 Electron transfer flavoprotein domain NIAKO_RS20445 SM00448 cheY-homologous receiver domain NIAKO_RS20465 SM00448 cheY-homologous receiver domain NIAKO_RS20540 SM00344 helix_turn_helix ASNC type NIAKO_RS20570 SM00421 helix_turn_helix, Lux Regulon NIAKO_RS20605 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. NIAKO_RS20630 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS20650 SM00448 cheY-homologous receiver domain NIAKO_RS20650 SM00862 Transcriptional regulatory protein, C terminal NIAKO_RS20665 SM00642 Alpha-amylase domain NIAKO_RS20675 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. NIAKO_RS20710 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS20715 SM00448 cheY-homologous receiver domain NIAKO_RS20715 SM00862 Transcriptional regulatory protein, C terminal NIAKO_RS20730 SM00448 cheY-homologous receiver domain NIAKO_RS20730 SM00850 LytTr DNA-binding domain NIAKO_RS20740 SM00448 cheY-homologous receiver domain NIAKO_RS20740 SM00850 LytTr DNA-binding domain NIAKO_RS20785 SM00014 Acid phosphatase homologues NIAKO_RS20800 SM00861 Transketolase, pyrimidine binding domain NIAKO_RS20805 SM00986 Uracil DNA glycosylase superfamily NIAKO_RS20805 SM00987 UreE urease accessory protein, C-terminal domain NIAKO_RS20825 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS20840 SM00965 Secretin and TonB N terminus short domain NIAKO_RS20870 SM00867 YceI-like domain NIAKO_RS20930 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS20955 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS20980 SM00829 Enoylreductase NIAKO_RS20985 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS20995 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen NIAKO_RS21035 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS21055 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS21060 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS21065 SM00387 Histidine kinase-like ATPases NIAKO_RS21075 SM00387 Histidine kinase-like ATPases NIAKO_RS21085 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS21105 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS21235 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS21255 SM00729 Elongator protein 3, MiaB family, Radical SAM NIAKO_RS21270 SM00729 Elongator protein 3, MiaB family, Radical SAM NIAKO_RS21280 SM00729 Elongator protein 3, MiaB family, Radical SAM NIAKO_RS21350 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS21410 SM00529 Helix-turn-helix diphteria tox regulatory element NIAKO_RS21410 SM00899 NIAKO_RS21410 NIAKO_RS21430 SM01329 NIAKO_RS21430 NIAKO_RS21520 SM00091 PAS domain NIAKO_RS21520 SM00387 Histidine kinase-like ATPases NIAKO_RS21565 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS21590 SM00965 Secretin and TonB N terminus short domain NIAKO_RS21630 SM00028 Tetratricopeptide repeats NIAKO_RS21650 SM00852 Probable molybdopterin binding domain NIAKO_RS21680 SM00479 NIAKO_RS21680 NIAKO_RS21725 SM00363 S4 RNA-binding domain NIAKO_RS21740 SM00732 Likely ribonuclease with RNase H fold. NIAKO_RS21755 SM00533 DNA-binding domain of DNA mismatch repair MUTS family NIAKO_RS21755 SM00534 ATPase domain of DNA mismatch repair MUTS family NIAKO_RS21795 SM00014 Acid phosphatase homologues NIAKO_RS21800 SM00116 Domain in cystathionine beta-synthase and other proteins. NIAKO_RS21800 SM01091 Transporter associated domain NIAKO_RS21840 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain NIAKO_RS21850 SM00662 RNA polymerases D NIAKO_RS21855 SM00363 S4 RNA-binding domain NIAKO_RS21855 SM01390 NIAKO_RS21855 NIAKO_RS21915 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS21920 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS21955 SM00636 NIAKO_RS21955 NIAKO_RS21965 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins NIAKO_RS21980 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS22105 SM01321 NIAKO_RS22105 NIAKO_RS22110 SM00830 Chorismate mutase type II NIAKO_RS22115 SM00487 DEAD-like helicases superfamily NIAKO_RS22115 SM00490 helicase superfamily c-terminal domain NIAKO_RS22155 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. NIAKO_RS22155 SM00245 tail specific protease NIAKO_RS22180 SM00316 Ribosomal protein S1-like RNA-binding domain NIAKO_RS22180 SM00732 Likely ribonuclease with RNase H fold. NIAKO_RS22190 SM00116 Domain in cystathionine beta-synthase and other proteins. NIAKO_RS22220 SM01133 NIAKO_RS22220 NIAKO_RS22275 SM00843 NIAKO_RS22275 NIAKO_RS22280 SM00387 Histidine kinase-like ATPases NIAKO_RS22350 SM00710 Parallel beta-helix repeats NIAKO_RS22355 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family NIAKO_RS22435 SM00244 prohibitin homologues NIAKO_RS22485 SM00257 Lysin motif NIAKO_RS22515 SM01002 Alanine dehydrogenase/PNT, C-terminal domain NIAKO_RS22515 SM01003 Alanine dehydrogenase/PNT, N-terminal domain NIAKO_RS22590 SM00710 Parallel beta-helix repeats NIAKO_RS22600 SM00448 cheY-homologous receiver domain NIAKO_RS22610 SM00481 DNA polymerase alpha chain like domain NIAKO_RS22695 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS22725 SM00671 Sel1-like repeats. NIAKO_RS22830 SM00487 DEAD-like helicases superfamily NIAKO_RS22855 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain NIAKO_RS22865 SM00563 Phosphate acyltransferases NIAKO_RS22880 SM00316 Ribosomal protein S1-like RNA-binding domain NIAKO_RS22950 SM01374 NIAKO_RS22950 NIAKO_RS22970 SM00322 K homology RNA-binding domain NIAKO_RS22985 SM01382 NIAKO_RS22985 NIAKO_RS22985 SM01383 NIAKO_RS22985 NIAKO_RS23010 SM01403 NIAKO_RS23010 NIAKO_RS23040 SM00838 Elongation factor G C-terminus NIAKO_RS23040 SM00889 Elongation factor G, domain IV NIAKO_RS23110 SM00028 Tetratricopeptide repeats NIAKO_RS23170 SM01230 NIAKO_RS23170 NIAKO_RS23210 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS23210 SM01086 C-terminal, D2-small domain, of ClpB protein NIAKO_RS23270 SM00448 cheY-homologous receiver domain NIAKO_RS23270 SM00850 LytTr DNA-binding domain NIAKO_RS23315 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS23335 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS23345 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS23350 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS23430 SM00448 cheY-homologous receiver domain NIAKO_RS23430 SM00850 LytTr DNA-binding domain NIAKO_RS23465 SM00327 von Willebrand factor (vWF) type A domain NIAKO_RS23525 SM00477 DNA/RNA non-specific endonuclease NIAKO_RS23525 SM00892 DNA/RNA non-specific endonuclease NIAKO_RS23535 SM00448 cheY-homologous receiver domain NIAKO_RS23555 SM00479 NIAKO_RS23555 NIAKO_RS23575 SM00331 Sigma factor PP2C-like phosphatases NIAKO_RS23575 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain NIAKO_RS23590 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS23645 SM00487 DEAD-like helicases superfamily NIAKO_RS23645 SM00490 helicase superfamily c-terminal domain NIAKO_RS23655 SM00487 DEAD-like helicases superfamily NIAKO_RS23655 SM00490 helicase superfamily c-terminal domain NIAKO_RS23680 SM00487 DEAD-like helicases superfamily NIAKO_RS23735 SM00448 cheY-homologous receiver domain NIAKO_RS23740 SM00448 cheY-homologous receiver domain NIAKO_RS23750 SM00226 Low molecular weight phosphatase family NIAKO_RS23770 SM00387 Histidine kinase-like ATPases NIAKO_RS23770 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS23775 SM00448 cheY-homologous receiver domain NIAKO_RS23775 SM00862 Transcriptional regulatory protein, C terminal NIAKO_RS23810 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS23845 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS23870 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS23900 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS23910 SM00345 helix_turn_helix gluconate operon transcriptional repressor NIAKO_RS23920 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS24065 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS24070 SM00822 NIAKO_RS24070 NIAKO_RS24130 SM01130 NIAKO_RS24130 NIAKO_RS24155 SM00935 Outer membrane protein (OmpH-like) NIAKO_RS24160 SM00663 RNA polymerase I subunit A N-terminus NIAKO_RS24180 SM00354 helix_turn _helix lactose operon repressor NIAKO_RS24200 SM00649 Ribosomal protein L11/L12 NIAKO_RS24215 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. NIAKO_RS24215 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. NIAKO_RS24390 SM00758 NIAKO_RS24390 NIAKO_RS24390 SM01225 NIAKO_RS24390 NIAKO_RS24400 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS24405 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS24445 SM00965 Secretin and TonB N terminus short domain NIAKO_RS24525 SM00387 Histidine kinase-like ATPases NIAKO_RS24525 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS24530 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS24530 SM00448 cheY-homologous receiver domain NIAKO_RS24545 SM01149 NIAKO_RS24545 NIAKO_RS24615 SM00091 PAS domain NIAKO_RS24615 SM00387 Histidine kinase-like ATPases NIAKO_RS24690 SM00984 UDP binding domain NIAKO_RS24730 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NIAKO_RS24760 SM00861 Transketolase, pyrimidine binding domain NIAKO_RS24795 SM00631 NIAKO_RS24795 NIAKO_RS24855 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS24860 SM01359 NIAKO_RS24860 NIAKO_RS24860 SM01360 NIAKO_RS24860 NIAKO_RS24910 SM00487 DEAD-like helicases superfamily NIAKO_RS24910 SM00490 helicase superfamily c-terminal domain NIAKO_RS24915 SM00421 helix_turn_helix, Lux Regulon NIAKO_RS24915 SM00448 cheY-homologous receiver domain NIAKO_RS24965 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. NIAKO_RS24970 SM00245 tail specific protease NIAKO_RS24990 SM00278 Helix-hairpin-helix DNA-binding motif class 1 NIAKO_RS25010 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins NIAKO_RS25025 SM00116 Domain in cystathionine beta-synthase and other proteins. NIAKO_RS25025 SM01240 NIAKO_RS25025 NIAKO_RS25030 SM00530 Helix-turn-helix XRE-family like proteins NIAKO_RS25050 SM01235 NIAKO_RS25050 NIAKO_RS25055 SM00421 helix_turn_helix, Lux Regulon NIAKO_RS25055 SM00448 cheY-homologous receiver domain NIAKO_RS25070 SM00387 Histidine kinase-like ATPases NIAKO_RS25075 SM00421 helix_turn_helix, Lux Regulon NIAKO_RS25075 SM00448 cheY-homologous receiver domain NIAKO_RS25085 SM00882 Coenzyme A transferase NIAKO_RS25090 SM00882 Coenzyme A transferase NIAKO_RS25110 SM01409 NIAKO_RS25110 NIAKO_RS25190 SM00360 RNA recognition motif NIAKO_RS25300 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NIAKO_RS25340 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS25350 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NIAKO_RS25360 SM01092 CO dehydrogenase flavoprotein C-terminal domain NIAKO_RS25380 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS25400 SM00235 Zinc-dependent metalloprotease NIAKO_RS25440 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins NIAKO_RS25485 SM00448 cheY-homologous receiver domain NIAKO_RS25515 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS25550 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS25655 SM00822 NIAKO_RS25655 NIAKO_RS25685 SM00710 Parallel beta-helix repeats NIAKO_RS25690 SM00345 helix_turn_helix gluconate operon transcriptional repressor NIAKO_RS25690 SM00895 NIAKO_RS25690 NIAKO_RS25780 SM00354 helix_turn _helix lactose operon repressor NIAKO_RS25795 SM00354 helix_turn _helix lactose operon repressor NIAKO_RS25835 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain NIAKO_RS25855 SM01130 NIAKO_RS25855 NIAKO_RS25860 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS25865 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins NIAKO_RS25890 SM00448 cheY-homologous receiver domain NIAKO_RS25890 SM00850 LytTr DNA-binding domain NIAKO_RS25895 SM00849 Metallo-beta-lactamase superfamily NIAKO_RS25895 SM01027 Beta-Casp domain NIAKO_RS25960 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS25965 SM00710 Parallel beta-helix repeats NIAKO_RS25985 SM00100 Cyclic nucleotide-monophosphate binding domain NIAKO_RS25985 SM00419 helix_turn_helix, cAMP Regulatory protein NIAKO_RS26025 SM00858 NIAKO_RS26025 NIAKO_RS26040 SM00710 Parallel beta-helix repeats NIAKO_RS26050 SM00965 Secretin and TonB N terminus short domain NIAKO_RS26110 SM00354 helix_turn _helix lactose operon repressor NIAKO_RS26115 SM01134 NIAKO_RS26115 NIAKO_RS26120 SM00345 helix_turn_helix gluconate operon transcriptional repressor NIAKO_RS26140 SM00926 Molybdopterin oxidoreductase Fe4S4 domain NIAKO_RS26165 SM00100 Cyclic nucleotide-monophosphate binding domain NIAKO_RS26165 SM00419 helix_turn_helix, cAMP Regulatory protein NIAKO_RS26190 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins NIAKO_RS26190 SM00758 NIAKO_RS26190 NIAKO_RS26320 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS26340 SM00984 UDP binding domain NIAKO_RS26355 SM00354 helix_turn _helix lactose operon repressor NIAKO_RS26370 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS26385 SM00812 Alpha-L-fucosidase NIAKO_RS26395 SM00812 Alpha-L-fucosidase NIAKO_RS26450 SM01118 NIAKO_RS26450 NIAKO_RS26460 SM00028 Tetratricopeptide repeats NIAKO_RS26510 SM00710 Parallel beta-helix repeats NIAKO_RS26570 SM01011 Aminopeptidase P, N-terminal domain NIAKO_RS26645 SM00530 Helix-turn-helix XRE-family like proteins NIAKO_RS26650 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain NIAKO_RS26655 SM00530 Helix-turn-helix XRE-family like proteins NIAKO_RS26700 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS26700 SM00487 DEAD-like helicases superfamily NIAKO_RS26770 SM00028 Tetratricopeptide repeats NIAKO_RS26795 SM00448 cheY-homologous receiver domain NIAKO_RS26795 SM00850 LytTr DNA-binding domain NIAKO_RS26865 SM00421 helix_turn_helix, Lux Regulon NIAKO_RS26865 SM00448 cheY-homologous receiver domain NIAKO_RS26900 SM01011 Aminopeptidase P, N-terminal domain NIAKO_RS26930 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS26940 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS26960 SM00028 Tetratricopeptide repeats NIAKO_RS27015 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins NIAKO_RS27050 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase NIAKO_RS27075 SM00271 DnaJ molecular chaperone homology domain NIAKO_RS27080 SM00327 von Willebrand factor (vWF) type A domain NIAKO_RS27115 SM00448 cheY-homologous receiver domain NIAKO_RS27130 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS27165 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS27185 SM00564 beta-propeller repeat NIAKO_RS27290 SM00028 Tetratricopeptide repeats NIAKO_RS27295 SM00448 cheY-homologous receiver domain NIAKO_RS27295 SM00850 LytTr DNA-binding domain NIAKO_RS27310 SM00534 ATPase domain of DNA mismatch repair MUTS family NIAKO_RS27320 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS27355 SM00861 Transketolase, pyrimidine binding domain NIAKO_RS27405 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS27450 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS27470 SM00028 Tetratricopeptide repeats NIAKO_RS27470 SM00387 Histidine kinase-like ATPases NIAKO_RS27470 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS27480 SM00421 helix_turn_helix, Lux Regulon NIAKO_RS27480 SM00448 cheY-homologous receiver domain NIAKO_RS27515 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS27525 SM00873 B3/4 domain NIAKO_RS27525 SM00874 tRNA synthetase B5 domain NIAKO_RS27525 SM00896 Ferredoxin-fold anticodon binding domain NIAKO_RS27545 SM00322 K homology RNA-binding domain NIAKO_RS27545 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. NIAKO_RS27580 SM00788 Adenylosuccinate synthetase NIAKO_RS27585 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. NIAKO_RS27585 SM00954 Region found in RelA / SpoT proteins NIAKO_RS27610 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor NIAKO_RS27655 SM00028 Tetratricopeptide repeats NIAKO_RS27715 SM00354 helix_turn _helix lactose operon repressor NIAKO_RS27730 SM01005 Alanine racemase, C-terminal domain NIAKO_RS27765 SM00347 helix_turn_helix multiple antibiotic resistance protein NIAKO_RS27775 SM00358 Double-stranded RNA binding motif NIAKO_RS27775 SM00535 Ribonuclease III family NIAKO_RS27780 SM00825 Beta-ketoacyl synthase NIAKO_RS27795 SM00487 DEAD-like helicases superfamily NIAKO_RS27795 SM00490 helicase superfamily c-terminal domain NIAKO_RS27795 SM00982 NIAKO_RS27795 NIAKO_RS27795 SM01058 CarD-like/TRCF domain NIAKO_RS27855 SM00849 Metallo-beta-lactamase superfamily NIAKO_RS27885 SM00729 Elongator protein 3, MiaB family, Radical SAM NIAKO_RS27940 SM00327 von Willebrand factor (vWF) type A domain NIAKO_RS28055 SM00448 cheY-homologous receiver domain NIAKO_RS28055 SM00850 LytTr DNA-binding domain NIAKO_RS28065 SM00861 Transketolase, pyrimidine binding domain NIAKO_RS28130 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS28190 SM01004 Delta-aminolevulinic acid dehydratase NIAKO_RS28210 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS28220 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain NIAKO_RS28230 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. NIAKO_RS28235 SM00845 GatB domain NIAKO_RS28290 SM00937 NIAKO_RS28290 NIAKO_RS28355 SM00387 Histidine kinase-like ATPases NIAKO_RS28355 SM00433 TopoisomeraseII NIAKO_RS28395 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS28450 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain NIAKO_RS28450 SM01209 NIAKO_RS28450 NIAKO_RS28455 SM00421 helix_turn_helix, Lux Regulon NIAKO_RS28455 SM00448 cheY-homologous receiver domain NIAKO_RS28460 SM00387 Histidine kinase-like ATPases NIAKO_RS28480 SM00798 AICARFT/IMPCHase bienzyme NIAKO_RS28480 SM00851 MGS-like domain NIAKO_RS28505 SM01091 Transporter associated domain NIAKO_RS28515 SM00478 endonuclease III NIAKO_RS28520 SM00411 bacterial (prokaryotic) histone like domain NIAKO_RS28540 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS28625 SM00028 Tetratricopeptide repeats NIAKO_RS28625 SM00386 HAT (Half-A-TPR) repeats NIAKO_RS28660 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NIAKO_RS28660 SM00387 Histidine kinase-like ATPases NIAKO_RS28660 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS28665 SM00448 cheY-homologous receiver domain NIAKO_RS28665 SM00862 Transcriptional regulatory protein, C terminal NIAKO_RS28670 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NIAKO_RS28675 SM00448 cheY-homologous receiver domain NIAKO_RS28695 SM00448 cheY-homologous receiver domain NIAKO_RS28720 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS28720 SM00448 cheY-homologous receiver domain NIAKO_RS28725 SM00387 Histidine kinase-like ATPases NIAKO_RS28725 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS28730 SM00091 PAS domain NIAKO_RS28730 SM00387 Histidine kinase-like ATPases NIAKO_RS28730 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS28730 SM00448 cheY-homologous receiver domain NIAKO_RS28805 SM00191 Integrin alpha (beta-propellor repeats). NIAKO_RS28850 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS28895 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NIAKO_RS28990 SM00327 von Willebrand factor (vWF) type A domain NIAKO_RS29030 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS29100 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS29110 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor NIAKO_RS29115 SM00151 SWI complex, BAF60b domains NIAKO_RS29160 SM00448 cheY-homologous receiver domain NIAKO_RS29175 SM00878 Biotin carboxylase C-terminal domain NIAKO_RS29285 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS29290 SM00245 tail specific protease NIAKO_RS29310 SM01324 NIAKO_RS29310 NIAKO_RS29325 SM00448 cheY-homologous receiver domain NIAKO_RS29325 SM00850 LytTr DNA-binding domain NIAKO_RS29335 SM00100 Cyclic nucleotide-monophosphate binding domain NIAKO_RS29335 SM00419 helix_turn_helix, cAMP Regulatory protein NIAKO_RS29340 SM00116 Domain in cystathionine beta-synthase and other proteins. NIAKO_RS29345 SM00710 Parallel beta-helix repeats NIAKO_RS29360 SM00448 cheY-homologous receiver domain NIAKO_RS29365 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) NIAKO_RS29365 SM00091 PAS domain NIAKO_RS29365 SM00138 Methyltransferase, chemotaxis proteins NIAKO_RS29365 SM00387 Histidine kinase-like ATPases NIAKO_RS29365 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS29370 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. NIAKO_RS29380 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS29395 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS29420 SM00368 Leucine rich repeat, ribonuclease inhibitor type NIAKO_RS29610 SM00387 Histidine kinase-like ATPases NIAKO_RS29610 SM00448 cheY-homologous receiver domain NIAKO_RS29615 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS29615 SM00448 cheY-homologous receiver domain NIAKO_RS29630 SM00493 NIAKO_RS29630 NIAKO_RS29640 SM01018 B12 binding domain NIAKO_RS29665 SM00411 bacterial (prokaryotic) histone like domain NIAKO_RS29710 SM00327 von Willebrand factor (vWF) type A domain NIAKO_RS29745 SM00191 Integrin alpha (beta-propellor repeats). NIAKO_RS29765 SM00292 breast cancer carboxy-terminal domain NIAKO_RS29765 SM00532 Ligase N family NIAKO_RS29780 SM00859 Semialdehyde dehydrogenase, NAD binding domain NIAKO_RS29860 SM00478 endonuclease III NIAKO_RS29870 SM00840 NIAKO_RS29870 NIAKO_RS29885 SM01160 NIAKO_RS29885 NIAKO_RS29905 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. NIAKO_RS29930 SM00478 endonuclease III NIAKO_RS29940 SM00822 NIAKO_RS29940 NIAKO_RS29950 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS29990 SM00855 Phosphoglycerate mutase family NIAKO_RS29995 SM00421 helix_turn_helix, Lux Regulon NIAKO_RS29995 SM00448 cheY-homologous receiver domain NIAKO_RS30005 SM00421 helix_turn_helix, Lux Regulon NIAKO_RS30005 SM00448 cheY-homologous receiver domain NIAKO_RS30010 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. NIAKO_RS30010 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) NIAKO_RS30010 SM00091 PAS domain NIAKO_RS30025 SM00322 K homology RNA-binding domain NIAKO_RS30045 SM01217 NIAKO_RS30045 NIAKO_RS30065 SM00965 Secretin and TonB N terminus short domain NIAKO_RS30195 SM00530 Helix-turn-helix XRE-family like proteins NIAKO_RS30200 SM00857 Resolvase, N terminal domain NIAKO_RS30245 SM00530 Helix-turn-helix XRE-family like proteins NIAKO_RS30390 SM00421 helix_turn_helix, Lux Regulon NIAKO_RS30415 SM00530 Helix-turn-helix XRE-family like proteins NIAKO_RS30475 SM00897 FIST N domain NIAKO_RS30475 SM01204 NIAKO_RS30475 NIAKO_RS30480 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) NIAKO_RS30480 SM00091 PAS domain NIAKO_RS30480 SM00387 Histidine kinase-like ATPases NIAKO_RS30480 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS30480 SM00448 cheY-homologous receiver domain NIAKO_RS30600 SM00448 cheY-homologous receiver domain NIAKO_RS30600 SM00850 LytTr DNA-binding domain NIAKO_RS30625 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS30650 SM00448 cheY-homologous receiver domain NIAKO_RS30655 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins NIAKO_RS30720 SM00347 helix_turn_helix multiple antibiotic resistance protein NIAKO_RS30735 SM00641 Glycosyl hydrolases family 25 NIAKO_RS30750 SM00244 prohibitin homologues NIAKO_RS30870 SM00448 cheY-homologous receiver domain NIAKO_RS30870 SM00850 LytTr DNA-binding domain NIAKO_RS30900 SM00014 Acid phosphatase homologues NIAKO_RS30915 SM00387 Histidine kinase-like ATPases NIAKO_RS30915 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS30915 SM00448 cheY-homologous receiver domain NIAKO_RS30930 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS30940 SM00851 MGS-like domain NIAKO_RS30945 SM00487 DEAD-like helicases superfamily NIAKO_RS30945 SM00490 helicase superfamily c-terminal domain NIAKO_RS30950 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs NIAKO_RS30950 SM00474 3'-5' exonuclease NIAKO_RS30950 SM00475 5'-3' exonuclease NIAKO_RS30950 SM00482 DNA polymerase A domain NIAKO_RS31000 SM00448 cheY-homologous receiver domain NIAKO_RS31000 SM00850 LytTr DNA-binding domain NIAKO_RS31040 SM00932 Scaffold protein Nfu/NifU N terminal NIAKO_RS31115 SM00245 tail specific protease NIAKO_RS31155 SM00244 prohibitin homologues NIAKO_RS31180 SM00899 NIAKO_RS31180 NIAKO_RS31195 SM01228 NIAKO_RS31195 NIAKO_RS31205 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. NIAKO_RS31260 SM00640 Glycosyl hydrolases family 32 NIAKO_RS31295 SM00460 Transglutaminase/protease-like homologues NIAKO_RS31305 SM00480 DNA polymerase III beta subunit NIAKO_RS31325 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) NIAKO_RS31325 SM00091 PAS domain NIAKO_RS31325 SM00387 Histidine kinase-like ATPases NIAKO_RS31325 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS31330 SM00448 cheY-homologous receiver domain NIAKO_RS31370 SM00344 helix_turn_helix ASNC type NIAKO_RS31405 SM00704 CDGSH-type zinc finger. Function unknown. NIAKO_RS31410 SM00870 NIAKO_RS31410 NIAKO_RS31415 SM00448 cheY-homologous receiver domain NIAKO_RS31415 SM00862 Transcriptional regulatory protein, C terminal NIAKO_RS31420 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NIAKO_RS31420 SM00387 Histidine kinase-like ATPases NIAKO_RS31420 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS31435 SM00838 Elongation factor G C-terminus NIAKO_RS31435 SM00889 Elongation factor G, domain IV NIAKO_RS31450 SM00965 Secretin and TonB N terminus short domain NIAKO_RS31505 SM00860 SMI1 / KNR4 family NIAKO_RS31525 SM00341 Helicase and RNase D C-terminal NIAKO_RS31525 SM00487 DEAD-like helicases superfamily NIAKO_RS31525 SM00490 helicase superfamily c-terminal domain NIAKO_RS31525 SM00956 NIAKO_RS31525 NIAKO_RS31530 SM00116 Domain in cystathionine beta-synthase and other proteins. NIAKO_RS31645 SM00357 Cold shock protein domain NIAKO_RS31645 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS31645 SM00959 Rho termination factor, N-terminal domain NIAKO_RS31665 SM00487 DEAD-like helicases superfamily NIAKO_RS31665 SM00490 helicase superfamily c-terminal domain NIAKO_RS31685 SM00642 Alpha-amylase domain NIAKO_RS31705 SM00448 cheY-homologous receiver domain NIAKO_RS31705 SM00862 Transcriptional regulatory protein, C terminal NIAKO_RS31725 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. NIAKO_RS31745 SM00861 Transketolase, pyrimidine binding domain NIAKO_RS31755 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. NIAKO_RS31755 SM00245 tail specific protease NIAKO_RS31930 SM00344 helix_turn_helix ASNC type NIAKO_RS31955 SM00347 helix_turn_helix multiple antibiotic resistance protein NIAKO_RS31970 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. NIAKO_RS31975 SM00886 Stress responsive A/B Barrel Domain NIAKO_RS32005 SM01350 NIAKO_RS32005 NIAKO_RS32015 SM00360 RNA recognition motif NIAKO_RS32075 SM00419 helix_turn_helix, cAMP Regulatory protein NIAKO_RS32085 SM00450 Rhodanese Homology Domain NIAKO_RS32085 SM00849 Metallo-beta-lactamase superfamily NIAKO_RS32125 SM00046 Diacylglycerol kinase catalytic domain (presumed) NIAKO_RS32170 SM00838 Elongation factor G C-terminus NIAKO_RS32215 SM00464 Found in ATP-dependent protease La (LON) NIAKO_RS32275 SM00903 Flavin reductase like domain NIAKO_RS32380 SM01091 Transporter associated domain NIAKO_RS32385 SM00072 Guanylate kinase homologues. NIAKO_RS32420 SM00116 Domain in cystathionine beta-synthase and other proteins. NIAKO_RS32450 SM00935 Outer membrane protein (OmpH-like) NIAKO_RS32455 SM00935 Outer membrane protein (OmpH-like) NIAKO_RS32475 SM01234 NIAKO_RS32475 NIAKO_RS32595 SM00448 cheY-homologous receiver domain NIAKO_RS32595 SM00862 Transcriptional regulatory protein, C terminal NIAKO_RS32600 SM00387 Histidine kinase-like ATPases NIAKO_RS32600 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS32625 SM00448 cheY-homologous receiver domain NIAKO_RS32625 SM00850 LytTr DNA-binding domain NIAKO_RS32675 SM00853 MutL C terminal dimerisation domain NIAKO_RS32675 SM01340 NIAKO_RS32675 NIAKO_RS32705 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. NIAKO_RS32720 SM00478 endonuclease III NIAKO_RS32720 SM00525 NIAKO_RS32720 NIAKO_RS32735 SM01192 NIAKO_RS32735 NIAKO_RS32735 SM01193 NIAKO_RS32735 NIAKO_RS32745 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS32750 SM00947 Carbonic anhydrase NIAKO_RS32840 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor NIAKO_RS32845 SM00450 Rhodanese Homology Domain NIAKO_RS32845 SM00849 Metallo-beta-lactamase superfamily NIAKO_RS32850 SM00421 helix_turn_helix, Lux Regulon NIAKO_RS32850 SM00448 cheY-homologous receiver domain NIAKO_RS32895 SM00871 Bacterial transcription activator, effector binding domain NIAKO_RS32915 SM00028 Tetratricopeptide repeats NIAKO_RS32920 SM00327 von Willebrand factor (vWF) type A domain NIAKO_RS33010 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS33020 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain NIAKO_RS33020 SM01232 NIAKO_RS33020 NIAKO_RS33030 SM00487 DEAD-like helicases superfamily NIAKO_RS33030 SM00490 helicase superfamily c-terminal domain NIAKO_RS33050 SM00644 NIAKO_RS33050 NIAKO_RS33095 SM00729 Elongator protein 3, MiaB family, Radical SAM NIAKO_RS33115 SM00387 Histidine kinase-like ATPases NIAKO_RS33120 SM00421 helix_turn_helix, Lux Regulon NIAKO_RS33120 SM00448 cheY-homologous receiver domain NIAKO_RS33155 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS33170 SM00244 prohibitin homologues NIAKO_RS33200 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. NIAKO_RS33230 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS33345 SM00822 NIAKO_RS33345 NIAKO_RS33410 SM00422 helix_turn_helix, mercury resistance NIAKO_RS33425 SM00530 Helix-turn-helix XRE-family like proteins NIAKO_RS33475 SM00448 cheY-homologous receiver domain NIAKO_RS33475 SM00850 LytTr DNA-binding domain NIAKO_RS33495 SM00344 helix_turn_helix ASNC type NIAKO_RS33510 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS33520 SM00421 helix_turn_helix, Lux Regulon NIAKO_RS33525 SM00606 Cellulose Binding Domain Type IV NIAKO_RS33545 SM00758 NIAKO_RS33545 NIAKO_RS33545 SM01217 NIAKO_RS33545 NIAKO_RS33560 SM00867 YceI-like domain NIAKO_RS33650 SM00855 Phosphoglycerate mutase family NIAKO_RS33720 SM00729 Elongator protein 3, MiaB family, Radical SAM NIAKO_RS33765 SM00465 GIY-YIG type nucleases (URI domain) NIAKO_RS33815 SM01329 NIAKO_RS33815 NIAKO_RS33830 SM01209 NIAKO_RS33830 NIAKO_RS33830 SM01210 NIAKO_RS33830 NIAKO_RS33840 SM00268 Actin NIAKO_RS33865 SM00849 Metallo-beta-lactamase superfamily NIAKO_RS33895 SM00861 Transketolase, pyrimidine binding domain NIAKO_RS33960 SM00387 Histidine kinase-like ATPases NIAKO_RS33960 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS33965 SM00448 cheY-homologous receiver domain NIAKO_RS33965 SM00862 Transcriptional regulatory protein, C terminal NIAKO_RS33980 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS34060 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS34105 SM00650 Ribosomal RNA adenine dimethylases NIAKO_RS34140 SM00849 Metallo-beta-lactamase superfamily NIAKO_RS34200 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS34205 SM00448 cheY-homologous receiver domain NIAKO_RS34205 SM00862 Transcriptional regulatory protein, C terminal NIAKO_RS34210 SM00883 Chaperonin 10 Kd subunit NIAKO_RS34225 SM00487 DEAD-like helicases superfamily NIAKO_RS34225 SM00490 helicase superfamily c-terminal domain NIAKO_RS34240 SM01002 Alanine dehydrogenase/PNT, C-terminal domain NIAKO_RS34240 SM01003 Alanine dehydrogenase/PNT, N-terminal domain NIAKO_RS34255 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS34275 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. NIAKO_RS34280 SM00448 cheY-homologous receiver domain NIAKO_RS34290 SM00849 Metallo-beta-lactamase superfamily NIAKO_RS34295 SM00448 cheY-homologous receiver domain NIAKO_RS34300 SM00897 FIST N domain NIAKO_RS34320 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS34320 SM00994 ClpX C4-type zinc finger NIAKO_RS34320 SM01086 C-terminal, D2-small domain, of ClpB protein NIAKO_RS34415 SM00880 NIAKO_RS34415 NIAKO_RS34525 SM00448 cheY-homologous receiver domain NIAKO_RS34525 SM00850 LytTr DNA-binding domain NIAKO_RS34550 SM00422 helix_turn_helix, mercury resistance NIAKO_RS34595 SM00363 S4 RNA-binding domain NIAKO_RS34630 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS34630 SM00962 SRP54-type protein, GTPase domain NIAKO_RS34630 SM00963 SRP54-type protein, helical bundle domain NIAKO_RS34680 SM00363 S4 RNA-binding domain NIAKO_RS34690 SM00729 Elongator protein 3, MiaB family, Radical SAM NIAKO_RS34725 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS34740 SM00226 Low molecular weight phosphatase family NIAKO_RS34755 SM00028 Tetratricopeptide repeats NIAKO_RS34785 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region NIAKO_RS34790 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NIAKO_RS34875 SM01068 Putative carbohydrate binding domain NIAKO_RS34880 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS34880 SM00387 Histidine kinase-like ATPases NIAKO_RS34880 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS34880 SM00448 cheY-homologous receiver domain NIAKO_RS34890 SM00028 Tetratricopeptide repeats NIAKO_RS34940 SM00984 UDP binding domain NIAKO_RS35020 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS35045 SM01360 NIAKO_RS35045 NIAKO_RS35075 SM00746 metallochaperone-like domain NIAKO_RS35120 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS35130 SM00116 Domain in cystathionine beta-synthase and other proteins. NIAKO_RS35130 SM01091 Transporter associated domain NIAKO_RS35165 SM00965 Secretin and TonB N terminus short domain NIAKO_RS35315 SM00710 Parallel beta-helix repeats NIAKO_RS35350 SM00710 Parallel beta-helix repeats NIAKO_RS35440 SM00028 Tetratricopeptide repeats NIAKO_RS35450 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS35465 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS35560 SM00345 helix_turn_helix gluconate operon transcriptional repressor NIAKO_RS35575 SM00448 cheY-homologous receiver domain NIAKO_RS35575 SM00850 LytTr DNA-binding domain NIAKO_RS35595 SM00387 Histidine kinase-like ATPases NIAKO_RS35595 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS35600 SM00448 cheY-homologous receiver domain NIAKO_RS35600 SM00862 Transcriptional regulatory protein, C terminal NIAKO_RS35605 SM00028 Tetratricopeptide repeats NIAKO_RS35645 SM00867 YceI-like domain NIAKO_RS35650 SM00867 YceI-like domain NIAKO_RS35660 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. NIAKO_RS35710 SM00420 helix_turn_helix, Deoxyribose operon repressor NIAKO_RS35710 SM01134 NIAKO_RS35710 NIAKO_RS35725 SM00812 Alpha-L-fucosidase NIAKO_RS35785 SM00812 Alpha-L-fucosidase NIAKO_RS35790 SM00812 Alpha-L-fucosidase NIAKO_RS35800 SM01217 NIAKO_RS35800 NIAKO_RS35835 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS35855 SM00354 helix_turn _helix lactose operon repressor NIAKO_RS35890 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase NIAKO_RS35925 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins NIAKO_RS35940 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins NIAKO_RS35945 SM00487 DEAD-like helicases superfamily NIAKO_RS35945 SM00490 helicase superfamily c-terminal domain NIAKO_RS35965 SM00387 Histidine kinase-like ATPases NIAKO_RS35965 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS36000 SM00740 NIAKO_RS36000 NIAKO_RS36040 SM00842 Cell division protein FtsA NIAKO_RS36045 SM00864 Tubulin/FtsZ family, GTPase domain NIAKO_RS36045 SM00865 Tubulin/FtsZ family, C-terminal domain NIAKO_RS36060 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS36155 SM01211 NIAKO_RS36155 NIAKO_RS36230 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS36275 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) NIAKO_RS36275 SM00091 PAS domain NIAKO_RS36275 SM00387 Histidine kinase-like ATPases NIAKO_RS36275 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS36280 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS36285 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NIAKO_RS36315 SM00448 cheY-homologous receiver domain NIAKO_RS36340 SM00636 NIAKO_RS36340 NIAKO_RS36355 SM00606 Cellulose Binding Domain Type IV NIAKO_RS36355 SM00636 NIAKO_RS36355 NIAKO_RS36360 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins NIAKO_RS36360 SM00495 Chitin-binding domain type 3 NIAKO_RS36360 SM00636 NIAKO_RS36360 NIAKO_RS36370 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS36375 SM00458 Ricin-type beta-trefoil NIAKO_RS36405 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS36415 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) NIAKO_RS36415 SM00091 PAS domain NIAKO_RS36415 SM00387 Histidine kinase-like ATPases NIAKO_RS36415 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS36415 SM00448 cheY-homologous receiver domain NIAKO_RS36430 SM00387 Histidine kinase-like ATPases NIAKO_RS36430 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS36440 SM00646 NIAKO_RS36440 NIAKO_RS36455 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS36460 SM00671 Sel1-like repeats. NIAKO_RS36475 SM00028 Tetratricopeptide repeats NIAKO_RS36515 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins NIAKO_RS36515 SM00635 Bacterial Ig-like domain 2 NIAKO_RS36515 SM00710 Parallel beta-helix repeats NIAKO_RS36525 SM00014 Acid phosphatase homologues NIAKO_RS36560 SM00448 cheY-homologous receiver domain NIAKO_RS36565 SM00448 cheY-homologous receiver domain NIAKO_RS36570 SM00091 PAS domain NIAKO_RS36570 SM00387 Histidine kinase-like ATPases NIAKO_RS36570 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS36590 SM00028 Tetratricopeptide repeats NIAKO_RS36595 SM00028 Tetratricopeptide repeats NIAKO_RS36625 SM00448 cheY-homologous receiver domain NIAKO_RS36630 SM00091 PAS domain NIAKO_RS36630 SM00387 Histidine kinase-like ATPases NIAKO_RS36630 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS36670 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) NIAKO_RS36670 SM00091 PAS domain NIAKO_RS36670 SM00387 Histidine kinase-like ATPases NIAKO_RS36670 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS36675 SM00458 Ricin-type beta-trefoil NIAKO_RS36675 SM00644 NIAKO_RS36675 NIAKO_RS36685 SM00387 Histidine kinase-like ATPases NIAKO_RS36685 SM00448 cheY-homologous receiver domain NIAKO_RS36765 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins NIAKO_RS36830 SM01067 Cellulose binding domain NIAKO_RS36895 SM00448 cheY-homologous receiver domain NIAKO_RS36920 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. NIAKO_RS36920 SM00387 Histidine kinase-like ATPases NIAKO_RS36920 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS36920 SM00448 cheY-homologous receiver domain NIAKO_RS36945 SM00028 Tetratricopeptide repeats NIAKO_RS36950 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS36950 SM00448 cheY-homologous receiver domain NIAKO_RS36970 SM00387 Histidine kinase-like ATPases NIAKO_RS36970 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS36980 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins NIAKO_RS36985 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS37000 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NIAKO_RS37000 SM00387 Histidine kinase-like ATPases NIAKO_RS37000 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS37035 SM00271 DnaJ molecular chaperone homology domain NIAKO_RS37080 SM00247 Beta/gamma crystallins NIAKO_RS37115 SM00220 Serine/Threonine protein kinases, catalytic domain NIAKO_RS37120 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS37130 SM00606 Cellulose Binding Domain Type IV NIAKO_RS37150 SM00644 NIAKO_RS37150 NIAKO_RS37160 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS37170 SM00091 PAS domain NIAKO_RS37170 SM00387 Histidine kinase-like ATPases NIAKO_RS37170 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS37175 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. NIAKO_RS37175 SM00382 ATPases associated with a variety of cellular activities NIAKO_RS37185 SM00387 Histidine kinase-like ATPases NIAKO_RS37185 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS37185 SM00448 cheY-homologous receiver domain NIAKO_RS37230 SM00487 DEAD-like helicases superfamily NIAKO_RS37230 SM00490 helicase superfamily c-terminal domain NIAKO_RS37240 SM00047 Lysozyme subfamily 2 NIAKO_RS37240 SM00257 Lysin motif NIAKO_RS37280 SM00422 helix_turn_helix, mercury resistance NIAKO_RS37285 SM00387 Histidine kinase-like ATPases NIAKO_RS37285 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS37290 SM00342 helix_turn_helix, arabinose operon control protein NIAKO_RS37310 SM00060 Fibronectin type 3 domain NIAKO_RS37325 SM00530 Helix-turn-helix XRE-family like proteins NIAKO_RS37335 SM00530 Helix-turn-helix XRE-family like proteins NIAKO_RS37385 SM00387 Histidine kinase-like ATPases NIAKO_RS37385 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS37390 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) NIAKO_RS37390 SM00091 PAS domain NIAKO_RS37390 SM00387 Histidine kinase-like ATPases NIAKO_RS37390 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS37390 SM00448 cheY-homologous receiver domain NIAKO_RS37460 SM00091 PAS domain NIAKO_RS37460 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NIAKO_RS37460 SM00387 Histidine kinase-like ATPases NIAKO_RS37460 SM00388 His Kinase A (phosphoacceptor) domain NIAKO_RS37495 SM00850 LytTr DNA-binding domain NIAKO_RS37510 SM00606 Cellulose Binding Domain Type IV